ID:

eca-let-7f

 Coordinate:

chr23:54150758-54150844 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-46.5 -46.3 -46.3
mature

  1. eca-let-7f  chr23:54150817-54150838 -
  2. chrX:44775686-44775707 +
star

Sense Strand Reads

TTCCTTTTGAAATAGATGTGCTCTCCGTTCCAGAAGAAAAGATTGCTCTGTCGGAGTGAGGTAGTAGATTGTATAGTTGTGGGGTAGTGATTTTACCCTGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGAGGAGTGGACTTGCTGCATTTTGTTTTTATCTAGATAGTATTAAAACTCAG

*****************************************.(((((((.((((...((((((((((((((((((((((((((((((.....))))))).........)))))))))))))))))))))))..)))))))))))....*************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
........................................................TGAGGTAGTAGATTGTATAGTT............................................................................................................. 22 0 2 17008.50 34017 34017
........................................................TGAGGTAGTAGATTGTATAGT.............................................................................................................. 21 0 2 5323.00 10646 10646
........................................................TGAGGTAGTAGATTGTATAGTTA............................................................................................................ 23 1 2 1114.00 2228 2228
........................................................TGAGGTAGTAGATTGTATAG............................................................................................................... 20 0 2 577.00 1154 1154
........................................................TGAGGTAGTAGATTGTATA................................................................................................................ 19 0 2 179.00 358 358
........................................................TGAGGTAGTAGATTGTATAGTA............................................................................................................. 22 1 2 159.50 319 319
........................................................TGAGGTAGTAGATTGTAT................................................................................................................. 18 0 2 151.00 302 302
........................................................TGAGGTAGTAGATTGTATAGA.............................................................................................................. 21 1 2 103.50 207 207
........................................................TGAGGTAGTAGATTGTATAGTTG............................................................................................................ 23 0 1 101.00 101 101
........................................................TGAGGTAGTAGATTGTATAGTG............................................................................................................. 22 1 2 93.50 187 187
........................................................TGAGGTAGTAGATTGTATAATT............................................................................................................. 22 1 2 88.00 176 176
........................................................TGAGGTAGTAGATTGTGTAGTT............................................................................................................. 22 1 2 79.50 159 159
........................................................TGAGGTAGTAGAGTGTATAGTT............................................................................................................. 22 1 2 72.50 145 145
........................................................TGAGGTAGTAGATTGTA.................................................................................................................. 17 0 3 70.67 212 212
........................................................TGAGGTAGTAGATTGTATAGTC............................................................................................................. 22 1 2 69.00 138 138
........................................................TGAGGTAGTGGATTGTATAGTT............................................................................................................. 22 1 2 41.50 83 83
........................................................TGAGGTAGTAGATTGTATAAT.............................................................................................................. 21 1 2 29.00 58 58
........................................................TGAGGTAGTAGATTGTGTAGT.............................................................................................................. 21 1 2 28.50 57 57
........................................................TGAGGTAGTAGATTGTATAA............................................................................................................... 20 1 2 27.50 55 55
........................................................TGAGGTAGTAGGTTGTATAGTTG............................................................................................................ 23 1 5 25.40 127 127
................................................................................................................CTATACAATCTATTGCCTTCCT..................................................... 22 1 1 25.00 25 25
........................................................TGAGGTAGTAGATTGTATACTT............................................................................................................. 22 1 2 24.50 49 49
........................................................TGAGGTAGTAGAGTGTATAGT.............................................................................................................. 21 1 2 24.00 48 48
........................................................TGAGGTGGTAGATTGTATAGTT............................................................................................................. 22 1 2 23.50 47 47
........................................................TGAGGTAGTAGATTGTATAGTAA............................................................................................................ 23 2 2 23.00 46 46
........................................................TGAGGTAGTAGAATGTATAGTT............................................................................................................. 22 1 2 19.00 38 38
........................................................TGAGGTAGTAGATTGTATAGTTAA........................................................................................................... 24 2 3 18.67 56 56
........................................................TGAGGGAGTAGATTGTATAGTT............................................................................................................. 22 1 2 18.00 36 36
........................................................TGAGGTAGTAGATTGTATAGTTAT........................................................................................................... 24 1 2 17.00 34 34
........................................................TGAGGTAGTAGATTGTATAGTTGTGGGGT...................................................................................................... 29 0 1 16.00 16 16
........................................................TGAGGTAGTGGATTGTATAGT.............................................................................................................. 21 1 2 14.50 29 29
.......................................................CTGAGGTAGTAGATTGTATAGTT............................................................................................................. 23 1 2 14.00 28 28
........................................................TGAGGTAGTAGATTGTATATTT............................................................................................................. 22 1 2 14.00 28 28
........................................................TGAGGTAGTGGATTGTATAATT............................................................................................................. 22 2 2 11.00 22 22
