ID:

eca-mir-1302e-7

 Coordinate:

chr13:35262224-35262278 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

ttttTtgtGGtTGgggtGTTtttTTTGttTTTgtGtTtttgttTGttTgtTTTTTTtGTtTtGGTtTGTgggtTGgttTGTTTGGGtTtTtgTTtTtgTtttttttttTTGTTGTTGTTTttTgTGttGTTgtgtTTTttgTGtGTgTggTGgtT

***********************************.....................................................................................*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Anti-sense strand reads

ttttAtgtCCtACgggtCAAtttAAACttAAAgtCtAtttgttACttAgtAAAAAAtCAtAtCCAtACAgggtACgttACAAACCCtAtAtgAAtAtgAtttttttttAACAACAACAAAttAgACttCAAgtgtAAAttgACtCAgAggACgtA

***********************************.....................................................................................*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.........CTACGGGTCAATTTAAACTTAAAGTCTATT.................................................................................................................... 30 0 20 0.15 3 3
........CCTACGGGTCAATTTAAACTTAAAGTCT....................................................................................................................... 28 0 20 0.10 2 2
.....TGTCCTACGGGTCAATTTAAACTTAAAGTCT....................................................................................................................... 31 0 20 0.10 2 2
......GTCCTACGGGTCAATTTAAACTTAAAGTCT....................................................................................................................... 30 0 20 0.05 1 1
.........CTACGGGTCAATTTAAACTTAAAGTCTAT..................................................................................................................... 29 0 20 0.05 1 1
............CGGGTCAATTTAAACTTAAAGTCTAT..................................................................................................................... 26 0 20 0.05 1 1
............CGGGTCAATTTAAACTTAAAGTCTATT.................................................................................................................... 27 0 20 0.05 1 1
.........CTACGGGTCAATTTAAACTTAAAGTCTATTT................................................................................................................... 31 0 20 0.05 1 1

Generated: 09/01/2015 at 11:39 AM