dya_977

intron [Dyak\tRNA:GE26851-in]; exon [Dyak\tRNA:GE26851:2]; exon [Dyak\tRNA:GE26851:1]; tRNA [Dyak\tRNA:GE26851-RA]

-------------#####################################---------------------####################################-------------- ACTCTAAACTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTGGAAAAATGTGCAATAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATTTTTTGTCGATTT ************************************************.....................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V120 male body	M056 embryo	M043 female body	V046 embryo	V058 head	GSM1528802 follicle cells	M026 head	V052 head	SRR1275484 Male prepupae	SRR1275488 Male larvae
.............CCTTCGATAGCTCAGTTGGTAGAGC...................................................................................	25	0	9	1101.11	9910	2978	5452	497	762	98	64	13	46	0	0
......................................................................................GTTCAAATCCGGCTCGAAG................	19	0	10	422.30	4223	3927	53	171	8	33	0	21	9	1	0
.............CCTTCGATAGCTCAGTTGGTAGA.....................................................................................	23	0	9	168.56	1517	1274	73	84	30	39	0	2	15	0	0
......................................................................................GTTCATATCCGGCTCGAAG................	19	1	11	114.09	1255	1172	30	32	4	2	0	13	0	0	2
...............TTCGATAGCTCAGTTGGTAGA.....................................................................................	21	0	9	103.44	931	855	24	6	24	13	0	2	7	0	0
...............TTCGATAGCTCAGTTGGTAGAGC...................................................................................	23	0	9	94.11	847	425	370	24	22	2	0	0	4	0	0
......................................................................................GTTCAGATCCGGCTCGAAG................	19	1	10	90.20	902	838	33	8	1	2	0	19	0	1	0
.............CCTTCGATAGCTCAGTTGGTAGAGCGGTG...............................................................................	29	0	9	78.56	707	645	30	0	29	0	0	3	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCTGTG...............................................................................	29	1	9	65.56	590	578	12	0	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGCAGAGC...................................................................................	25	1	9	63.56	572	341	222	8	1	0	0	0	0	0	0
.............................................................................AGGTCGCTGGTTCAAATCCGG.......................	21	0	10	45.30	453	70	160	169	46	6	0	0	2	0	0
...........................................................................ATAGGTCGCTGGTTCAAATCC.........................	21	0	10	41.30	413	174	132	70	15	4	0	13	5	0	0
.....................................................................................GGTTCAAATCCGGCTCGAAG................	20	0	10	40.90	409	353	25	15	6	9	0	1	0	0	0
......................................................................................GTTCAAATCCGGCTCGAA.................	18	0	10	40.30	403	279	13	60	5	32	0	2	12	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCAGTG...............................................................................	29	1	9	37.89	341	330	11	0	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAG......................................................................................	22	0	9	37.00	333	221	8	34	35	24	0	0	11	0	0
...............TTCGATAGCTCAGTTGGTAG......................................................................................	20	0	9	33.78	304	185	7	11	76	15	0	1	9	0	0
.............................................................................AGGTCGCTGGTTCAAATCC.........................	19	0	10	28.90	289	6	176	103	2	2	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGAGA......................................................................................	22	3	10	28.80	288	288	0	0	0	0	0	0	0	0	0
..........................................................................CATAGGTCGCTGGTTCAAATCC.........................	22	0	10	28.30	283	148	41	47	3	6	0	32	6	0	0
...........................................................................ATAGGTCGCTGGTTCAAATCCGG.......................	23	0	10	28.10	281	94	87	66	29	1	0	1	3	0	0
.................CGATAGCTCAGTTGGTAGA.....................................................................................	19	0	10	28.00	280	234	3	11	17	11	0	1	3	0	0
.............CGTTCGATAGCTCAGTTGGTAGAGC...................................................................................	25	1	9	27.89	251	1	250	0	0	0	0	0	0	0	0
.............................................................................AGGTCGCTGGTTCATATCCGG.......................	21	1	11	26.36	290	30	203	42	13	1	0	1	0	0	0
..............CTTCGATAGCTCAGTTGGTAGAGC...................................................................................	24	0	9	25.56	230	30	138	56	6	0	0	0	0	0	0
.................CGATAGCTCAGTTGGTAGAGC...................................................................................	21	0	9	25.33	228	143	55	7	9	8	0	1	5	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCGGT................................................................................	28	0	9	24.56	221	167	10	7	6	0	31	0	0	0	0
............................................................................TAGGTCGCTGGTTCAAATCC.........................	20	0	10	24.50	245	68	101	43	10	5	0	18	0	0	0
.............CCTTCGATAGCTCAGTTGGCAGA.....................................................................................	23	1	9	23.44	211	210	0	1	0	0	0	0	0	0	0
.............CCCTCGATAGCTCAGTTGGTAGAGC...................................................................................	25	1	9	21.89	197	3	191	0	3	0	0	0	0	0	0
.............................................................................AGGTCGCTGGTTCAGATCCGG.......................	21	1	11	19.00	209	18	161	19	9	1	0	1	0	0	0
..............................................................................GGTCGCTGGTTCAAATCC.........................	18	0	10	18.70	187	0	107	64	15	0	0	1	0	0	0
.............CCTTCGATAGCTCAGTTGG.........................................................................................	19	0	9	18.56	167	24	5	94	18	13	0	0	13	0	0
..............................................................................GGTCGCTGGTTCAAATCCGG.......................	20	0	10	18.50	185	28	33	110	12	1	0	0	1	0	0
..................GATAGCTCAGTTGGTAGAGC...................................................................................	20	0	9	18.00	162	106	37	6	4	7	0	0	2	0	0
.......................................................................ATCCATAGGTCGCTGGTTC...............................	19	0	10	17.30	173	2	112	35	16	4	0	0	4	0	0
.................CGTTAGCTCAGTTGGTAGA.....................................................................................	19	1	10	16.90	169	9	0	151	0	2	0	4	3	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCTGT................................................................................	28	1	9	16.67	150	134	5	11	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGT........................................................................................	20	0	9	16.56	149	84	11	25	3	20	0	0	6	0	0
.............CCTTCGATAGCTCAGTTGGTAGAG....................................................................................	24	0	9	16.00	144	52	27	40	22	3	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCGTG................................................................................	28	2	9	15.44	139	136	3	0	0	0	0	0	0	0	0
...........................................................................ATAGGTCGCTGGTTCATATCC.........................	21	1	10	15.20	152	36	109	5	0	0	0	1	1	0	0
...............TTCGATAGCTCAGTTGGCAGA.....................................................................................	21	1	9	15.11	136	136	0	0	0	0	0	0	0	0	0
...........................................................................ATAGGTCGCTGGTTCATATCCGG.......................	23	1	10	15.10	151	43	83	17	7	1	0	0	0	0	0
............................................................................TAGGTCGCTGGTTCAAATCCGG.......................	22	0	10	14.80	148	43	34	50	17	4	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCAGT................................................................................	28	1	9	14.67	132	119	6	7	0	0	0	0	0	0	0
...................ATAGCTCAGTTGGTAGAGC...................................................................................	19	0	9	14.67	132	7	25	71	5	21	0	0	3	0	0
.............CCTTCGATAACTCAGTTGGTAGAGC...................................................................................	25	1	9	14.33	129	40	79	7	3	0	0	0	0	0	0
.............................................................................AGGTCGCTGGTTCATATCC.........................	19	1	11	14.27	157	1	138	18	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTA.......................................................................................	21	0	9	14.11	127	42	11	52	3	13	0	1	5	0	0
...............TTCGATAGCTCAGTTGGTAGAG....................................................................................	22	0	9	14.00	126	72	15	2	35	2	0	0	0	0	0
.....................................................................................GGTTCATATCCGGCTCGAAG................	20	1	10	13.90	139	105	30	2	0	0	0	1	1	0	0
...............GCCGTTAGCTCAGTTGGTAGA.....................................................................................	21	3	12	13.33	160	0	0	159	1	0	0	0	0	0	0
....................................................................................TGGTTCAAATCCGGCTCGAAG................	21	0	10	13.10	131	103	12	9	0	7	0	0	0	0	0
...................ATAGCTCAGTTGGTAGAG....................................................................................	18	0	10	12.90	129	1	6	105	0	6	0	7	4	0	0
..................................................................TGTAGATCCATAGGTCGCTG...................................	20	3	13	12.69	165	59	22	21	0	1	0	62	0	0	0
.........................CAGTTGGTAGAGCTGTGGA.............................................................................	19	1	10	12.40	124	116	4	2	0	0	2	0	0	0	0
...........................................................................ATAGGTCGCTGGTTCAGATCCGG.......................	23	1	10	12.30	123	38	71	4	10	0	0	0	0	0	0
...........................................................................ATAGGTCGCTGGTTCAGATCC.........................	21	1	10	12.20	122	23	81	6	2	0	0	10	0	0	0
.....................................................................................GGTTCAGATCCGGCTCGAAG................	20	1	10	11.80	118	97	21	0	0	0	0	0	0	0	0
.............................................................................AGGTCGCTGGTTCAGATCC.........................	19	1	11	10.64	117	1	109	7	0	0	0	0	0	0	0
........................TCAGTTGGTAGAGCTGTGGA.............................................................................	20	1	10	10.50	105	92	12	0	1	0	0	0	0	0	0
..................GTTAGCTCAGTTGGTAGA.....................................................................................	18	1	11	9.73	107	0	0	105	0	2	0	0	0	0	0
................TCGATAGCTCAGTTGGTAGAGC...................................................................................	22	0	9	9.56	86	34	42	7	1	1	0	0	1	0	0
.......................................................................ATCCATAGGTCGCTGGTTCAAATCCGG.......................	27	0	10	9.40	94	17	27	48	2	0	0	0	0	0	0
..........................................................................CATAGGTCGCTGGTTCAAATCCGG.......................	24	0	10	8.70	87	10	15	61	0	0	0	0	1	0	0
............................................................................TAGGTCGCTGGTTCAGATCC.........................	20	1	11	7.91	87	16	59	3	1	0	0	8	0	0	0
..........................................................................CATAGGTCGCTGGTTCATATCC.........................	22	1	10	7.90	79	24	48	6	0	0	0	1	0	0	0
.......................................................................ATCCATAGGTCGCTGGTTCA..............................	20	0	10	7.80	78	4	8	56	1	4	0	1	4	0	0
................TCGATAGCTCAGTTGGTAGA.....................................................................................	20	0	10	7.70	77	63	2	2	5	2	0	0	3	0	0
.....................................................................................GGTTCAAATCCGGCTCGAA.................	19	0	10	7.40	74	47	7	15	1	2	0	0	2	0	0
..............................................................................GGTCGCTGGTTCATATCCGG.......................	20	1	11	7.36	81	14	39	25	3	0	0	0	0	0	0
......................................................................................GTTCATATCCGGCTCGAA.................	18	1	11	7.27	80	52	12	12	0	0	0	0	4	0	0
..............................................................................GGTCGCTGGTTCATATCC.........................	18	1	11	7.27	80	0	72	8	0	0	0	0	0	0	0
.............CCTGCGATAGCTCAGTTGGTAGAGC...................................................................................	25	1	9	7.22	65	0	65	0	0	0	0	0	0	0	0
............................................................................TAGGTCGCTGGTTCATATCCGG.......................	22	1	11	7.18	79	19	47	10	3	0	0	0	0	0	0
......................................................................................GTTCAGATCCGGCTCGAA.................	18	1	10	7.10	71	54	6	7	0	3	0	1	0	0	0
..............................................................................GGTCGCAGGTTCGAATCCT........................	19	3	20	7.10	142	0	0	140	0	1	0	0	1	0	0
............................................................................TAGGTCGCTGGTTCATATCC.........................	20	1	11	7.00	77	9	63	2	2	0	0	1	0	0	0
..................................................TTGGAAAAATGTGCAATAGAA..................................................	21	0	1	7.00	7	0	4	0	2	1	0	0	0	0	0
..............................................................................GGTCGCTGGTTCAGATCC.........................	18	1	11	7.00	77	0	71	4	0	0	0	2	0	0	0
..........................................................................CATAGGTCGCTGGTTCAGATCC.........................	22	1	10	6.90	69	34	15	4	0	0	0	16	0	0	0
.............................................................................AGGTCGCTGGTTCAAATCCGGC......................	22	0	10	6.90	69	0	54	15	0	0	0	0	0	0	0
...............GCCGTTAGCTCAGTTGGTAGAG....................................................................................	22	3	11	6.55	72	4	0	65	0	0	0	3	0	0	0
.............CCTCCGATAGCTCAGTTGGTAGAGC...................................................................................	25	1	9	6.44	58	3	55	0	0	0	0	0	0	0	0
...........................................................................ATAGGTCGCTGGTTCAAATC..........................	20	0	10	6.40	64	16	6	32	0	1	0	9	0	0	0
......................................................................................GTTCACATCCGGCTCGAAG................	19	1	10	6.30	63	63	0	0	0	0	0	0	0	0	0
...............TTCGATAGCTCAGTTGGCAGAGC...................................................................................	23	1	9	6.22	56	39	15	2	0	0	0	0	0	0	0