........................................................TGAGGTAGTAGACTGTATAGTT............................................................................................................. 22 1 2 10.50 21 21
........................................................TGAGGAAGTAGATTGTATAGTT............................................................................................................. 22 1 2 10.50 21 21
........................................................TGAGGTAGTAGATTATATAGTT............................................................................................................. 22 1 2 10.50 21 21
........................................................TGAGGTCGTGGATTGTATAGTT............................................................................................................. 22 2 2 10.00 20 20
........................................................GGAGGTAGTAGATTGTATAGTT............................................................................................................. 22 1 2 9.00 18 18
........................................................TGAGGTAGTAGATTGTTTAGTT............................................................................................................. 22 1 2 9.00 18 18
........................................................TGAGGTAGTAGATTGTATACT.............................................................................................................. 21 1 2 9.00 18 18
........................................................TGAGGTAGTAGATTGTCTAGTT............................................................................................................. 22 1 2 9.00 18 18
........................................................TGAGGTGGTGGATTGTATAGTT............................................................................................................. 22 2 4 8.75 35 35
........................................................TGAGGTAGTCGATTGTATAGTT............................................................................................................. 22 1 2 8.50 17 17
........................................................TGAGGTAGTAGATTGTAAA................................................................................................................ 19 1 2 8.50 17 17
........................................................TGAGGTAGTAGATTGTATAT............................................................................................................... 20 1 2 8.50 17 17
........................................................TGAGGTAGTAGAATGTATAGT.............................................................................................................. 21 1 2 8.00 16 16
........................................................TGAGGTCGTAGATTGTATAGTT............................................................................................................. 22 1 2 8.00 16 16
.........................................................GAGGTAGTAGATTGTATAGTT............................................................................................................. 21 0 2 7.50 15 15
........................................................TGAGGTAGTAGATTGTATATT.............................................................................................................. 21 1 2 7.50 15 15
........................................................TGAGGTAGTAGATTGTATAGTTGT........................................................................................................... 24 0 1 7.00 7 7
........................................................TGAGGTGGTAGATTGTATAGT.............................................................................................................. 21 1 2 7.00 14 14
........................................................TGAGGCAGTAGATTGTATAGTT............................................................................................................. 22 1 2 7.00 14 14
........................................................TGAGGTAGTAGATTGTATGGTT............................................................................................................. 22 1 3 6.67 20 20
........................................................TGAGGTAGTAGATTGTATAATTA............................................................................................................ 23 2 2 6.50 13 13
........................................................TGAGGTAGTAAATTGTATAGTT............................................................................................................. 22 1 2 6.50 13 13
........................................................TGAGGTAGTAGATTGTGTAGTTA............................................................................................................ 23 2 2 6.00 12 12
........................................................TGAGGTAGTAGATTGTATAGTCA............................................................................................................ 23 2 3 5.67 17 17
........................................................TGAGGTAGTAGCTTGTATAGTT............................................................................................................. 22 1 5 5.60 28 28
........................................................TGAGGTAGTAGATTGTATAGTGA............................................................................................................ 23 2 2 5.50 11 11
.......................................................CTGAGGTAGTAGATTGTATAGT.............................................................................................................. 22 1 2 5.50 11 11
........................................................TGAGGTAGTAGGTTGTATAGTTGT........................................................................................................... 24 1 2 5.50 11 11
........................................................TGAGGTAGTAGATTGTATAGTTC............................................................................................................ 23 1 2 5.00 10 10
........................................................CGAGGTAGTAGATTGTATAGTT............................................................................................................. 22 1 2 5.00 10 10
........................................................TGAGGTAGTAGATTGTATAGTTGTGGGGTA..................................................................................................... 30 0 1 5.00 5 5
........................................................TGAGGTAGTAGTTTGTACAGTTGT........................................................................................................... 24 2 2 5.00 10 10
........................................................TGAGGTAGTAGATTGTATAGTTGTGGGGTT..................................................................................................... 30 1 1 5.00 5 5
........................................................TGAGGTAGTAGAGTGTATAGTTA............................................................................................................ 23 2 2 5.00 10 10
........................................................TGAGGTAGTAGATTGTATAAA.............................................................................................................. 21 2 5 4.60 23 23
........................................................TGAGGTAGTAGACTGTATAGT.............................................................................................................. 21 1 2 4.50 9 9
........................................................TGAGGTAGTAGATTCTATAGTT............................................................................................................. 22 1 2 4.50 9 9
........................................................TGAGGTAGTTGATTGTATAGTT............................................................................................................. 22 1 2 4.50 9 9
........................................................TGAGGTAGTAGATTGTATT................................................................................................................ 19 1 3 4.33 13 13
