ID:

eca-mir-1468

 Coordinate:

chrX:46452199-46452284 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-40.6 -40.5 -40.5

Sense Strand Reads

AAATGTGCTAGCCTGGGTTGCATTACCCAGAACTAGGGGCATCATGAAAAGGTGGGTGGTTTCTCCGTTTGCCTGTTTTGCTGATGTTCTTTTGATTCATTCTCAGCAAAATAAGCAAATGGAAAATTCATCCATCAACAAGCTACCTTTAATAAACTTAAGAGTGTGCGGGAGAATCCTGAAATG

***********************************((((.....((....(((((((((.((.(((((((((.(((((((((((((.((....))..))...))))))))))).))))))))).)).)))))))))..)).....))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..............................................................CTCCGTTTGCCTGTTTTGCTGA...................................................................................................... 22 0 1 582.00 582 582
..............................................................CTCCGTTTGCCTGTTTTGCTG....................................................................................................... 21 0 1 48.00 48 48
..............................................................CTCCGTTTGCCTGTTTTGCTGAA..................................................................................................... 23 1 1 37.00 37 37
..............................................................CTCCGTTTGCCTGTTTTGCT........................................................................................................ 20 0 1 14.00 14 14
..............................................................CTCCGTTTGCCTGTTTTGCTGT...................................................................................................... 22 1 1 12.00 12 12
..............................................................CTCCGTTTGCCTGTTTTGCTA....................................................................................................... 21 1 1 11.00 11 11
..............................................................CTCCGTTTGCCTGTTTTGCTGG...................................................................................................... 22 1 1 11.00 11 11
..............................................................CTCCGTTTGCCTGTTTTGCTGAAA.................................................................................................... 24 2 1 5.00 5 5
..............................................................CTCCGTTTGCCTGTTTTGCTAA...................................................................................................... 22 1 1 4.00 4 4
..............................................................CTCCGTTTGCCTGTTTTGCTGC...................................................................................................... 22 1 1 4.00 4 4
..............................................................CTCCGTTTGCCTGTTTGGCTGA...................................................................................................... 22 1 1 3.00 3 3
..............................................................CTCCGTTTGCCGGTTTTGCTGA...................................................................................................... 22 1 1 3.00 3 3
..............................................................CTCCGTTTGCCTGTTTTGC......................................................................................................... 19 0 1 3.00 3 3
..............................................................TTCCGTTTGCCTGTTTTGCTGA...................................................................................................... 22 1 1 2.00 2 2
..............................................................CTCCGTTTGCCTGTGTGGCTGA...................................................................................................... 22 2 1 2.00 2 2
..............................................................CTCCGTTTGCCTGTTTTGCGGA...................................................................................................... 22 1 1 2.00 2 2
..............................................................CTCCGTTTGCCAGTTTTGCTGA...................................................................................................... 22 1 1 2.00 2 2
..............................................................CTCCGTTTGCCTGTGTTGCTGA...................................................................................................... 22 1 1 2.00 2 2
..............................................................CTCCGTTTGCCTGTTTTGCTGAT..................................................................................................... 23 0 1 1.00 1 1
..............................................................CTCCGTTTGCCTGTTTTGCTGGA..................................................................................................... 23 2 1 1.00 1 1
..............................................................CTCCGTTTGCCCGTTTTGCTGA...................................................................................................... 22 1 1 1.00 1 1
..............................................................CTCCGTTTGCCTGTGTTGCT........................................................................................................ 20 1 1 1.00 1 1
..............................................................CTCCGTTTGCCTGTTTTGTTGA...................................................................................................... 22 1 1 1.00 1 1
...............................................................TCCGTTTGCCTGTTTTGCTGA...................................................................................................... 21 0 1 1.00 1 1
..............................................................CTCCGTTTGCCTGTTTTG.......................................................................................................... 18 0 1 1.00 1 1
..............................................................CTCCGTTTGCCGGTTTTGCTGAA..................................................................................................... 23 2 1 1.00 1 1
..............................................................CTCCGTTTGCCTGTGTAGCTGA...................................................................................................... 22 2 1 1.00 1 1
..............................................................CTCCGTTTGCCTGTTTTGCTT....................................................................................................... 21 1 1 1.00 1 1
..............................................................CTCCGTTTGCCTGTTTGGCTGAA..................................................................................................... 23 2 1 1.00 1 1
..............................................................CTCCGTCTGCCTGTTTTGCTGA...................................................................................................... 22 1 1 1.00 1 1
..............................................................ATCCGTTTGCCTGTTTTGCTGA...................................................................................................... 22 1 1 1.00 1 1
..............................................................CTCCGTTTGCCTGTTTCGCTGAA..................................................................................................... 23 2 1 1.00 1 1
..............................................................CTCCGTTTGGCTGTTTTGCTGA...................................................................................................... 22 1 1 1.00 1 1
..............................................................CTCCGTATGGCTGTTTTGCCGAT..................................................................................................... 23 3 1 1.00 1 1
..............................................................CGCCGTTTGCCTGTTTTGCTGA...................................................................................................... 22 1 1 1.00 1 1
..............................................................CTCCGTTTGCCTGTTTTGCAGAA..................................................................................................... 23 2 2 0.50 1 1
..............................................................CTCCGTTTGCCTGTTTTGCAA....................................................................................................... 21 2 8 0.38 3 3
..............................................................CTCCGTCTGGCTGTTTTGCTGA...................................................................................................... 22 2 3 0.33 1 1
..............................................................CTCCGTTTGCCTGTTTTGA......................................................................................................... 19 1 3 0.33 1 1
..............................................................CTCCGTTTGCCTGTTTTGCTTT...................................................................................................... 22 2 3 0.33 1 1
..............................................................CTCCGTTTGCCTGTTTTGCTAGA..................................................................................................... 23 3 6 0.33 2 2

Anti-sense strand reads

TTTACACGATCGGACCCAACGTAATGGGTCTTGATCCCCGTAGTACTTTTCCACCCACCAAAGAGGCAAACGGACAAAACGACTACAAGAAAACTAAGTAAGAGTCGTTTTATTCGTTTACCTTTTAAGTAGGTAGTTGTTCGATGGAAATTATTTGAATTCTCACACGCCCTCTTAGGACTTTAC

***********************************((((.....((....(((((((((.((.(((((((((.(((((((((((((.((....))..))...))))))))))).))))))))).)).)))))))))..)).....))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:11 PM