..............................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG................	27	0	10	6.20	62	0	13	48	1	0	0	0	0	0	0
...............................................................................GTCGCTGGTTCAAATCCGG.......................	19	0	10	6.20	62	7	13	38	3	1	0	0	0	0	0
...............GCCGTTAGCTCAGTTGGTAGAGC...................................................................................	23	3	10	6.10	61	15	0	39	0	3	0	0	4	0	0
......................................................................................GTTCAAATCCGGCTCGAAGG...............	20	0	10	6.10	61	44	12	4	0	1	0	0	0	0	0
.......................................................................ATCCATAGGTCGCTGGTTCATATCCGG.......................	27	1	10	6.10	61	9	37	14	0	0	0	1	0	0	0
............................................................................TAGGTCGCTGGTTCAGATCCGG.......................	22	1	11	6.09	67	14	46	3	2	0	0	1	1	0	0
..................GTTAGCTCAGTTGGTAGAG....................................................................................	19	1	11	6.09	67	8	0	53	0	3	0	1	2	0	0
.............CTTTCGATAGCTCAGTTGGTAGAGC...................................................................................	25	1	9	5.89	53	0	52	0	1	0	0	0	0	0	0
........................................................................TCCATAGGTCGCTGGTTCAAATCCGG.......................	26	0	10	5.80	58	14	18	22	1	0	0	1	2	0	0
...............TGCGATAGCTCAGTTGGTAGAGC...................................................................................	23	1	9	5.78	52	0	51	1	0	0	0	0	0	0	0
..............................................................................GGTCGCTGGTTCAGATCCGG.......................	20	1	11	5.73	63	18	32	12	0	1	0	0	0	0	0
.................CGTTAGCTCAGTTGGTAGAG....................................................................................	20	1	10	5.70	57	8	0	49	0	0	0	0	0	0	0
..................GATAGCTCAGTTGGTAGA.....................................................................................	18	0	10	5.50	55	21	0	9	17	7	0	0	1	0	0
..........................................................................CATAGGTCGCTGGTTCATATCCGG.......................	24	1	10	5.40	54	4	39	9	0	1	0	1	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCGGTGGA.............................................................................	31	0	9	5.22	47	0	0	0	0	0	47	0	0	0	0
..................CATAGCTCAGTTGGTAGAG....................................................................................	19	1	10	5.10	51	9	0	35	0	5	0	2	0	0	0
.............................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG................	28	0	10	5.10	51	1	50	0	0	0	0	0	0	0	0
...........................................................TGTGCAATAGAAATCCATAGGTCGCTG...................................	27	0	1	5.00	5	0	0	0	0	0	0	4	1	0	0
....................................................................................TGGTTCAAATCCGGCTCGAA.................	20	0	10	5.00	50	26	2	19	0	3	0	0	0	0	0
..........................................................................CATAGGTCGCTGGTTCAGATCCGG.......................	24	1	10	5.00	50	12	29	9	0	0	0	0	0	0	0
..........................................GACTGTAGTTGGAAAAATGTGC.........................................................	22	0	1	5.00	5	0	4	0	1	0	0	0	0	0	0
....................................................................................TGGTTCAGATCCGGCTCGAAG................	21	1	10	4.90	49	42	7	0	0	0	0	0	0	0	0
.............................................................................ATGTCGCTGGTTCATATCCGG.......................	21	2	11	4.82	53	1	52	0	0	0	0	0	0	0	0
.............................................................................ATGTCGCTGGTTCAAATCCGG.......................	21	1	10	4.80	48	0	48	0	0	0	0	0	0	0	0
.................CGATAGCTCAGTTGGCAGA.....................................................................................	19	1	10	4.80	48	48	0	0	0	0	0	0	0	0	0
.......................................................................ATCCATAGGTCGCTGGTTCAAATCC.........................	25	0	10	4.80	48	3	27	17	0	1	0	0	0	0	0
..............................................................................GGTCGCAGGTTCGAATCC.........................	18	2	10	4.80	48	0	0	47	0	0	0	1	0	0	0
.............TCTTCGATAGCTCAGTTGGTAGAGC...................................................................................	25	1	9	4.78	43	0	42	0	1	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCGTGGA..............................................................................	30	3	9	4.78	43	0	0	0	0	0	43	0	0	0	0
..........................AGTTGGTAGAGCTGTGGA.............................................................................	18	1	10	4.70	47	39	5	2	1	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCTGTGGA.............................................................................	31	1	9	4.67	42	0	0	0	0	0	42	0	0	0	0
.............CCTTCGATAGCTCAGTTGGGAGAGC...................................................................................	25	1	9	4.56	41	18	20	0	2	0	0	0	1	0	0
.............CCTACGATAGCTCAGTTGGTAGAGC...................................................................................	25	1	9	4.56	41	0	41	0	0	0	0	0	0	0	0
.............CCTTCGATATCTCAGTTGGTAGAGC...................................................................................	25	1	9	4.56	41	6	31	3	0	0	0	1	0	0	0
..........................AGTTGGTAGAGCGCTTGACT...........................................................................	20	2	10	4.50	45	1	0	37	0	0	0	7	0	0	0
..............................................................................GGTCGCAGGTTCAAACCCTGCT.....................	22	3	10	4.50	45	0	0	45	0	0	0	0	0	0	0
.......................................................................ATCCATAGGTCGCTGGTTCAGATCCGG.......................	27	1	10	4.50	45	12	30	3	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCAGTGGA.............................................................................	31	1	9	4.44	40	0	0	0	0	0	40	0	0	0	0
....................................................................................TGGTTCATATCCGGCTCGAAG................	21	1	10	4.40	44	30	10	4	0	0	0	0	0	0	0
.................CGTTAGCTCAGTTGGTAGAGC...................................................................................	21	1	9	4.33	39	0	0	35	0	0	0	0	4	0	0
.........................................................................................CAAATCCGGCTCGAAGGATTT...........	21	0	4	4.25	17	0	0	10	2	2	0	2	1	0	0
.............................................................................ATGTCGCTGGTTCAAATCC.........................	19	1	10	4.20	42	0	42	0	0	0	0	0	0	0	0
........................................................................TCCATAGGTCGCTGGTTCA..............................	19	0	10	4.20	42	1	0	37	0	1	0	1	2	0	0
.............................................................................AGGTCGCTGGTTCAAATC..........................	18	0	10	4.20	42	5	18	17	1	0	0	1	0	0	0
..................................................TTGGAAAAATGTGCAATAGA...................................................	20	0	1	4.00	4	0	4	0	0	0	0	0	0	0	0
.............CCTTCTATAGCTCAGTTGGTAGAGC...................................................................................	25	1	9	4.00	36	1	34	0	0	0	1	0	0	0	0
...............GCCGTTAGCTCAGTTGGTAG......................................................................................	20	3	12	4.00	48	0	0	48	0	0	0	0	0	0	0
.......................................................................................TTCAAATCCGGCTCGAAG................	18	0	10	4.00	40	12	4	16	3	4	0	0	1	0	0
...............GCCGTTAGCTCAGTTGGTA.......................................................................................	19	3	20	3.95	79	0	0	78	0	0	0	1	0	0	0
...............CTTGTTAGCTCAGTTGGTAGA.....................................................................................	21	3	13	3.92	51	5	0	45	0	1	0	0	0	0	0
................CCGTTAGCTCAGTTGGTAGA.....................................................................................	20	2	12	3.92	47	5	0	38	0	2	0	0	2	0	0
.............................................................................AGGTCGCTGGTTCAAATCCGGCTC....................	24	0	10	3.90	39	0	29	10	0	0	0	0	0	0	0
...........................GTTGGTAGAGCGCTTGACT...........................................................................	19	2	11	3.82	42	0	0	36	0	0	0	6	0	0	0
...........................................................................ATAGGTCGCTGGTTCAAAT...........................	19	0	10	3.70	37	15	0	21	0	0	0	1	0	0	0
.........................CAGTTGGTAGAGCGCTTGACT...........................................................................	21	2	10	3.60	36	1	0	34	0	0	0	1	0	0	0
.........................CAGTTGGTAGAGCGGTGGA.............................................................................	19	0	10	3.60	36	32	3	1	0	0	0	0	0	0	0
........................TCAGTTGGTAGAGCGGTGGA.............................................................................	20	0	10	3.60	36	34	2	0	0	0	0	0	0	0	0
.............................................................................AGGTCGCGGGTTCGAATCC.........................	19	2	20	3.55	71	7	0	60	0	4	0	0	0	0	0
...........................................................................ATAGGTCGCTGGTTCAAATCCG........................	22	0	10	3.50	35	17	1	9	1	2	3	1	1	0	0
..................GTTAGCTCAGTTGGTAGAGC...................................................................................	20	1	10	3.40	34	1	0	32	0	1	0	0	0	0	0
............................................................................TAGGTCGCTGGTTCAAATC..........................	19	0	10	3.40	34	9	3	16	1	2	0	2	1	0	0
...........................................................................ATAGGTCGCTGGTTCAAATCCGGC......................	24	0	10	3.40	34	2	19	10	2	0	1	0	0	0	0
.............................................................................GGGTCGCAGGTTCGAATCC.........................	19	3	20	3.35	67	0	0	67	0	0	0	0	0	0	0
...........................................................................ATAGGTCGCTGGTTCATCC...........................	19	3	16	3.31	53	17	27	2	2	0	0	5	0	0	0
..................CATAGCTCAGTTGGTAGA.....................................................................................	18	1	10	3.30	33	0	0	28	0	0	0	4	1	0	0
.............CCTTCGATAGCTCAGTTGGAAGAGC...................................................................................	25	1	9	3.22	29	15	14	0	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAAC...................................................................................	25	1	9	3.22	29	6	22	0	1	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTG..........................................................................................	18	0	9	3.22	29	1	1	3	8	6	0	0	10	0	0
............................................................................TAGGTCGCTGGTTCAAATCCGGC......................	23	0	10	3.20	32	1	21	8	0	0	0	2	0	0	0
.............................................................................ATGTCGCTGGTTCATATCC.........................	19	2	11	3.18	35	0	35	0	0	0	0	0	0	0	0
...........................................................................AGAGGTCGCTGGTTCAAATCC.........................	21	1	10	3.00	30	0	30	0	0	0	0	0	0	0	0
.............................................TGTAGTTGGAAAAATGTGCA........................................................	20	0	1	3.00	3	1	0	1	1	0	0	0	0	0	0
...........................................ACTGTAGTTGGAAAAATGTGC.........................................................	21	0	1	3.00	3	0	2	0	1	0	0	0	0	0	0
......................................................................................GTTCAAATCCGGCTCGAAGGA..............	21	0	10	3.00	30	25	2	1	0	2	0	0	0	0	0
........................TCAGTTGGTAGAGCAGTGGA.............................................................................	20	1	10	2.90	29	24	5	0	0	0	0	0	0	0	0
.........................CAGTTGGTAGAGCAGTGGA.............................................................................	19	1	10	2.90	29	28	1	0	0	0	0	0	0	0	0
.............CCTTCGATAGATCAGTTGGTAGAGC...................................................................................	25	1	10	2.90	29	0	26	0	3	0	0	0	0	0	0
..............CCTTGTTAGCTCAGTTGGTAGA.....................................................................................	22	3	10	2.90	29	0	0	29	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCAG.................................................................................	27	1	9	2.89	26	23	2	1	0	0	0	0	0	0	0
..................................................................TGTAGATCCATAGGTCGCTGGTTCA..............................	25	3	8	2.88	23	2	4	9	1	0	7	0	0	0	0
..............................................................................GGTCGATGGTTCAAGTCC.........................	18	2	18	2.83	51	0	0	50	0	0	0	1	0	0	0
..........................AGTTGGTAGAGCGCTTGAC............................................................................	19	2	11	2.82	31	0	0	30	0	0	0	1	0	0	0
.........................CAGTTGGTAGAGCGCTTGAC............................................................................	20	2	10	2.80	28	0	0	25	0	0	0	3	0	0	0
.............................................................................AGGTCGCAGGTTCAAACCCTGCT.....................	23	3	10	2.80	28	0	0	28	0	0	0	0	0	0	0
.............................................................................AGGTCGCTGGTTCAGATCCGGCTCGAAG................	28	1	10	2.80	28	0	28	0	0	0	0	0	0	0	0
..............CGTCGATAGCTCAGTTGGTAGAGC...................................................................................	24	1	9	2.78	25	0	25	0	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGCAGAGCTGT................................................................................	28	2	9	2.78	25	25	0	0	0	0	0	0	0	0	0
...............................................................................GTCGCTGGTTCATATCCGG.......................	19	1	11	2.73	30	2	20	7	0	0	0	0	1	0	0
.......................................................................ATCCATAGGTCGCTGGTTCATATCC.........................	25	1	10	2.70	27	0	21	6	0	0	0	0	0	0	0
.............CCTTCGATACCTCAGTTGGTAGAGC...................................................................................	25	1	9	2.67	24	4	17	2	1	0	0	0	0	0	0
...............TTCGATAGCTCAGTTGGTA.......................................................................................	19	0	9	2.67	24	5	5	7	1	3	0	0	3	0	0
..............................................................................GTTCGCTGGTTCAAATCC.........................	18	1	10	2.60	26	0	26	0	0	0	0	0	0	0	0
..........................AGTTGGTAGAGCGGTGGAC............................................................................	19	0	10	2.60	26	6	7	1	0	0	0	12	0	0	0
.............................................................................AGGTCGCAGGTTCAAACCCT........................	20	3	20	2.60	52	0	0	52	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGGAGA.....................................................................................	23	1	9	2.56	23	22	1	0	0	0	0	0	0	0	0
.............................................................................AGGTCGCTGGTTCATATCCGGCTCGAAG................	28	1	10	2.50	25	0	25	0	0	0	0	0	0	0	0