........................................................TGAGGTAGTAGTTTGTATAGTT............................................................................................................. 22 1 6 4.17 25 25
........................................................TGAGGTAGTAGATTGTCTAGT.............................................................................................................. 21 1 2 4.00 8 8
........................................................TGAGGTAGTAGATTGTATAGTTGTGGT........................................................................................................ 27 1 1 4.00 4 4
........................................................TGAGGTAGTCGATTGTATAATT............................................................................................................. 22 2 2 4.00 8 8
........................................................AGAGGTAGTAGATTGTATAGTT............................................................................................................. 22 1 2 4.00 8 8
.............................................................TAGTAGATTGTATAGTTGTGGGGT...................................................................................................... 24 0 1 4.00 4 4
........................................................TGAGGTAGTAGATTGTATAGAA............................................................................................................. 22 2 4 4.00 16 16
........................................................TGAGGTAGTTGATTGTATAGT.............................................................................................................. 21 1 2 4.00 8 8
........................................................TGAGGTAGTAGATTGTATAGAT............................................................................................................. 22 1 2 3.50 7 7
........................................................TAAGGTAGTAGATTGTATAGTT............................................................................................................. 22 1 2 3.50 7 7
........................................................TGAGGTAGTAGATTGT................................................................................................................... 16 0 3 3.33 10 10
........................................................TGAGGTAGTAGATTGTACAGTT............................................................................................................. 22 1 3 3.33 10 10
........................................................TGAGGTAGTAGATTCTATAGT.............................................................................................................. 21 1 2 3.00 6 6
........................................................TGAGGTCGTCGATTGTATAGTT............................................................................................................. 22 2 2 3.00 6 6
.............................................................TAGTAGATTGTATAGTTGTGGGA....................................................................................................... 23 1 1 3.00 3 3
........................................................TGAGGTAGTAAATTGTATAGT.............................................................................................................. 21 1 2 3.00 6 6
........................................................TGAGGTCGTAGATTGTATAGT.............................................................................................................. 21 1 2 3.00 6 6
........................................................TGAGGTAGTAGATTGTATAGTTGTGGGGTAGT................................................................................................... 32 0 1 3.00 3 3
........................................................TGAGGTAGTAGATTATATAGT.............................................................................................................. 21 1 2 3.00 6 6
........................................................TGAGGTAGTAGATTGTATAGTAG............................................................................................................ 23 1 1 3.00 3 3
....................................AAAAGATTGCTCTGTCGGAG................................................................................................................................... 20 0 1 3.00 3 3
........................................................TGAGGGAGTAGATTGTATAGT.............................................................................................................. 21 1 2 3.00 6 6
........................................................TGAGGTAGTAGAATGTATAGTTA............................................................................................................ 23 2 2 3.00 6 6
........................................................TGAGGTAGTAGATTGTATAGTTGTGGG........................................................................................................ 27 0 1 3.00 3 3
........................................................TGAGGTAGTAGGTTGTATGGTTGT........................................................................................................... 24 2 4 2.75 11 11
.........................................................GAGGTAGTAGATTGTATAGT.............................................................................................................. 20 0 2 2.50 5 5
........................................................TGAGGTGGTCGATTGTATAGT.............................................................................................................. 21 2 2 2.50 5 5
........................................................TCAGGTAGTAGATTGTATAGTT............................................................................................................. 22 1 2 2.50 5 5
........................................................TGAGGTAGTGGATTGTATACTT............................................................................................................. 22 2 2 2.50 5 5
........................................................TGAGGTAGTCGATTGTATAGT.............................................................................................................. 21 1 2 2.50 5 5
........................................................TGAGGTAGTAGATTGTGTAG............................................................................................................... 20 1 2 2.50 5 5
........................................................TGAGGTGGTCGATTGTATAGTT............................................................................................................. 22 2 2 2.50 5 5
........................................................TGAGGTAGTATATTGTATAGTT............................................................................................................. 22 1 2 2.50 5 5
........................................................TGAGGCAGTAGATTGTATAGT.............................................................................................................. 21 1 3 2.33 7 7
.............................................................TAGTAGATTGTATAGTTGTGGGGTAAA................................................................................................... 27 2 1 2.00 2 2
........................................................TGAGGTAGTAGAGTGTATAGTC............................................................................................................. 22 2 2 2.00 4 4
........................................................TGAGGTAGTACATTGTATAGTT............................................................................................................. 22 1 2 2.00 4 4
........................................................AGAGGTAGTAGATTGTATAGT.............................................................................................................. 21 1 3 2.00 6 6
