ID:

eca-mir-132

 Coordinate:

chr11:45639836-45639901 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-35.5 -35.2 -35.0

Sense Strand Reads

GGAGCTGCCGCGACGCCGTCAGCAGCGCACGCCCCGCCCCCGCGTCTCCAGGACAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGCGCCGCGCCACGCCGCGCACTGCCAGCCCGAGAAG

****************************************.((((((...((...(((((((((...((((((((((.(((...)))..))))))))))...)))))))))...))...)).))))..************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...........................................................................................TAACAGTCTACAGCCATGGTCGT.................................................... 23 1 1 44.00 44 44
...........................................................................................TAACAGTCTACAGCCATGGTCG..................................................... 22 0 1 43.00 43 43
...........................................................................................TAACAGTCTACAGCCATGGTC...................................................... 21 0 1 30.00 30 30
...........................................................................................TAACAGTCTACAGCCATGGTCT..................................................... 22 1 1 9.00 9 9
...........................................................................................TAACAGTCTACAGCCATGGTCC..................................................... 22 1 1 7.00 7 7
.......................................................ACCGTGGCTTTCGATTGTTACT......................................................................................... 22 0 1 6.00 6 6
.....................................CCCCGCGTCTCCAGGACA............................................................................................................... 18 0 1 3.00 3 3
...........................................................................................TAACAGTCTACAGCCATGGT....................................................... 20 0 1 3.00 3 3
...........................................................................................TAACAGTCTACAGCCATGGTCGTT................................................... 24 2 1 3.00 3 3
......................................................AACCGTGGCTTTCGATTGT............................................................................................. 19 0 1 2.00 2 2
......................................................AACCGTGGCTTTCGATTGTTAC.......................................................................................... 22 0 1 2.00 2 2
......................................................AACCGTGGCTTTCGATTGTTA........................................................................................... 21 0 1 2.00 2 2
............................................................................................AACAGTCTACAGCCATGGTCGT.................................................... 22 1 1 2.00 2 2
....................................CCCCCGCGTCTCCAGGACA............................................................................................................... 19 0 1 2.00 2 2
...........................................................................................TAACAGTCTACAGCCATGGGCT..................................................... 22 2 1 1.00 1 1
......................................CCCGCGTCTCCAGGACA............................................................................................................... 17 0 2 1.00 2 2
...........................................................................................TAACAGTCTACAGCCAGGGTC...................................................... 21 1 1 1.00 1 1
.......................................................ACCGTGGCTTTCGATTGTTAA.......................................................................................... 21 1 1 1.00 1 1
............................................................................................CACAGTCTACAGCCATGGTCGC.................................................... 22 1 1 1.00 1 1
.............................................................................................ACAGTCTACAGCCATGGTCG..................................................... 20 0 1 1.00 1 1
...........................................................................................TAACAGTCTACAACCATGGTC...................................................... 21 1 1 1.00 1 1
...........................................................................................TAACAGTCTACAGCCATGGTCGATT.................................................. 25 3 1 1.00 1 1
...........................................................................................TAACAGTCTACAGCCATGGTCGAAC.................................................. 25 2 1 1.00 1 1
...........................................................................................TAACAGTCTAAAGCCATGGTCC..................................................... 22 2 1 1.00 1 1
...................................GCCCCCGCGTCTCCAGGAC................................................................................................................ 19 0 1 1.00 1 1
.......................................................ACCGTGGCTTTCGATTGTTACTGTGGGAACC................................................................................ 31 0 1 1.00 1 1
.......................................................ACCGTGGCTTTCGATTGTTACTGTGGGAACT................................................................................ 31 1 1 1.00 1 1
...........................................................................................TAACAGTCTACAGCCAAGGTCGT.................................................... 23 2 1 1.00 1 1
...........................................................................................TAACAGTCTACAGCCATGGTCAT.................................................... 23 2 1 1.00 1 1
.......................................................ACCGTGGCTTTCGATTGTTAC.......................................................................................... 21 0 1 1.00 1 1
...........................................................................................TAACAGTCTACAGCCATGGTCGTACT................................................. 26 3 1 1.00 1 1
.....................................................................................CCGTGGTAACAGTCTACAGCCATGGTCGC.................................................... 29 2 1 1.00 1 1
...........................................................................................TAACAGTCTACAGCCATGGTCTT.................................................... 23 2 1 1.00 1 1
...........................................................................................TAACAGTCTACAGCCATGGTCGTAC.................................................. 25 2 1 1.00 1 1
...........................................................................................TAACAGTCTACAGCCATGGTCGG.................................................... 23 1 1 1.00 1 1
.............................................................................................ACAGTCTACAGCCATGGTCGT.................................................... 21 1 1 1.00 1 1
.............................................................................................ACAGTCTACAGCCATGGTCGTTT.................................................. 23 3 2 0.50 1 1
.............................................................................................CCAGTCTACAGCCATGGTCGTA................................................... 22 3 3 0.33 1 1

Anti-sense strand reads

CCTCGACGGCGCTGCGGCAGTCGTCGCGTGCGGGGCGGGGGCGCAGAGGTCCTGTTGGCACCGAAAGCTAACAATGACACCCTTGGCCTCCATTGTCAGATGTCGGTACCAGCGGGGCGTCGTGCGGGTGCGCGGCGCGGTGCGGCGCGTGACGGTCGGGCTCTTC

**************************************.((((((...((...(((((((((...((((((((((.(((...)))..))))))))))...)))))))))...))...)).))))..**************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:36 AM