........................................................................TCCATAGGTCGCTGGTTCATATCCGG.......................	26	1	10	2.50	25	4	18	3	0	0	0	0	0	0	0
..............................................................................GGTCGCTGGTTCATATCCGGCTCGAAG................	27	1	10	2.50	25	0	10	15	0	0	0	0	0	0	0
..........................AGTTGGTAGAGCGGTGGA.............................................................................	18	0	10	2.50	25	21	1	0	0	2	0	1	0	0	0
...................TTAGCTCAGTTGGTAGAG....................................................................................	18	1	11	2.45	27	1	0	22	0	3	0	0	1	0	0
.............CCTTCGATGGCTCAGTTGGTAGAGC...................................................................................	25	1	9	2.44	22	3	2	17	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCCGT................................................................................	28	1	9	2.44	22	22	0	0	0	0	0	0	0	0	0
................TTGTTAGCTCAGTTGGTAGA.....................................................................................	20	2	12	2.42	29	3	0	26	0	0	0	0	0	0	0
..........................................................................CATAGGTCGCTGGTTCAAATC..........................	21	0	10	2.40	24	13	1	8	1	1	0	0	0	0	0
..................GATAGCTCAGTTGGTAGAG....................................................................................	19	0	10	2.40	24	14	7	3	0	0	0	0	0	0	0
..........................................................................CATAGGTCGCTGGTTC...............................	16	0	10	2.30	23	0	0	0	0	0	23	0	0	0	0
.................GCATAGCTCAGTTGGTAGA.....................................................................................	19	2	17	2.29	39	1	0	38	0	0	0	0	0	0	0
..................................................................TGTAGATCCATAGGTCGCTGG..................................	21	3	8	2.25	18	13	2	2	0	1	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGATC...................................................................................	25	1	9	2.22	20	9	8	0	0	3	0	0	0	0	0
...................TTAGCTCAGTTGGTAGAGCAGCGGAC............................................................................	26	3	9	2.22	20	0	0	0	0	0	20	0	0	0	0
...................ATAGCTCAGTTGGTAGAGCAGC................................................................................	22	2	9	2.22	20	1	0	18	0	1	0	0	0	0	0
.................CGATAGCTCAGTTGGTAGAG....................................................................................	20	0	10	2.20	22	11	2	1	7	0	0	0	1	0	0
.......................................................................ATCCATAGGTCGCTGGTTCAGATCC.........................	25	1	10	2.20	22	0	19	3	0	0	0	0	0	0	0
.............................................................................AGGTCGCTGGTTCATATCCGGCTC....................	24	1	10	2.20	22	0	18	4	0	0	0	0	0	0	0
.............................................................................AGGTCGCTGGTTCAAATCCGGCT.....................	23	0	10	2.20	22	2	4	16	0	0	0	0	0	0	0
........................................................................TCCATAGGTCGCTGGTTCAGATCCGG.......................	26	1	10	2.20	22	7	14	1	0	0	0	0	0	0	0
.......................................................................................TTCAAATCCGGCTCGAAGGA..............	20	0	10	2.20	22	9	5	8	0	0	0	0	0	0	0
............................................................................TAGGTCGCTGGTTCAAATCCGGCTCGAAG................	29	0	10	2.20	22	5	17	0	0	0	0	0	0	0	0
.............................................................................AGGTCGTTGGTTCAAATCC.........................	19	1	11	2.18	24	1	0	23	0	0	0	0	0	0	0
..................................................................TGTAGATCCATAGGTCGCTGGTTC...............................	24	3	8	2.13	17	0	14	3	0	0	0	0	0	0	0
..................CATAGCTCAGTTGGTAGAGC...................................................................................	20	1	9	2.11	19	1	0	16	0	1	0	0	1	0	0
.............................................................................AGGTCGCTGGTTCAAATCCG........................	20	0	10	2.10	21	5	5	7	3	0	0	1	0	0	0
.....................................................................................GGTTCATATCCGGCTCGAA.................	19	1	10	2.10	21	11	6	4	0	0	0	0	0	0	0
................TCGATAGCTCAGTTGGTAG......................................................................................	19	0	10	2.10	21	10	0	2	5	2	0	1	1	0	0
...........................................................................AGAGGTCGCTGGTTCATATCC.........................	21	2	10	2.10	21	0	21	0	0	0	0	0	0	0	0
.......................................................................ATCCATAGGTCGCTGGTTCAAATCCGGC......................	28	0	10	2.10	21	2	18	0	1	0	0	0	0	0	0
........................................................................TCCATAGGTCGCTGGTTCAAATCC.........................	24	0	10	2.10	21	1	12	6	2	0	0	0	0	0	0
.............................................................................ATGTCGCTGGTTCAGATCCGG.......................	21	2	11	2.09	23	0	23	0	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCGT.................................................................................	27	1	9	2.00	18	15	2	1	0	0	0	0	0	0	0
.................CGATAGCTCAGTTGGCAGAGC...................................................................................	21	1	9	2.00	18	17	1	0	0	0	0	0	0	0	0
..........................................GACTGTAGTTGGAAAAATGTGCA........................................................	23	0	1	2.00	2	0	1	1	0	0	0	0	0	0	0
..............................................................................GGTCGCTGGTTCAGATCCGGCTCGAAG................	27	1	10	2.00	20	0	10	10	0	0	0	0	0	0	0
..............CTTCGATAGCTCAGTTGGCAGAGC...................................................................................	24	1	9	2.00	18	3	12	3	0	0	0	0	0	0	0
.............................................................................AGGTCGATGGTTCAAGTC..........................	18	2	14	2.00	28	0	0	24	0	0	0	4	0	0	0
...........................................................................ATAGGTCGCTGGTTCAAATCCGGCTC....................	26	0	10	2.00	20	1	12	5	2	0	0	0	0	0	0
................TCGGTAGCTCAGTCGGTAGAGC...................................................................................	22	2	11	2.00	22	1	0	21	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGCAGAGCTGTG...............................................................................	29	2	9	2.00	18	18	0	0	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGCAGAGCAGT................................................................................	28	2	9	2.00	18	18	0	0	0	0	0	0	0	0	0
...........................................................................ATAGGTCGCTGGTTCAGATC..........................	20	1	10	2.00	20	14	2	0	0	1	0	3	0	0	0
...........................................................TGTGCAATAGAAATCCATAGGTCG......................................	24	0	1	2.00	2	1	0	0	0	0	0	1	0	0	0
...................ATAGCTCAGTTGGTAGAGCGGTGGAC............................................................................	26	0	9	2.00	18	0	11	0	2	0	0	5	0	0	0
..............CTTCGATAGCTCAGTTGGTAGA.....................................................................................	22	0	9	2.00	18	11	0	7	0	0	0	0	0	0	0
.................TGTTAGCTCAGTTGGTAGA.....................................................................................	19	2	17	1.94	33	0	0	32	0	1	0	0	0	0	0
..........................................................................CATAGGTCGCTGGTTCATCC...........................	20	3	14	1.93	27	14	10	2	0	0	0	1	0	0	0
.............................................................................ATGTCGCTGGTTCAGATCC.........................	19	2	13	1.92	25	0	25	0	0	0	0	0	0	0	0
...............................................................................GTCGCTGGTTCAGATCCGG.......................	19	1	11	1.91	21	6	9	6	0	0	0	0	0	0	0
............................................................................TAGGTCGCTGGTTCATATCCGGCTCGAAG................	29	1	10	1.90	19	2	17	0	0	0	0	0	0	0	0
..............................................................................GGTCGCTGGTTCAAATCCGGC......................	21	0	10	1.90	19	0	8	11	0	0	0	0	0	0	0
.............................................................................ATGTCGCTGGTTCAAATCCGGC......................	22	1	10	1.90	19	0	19	0	0	0	0	0	0	0	0
.................CGTTAGCTCAGTTGGTAG......................................................................................	18	1	10	1.90	19	0	0	16	0	1	0	0	2	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCTGTGG..............................................................................	30	1	9	1.89	17	17	0	0	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGG...................................................................................	25	1	9	1.89	17	0	15	0	2	0	0	0	0	0	0
.............................................................................AGGTCGCAGGTTCAAACCC.........................	19	2	20	1.85	37	0	0	37	0	0	0	0	0	0	0
..............................................................................GGTCGTTGGTTCAAATCC.........................	18	1	12	1.83	22	0	0	21	0	1	0	0	0	0	0
............................................................................GAGGTCGATGGTTCAAGTCC.........................	20	3	17	1.82	31	1	0	30	0	0	0	0	0	0	0
......................................................................................GTTCATATCCGGCTCGAAGG...............	20	1	11	1.82	20	18	2	0	0	0	0	0	0	0	0
........................................................................TCCATAGGTCGCTGGTTCATATCC.........................	24	1	10	1.80	18	1	17	0	0	0	0	0	0	0	0
.....................................................................................GGTTCAAATCCGGCTCGAAGG...............	21	0	10	1.80	18	11	3	3	0	1	0	0	0	0	0
................................................................................TCGCTGGTTCAAATCCGGCTCGAAGG...............	26	0	10	1.80	18	0	0	1	0	0	17	0	0	0	0
.............................................................................AGGTCGCTGGTTCAAATCCGGCTCGAA.................	27	0	10	1.80	18	1	2	15	0	0	0	0	0	0	0
...............TTCGATAGCTCAGTTGGTAGAGCGGTG...............................................................................	27	0	9	1.78	16	15	0	0	1	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGACC...................................................................................	25	1	9	1.78	16	10	3	0	2	0	1	0	0	0	0
..............................................................................GGTCGTTGGTTCAAATCCA........................	19	2	12	1.75	21	2	0	17	0	1	0	0	1	0	0
................................TAGAGCGGTGGACTGTAGTTGGAAA................................................................	25	0	4	1.75	7	0	0	0	0	0	7	0	0	0	0
..............................................................................GGTCGCAGGTTCAAACCCTG.......................	20	3	17	1.71	29	0	0	29	0	0	0	0	0	0	0
...........................................................................AGAGGTCGCTGGTTCATATCCGG.......................	23	2	10	1.70	17	0	17	0	0	0	0	0	0	0	0
...........................................................................AGAGGTCGCTGGTTCAGATCC.........................	21	2	10	1.70	17	0	17	0	0	0	0	0	0	0	0
..............................................................................GGTCGCTGGTTCAAATCCGGCTC....................	23	0	10	1.70	17	0	1	15	0	1	0	0	0	0	0
.............CCTTTGATAGCTCAGTTGGTAGAGC...................................................................................	25	1	9	1.67	15	2	13	0	0	0	0	0	0	0	0
.............CCTTCGATAACTCAGTTGGTAGA.....................................................................................	23	1	9	1.67	15	14	0	0	0	0	0	0	1	0	0
.............CGTTCGATAGCTCAGTTGGCAGAGC...................................................................................	25	2	9	1.67	15	0	15	0	0	0	0	0	0	0	0
...............TTCGATAGCTCAGTTGGTAGAGCTGTGGA.............................................................................	29	1	9	1.67	15	15	0	0	0	0	0	0	0	0	0
....................................................................................TGGTTCAAATCCGGCTCGA..................	19	0	10	1.60	16	4	0	12	0	0	0	0	0	0	0
.......................................................................ATCCATAGGTCGCTGGTTCATCC...........................	23	3	10	1.60	16	0	15	1	0	0	0	0	0	0	0
.............................................................................AGGTCGATGGTTCAAGTCC.........................	19	2	10	1.60	16	0	0	15	0	1	0	0	0	0	0
..............................GGTAGAGCGGTGGACTGTAGTTGGA..................................................................	25	0	5	1.60	8	0	0	0	0	0	8	0	0	0	0
.........................................................................................CAAATCCGGCTCGAAGGATT............	20	0	5	1.60	8	0	0	2	0	0	0	6	0	0	0
...........................................................................ATAGGTCGCTGGTTCATATCCG........................	22	1	10	1.60	16	9	4	2	0	1	0	0	0	0	0
........................................................................TCCATAGGTCGCTGGTTCAGATCC.........................	24	1	10	1.60	16	0	13	3	0	0	0	0	0	0	0
...................TTAGCTCAGTTGGTAGAGC...................................................................................	19	1	10	1.60	16	1	1	12	0	1	0	0	1	0	0
.............................................................................AGGTCGCAGGTTCAAACCCTG.......................	21	3	16	1.56	25	0	0	25	0	0	0	0	0	0	0
..........................AGTTGGTAGAGCGCTTGA.............................................................................	18	2	18	1.56	28	0	0	28	0	0	0	0	0	0	0
..................GATAGCTCAGTTGGCAGAGC...................................................................................	20	1	9	1.56	14	14	0	0	0	0	0	0	0	0	0
.............................................................................AGGTCGTTGGTTCAAATCCA........................	20	2	11	1.55	17	2	0	15	0	0	0	0	0	0	0
.................CGGTAGCTCAGTTGGTAGA.....................................................................................	19	1	11	1.55	17	2	0	13	0	2	0	0	0	0	0
.................CGATAGCTCAGTTGGTAG......................................................................................	18	0	10	1.50	15	1	0	7	0	4	0	1	2	0	0
......................................................................................GTTCAGATCCGGCTCGAAGG...............	20	1	10	1.50	15	12	2	0	0	0	0	0	1	0	0
................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGAC.............	28	1	10	1.50	15	0	3	0	0	0	12	0	0	0	0
........................................................................TCCATAGGTCGCTGGTTC...............................	18	0	10	1.50	15	0	9	2	2	1	0	0	1	0	0
........................TCAGTTGGTAGAGCAGTG...............................................................................	18	1	10	1.50	15	15	0	0	0	0	0	0	0	0	0
..................................................TGGGAAAAATGTGCAATAGA...................................................	20	1	2	1.50	3	0	3	0	0	0	0	0	0	0	0