........................................................TGAGGTGGTAGATTGTATAGTTA............................................................................................................ 23 2 3 2.00 6 6
........................................................TGAGGTAGTAGATTGTATAGTGG............................................................................................................ 23 1 1 2.00 2 2
........................................................TGAGGTAGTAAATTGTATAGTTG............................................................................................................ 23 1 1 2.00 2 2
..................................................CCGTGGTGAGGTAGTAGATTGTATAGT.............................................................................................................. 27 3 1 2.00 2 2
........................................................TGAGGTAGTAGATTGTATAGCT............................................................................................................. 22 1 2 2.00 4 4
........................................................TGAGGTAGTAGATTGTAA................................................................................................................. 18 1 7 2.00 14 14
........................................................TGAGGTCGTGGATTGTATAGT.............................................................................................................. 21 2 3 2.00 6 6
........................................................TGAGGTAGTCGATTGTATAAT.............................................................................................................. 21 2 2 2.00 4 4
................................................................................................................CTATACAATCTATTGCCTTCC...................................................... 21 0 1 2.00 2 2
.............................................................TAGTAGATTGTATAGTTGTGGGAA...................................................................................................... 24 2 1 2.00 2 2
........................................................TGAGGTAGTAGATTTTATAGTT............................................................................................................. 22 1 2 2.00 4 4
........................................................TGGGGTAGTAGATTGTATAGTT............................................................................................................. 22 1 2 2.00 4 4
...........................................................GGTAGTAGATTGTATAGTT............................................................................................................. 19 0 2 2.00 4 4
................................................................................................................CTATACAATCTATTGCCTTCCA..................................................... 22 1 1 2.00 2 2
........................................................TGAGGTAGTAGATTGCATAGTT............................................................................................................. 22 1 2 2.00 4 4
........................................................TGAGGTATTAGATTGTATAGTT............................................................................................................. 22 1 2 2.00 4 4
........................................................TGAGGTAGTAGATTGTATAGTTGA........................................................................................................... 24 1 1 2.00 2 2
........................................................TGAGGTGGTGGATTGTATAGT.............................................................................................................. 21 2 6 2.00 12 12
........................................................TGAGGTAGTAGATTATGTAGTT............................................................................................................. 22 2 3 2.00 6 6
.............................................................TAGTAGATTGTATAGTTGTGG......................................................................................................... 21 0 1 2.00 2 2
........................................................TGAGGTAGTAGATTGTATAGTTAG........................................................................................................... 24 2 3 2.00 6 6
........................................................TGAGGTCGTAGATTGTATAGTTA............................................................................................................ 23 2 2 2.00 4 4
........................................................CGAGGTAGTAGATTGTATAGT.............................................................................................................. 21 1 2 2.00 4 4
........................................................GGAGGTAGTAGATTGTATAGT.............................................................................................................. 21 1 2 2.00 4 4
........................................................TGAGGTAGAAGATTGTATAGTT............................................................................................................. 22 1 2 2.00 4 4
........................................................TGAGGTAGTAGATTGTTTAGT.............................................................................................................. 21 1 2 2.00 4 4
........................................................TGAGGTAGTAGATTGTATACTTA............................................................................................................ 23 2 2 2.00 4 4
........................................................TGAGGTAGTAGCTTGTATAGT.............................................................................................................. 21 1 5 1.80 9 9
........................................................TGAGGTAGGAGATTGTATAGTT............................................................................................................. 22 1 3 1.67 5 5
........................................................TGAGGTGGTAGATTGTATAATT............................................................................................................. 22 2 5 1.60 8 8
........................................................TGAGGTAGTTGATTGTATAATT............................................................................................................. 22 2 2 1.50 3 3
........................................................GGAGGTAGTAGATTGTATAGTTA............................................................................................................ 23 2 2 1.50 3 3
........................................................TGTGGTAGTAGATTGTATAGTT............................................................................................................. 22 1 2 1.50 3 3
........................................................TGAGGTAGTAGATTGTATAGGT............................................................................................................. 22 1 2 1.50 3 3
........................................................TGAGGTAGTAGATTGTATAGTAC............................................................................................................ 23 2 2 1.50 3 3
.........................................................GAGGTAGTAGATTGTATAGTTA............................................................................................................ 22 1 2 1.50 3 3
........................................................TGAGGAAGTAGATTGTATAGT.............................................................................................................. 21 1 4 1.50 6 6
........................................................TGAGGTTGTAGATTGTATAGTT............................................................................................................. 22 1 2 1.50 3 3
