ID:

eca-mir-138-2

Coordinate:

chr16:42248842-42248900 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

-45.5	-44.9

mature

star

Sense Strand Reads

CCACCACCATCAGCCGTCCCAGAGACCTCCCTGGCATGGTGCGGTGGGGCAGCTGGTGTTGTGAATCAGGCCGTTGCCAATCAGAGAACGGCTACTTCACAACACCAGGGTCACACCCAACCACAAGCAGCGCTCCAGGCACCAGCGCAGCCAAGCCTC *********************************.((((..((((.(((..(((((((((((((...(((((((...........)))))))..))))))))))))).))).))))..)))).*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR871532 testes
..................................................AGCTGGTGTTGTGAATCAGGCCG......................................................................................	23	0	2	6.00	12	12
...............................................................................................................CACACCCAACCACAAGCAGCGCTCCAGGC...................	29	0	1	2.00	2	2
..................................................AGCTGGTGTTGTGAATCAGGCCGTA....................................................................................	25	1	1	2.00	2	2
..................................................AGCTGGTGTTGTGAATCAGGCCGT.....................................................................................	24	0	1	1.00	1	1
..................................................AGCTGGTGTTGTGAATCAGGC........................................................................................	21	0	2	1.00	2	2
..................................................AGCTGGTGTTGTGAATCAGGCCGTAT...................................................................................	26	2	1	1.00	1	1
..................................................CGCTGGTGTTGTGGATCAGGCCG......................................................................................	23	2	2	0.50	1	1
..................................................AGCTGGTGTTGGGAATCAGGCCG......................................................................................	23	1	2	0.50	1	1
..................................................AGCTGGTGTTGTGAATCAGGCCGTAGA..................................................................................	27	2	2	0.50	1	1
..................................................CGCTGGTGTTGTGAATCAGGCCG......................................................................................	23	1	2	0.50	1	1
..................................................AGCTGGTGTTGTGAATCAGGCCGGAT...................................................................................	26	3	2	0.50	1	1

Anti-sense strand reads

GGTGGTGGTAGTCGGCAGGGTCTCTGGAGGGACCGTACCACGCCACCCCGTCGACCACAACACTTAGTCCGGCAACGGTTAGTCTCTTGCCGATGAAGTGTTGTGGTCCCAGTGTGGGTTGGTGTTCGTCGCGAGGTCCGTGGTCGCGTCGGTTCGGAG *********************************.((((..((((.(((..(((((((((((((...(((((((...........)))))))..))))))))))))).))).))))..)))).*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total

Generated: 09/01/2015 at 11:45 AM