......................................................................................GTTCAAATCCGGCTCGCAG................	19	1	10	1.50	15	6	0	0	0	5	0	0	4	0	0
...........................GTTGGTAGAGCTGTGGAC............................................................................	18	1	10	1.50	15	0	12	0	1	0	0	2	0	0	0
.............................................................................AGGTCGCTGGTTCATATCCGGC......................	22	1	11	1.45	16	0	15	0	0	0	0	1	0	0	0
..................CTTAGCTCAGTTGGTAGAG....................................................................................	19	2	11	1.45	16	1	0	15	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGCTGGTAGAGC...................................................................................	25	1	9	1.44	13	4	7	1	1	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCGGTGG..............................................................................	30	0	9	1.44	13	13	0	0	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGTAGAGCGG.................................................................................	27	0	9	1.44	13	3	5	4	1	0	0	0	0	0	0
...............CTCGGTAGCTCAGTTGGTAGA.....................................................................................	21	2	10	1.40	14	9	0	3	0	1	0	1	0	0	0
..............................................................................GGTCGTTGGTTCAAATCCAGCTCC...................	24	3	10	1.40	14	0	0	14	0	0	0	0	0	0	0
.......................................................................................TTCAAATCCGGCTCGAAGG...............	19	0	10	1.40	14	5	0	7	1	0	0	0	1	0	0
..........................AGTTGGTAGAGCTGTGGAC............................................................................	19	1	10	1.40	14	3	5	0	0	0	0	6	0	0	0
.............................................................................AGGTCGCTGGTTCAGATCCGGCTC....................	24	1	10	1.40	14	0	12	2	0	0	0	0	0	0	0
................CCGTTAGCTCAGTTGGTAGAGC...................................................................................	22	2	10	1.40	14	2	0	9	0	2	0	0	1	0	0
...........................................................................ATAGGTCGCTGGTTCATATC..........................	20	1	10	1.40	14	13	1	0	0	0	0	0	0	0	0
................TCGATAGCTCAGTTGGTAGAG....................................................................................	21	0	10	1.40	14	7	2	0	5	0	0	0	0	0	0
........................TCAGTTGGTAGAGCTGTG...............................................................................	18	1	10	1.40	14	14	0	0	0	0	0	0	0	0	0
...............TTCGATAACTCAGTTGGTAGA.....................................................................................	21	1	9	1.33	12	9	0	1	1	0	0	0	1	0	0
...............................................................................GTCGCAGGTTCAAACCCTGCT.....................	21	3	12	1.33	16	0	0	16	0	0	0	0	0	0	0
..................GATAGCTCAGTTGGTAGAGCGGTGGAC............................................................................	27	0	9	1.33	12	3	8	1	0	0	0	0	0	0	0
...............TTCGATAGCTCAGTTGGGAGA.....................................................................................	21	1	9	1.33	12	12	0	0	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGAAGA.....................................................................................	23	1	9	1.33	12	11	1	0	0	0	0	0	0	0	0
.............CCTTCGATAGCTCAGTTGGCAGAGCAGTG...............................................................................	29	2	9	1.33	12	12	0	0	0	0	0	0	0	0	0

TGAGATTTGAGTTGGAAGCTATCGAGTCAACCATCTCGCCACCTGACATCAACCTTTTTACACGTTATCTTTAGGTATCCAGCGACCAAGTTTAGGCCGAGCTTCCTAAAAAACAGCTAAA ************************************************.....................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR1275486 Male prepupae	V058 head	M043 female body	M056 embryo	M026 head	V120 male body
.................................TCTCGCAGCCTGACATC.......................................................................	17	2	19	1.21	23	23	0	0	0	0	0
........GAGTTGGAAGCTATCGAGTC.............................................................................................	20	0	1	1.00	1	0	1	0	0	0	0
...............................CATCTAGCAGCCTGACATC.......................................................................	19	3	19	0.32	6	1	0	2	3	0	0
..............................CCATCTAGCAGCCTGACATC.......................................................................	20	3	11	0.27	3	0	0	3	0	0	0
...........................................................................................TTAGGCCGAGCTTCCTAAGTAG........	22	3	5	0.20	1	0	0	0	0	1	0
.............................ACCATCTAGCAGCCTGACAT........................................................................	20	3	13	0.15	2	0	0	1	1	0	0
................................ATCTAGCAGCCTGACATC.......................................................................	18	3	20	0.15	3	1	0	0	2	0	0
............TGGAAGCTATCGAGTCAACCA........................................................................................	21	0	7	0.14	1	0	0	1	0	0	0
..............GAAGCTATCGAGTCAACCAT.......................................................................................	20	0	9	0.11	1	0	0	0	0	0	1
.................................TCTAGCAACCTGACATC.......................................................................	17	2	18	0.11	2	2	0	0	0	0	0
...............................CGTCTCGCCGCCTGACATC.......................................................................	19	2	10	0.10	1	1	0	0	0	0	0
...............................CATCTCGCAGCCTGACAT........................................................................	18	2	12	0.08	1	0	0	1	0	0	0
..............................CAGTCTCGCCGCCTGACATC.......................................................................	20	3	15	0.07	1	1	0	0	0	0	0
..............................CCATCTAGCAGCCTGACAT........................................................................	19	3	16	0.06	1	0	0	1	0	0	0

Species	Coordinate	ID	Alignment
droYak3	3R:8557284-8557404 -	dya_977	ACTCTA--A-ACTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAAAATGTGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTC-G-ATTT
droEre2	scaffold_4770:17091841-17091959 +	der_662	AAGCTA--A-ACTTAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAA-ACGTGCAA-----TAGATATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGGA---ATTT
droSec2	scaffold_0:17359018-17359139 +	dse_554	AGTATG--A-ACTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAAAACGTGCAA----ATAGATATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTA-A-TTTT
droSim2	3r:16495172-16495292 +		TGTAAG--A-ACTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAAAACGTGCAA-----TAGATATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTA-A-TTTT
dm3	chr3R:4494320-4494440 -		AGTTTG--A-ACTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAAATTATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTA-A-TTTT
droEug1	scf7180000409490:231412-231530 +		CCC-AG--C-ACGCCCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAA-ACATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTT-G-TTTT
droBia1	scf7180000302402:7197910-7198028 -		CCC-AG--C-ACACCCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAA-ACATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTT-T-TTTT
droTak1	scf7180000415417:557741-557861 -		CCAGTA--A-TTTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GTACAAAATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTT-T-CTTT
droEle1	scf7180000491212:1344572-1344692 +		CACGTG--A-TTTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAA-ACATGCGA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTA-TGTT-TCCTTT
droRho1	scf7180000759969:575-695 -		CCCATA--A-ACTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGCTG---GAAA-ATGTACAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTT-TTATTT
droFic1	scf7180000454106:2698680-2698800 +		CACATG--G-TTTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAACATATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTC-A-TTTT
droKik1	scf7180000302690:132436-132550 -		ACTCTT--A----AGACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTGTTGGAAATAATTGCGA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------GTTT---------TTT
droAna3	scaffold_13340:18704191-18704306 -		CCTTCG--T-TTTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAACATATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTTTTG--------T
droBip1	scf7180000395652:466459-466575 +		CCACCG--T-TTTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAA--CTTGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTTTTG-----ATAT
dp5	2:17052473-17052593 +	dps_600	ACT-GG--A-ATTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGATA---GAAACACGTGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAG------TTTT-TTTT-TTGGTG
droPer2	scaffold_0:3335855-3335976 -	dpe_382	ACT-GG--A-ATTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGATA---GAAACACGTGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAG------TTTT-TCTTTTTGTTG
droWil2	scf2_1100000004943:8786080-8786192 +	dwi_3388	A-----------TCACCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GTGTAATATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TTAA-A-ATTT
droVir3	scaffold_12963:9822828-9822952 +	dvi_11162	ACACAA--CACATCGACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAGT---GATA----TACAAAT-TGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCTCAGTTTTT-TG-----GTTT
droMoj3	scaffold_6500:1852733-1852848 +	dmo_1441	CTC-CA--T----ACACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAGA---G----ACATGCAATG-TGTAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------GTT--GGTA-A-AATG
droGri2	scaffold_15252:11985830-11985959 -		ACACTAAGTGTATCGACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTGA---GAAA---TTGCAACGTTGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCTCAATTTTTTTG-----TTTT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droYak3

ACTCTA--A-ACTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAAAATGTGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTC-G-ATTT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
................CCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	25	9	1101.11	9910	13	497	5452	762	46	98	2978	0	0	0	64
.................................................................................................GTTCAAATCCGGCTCGAAG.........................	19	10	422.30	4223	21	171	53	8	9	33	3927	0	0	1	0
................CCTTCGATAGCTCAGTTGGTAGA......................................................................................................	23	9	168.56	1517	2	84	73	30	15	39	1274	0	0	0	0
..................TTCGATAGCTCAGTTGGTAGA......................................................................................................	21	9	103.44	931	2	6	24	24	7	13	855	0	0	0	0
..................TTCGATAGCTCAGTTGGTAGAGC....................................................................................................	23	9	94.11	847	0	24	370	22	4	2	425	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	29	9	78.56	707	3	0	30	29	0	0	645	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGG................................	21	10	45.30	453	0	169	160	46	2	6	70	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCC..................................	21	10	41.30	413	13	70	132	15	5	4	174	0	0	0	0
................................................................................................GGTTCAAATCCGGCTCGAAG.........................	20	10	40.90	409	1	15	25	6	0	9	353	0	0	0	0
.................................................................................................GTTCAAATCCGGCTCGAA..........................	18	10	40.30	403	2	60	13	5	12	32	279	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAG.......................................................................................................	22	9	37.00	333	0	34	8	35	11	24	221	0	0	0	0
..................TTCGATAGCTCAGTTGGTAG.......................................................................................................	20	9	33.78	304	1	11	7	76	9	15	185	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCC..................................	19	10	28.90	289	0	103	176	2	0	2	6	0	0	0	0
................CCTTCGATAGCTCAGTTGGAGA.......................................................................................................	22	10	28.80	288	0	0	0	0	0	0	288	0	0	0	0
.....................................................................................CATAGGTCGCTGGTTCAAATCC..................................	22	10	28.30	283	32	47	41	3	6	6	148	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGG................................	23	10	28.10	281	1	66	87	29	3	1	94	0	0	0	0
....................CGATAGCTCAGTTGGTAGA......................................................................................................	19	10	28.00	280	1	11	3	17	3	11	234	0	0	0	0
.................CTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	24	9	25.56	230	0	56	138	6	0	0	30	0	0	0	0
....................CGATAGCTCAGTTGGTAGAGC....................................................................................................	21	9	25.33	228	1	7	55	9	5	8	143	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	28	9	24.56	221	0	7	10	6	0	0	167	0	0	0	31
.......................................................................................TAGGTCGCTGGTTCAAATCC..................................	20	10	24.50	245	18	43	101	10	0	5	68	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCC..................................	18	10	18.70	187	1	64	107	15	0	0	0	0	0	0	0
................CCTTCGATAGCTCAGTTGG..........................................................................................................	19	9	18.56	167	0	94	5	18	13	13	24	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGG................................	20	10	18.50	185	0	110	33	12	1	1	28	0	0	0	0
.....................GATAGCTCAGTTGGTAGAGC....................................................................................................	20	9	18.00	162	0	6	37	4	2	7	106	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTC........................................	19	10	17.30	173	0	35	112	16	4	4	2	0	0	0	0
................CCTTCGATAGCTCAGTTGGT.........................................................................................................	20	9	16.56	149	0	25	11	3	6	20	84	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	24	9	16.00	144	0	40	27	22	0	3	52	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGTG.................................................................................................	28	9	15.44	139	0	0	3	0	0	0	136	0	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGG................................	22	10	14.80	148	0	50	34	17	0	4	43	0	0	0	0
......................ATAGCTCAGTTGGTAGAGC....................................................................................................	19	9	14.67	132	0	71	25	5	3	21	7	0	0	0	0
................CCTTCGATAGCTCAGTTGGTA........................................................................................................	21	9	14.11	127	1	52	11	3	5	13	42	0	0	0	0