........................................................TAAGGTAGTAGATTGTATAGT.............................................................................................................. 21 1 2 1.50 3 3
........................................................TGAGTTAGTAGATTGTATAGTT............................................................................................................. 22 1 2 1.50 3 3
........................................................TGAGGTAGCAGATTGTATAGTT............................................................................................................. 22 1 2 1.50 3 3
........................................................TGAGGTATTAGATTGTATAGT.............................................................................................................. 21 1 2 1.50 3 3
............................................................GTAGTAGATTGTATAGTT............................................................................................................. 18 0 2 1.50 3 3
......................................................TCTGAGGTAGTAGATTGTATAGTT............................................................................................................. 24 2 2 1.50 3 3
........................................................TGAGGTAGTAGATTATATAGTTA............................................................................................................ 23 2 2 1.50 3 3
........................................................TGAGGTAGTAGATTGTGTAGTA............................................................................................................. 22 2 2 1.50 3 3
........................................................TGAGGTAGTAGATTGTATAGG.............................................................................................................. 21 1 2 1.50 3 3
........................................................TGAGGTCGTAGATTGTATAATT............................................................................................................. 22 2 2 1.50 3 3
........................................................TGAGGTAGCAGATTGTATAGT.............................................................................................................. 21 1 2 1.50 3 3
........................................................TGAGGTAGTAGATTGTAAAGTT............................................................................................................. 22 1 2 1.50 3 3
........................................................TGAGGTAGTAGATCGTATAGTT............................................................................................................. 22 1 2 1.50 3 3
........................................................TGAGGTAGTAGTTTGTATAGT.............................................................................................................. 21 1 6 1.33 8 8
........................................................TGAGGTAGTGGATTGTATAAT.............................................................................................................. 21 2 3 1.33 4 4
........................................................TGAGGTAGTAGATTG.................................................................................................................... 15 0 4 1.25 5 5
........................................................TGAGGTAGTAGAGTGTATAGTG............................................................................................................. 22 2 3 1.00 3 3
................................GAAGAAAAGATTGCTCTGTCGTAG................................................................................................................................... 24 1 1 1.00 1 1
.............................................................TAGTAGATTGTATAGTTGTGGGGA...................................................................................................... 24 1 1 1.00 1 1
........................................................TGAGGTAGTAGATTGTATAGTTATT.......................................................................................................... 25 2 2 1.00 2 2
........................................................TGAGGTGGTAGATTGTATACTT............................................................................................................. 22 2 3 1.00 3 3
........................................................TGAGGTAGTAGATTGTATAGTTGG........................................................................................................... 24 1 1 1.00 1 1
........................................................TGAGGTAGTAGATAGTATAGTT............................................................................................................. 22 1 2 1.00 2 2
........................................................TGAGGTAGTGGATTGTATAG............................................................................................................... 20 1 2 1.00 2 2
........................................................TGAGGTAGTAGATGGTATAGTT............................................................................................................. 22 1 2 1.00 2 2
........................................................TGCGGTAGTAGATTGTATAGTTG............................................................................................................ 23 1 1 1.00 1 1
........................................................TGAGGTAGTAGATTGTATAGTTGTGGGGG...................................................................................................... 29 1 1 1.00 1 1
........................................................TGAGGTAGTAGATAGTATAGT.............................................................................................................. 21 1 2 1.00 2 2
........................................................TGAGGTAGTAGATTGTGTAGTC............................................................................................................. 22 2 2 1.00 2 2
........................................................TGAGGTAGGAGATTGTATAGT.............................................................................................................. 21 1 3 1.00 3 3
...................................................CGTGGTGAGGTAGTAGATTGTATAGT.............................................................................................................. 26 2 1 1.00 1 1
........................................................TGGGGTAGTAGATTGTATAGT.............................................................................................................. 21 1 2 1.00 2 2
........................................................TGAGGTAGTAGAGTGTATAG............................................................................................................... 20 1 3 1.00 3 3
........................................................TGAGGTAGTAGATTGTATAGTTAC........................................................................................................... 24 2 2 1.00 2 2
........................................................TGAGGTAGAAGATTGTATAGTTGTGGGGT...................................................................................................... 29 1 1 1.00 1 1
........................................................TGAGGTCGTAGATTGTATAAT.............................................................................................................. 21 2 2 1.00 2 2
...................................GAAAAGATTGCTCTGTCGGAG................................................................................................................................... 21 0 1 1.00 1 1
........................................................TGAGGTAGTAGATTGTACAGTTG............................................................................................................ 23 1 1 1.00 1 1
........................................................TGAGGTAGTAGAATGTATAGTTG............................................................................................................ 23 1 1 1.00 1 1
