ID:

eca-mir-1261

 Coordinate:

chr3:90276715-90276799 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

agcttcctcacttctctcAGCCTTCCTAGAATTGAAGGGAGTTAGGGCCGTGCTGTGGATTAGGCTTTGGCTTAAGGGAATATTGTGGCTGATTTGATCTTCTATCCAGACCACTGAAGCTTTCTCCATATCAGCAGTAAGTCTGTATCACTTTCTCATTATTTCTGTGTTCACTGCAGTAGCAT

***********************************...((....((((..(((((((((..(((((((((......(((......(((..(((...)))..))))))......)))))))))..))))...)))))....))))...)).*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..............................................................................................TGATCTTCTATCCAGACCACTGAAGCTGTAT............................................................ 31 2 5 0.20 1 1
..........................TAGAATTGAAGAGAGTTAGGGCCG....................................................................................................................................... 24 1 20 0.05 1 1
..........................TAGAATTGAAGAGAGTTAGGGCCGTGCT................................................................................................................................... 28 1 20 0.05 1 1

Anti-sense strand reads

TgGttGGtGTGttGtGtGTCGGAAGGATCTTAACTTCCCTCAATCCCGGCACGACACCTAATCCGAAACCGAATTCCCTTATAACACCGACTAAACTAGAAGATAGGTCTGGTGACTTCGAAAGAGGTATAGTCGTCATTCAGACATAGTGAAAGAGTAATAAAGACACAAGTGACGTCATCGTA

***********************************...((....((((..(((((((((..(((((((((......(((......(((..(((...)))..))))))......)))))))))..))))...)))))....))))...)).*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:59 AM