..................TTCGATAGCTCAGTTGGTAGAG.....................................................................................................	22	9	14.00	126	0	2	15	35	0	2	72	0	0	0	0
...............................................................................................TGGTTCAAATCCGGCTCGAAG.........................	21	10	13.10	131	0	9	12	0	0	7	103	0	0	0	0
......................ATAGCTCAGTTGGTAGAG.....................................................................................................	18	10	12.90	129	7	105	6	0	4	6	1	0	0	0	0
...................TCGATAGCTCAGTTGGTAGAGC....................................................................................................	22	9	9.56	86	0	7	42	1	1	1	34	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG................................	27	10	9.40	94	0	48	27	2	0	0	17	0	0	0	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGG................................	24	10	8.70	87	0	61	15	0	1	0	10	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCA.......................................	20	10	7.80	78	1	56	8	1	4	4	4	0	0	0	0
...................TCGATAGCTCAGTTGGTAGA......................................................................................................	20	10	7.70	77	0	2	2	5	3	2	63	0	0	0	0
................................................................................................GGTTCAAATCCGGCTCGAA..........................	19	10	7.40	74	0	15	7	1	2	2	47	0	0	0	0
.....................................................TTG---GAAAAATGTGCAA-----TAGAA...........................................................	21	1	7.00	7	0	0	4	2	0	1	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGC...............................	22	10	6.90	69	0	15	54	0	0	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATC...................................	20	10	6.40	64	9	32	6	0	0	1	16	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG.........................	27	10	6.20	62	0	48	13	1	0	0	0	0	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCGG................................	19	10	6.20	62	0	38	13	3	0	1	7	0	0	0	0
.................................................................................................GTTCAAATCCGGCTCGAAGG........................	20	10	6.10	61	0	4	12	0	0	1	44	0	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCCGG................................	26	10	5.80	58	1	22	18	1	2	0	14	0	0	0	0
.....................GATAGCTCAGTTGGTAGA......................................................................................................	18	10	5.50	55	0	9	0	17	1	7	21	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGTGGA..............................................................................................	31	9	5.22	47	0	0	0	0	0	0	0	0	0	0	47
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG.........................	28	10	5.10	51	0	0	50	0	0	0	1	0	0	0	0
.................................................................TGTGCAA-----TAGAAATCCATAGGTCGCTG............................................	27	1	5.00	5	4	0	0	0	1	0	0	0	0	0	0
...............................................................................................TGGTTCAAATCCGGCTCGAA..........................	20	10	5.00	50	0	19	2	0	0	3	26	0	0	0	0
.............................................GACTGTAGTTG---GAAAAATGTGC.......................................................................	22	1	5.00	5	0	0	4	1	0	0	0	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCC..................................	25	10	4.80	48	0	17	27	0	0	1	3	0	0	0	0
....................................................................................................CAAATCCGGCTCGAAGGAT------TT..............	21	4	4.25	17	2	10	0	2	1	2	0	0	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCA.......................................	19	10	4.20	42	1	37	0	0	2	1	1	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATC...................................	18	10	4.20	42	1	17	18	1	0	0	5	0	0	0	0
.....................................................TTG---GAAAAATGTGCAA-----TAGA............................................................	20	1	4.00	4	0	0	4	0	0	0	0	0	0	0	0
..................................................................................................TTCAAATCCGGCTCGAAG.........................	18	10	4.00	40	0	16	4	3	1	4	12	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTC.............................	24	10	3.90	39	0	10	29	0	0	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAAT....................................	19	10	3.70	37	1	21	0	0	0	0	15	0	0	0	0
............................CAGTTGGTAGAGCGGTGGA..............................................................................................	19	10	3.60	36	0	1	3	0	0	0	32	0	0	0	0
...........................TCAGTTGGTAGAGCGGTGGA..............................................................................................	20	10	3.60	36	0	0	2	0	0	0	34	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCG.................................	22	10	3.50	35	1	9	1	1	1	2	17	0	0	0	3
.......................................................................................TAGGTCGCTGGTTCAAATC...................................	19	10	3.40	34	2	16	3	1	1	2	9	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGC...............................	24	10	3.40	34	0	10	19	2	0	0	2	0	0	0	1
......................................................................................ATAGGTCGCTGGTTCATCC....................................	19	16	3.31	53	5	2	27	2	0	0	17	0	0	0	0
................CCTTCGATAGCTCAGTTG...........................................................................................................	18	9	3.22	29	0	3	1	8	10	6	1	0	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGGC...............................	23	10	3.20	32	2	8	21	0	0	0	1	0	0	0	0
................................................TGTAGTTG---GAAAAATGTGCA......................................................................	20	1	3.00	3	0	1	0	1	0	0	1	0	0	0	0
..............................................ACTGTAGTTG---GAAAAATGTGC.......................................................................	21	1	3.00	3	0	0	2	1	0	0	0	0	0	0	0
.................................................................................................GTTCAAATCCGGCTCGAAGGA.......................	21	10	3.00	30	0	1	2	0	0	2	25	0	0	0	0
..................TTCGATAGCTCAGTTGGTA........................................................................................................	19	9	2.67	24	0	7	5	1	3	3	5	0	0	0	0
.............................AGTTGGTAGAGCGGTGGAC.............................................................................................	19	10	2.60	26	12	1	7	0	0	0	6	0	0	0	0
.............................AGTTGGTAGAGCGGTGGA..............................................................................................	18	10	2.50	25	1	0	1	0	0	2	21	0	0	0	0
.....................................................................................CATAGGTCGCTGGTTCAAATC...................................	21	10	2.40	24	0	8	1	1	0	1	13	0	0	0	0
.....................GATAGCTCAGTTGGTAGAG.....................................................................................................	19	10	2.40	24	0	3	7	0	0	0	14	0	0	0	0
.....................................................................................CATAGGTCGCTGGTTC........................................	16	10	2.30	23	0	0	0	0	0	0	0	0	0	0	23
....................CGATAGCTCAGTTGGTAGAG.....................................................................................................	20	10	2.20	22	0	1	2	7	1	0	11	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCT..............................	23	10	2.20	22	0	16	4	0	0	0	2	0	0	0	0
..................................................................................................TTCAAATCCGGCTCGAAGGA.......................	20	10	2.20	22	0	8	5	0	0	0	9	0	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGGCTCGAAG.........................	29	10	2.20	22	0	0	17	0	0	0	5	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCG.................................	20	10	2.10	21	1	7	5	3	0	0	5	0	0	0	0
...................TCGATAGCTCAGTTGGTAG.......................................................................................................	19	10	2.10	21	1	2	0	5	1	2	10	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGGC...............................	28	10	2.10	21	0	0	18	1	0	0	2	0	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCC..................................	24	10	2.10	21	0	6	12	2	0	0	1	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGT..................................................................................................	27	9	2.00	18	0	1	2	0	0	0	15	0	0	0	0
.............................................GACTGTAGTTG---GAAAAATGTGCA......................................................................	23	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCTC.............................	26	10	2.00	20	0	5	12	2	0	0	1	0	0	0	0
.................................................................TGTGCAA-----TAGAAATCCATAGGTCG...............................................	24	1	2.00	2	1	0	0	0	0	0	1	0	0	0	0
......................ATAGCTCAGTTGGTAGAGCGGTGGAC.............................................................................................	26	9	2.00	18	5	0	11	2	0	0	0	0	0	0	0
.................CTTCGATAGCTCAGTTGGTAGA......................................................................................................	22	9	2.00	18	0	7	0	0	0	0	11	0	0	0	0
.....................................................................................CATAGGTCGCTGGTTCATCC....................................	20	14	1.93	27	1	2	10	0	0	0	14	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGC...............................	21	10	1.90	19	0	11	8	0	0	0	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGG....................................................................................................	25	9	1.89	17	0	0	15	2	0	0	0	0	0	0	0
................................................................................................GGTTCAAATCCGGCTCGAAGG........................	21	10	1.80	18	0	3	3	0	0	1	11	0	0	0	0
...........................................................................................TCGCTGGTTCAAATCCGGCTCGAAGG........................	26	10	1.80	18	0	1	0	0	0	0	0	0	0	0	17
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAA..........................	27	10	1.80	18	0	15	2	0	0	0	1	0	0	0	0
..................TTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	27	9	1.78	16	0	0	0	1	0	0	15	0	0	0	0
...................................TAGAGCGGTGGACTGTAGTTG---GAAA..............................................................................	25	4	1.75	7	0	0	0	0	0	0	0	0	0	0	7
.........................................................................................GGTCGCTGGTTCAAATCCGGCTC.............................	23	10	1.70	17	0	15	1	0	0	1	0	0	0	0	0
...............................................................................................TGGTTCAAATCCGGCTCGA...........................	19	10	1.60	16	0	12	0	0	0	0	4	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCATCC....................................	23	10	1.60	16	0	1	15	0	0	0	0	0	0	0	0
.................................GGTAGAGCGGTGGACTGTAGTTG---GA................................................................................	25	5	1.60	8	0	0	0	0	0	0	0	0	0	0	8
....................................................................................................CAAATCCGGCTCGAAGGAT------T...............	20	5	1.60	8	6	2	0	0	0	0	0	0	0	0	0
....................CGATAGCTCAGTTGGTAG.......................................................................................................	18	10	1.50	15	1	7	0	0	2	4	1	0	0	0	0
...........................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGAC------................	28	10	1.50	15	0	0	3	0	0	0	0	0	0	0	12
...................................................................................TCCATAGGTCGCTGGTTC........................................	18	10	1.50	15	0	2	9	2	1	1	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGTGG...............................................................................................	30	9	1.44	13	0	0	0	0	0	0	13	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGG..................................................................................................	27	9	1.44	13	0	4	5	1	0	0	3	0	0	0	0
..................................................................................................TTCAAATCCGGCTCGAAGG........................	19	10	1.40	14	0	7	0	1	1	0	5	0	0	0	0
...................TCGATAGCTCAGTTGGTAGAG.....................................................................................................	21	10	1.40	14	0	0	2	5	0	0	7	0	0	0	0
.....................GATAGCTCAGTTGGTAGAGCGGTGGAC.............................................................................................	27	9	1.33	12	0	1	8	0	0	0	3	0	0	0	0

droEre2

AAGCTA--A-ACTTAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAA-ACGTGCAA-----TAGATATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGGA---ATTT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
................CCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	25	9	831.22	7481	1198	1209	214	775	1264	2711	110
.................................................................................................GTTCAAATCCGGCTCGAAG.........................	19	8	206.75	1654	474	36	10	56	794	284	0
..................TTCGATAGCTCAGTTGGTAG.......................................................................................................	20	9	201.56	1814	31	21	8	1496	96	162	0
......................................................................................ATAGGTCGCTGGTTCAAATCC..................................	21	8	187.38	1499	500	268	16	102	134	479	0
................CCTTCGATAGCTCAGTTGGTAGA......................................................................................................	23	9	186.33	1677	247	182	53	425	167	603	0
........................................................................................AGGTCGCTGGTTCAAATCCGG................................	21	8	151.63	1213	228	455	1	446	18	65	0
.................................................................................................GTTCAAATCCGGCTCGAA..........................	18	8	134.13	1073	171	13	2	25	588	274	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGG................................	23	8	121.00	968	369	164	3	183	46	203	0
................CCTTCGATAGCTCAGTTGGTAG.......................................................................................................	22	9	119.67	1077	101	31	27	641	55	222	0
........................................................................................AGGTCGCTGGTTCAAATCC..................................	19	8	118.13	945	533	339	2	46	9	16	0
..................TTCGATAGCTCAGTTGGTAGA......................................................................................................	21	9	102.33	921	32	42	7	366	212	262	0