........................................................TGAAGTAGTAGATTGTATAGTT............................................................................................................. 22 1 2 1.00 2 2
........................................................TGAGGTCGTAGATTGTAT................................................................................................................. 18 1 2 1.00 2 2
................................................................................................................CTATACAATCTATTGCCTTCCAA.................................................... 23 2 1 1.00 1 1
...................................................CGTGGTGAGGTGGTAGATTGTATAGTT............................................................................................................. 27 3 1 1.00 1 1
.............................................................TAGTAGATTGTATAGTTGTGGGT....................................................................................................... 23 1 1 1.00 1 1
........................................................TGAGGTAGTAGATTGTATAGC.............................................................................................................. 21 1 2 1.00 2 2
................................................................................................................CTATACAATCTATTGCCTTCCTAG................................................... 24 2 1 1.00 1 1
...................................................CGTGGTGAGGTAGTAGATTGTATAGTT............................................................................................................. 27 2 1 1.00 1 1
........................................................TGAGGTAGTAGATTGTATTGTT............................................................................................................. 22 1 2 1.00 2 2
........................................................TGAGGTGGTAGATTGTATAGTTGTGGG........................................................................................................ 27 1 1 1.00 1 1
.............................................................TAGTAGATTGTATAGTTGTGGG........................................................................................................ 22 0 1 1.00 1 1
........................................................TGAGGTGGTAGATTGTATAGTTG............................................................................................................ 23 1 1 1.00 1 1
........................................................TGAGGTAGTCGATTGTATAGTTA............................................................................................................ 23 2 2 1.00 2 2
...................................................CGTGGTGAGGTAGTAGATTGTATAGTTA............................................................................................................ 28 3 1 1.00 1 1
................................................................................................................CTATACAATCTATTGCCTTCCATT................................................... 24 2 1 1.00 1 1
........................................................TGAGGTAGTGGATTGTATAGTTA............................................................................................................ 23 2 2 1.00 2 2
........................................................TGAGGTAGTAGATTGTATAGTTGTGGGGA...................................................................................................... 29 1 1 1.00 1 1
........................................................TGAGGTAGTAGATTGTATAGTTGTGGGG....................................................................................................... 28 0 1 1.00 1 1
........................................................TGAGGTAGTAGGTTGTATAGTTGTGGGGTA..................................................................................................... 30 1 1 1.00 1 1
........................................................TGAGGTAGTAGATTGTATAC............................................................................................................... 20 1 2 1.00 2 2
.............................................................TAGTAGATTGTATAGTT............................................................................................................. 17 0 2 1.00 2 2
........................................................TGCGGTAGTAGATTGTATAGTT............................................................................................................. 22 1 2 1.00 2 2
........................................................TTAGGTAGTAGATTGTATAGTT............................................................................................................. 22 1 2 1.00 2 2
........................................................TGAGATAGTAGATTGTATAGTT............................................................................................................. 22 1 2 1.00 2 2
........................................................TGAGGTAGTAGATTGTATAGTTGTGGGGTTG.................................................................................................... 31 1 1 1.00 1 1
.............................................................TAGTAGATTGTATAGTTGTGGGGTAGT................................................................................................... 27 0 1 1.00 1 1
..............................................................................GTGGGGTAGTGATTTTACCC......................................................................................... 20 0 1 1.00 1 1
................................GAAGAAAAGATTGCTCTGTCGGAG................................................................................................................................... 24 0 1 1.00 1 1
........................................................TGAGGTAGTAGATTGTGT................................................................................................................. 18 1 3 1.00 3 3
........................................................TGAGGTAGTAGATTGTATAGTTGTGGAT....................................................................................................... 28 2 1 1.00 1 1
........................................................TGAGGTAGTAGATTGTATAGTTGTGG......................................................................................................... 26 0 1 1.00 1 1
........................................................TGAGGTAGTAGATTTTATAGT.............................................................................................................. 21 1 2 1.00 2 2
........................................................TGAGGTAGTAGATTGTATAGTTGTGGA........................................................................................................ 27 1 1 1.00 1 1
........................................................TGAGGTAGTAGATTGTACAGT.............................................................................................................. 21 1 3 1.00 3 3
................................................................................................................CTATACAATCTATTGCCTTCCAGA................................................... 24 3 2 1.00 2 2
........................................................TGAGGTGGTTGATTGTATAGTT............................................................................................................. 22 2 3 0.67 2 2
........................................................TGAGGTAGTAGATTGAATAGT.............................................................................................................. 21 1 3 0.67 2 2
........................................................TGAGGTCGTAGATTGTATACTT............................................................................................................. 22 2 3 0.67 2 2
