ID:

eca-mir-1197

 Coordinate:

chr24:42898113-42898232 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-23.4 -23.4 -23.2

Sense Strand Reads

AATTCATGATGCACATTGCAAGGGCTTCCTGGAGGCAATACCAAATTAAGGGGAGAGAGGCTGGGTCAGCGTCACTTCATGGTATTTGAAGATGCGGTTGACCATGCTGTGTACGCTTTATTTATGACGTAGGACACATGGTCTACTTCTCCTCAATATCACATCTCGCCTTGGAAGACTTCCAGGAGGTGATATCAGCTTTGAGGAAGAGCCACTGTCC

******************************************************************************.(((((((.((.((...(((.(((((((.(((.((((.((.......))))))..)))))))))).)))..)).)))))))))....******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.................................................................................................................................TAGGACACATGGTCTACTTCT...................................................................... 21 0 1 19.00 19 19
.............................................................................................GCGGTTGACCATGCTGTGTACG......................................................................................................... 22 0 1 1.00 1 1
.................................................................................................................................TAGGACACATGGTCTACTTCA...................................................................... 21 1 1 1.00 1 1
...........................................................................................................TGTGTACGCTTTATTTATGACGTAGGACACATGGTC............................................................................. 36 0 1 1.00 1 1

Anti-sense strand reads

TTAAGTACTACGTGTAACGTTCCCGAAGGACCTCCGTTATGGTTTAATTCCCCTCTCTCCGACCCAGTCGCAGTGAAGTACCATAAACTTCTACGCCAACTGGTACGACACATGCGAAATAAATACTGCATCCTGTGTACCAGATGAAGAGGAGTTATAGTGTAGAGCGGAACCTTCTGAAGGTCCTCCACTATAGTCGAAACTCCTTCTCGGTGACAGG

*******************************************************.(((((((.((.((...(((.(((((((.(((.((((.((.......))))))..)))))))))).)))..)).)))))))))....****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:54 AM