.....................................................................................CATAGGTCGCTGGTTCAAATCC..................................	22	8	98.50	788	282	101	12	31	42	320	0
.............................................GACTGTAGTTG---GAAA-ACGTGC.......................................................................	21	1	81.00	81	2	17	2	30	11	19	0
.........................................................................................GGTCGCTGGTTCAAATCC..................................	18	8	77.50	620	314	197	1	74	3	31	0
..................TTCGATAGCTCAGTTGGTAGAGC....................................................................................................	23	9	64.33	579	52	270	4	107	108	38	0
................CCTTCGATAGCTCAGTTGG..........................................................................................................	19	9	62.11	559	185	8	4	86	124	129	23
..................TTCGATAGCTCAGTTGGTAGAG.....................................................................................................	22	9	62.11	559	5	24	2	389	74	65	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGG................................	24	8	57.38	459	381	45	1	11	3	18	0
....................CGATAGCTCAGTTGGTAGA......................................................................................................	19	9	52.00	468	22	10	8	158	33	237	0
.......................................................................................TAGGTCGCTGGTTCAAATCC..................................	20	8	51.50	412	156	105	2	35	42	72	0
.........................................................................................GGTCGCTGGTTCAAATCCGG................................	20	8	48.38	387	86	95	0	173	9	24	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	29	9	42.22	380	7	56	2	144	117	54	0
.....................GATAGCTCAGTTGGTAGA......................................................................................................	18	9	39.56	356	17	6	4	133	22	174	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG................................	27	8	39.00	312	106	145	0	28	18	15	0
......................................................................................ATAGGTCGCTGGTTCAAAT....................................	19	9	33.78	304	71	0	6	0	12	215	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGG................................	22	8	33.63	269	87	71	0	67	12	32	0
......................ATAGCTCAGTTGGTAGAG.....................................................................................................	18	9	31.67	285	17	6	0	0	83	179	0
................CCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	24	9	29.56	266	50	36	6	93	30	51	0
.............................................GACTGTAGTTG---GAAA-ACGTGCA......................................................................	22	1	29.00	29	2	0	0	9	10	8	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	28	9	29.00	261	97	7	1	13	45	89	9
...................TCGATAGCTCAGTTGGTAGA......................................................................................................	20	9	28.00	252	18	1	4	10	20	199	0
................CCTTCGATAGCTCAGTTGGTA........................................................................................................	21	9	27.67	249	50	15	22	53	20	89	0
................CCTTCGATAGCTCAGTTGGAGA.......................................................................................................	22	10	26.80	268	34	0	0	0	40	194	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG.........................	28	8	26.63	213	187	20	0	0	3	3	0
......................................................................................ATAGGTCGCTGGTTCAAATC...................................	20	9	26.00	234	51	8	2	4	23	146	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCC..................................	25	8	25.13	201	66	133	0	0	1	1	0
......................ATAGCTCAGTTGGTAGAGCGGTGGA..............................................................................................	25	9	25.00	225	14	6	4	21	82	65	33
......................................................................................ATAGGTCGCTGGTTCATCC....................................	19	11	24.91	274	51	77	1	0	13	132	0
.................CTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	24	9	23.11	208	139	33	0	4	6	26	0
......................ATAGCTCAGTTGGTAGAGC....................................................................................................	19	9	22.89	206	8	32	3	19	80	64	0
......................................................................................ATAGGTCGCTGGTTCAAATCCG.................................	22	8	22.88	183	85	4	1	3	26	64	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCCGG................................	26	8	21.88	175	55	96	0	18	1	5	0
..........................................................................................GTCGCTGGTTCAAATCCGG................................	19	8	21.75	174	23	113	0	17	11	10	0
................CCTTCGATAGCTCAGTTGGT.........................................................................................................	20	9	21.56	194	28	21	6	66	14	59	0
...............................................................................................TGGTTCAAATCCGGCTCGAAG.........................	21	8	20.88	167	37	28	3	24	44	31	0
................................................................................................GGTTCAAATCCGGCTCGAAG.........................	20	8	20.50	164	47	27	2	23	29	36	0
..................................................................................ATCCATAGGTCGCTGGTTCA.......................................	20	8	20.38	163	94	15	2	30	13	9	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG.........................	27	8	19.75	158	145	12	0	0	0	1	0
.....................................................TTG---GAAA-ACGTGCAA-----TAGAT...........................................................	20	1	19.00	19	8	1	0	1	4	5	0
.....................GATAGCTCAGTTGGTAGAGC....................................................................................................	20	9	15.67	141	2	23	3	32	32	49	0
....................CGATAGCTCAGTTGGTAGAGC....................................................................................................	21	9	15.33	138	5	32	7	36	17	41	0
............................................GGACTGTAGTTG---GAAA-ACGTGC.......................................................................	22	1	15.00	15	1	2	0	3	4	5	0
................CCTTCGATAGCTCAGTTGGTAGAGCGTG.................................................................................................	28	9	13.33	120	0	7	0	0	70	43	0
........................................................................................AGGTCGCTGGTTCAAATCCGGC...............................	22	8	12.63	101	29	65	0	3	2	2	0
.................................................................................................GTTCAAATCCGGCTCGAAGG........................	20	8	11.88	95	45	8	0	2	38	2	0
................CCTTCGATAGCTCAGTTG...........................................................................................................	18	9	11.67	105	27	0	2	3	10	63	0
................................................................................................GGTTCAAATCCGGCTCGAA..........................	19	8	11.13	89	35	12	1	5	22	14	0
..................................................................................................TTCAAATCCGGCTCGAAG.........................	18	8	11.13	89	47	3	0	6	14	19	0
..................................................................................ATCCATAGGTCGCTGGTTC........................................	19	8	10.75	86	28	27	2	14	3	12	0
.....................................................................................CATAGGTCGCTGGTTCATCC....................................	20	10	10.50	105	33	14	0	1	4	53	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGC...............................	24	8	10.13	81	33	33	0	5	5	5	0
................................................TGTAGTTG---GAAA-ACGTGCA......................................................................	19	1	10.00	10	0	0	1	3	3	3	0
...................TCGATAGCTCAGTTGGTAG.......................................................................................................	19	9	9.89	89	9	0	3	16	3	58	0
................CCTTCGATAGCTCAGTTGGTAGG......................................................................................................	23	9	9.78	88	2	0	2	1	8	75	0
...............................................................................................TGGTTCAAATCCGGCTCGAA..........................	20	8	9.13	73	28	9	0	2	17	17	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCC..................................	24	8	9.13	73	11	60	0	1	1	0	0
...............................................CTGTAGTTG---GAAA-ACGTGC.......................................................................	19	1	9.00	9	0	4	0	1	3	1	0
........................................................................................AGGTCGCTGGTTCAAATCCG.................................	20	8	8.75	70	26	8	0	13	10	13	0
.......................................................................................TAGGTCGCTGGTTCAAATC...................................	19	9	8.56	77	21	2	0	3	15	36	0
....................CGATAGCTCAGTTGGTAGAG.....................................................................................................	20	9	8.00	72	0	4	1	58	2	7	0
..................................................................................................TTCAAATCCGGCTCGAAGG........................	19	8	7.75	62	51	2	0	3	5	1	0
........................................................................................AGGTCGCTGGTTCAAATC...................................	18	9	7.44	67	13	23	0	22	3	6	0
....................CGATAGCTCAGTTGGTAG.......................................................................................................	18	9	7.33	66	6	2	0	11	0	47	0
................CCTTCGATAGCTCAGTTGGTAGAGCGT..................................................................................................	27	9	7.22	65	52	1	0	0	1	11	0
..................................................................................ATCCATAGGTCGCTGGTTCATCC....................................	23	8	7.00	56	8	46	0	1	0	1	0
......................................................................................ATAGGTCGCTGGTTCATC.....................................	18	9	6.78	61	6	0	0	0	6	49	0
....................................................................................................CAAATCCGGCTCGAAGGAT------T...............	20	4	6.75	27	17	0	3	0	3	4	0
..................TTCGATAGCTCAGTTGGTA........................................................................................................	19	9	6.56	59	5	6	0	23	11	14	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTC.............................	24	8	6.13	49	18	28	0	2	0	1	0
..............................................ACTGTAGTTG---GAAA-ACGTGC.......................................................................	20	1	6.00	6	0	2	0	1	0	3	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCT..............................	23	8	5.63	45	30	6	0	3	0	6	0
.........................................................................................GGTCGCTGGTTCAAATCCG.................................	19	8	5.63	45	28	2	0	12	2	1	0
................CCTTCGATAGCTCAGTTGGTAGAGCGG..................................................................................................	27	9	5.44	49	41	1	0	1	5	1	0
....................CGATAGCTCAGTTGGTAGG......................................................................................................	19	9	5.44	49	0	1	1	0	0	47	0
.........................................................................................GGTCGCTGGTTCAAATCCGGC...............................	21	8	5.38	43	11	29	0	3	0	0	0
..................TTCGATAGCTCAGTTGGT.........................................................................................................	18	9	5.00	45	3	5	0	23	0	14	0
............................................GGACTGTAGTTG---GAAA-ACGTGCA......................................................................	23	1	5.00	5	0	0	0	1	2	2	0
.................................................................................TATCCATAGGTCGCTGGT..........................................	18	1	5.00	5	2	0	0	0	2	1	0
......................................................................................ATAGGTCGCTGGTTCAAA.....................................	18	9	4.89	44	9	0	0	2	10	23	0
.......................................................................................TAGGTCGCTGGTTCAAATCCG.................................	21	8	4.88	39	22	1	0	0	6	10	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCT..............................	25	8	4.63	37	27	5	1	1	0	3	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGGC...............................	25	8	4.63	37	27	9	0	0	1	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAA..........................	27	8	4.50	36	34	1	0	0	0	1	0
....................................................................................................CAAATCCGGCTCGAAGGAT------TT..............	21	4	4.50	18	15	0	0	0	0	1	2
...................................................................................TCCATAGGTCGCTGGTTCA.......................................	19	8	4.50	36	22	3	1	4	4	2	0
.................CTTCGATAGCTCAGTTGGTAGA......................................................................................................	22	9	4.44	40	20	1	0	5	3	11	0
.....................GATAGCTCAGTTGGTAGAG.....................................................................................................	19	9	4.44	40	1	4	1	8	12	14	0
..........................................................................................GTCGCTGGTTCAAATCCGGC...............................	20	8	4.38	35	7	27	0	1	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCG.................................	26	8	4.38	35	20	2	0	2	5	6	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCTC.............................	26	8	4.25	34	11	21	0	1	0	1	0
.....................................................................................CATAGGTCGCTGGTTCAAATC...................................	21	9	4.22	38	5	2	0	1	3	27	0
.............................................GACTGTAGTTG---GAAA-ACGT.........................................................................	19	1	4.00	4	0	0	1	0	1	2	0
....................................AGAGCGGTGGACTGTAGTTG---GA................................................................................	22	3	4.00	12	0	0	0	0	0	0	12
.........................................................................................GGTCGCTGGTTCAAATCCGGCT..............................	22	8	4.00	32	25	1	0	3	0	3	0
................CCTTCGATAGCTCAGTTGGAG........................................................................................................	21	9	3.89	35	33	0	0	0	0	2	0
...................TCGATAGCTCAGTTGGTAGAGC....................................................................................................	22	9	3.89	35	8	9	1	2	7	8	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGTGG...............................................................................................	30	9	3.78	34	0	0	0	0	0	0	34