........................................................TGAGGTAGTAGATTGTTTAGTTA............................................................................................................ 23 2 3 0.67 2 2
........................................................TGAGGTAGTAGATTGTACAG............................................................................................................... 20 1 3 0.67 2 2
........................................................TGAGGTAGTAGATTGTATAAAT............................................................................................................. 22 2 3 0.67 2 2
........................................................TGAGGTAGTAGATTGTATAGTTAAT.......................................................................................................... 25 3 3 0.67 2 2
........................................................TGAGGTAGTAGATTATGTAGT.............................................................................................................. 21 2 3 0.67 2 2
........................................................AGAGGTAGTAGATTGTATAG............................................................................................................... 20 1 3 0.67 2 2
........................................................TGAGGTAGTAGATTGTATACTTAA........................................................................................................... 24 3 3 0.67 2 2
........................................................TGAGGTAGTAGATTGTACAGTTA............................................................................................................ 23 2 3 0.67 2 2
........................................................TGAGGTAGTGGATTGTATACT.............................................................................................................. 21 2 3 0.67 2 2
........................................................TGAGGGAGTAGGTTGTATAGTTG............................................................................................................ 23 2 5 0.60 3 3
........................................................TGAGGTAGTAGAATGTATAGTCA............................................................................................................ 23 3 5 0.60 3 3
........................................................TGAGGTAGTAGATTGTATGGTA............................................................................................................. 22 2 5 0.60 3 3
........................................................TGAGGTGGTAGATTGTATAAT.............................................................................................................. 21 2 7 0.57 4 4
........................................................TGAGGTAGTAGAGTCTATAGTT............................................................................................................. 22 2 2 0.50 1 1
........................................................TGAGATAGTAGATTGTATAGTTA............................................................................................................ 23 2 2 0.50 1 1
........................................................TGAGGTAATAGATTGTATAGT.............................................................................................................. 21 1 2 0.50 1 1
...........................................................GGTAGTAGATTGTATAGT.............................................................................................................. 18 0 2 0.50 1 1
........................................................TGAGGTAGTAGATTATATAG............................................................................................................... 20 1 2 0.50 1 1
........................................................TGAGGTAGTCGATTGTATATTT............................................................................................................. 22 2 2 0.50 1 1
........................................................TGAGGTGGTAGATTGTATAG............................................................................................................... 20 1 2 0.50 1 1
........................................................TGAGGTAGTACATTGTATAGT.............................................................................................................. 21 1 2 0.50 1 1
........................................................TGAGGTAGTAGACTGTATAATT............................................................................................................. 22 2 2 0.50 1 1
........................................................TGAGCTAGTAGATTGTATAGT.............................................................................................................. 21 1 2 0.50 1 1
........................................................TGAGGTGGTAGATTGTATAGTC............................................................................................................. 22 2 2 0.50 1 1
........................................................TGAGGTAGTAGTTTGTGCAGTTGT........................................................................................................... 24 3 2 0.50 1 1
........................................................TGAGGTAGAAGATTGTATAGT.............................................................................................................. 21 1 2 0.50 1 1
........................................................CGAGGTAGTAGATTGTATAGTTA............................................................................................................ 23 2 2 0.50 1 1
........................................................TGAGGTAGTAGATTGTATTGT.............................................................................................................. 21 1 2 0.50 1 1
........................................................TGAGGTAGTGGATTGTATATTT............................................................................................................. 22 2 4 0.50 2 2
........................................................TGAGGTAGTAGAGTGTATAGTTAT........................................................................................................... 24 2 2 0.50 1 1
................................................................................................................CTATACAATCTATTGCCTTCCTG.................................................... 23 2 2 0.50 1 1
........................................................TGAGGTAGTAGATTGCATAGTTA............................................................................................................ 23 2 2 0.50 1 1
........................................................TGAGGTAGTAGATTGTATAATA............................................................................................................. 22 2 2 0.50 1 1
........................................................TGAGGTACTAGATTGTATAGTT............................................................................................................. 22 1 2 0.50 1 1
........................................................TGAGGTCGTCGATTGTATAGTTA............................................................................................................ 23 3 2 0.50 1 1
........................................................TGAGGTAGTAGATTCTCTAGTT............................................................................................................. 22 2 2 0.50 1 1
........................................................TGAGGTAGTAGATTGAATAGTT............................................................................................................. 22 1 2 0.50 1 1
........................................................TGAGGTAGCAGATTGTATAGTTA............................................................................................................ 23 2 2 0.50 1 1
........................................................TGAGGTAGTGGAGTGTATAGTT............................................................................................................. 22 2 2 0.50 1 1
