ID:

eca-mir-1264

 Coordinate:

chrX:90707867-90707935 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-35.9 -35.9
mature

star

  1. chr3:4009488-4009509 +
  2. eca-mir-1264  chrX:90707867-90707888 +

Sense Strand Reads

AAGTCTAAATATATTCAACACATTGtgtttcttcatgcctggcatatagcaggtcctcaataagtatttgttgaaagaataaatGAACCAACAAGTCTTATTTGAGCACCTGTTATGTGGAGGATAAAAAACTACGACTCAGACAGAGCTTATGATCTAATATGGGAGA

***********************************..(((..((((((((((((.(((((((((.((((((((...............)))))))))))).))))).)))))))))))).)))....****************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................ACAAGTCTTATTTGAGCACCTG......................................................... 22 0 1 2.00 2 2
...........................................................................................CAAGTCTTATTTGAGCACCTG......................................................... 21 0 1 2.00 2 2
..................................................AGGTCCTCAATAAGTATTTGTT................................................................................................. 22 0 2 1.50 3 3
...........................................................................................CAAGTCTTATTTGAGCACCGGT........................................................ 22 1 1 1.00 1 1
..........................................................................................CCAAGTCTTATTTGAGCACCTG......................................................... 22 1 1 1.00 1 1
...........................................................................................CAAGTCTTATTTGAGCACCTGT........................................................ 22 0 1 1.00 1 1
...........................................................................................CAAGTCTTATTTGAGCACCTGTTT...................................................... 24 1 1 1.00 1 1

Anti-sense strand reads

TTCAGATTTATATAAGTTGTGTAACtgtttGttGTtgGGtggGTtTtTgGTggtGGtGTTtTTgtTtttgttgTTTgTTtTTTtCTTGGTTGTTCAGAATAAACTCGTGGACAATACACCTCCTATTTTTTGATGCTGAGTCTGTCTCGAATACTAGATTATACCCTCT

******************************************..(((..((((((((((((.(((((((((.((((((((...............)))))))))))).))))).)))))))))))).)))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:13 PM