.....................................................................................CATAGGTCGCTGGTTCAAATCCG.................................	23	8	3.63	29	14	0	0	0	1	14	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCTCGAA..........................	29	8	3.63	29	5	17	0	0	5	2	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGGC...............................	23	8	3.63	29	12	12	0	3	0	2	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGGC...............................	28	8	3.63	29	3	26	0	0	0	0	0
................................TGGTAGAGCGGTGGACTGTAGTTG---G.................................................................................	25	4	3.50	14	0	0	0	0	0	0	14
.........................................................................................GGTCGCTGGTTCAAATCCGGCTC.............................	23	8	3.38	27	14	5	0	2	0	0	6
.....................................................................................CATAGGTCGCTGGTTCAAAT....................................	20	9	3.33	30	8	0	2	0	1	19	0
...............................TTGGTAGAGCGGTGGACTGTAGTTG---GA................................................................................	27	3	3.00	9	0	0	0	0	0	0	9
.....................................................TTG---GAAA-ACGTGCAA-----TAGA............................................................	19	1	3.00	3	1	1	0	1	0	0	0
........................AGCTCAGTTGGTAGAGCGGTGGACTGTAG........................................................................................	29	9	3.00	27	0	0	0	0	0	0	27
..................TTCGATAGCTCAGTTGGTAT.......................................................................................................	20	9	3.00	27	0	0	0	27	0	0	0
...................TCGATAGCTCAGTTGGTAGG......................................................................................................	20	9	3.00	27	0	0	2	0	0	25	0
...................................................................................TCCATAGGTCGCTGGTTCATCC....................................	22	8	2.88	23	3	20	0	0	0	0	0
.............................AGTTGGTAGAGCGGTGGA..............................................................................................	18	9	2.78	25	2	3	0	2	9	9	0
...................TCGATAGCTCAGTTGGTAGAG.....................................................................................................	21	9	2.78	25	1	0	1	14	5	4	0
..................TTCGATAGCTCAGTTGGTAGG......................................................................................................	21	9	2.78	25	1	0	0	1	1	22	0
......................ATAGCTCAGTTGGTAGAGCGGTGGAC.............................................................................................	26	9	2.78	25	0	1	0	0	0	4	20
..............AACCTTCGATAGCTCAGTTGGTAGAGT....................................................................................................	27	3	2.67	8	0	0	0	0	0	0	8

droSec2

AGTATG--A-ACTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAAAACGTGCAA----ATAGATATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTA-A-TTTT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
................CCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	25	10	863.40	8634	606	3920	2904	1204
.................................................................................................GTTCAAATCCGGCTCGAAG.........................	19	9	192.33	1731	400	923	248	160
................CCTTCGATAGCTCAGTTGGTAGA......................................................................................................	23	10	111.40	1114	35	162	256	661
................CCTTCGATAGCTCAGTTGGTAGG......................................................................................................	23	10	106.20	1062	0	6	3	1053
................CCTTCGATAGCTCAGTTG...........................................................................................................	18	10	83.10	831	6	1	691	133
...................TCGATAGCTCAGTTGGTAGA......................................................................................................	20	10	77.30	773	8	64	24	677
.................................................................................................GTTCAAATCCGGCTCGAA..........................	18	9	68.33	615	116	37	286	176
........................................................................................AGGTCGCTGGTTCAAATCCGG................................	21	9	65.22	587	400	43	116	28
......................................................................................ATAGGTCGCTGGTTCAAATCC..................................	21	9	51.33	462	107	80	76	199
..................TTCGATAGCTCAGTTGGTAGA......................................................................................................	21	10	48.80	488	6	63	256	163
................CCTTCGATAGCTCAGTTGGTAG.......................................................................................................	22	10	47.90	479	49	56	173	201
................CCTTCGATAGCTCAGTTGG..........................................................................................................	19	10	43.90	439	36	10	312	81
..................TTCGATAGCTCAGTTGGTAG.......................................................................................................	20	10	41.70	417	11	45	306	55
...................TCGATAGCTCAGTTGGTAGG......................................................................................................	20	10	41.60	416	1	1	0	414
......................................................................................ATAGGTCGCTGGTTCAAATCCGG................................	23	9	37.89	341	168	45	84	44
......................................................................................ATAGGTCGCTGGTTCAAATCCG.................................	22	9	34.11	307	43	26	16	222
..................TTCGATAGCTCAGTTGGTAGAGC....................................................................................................	23	10	33.60	336	47	105	168	16
......................ATAGCTCAGTTGGTAGAG.....................................................................................................	18	10	28.00	280	26	1	141	112
................CCTTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	28	10	25.20	252	28	17	197	10
....................CGATAGCTCAGTTGGTAGA......................................................................................................	19	10	24.60	246	5	38	117	86
..................TTCGATAGCTCAGTTGGTAGAG.....................................................................................................	22	10	23.20	232	3	13	170	46
........................................................................................AGGTCGCTGGTTCAAATCC..................................	19	9	22.78	205	190	2	13	0
......................ATAGCTCAGTTGGTAGAGC....................................................................................................	19	10	22.30	223	9	5	175	34
...................TCGATAGCTCAGTTGGTAG.......................................................................................................	19	10	21.70	217	7	2	13	195
................CCTTCGATAGCTCAGTTGGAGA.......................................................................................................	22	11	21.18	233	10	28	53	142
................CCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	24	10	20.40	204	13	31	124	36
................................................................................................GGTTCAAATCCGGCTCGAAG.........................	20	9	18.78	169	35	41	45	48
.....................GATAGCTCAGTTGGTAGA......................................................................................................	18	10	18.60	186	3	1	93	89
.......................................................................................TAGGTCGCTGGTTCAAATCC..................................	20	9	18.00	162	49	45	32	36
................CCTTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	29	10	16.90	169	0	102	66	1
......................................................................................ATAGGTCGCTGGTTCAAAT....................................	19	9	16.33	147	21	30	6	90
.................................................................................................GTTCAAATCCGGCTCGAAGG........................	20	9	16.11	145	46	58	20	21
......................................................................................ATAGGTCGCTGGTTCAAATC...................................	20	9	15.67	141	11	17	17	96
....................CGATAGCTCAGTTGGTAGAGC....................................................................................................	21	10	15.20	152	2	28	118	4
................CCTTCGATAGCTCAGTTGGTA........................................................................................................	21	10	14.90	149	9	12	35	93
..................................................................................................TTCAAATCCGGCTCGAAG.........................	18	9	14.89	134	37	3	73	21
.................CTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	24	10	14.60	146	64	32	45	5
.........................................................................................GGTCGCTGGTTCAAATCCGG................................	20	9	14.11	127	64	10	45	8
..................TTCGATAGCTCAGTTGGTAGG......................................................................................................	21	10	13.50	135	0	1	0	134
.....................GATAGCTCAGTTGGTAGAG.....................................................................................................	19	10	13.10	131	0	8	109	14
....................CGATAGCTCAGTTGGTAG.......................................................................................................	18	10	13.00	130	0	0	98	32
.......................................................................................TAGGTCGCTGGTTCAAATCCGG................................	22	9	12.89	116	69	10	27	10
.....................................................................................CATAGGTCGCTGGTTCAAATCC..................................	22	9	11.33	102	17	19	24	42
................CCTTCGATAGCTCAGTTGGTAGAGCGTG.................................................................................................	28	10	10.70	107	0	39	66	2
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG................................	27	9	10.67	96	70	7	14	5
...................TCGATAGCTCAGTTGGTAGAGC....................................................................................................	22	10	10.50	105	3	21	21	60
..................................................................................ATCCATAGGTCGCTGGTTCA.......................................	20	10	9.80	98	43	4	49	2
...................TCGATAGCTCAGTTGGTAGAG.....................................................................................................	21	10	9.70	97	0	5	13	79
...........................................................................................TCGCTGGTTCAAATCCGGCTCGAAG.........................	25	9	9.44	85	4	0	81	0
....................CGATAGCTCAGTTGGTAGG......................................................................................................	19	10	9.30	93	0	0	1	92
.......................................................................................TAGGTCGCTGGTTCAAATC...................................	19	9	9.00	81	9	16	9	47
.....................GATAGCTCAGTTGGTAGAGC....................................................................................................	20	10	9.00	90	1	21	53	15
................................................................................................GGTTCAAATCCGGCTCGAA..........................	19	9	8.33	75	15	2	19	39
................CCTTCGATAGCTCAGTTGGT.........................................................................................................	20	10	8.30	83	4	3	54	22
....................CGATAGCTCAGTTGGTAGAG.....................................................................................................	20	10	8.10	81	0	7	66	8
...........................................................................................TCGCTGGTTCAAATCCGGCTCGAAGG........................	26	9	7.44	67	0	1	65	1
..................................................................................ATCCATAGGTCGCTGGTTC........................................	19	10	7.40	74	20	0	47	7
.....................GATAGCTCAGTTGGTAGG......................................................................................................	18	10	7.10	71	0	0	0	71
..........................................................................................GTCGCTGGTTCAAATCCGG................................	19	9	6.89	62	25	5	25	7
................................................................................................GGTTCAAATCCGGCTCGAAGGA.......................	22	9	6.44	58	10	9	5	34
.........................................................................................GGTCGCTGGTTCAAATCC..................................	18	9	6.44	58	39	0	15	4
...............................................................................................TGGTTCAAATCCGGCTCGAAG.........................	21	9	6.22	56	7	14	27	8
........................................................................................AGGTCGCTGGTTCAAATCCG.................................	20	9	6.22	56	15	6	12	23
...........................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGAC------................	28	10	6.20	62	0	1	61	0
.....................................................TTG---GAAAAACGTGCAA----ATAGAT...........................................................	22	1	6.00	6	5	1	0	0
................CCTTCGATAGCTCAGTTGGTG........................................................................................................	21	10	5.30	53	0	0	0	53
................................................................................................GGTTCAAATCCGGCTCGAAGG........................	21	9	5.22	47	3	2	5	37
...................................................................................TCCATAGGTCGCTGGTTCAAATCCGG................................	26	9	5.22	47	39	2	5	1
.............................................GACTGTAGTTG---GAAAAACGTGC.......................................................................	22	1	5.00	5	0	1	4	0
................CCTTCGATAGCTCAGTTGGTAGAGCGT..................................................................................................	27	10	4.80	48	19	4	23	2
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG.........................	27	9	4.67	42	38	1	3	0
....................................................................................................CAAATCCGGCTCGAAGGAT------T...............	20	5	4.60	23	9	2	8	4
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG.........................	28	9	4.33	39	29	7	2	1
........................................................................................AGGTCGCTGGTTCAAATC...................................	18	9	4.22	38	12	1	17	8