........................................................TGAGGTCGTCGATTGTATAATT............................................................................................................. 22 3 2 0.50 1 1
........................................................TGAGGTAGTAGATTGTATAGTAAT........................................................................................................... 24 2 2 0.50 1 1
........................................................TGAGGTAGTACATTGTATAGTTA............................................................................................................ 23 2 2 0.50 1 1
........................................................TGAGGTAGTCGATTGTATAA............................................................................................................... 20 2 2 0.50 1 1
................................................................................................................CTATACAATGTATTGCCTTCCT..................................................... 22 2 2 0.50 1 1
........................................................TGAGGTAGTAGATTGGATAGT.............................................................................................................. 21 1 2 0.50 1 1
........................................................TGAGGTAGTAGATTGTAAAGT.............................................................................................................. 21 1 2 0.50 1 1
........................................................TAAGGTAGTAGATTGTATAGTTA............................................................................................................ 23 2 2 0.50 1 1
........................................................TGAGGTAGTAGATTGTATAGTTATC.......................................................................................................... 25 2 2 0.50 1 1
........................................................TGAGGTTGTAGATTGTATAG............................................................................................................... 20 1 2 0.50 1 1
........................................................TGAGGTAGTAGATTGTATAGTCC............................................................................................................ 23 2 2 0.50 1 1
........................................................TGAGGTAGTAGATTGTCTAG............................................................................................................... 20 1 2 0.50 1 1
........................................................TGAGGTAGTAGATTGTATCGTT............................................................................................................. 22 1 2 0.50 1 1
........................................................TGACGTAGTAGATTGTATAGT.............................................................................................................. 21 1 2 0.50 1 1
........................................................TGAAGTAGTAGATTGTATAGT.............................................................................................................. 21 1 2 0.50 1 1
........................................................TGAGGTAGTAGATTGTATACTA............................................................................................................. 22 2 2 0.50 1 1
.............................................................TAGTAGATTGTATAGT.............................................................................................................. 16 0 2 0.50 1 1
........................................................TCAGGTAGTAGATTGTATAGT.............................................................................................................. 21 1 2 0.50 1 1
.........................................................GAGGTAGTAGATTGTATAGGT............................................................................................................. 21 1 2 0.50 1 1
........................................................TGAGGTAGTCGATTGTAT................................................................................................................. 18 1 2 0.50 1 1
.......................................................CTGAGGTAGTAGATTGTATAG............................................................................................................... 21 1 2 0.50 1 1
.................................................................................................................TATACAATCTATTGCCTTCCTA.................................................... 22 2 2 0.50 1 1
........................................................TGAGGTAGTAGACTGTATA................................................................................................................ 19 1 2 0.50 1 1
........................................................TGAGGTCGTCGATTGTATAGT.............................................................................................................. 21 2 2 0.50 1 1
........................................................TGAGGTAGTAGGTTGTATAGTTGTT.......................................................................................................... 25 2 2 0.50 1 1
........................................................TGAGGTAGTAGATTTTATAGTTA............................................................................................................ 23 2 2 0.50 1 1
.........................................................GAGGTAGTAGATTGTATA................................................................................................................ 18 0 2 0.50 1 1
........................................................TGAGGTAGTAGATTGTGTA................................................................................................................ 19 1 2 0.50 1 1
.........................................................TAGGTAGTAGATTGTATAGTT............................................................................................................. 21 1 2 0.50 1 1
........................................................TGAGGTAGTAGATTGTATAGTTAAG.......................................................................................................... 25 2 2 0.50 1 1
.........................................................GAGGTAGTAGATTGTATAG............................................................................................................... 19 0 2 0.50 1 1
........................................................TGAGGTCGTAGATTGTATA................................................................................................................ 19 1 2 0.50 1 1
........................................................TGAGGTAGTAGATTGTATCG............................................................................................................... 20 1 2 0.50 1 1
........................................................TGAGGAAGTAGATTGTATAGTTA............................................................................................................ 23 2 4 0.50 2 2
........................................................TGAGGTAGTAGATTGTATAGTTGGA.......................................................................................................... 25 2 2 0.50 1 1
........................................................TGAGGTAGTCGATTGTATACT.............................................................................................................. 21 2 2 0.50 1 1

Anti-sense strand reads

AAGGAAAACTTTATCTACACGAGAGGCAAGGTCTTCTTTTCTAACGAGACAGCCTCACTCCATCATCTAACATATCAACACCCCATCACTAAAATGGGACAAGTCCTCTATTGATATGTTAGATAACGGAAGGGACTCCTCACCTGAACGACGTAAAACAAAAATAGATCTATCATAATTTTGAGTC

***************************************.(((((((.((((...((((((((((((((((((((((((((((((.....))))))).........)))))))))))))))))))))))..)))))))))))....***************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:54 AM