.....................................................................................CATAGGTCGCTGGTTCAAATCCGG................................	24	9	4.00	36	27	4	4	1
.................................................................................................GTTCAAATCCGGCTCGAAGGA.......................	21	9	3.78	34	11	7	5	11
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAA..........................	27	9	3.67	33	32	0	1	0
................CCTTCGATAGCTCAGTTGGG.........................................................................................................	20	10	3.60	36	10	0	26	0
................CCTTCGATAGCTCAGTTGGTAGAGCGG..................................................................................................	27	10	3.60	36	20	2	14	0
...............................................................................................TGGTTCAAATCCGGCTCGAA..........................	20	9	3.56	32	9	2	11	10
................................................TGTAGTTG---GAAAAACGTGC.......................................................................	19	1	3.00	3	1	0	2	0
...................................................................................TCCATAGGTCGCTGGTTCA.......................................	19	10	2.90	29	11	0	18	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTC.............................	24	9	2.67	24	21	2	0	1
...................TCGATAGCTCAGTTGGTA........................................................................................................	18	10	2.60	26	2	0	1	23
..................................................................................ATCCATAGGTCGCTGGTTCAAATCC..................................	25	9	2.56	23	17	1	3	2
......................................................................................ATAGGTCGCTGGTTCAAA.....................................	18	9	2.56	23	3	4	5	11
...........................TCAGTTGGTAGAGCGGTGGA..............................................................................................	20	10	2.50	25	6	13	5	1
............................CAGTTGGTAGAGCGGTGGA..............................................................................................	19	10	2.50	25	4	9	10	2
..............AACCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	26	4	2.50	10	0	0	8	2
................................................................................................GGTTCAAATCCGGCTCGAAGGG.......................	22	9	2.44	22	0	0	0	22
................CCTTCGATAGCTCAGTTGGAG........................................................................................................	21	10	2.40	24	22	1	0	1
................................................................................................GGTTCAAATCCGGCTCGAAGGAC------................	23	10	2.40	24	3	1	1	19
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCG............................	25	9	2.33	21	20	0	1	0
.................................................................................................GTTCAAATCCGGCTCGAG..........................	18	9	2.33	21	1	1	1	18
..............AACCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	27	4	2.25	9	0	1	5	3
.......................................................................................TAGGTCGCTGGTTCAAATCCG.................................	21	9	2.22	20	3	5	3	9
.........................................................................................GGTCGCTGGTTCAAATCCG.................................	19	9	2.22	20	6	1	5	8
.................CTTCGATAGCTCAGTTGGTAGA......................................................................................................	22	10	2.20	22	9	0	6	7
..................................................................................................TTCAAATCCGGCTCGAAGGA.......................	20	9	2.11	19	4	1	3	11
................CCTTCGATAGCTCAGTTGGC.........................................................................................................	20	10	2.10	21	1	0	19	1
........................................................................................AGGTCGCTGGTTCAAATCCGGCT..............................	23	9	2.00	18	13	1	0	4
.....................................................TTG---GAAAAACGTGCAA----ATAGA............................................................	21	1	2.00	2	0	0	0	2
.......................................................................................TAGGTCGCTGGTTCAAAT....................................	18	9	2.00	18	3	1	4	10
............................................GGACTGTAGTTG---GAAAAACGTGC.......................................................................	23	1	2.00	2	0	0	2	0
......................................................TG---GAAAAACGTGCAA----ATAGAT...........................................................	21	1	2.00	2	2	0	0	0
.............................AGTTGGTAGAGCGGTGGA..............................................................................................	18	10	2.00	20	3	4	9	4
..................................................................................................TTCAAATCCGGCTCGAAGG........................	19	9	2.00	18	5	3	6	4
................CCTTCGATAGCTCAGTTGGCC........................................................................................................	21	10	1.90	19	0	0	19	0
.....................GATAGCTCAGTTGGTAGAGCGGTGG...............................................................................................	25	10	1.90	19	1	2	13	3
......................................................................................ATAGGTCGCTGGTTCAAATCCGGC...............................	24	9	1.89	17	10	3	3	1
.....................................................................................CATAGGTCGCTGGTTCAAAT....................................	20	9	1.89	17	0	4	1	12
.....................................................................................CATAGGTCGCTGGTTCAAATCCG.................................	23	9	1.89	17	1	2	3	11
.......................................................................................TAGGTCGCTGGTTCAAATCCGGCT..............................	24	9	1.89	17	11	1	0	5
...........................TCAGTTGGTAGAGCGGTG................................................................................................	18	10	1.70	17	8	0	4	5
................CCTTCGATAGCTCAGTTGGTC........................................................................................................	21	10	1.70	17	2	0	15	0
.................................................................................................GTTCAAATCCGGCTCGAAGGG.......................	21	9	1.67	15	0	0	0	15
............................................................................................CGCTGGTTCAAATCCGGCTCGAAG.........................	24	9	1.67	15	0	0	13	2
..................TTCGATAGCTCAGTTGGT.........................................................................................................	18	10	1.60	16	0	0	12	4
...............................................................................GATATCCATAGGTCGCTGG...........................................	19	2	1.50	3	0	0	3	0
......................ATAGCTCAGTTGGTAGAGCGGTGG...............................................................................................	24	10	1.50	15	1	1	13	0

droSim2

TGTAAG--A-ACTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAAAACGTGCAA-----TAGATATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTA-A-TTTT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
................CCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	25	10	226.80	2268	18	65	51	237	621	720	63	42	23	16	208	201	1	2	0	0	0
................CCTTCGATAGCTCAGTTG...........................................................................................................	18	10	114.70	1147	44	2	4	11	171	432	1	2	1	1	469	8	0	0	0	0	1
.....................................................TTG---GAAAAACGTGCAA-----TAGAT...........................................................	21	1	110.00	110	0	0	0	1	2	1	7	31	5	36	26	1	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG.........................	28	10	99.00	990	0	0	0	970	10	10	0	0	0	0	0	0	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGA......................................................................................................	23	10	55.60	556	18	5	13	92	117	189	32	39	14	7	16	14	0	0	0	0	0
.....................................................TTG---GAAAAACGTGCAA-----TAGA............................................................	20	1	51.00	51	0	0	0	0	0	0	5	41	2	3	0	0	0	0	0	0	0
.................................................................................................GTTCAAATCCGGCTCGAAG.........................	19	10	50.90	509	6	62	36	296	70	10	0	0	0	0	2	27	0	0	0	0	0
...........................................TGGACTGTAGTTG---GAAAAACGTGCAA-----................................................................	26	1	48.00	48	0	0	0	0	0	0	2	0	0	1	45	0	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGG................................	21	10	46.30	463	0	0	1	407	0	0	3	1	0	0	0	51	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	24	10	42.10	421	0	1	0	26	90	243	7	0	3	1	40	8	1	1	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	29	10	35.70	357	0	17	18	301	0	0	0	2	0	0	0	19	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATC...................................	20	10	33.60	336	42	19	9	6	210	40	1	2	0	0	3	2	0	2	0	0	0
....................................................................................................CAAATCCGGCTCGAAGGAT------T...............	20	6	26.33	158	130	10	6	10	0	0	0	1	0	0	1	0	0	0	0	0	0
...........................................TGGACTGTAGTTG---GAAAAACGTGCAA-----T...............................................................	27	1	26.00	26	0	0	0	0	0	0	4	1	0	5	16	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCC..................................	21	10	25.60	256	46	29	24	84	40	0	0	3	0	0	13	17	0	0	0	0	0
................CCTTCGATAGCTCAGTTGG..........................................................................................................	19	10	25.60	256	2	2	0	12	27	45	7	14	10	45	68	23	1	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG.........................	27	10	24.20	242	0	0	0	242	0	0	0	0	0	0	0	0	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	28	10	24.10	241	2	4	4	191	18	9	0	1	0	0	3	8	0	1	0	0	0
...................................................................................................TCAAATCCGGCTCGAAGGA.......................	19	10	23.20	232	2	0	0	0	90	140	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................GTTCAAATCCGGCTCGAA..........................	18	10	22.00	220	1	8	2	89	50	20	11	4	2	0	9	20	0	0	0	0	4
................CCTTCGATAGCTCAGTTGGTAG.......................................................................................................	22	10	18.20	182	5	0	6	49	36	54	1	0	1	0	6	19	0	4	0	0	1
....................................................................................................CAAATCCGGCTCGAAGGA.......................	18	10	17.40	174	3	0	0	0	130	40	0	0	0	0	1	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCG.................................	22	10	15.60	156	28	15	2	11	40	30	1	5	0	0	17	6	0	1	0	0	0
.....................................................................................CATAGGTCGCTGGTTCAA......................................	18	10	15.10	151	0	0	0	1	130	20	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCC..................................	19	10	15.10	151	0	0	2	139	0	10	0	0	0	0	0	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGG................................	23	10	14.60	146	1	1	0	90	10	0	3	1	0	0	3	37	0	0	0	0	0
......................ATAGCTCAGTTGGTAGAGC....................................................................................................	19	10	13.90	139	0	2	1	5	27	9	0	0	0	0	94	1	0	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGG................................	20	10	13.80	138	0	0	0	116	0	0	0	0	0	0	0	22	0	0	0	0	0
.......................TAGCTCAGTTGGTAGA......................................................................................................	16	10	13.30	133	0	0	0	0	0	0	3	54	21	48	7	0	0	0	0	0	0
.....................................................................................CATAGGTCGCTGGTTCAAATCC..................................	22	10	13.10	131	16	30	25	39	0	10	0	0	0	0	0	10	0	1	0	0	0
................CCTTCGATAGCTCAGTTGGTA........................................................................................................	21	10	12.90	129	3	0	3	9	54	18	1	6	3	1	22	5	0	4	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGGCTCGAAG.........................	29	10	12.80	128	0	1	0	126	0	0	0	0	0	0	0	1	0	0	0	0	0
..................TTCGATAGCTCAGTTGGTAG.......................................................................................................	20	10	11.70	117	5	0	21	33	9	0	0	0	0	0	0	49	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGT..................................................................................................	27	10	11.70	117	0	0	0	115	0	0	1	0	0	0	1	0	0	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCA.......................................	20	12	11.67	140	5	3	7	34	66	22	0	2	0	0	0	1	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGT.........................................................................................................	20	10	11.50	115	0	0	1	8	45	36	1	0	0	0	12	11	0	0	0	0	1
.........................GCTCAGTTGGTAGAGC....................................................................................................	16	10	11.40	114	0	0	0	0	0	0	0	0	0	0	114	0	0	0	0	0	0
.................................................................................................GTTCAAATCCGGCTCGAAGGA.......................	21	10	11.40	114	0	0	0	3	90	20	0	1	0	0	0	0	0	0	0	0	0
......................ATAGCTCAGTTGGTAGAG.....................................................................................................	18	10	10.70	107	17	66	12	5	0	0	0	0	0	0	6	1	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCG...................................................................................................	26	10	10.30	103	0	0	0	3	36	54	5	4	0	0	1	0	0	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTC........................................	19	12	10.25	123	12	11	29	8	33	22	1	0	0	0	2	5	0	0	0	0	0
.........................GCTCAGTTGGTAGAGCA...................................................................................................	17	20	10.20	204	0	0	0	0	0	0	0	0	0	2	202	0	0	0	0	0	0
..................TTCGATAGCTCAGTTGGTAGAGC....................................................................................................	23	10	10.00	100	0	0	3	54	18	9	0	0	0	0	2	14	0	0	0	0	0
...................TCGATAGCTCAGTTGGTAGAGC....................................................................................................	22	10	10.00	100	2	0	0	6	36	45	0	0	0	0	11	0	0	0	0	0	0
..................TTCGATAGCTCAGTTGGTAGA......................................................................................................	21	10	9.90	99	5	3	22	28	9	9	2	4	3	1	2	11	0	0	0	0	0
........................AGCTCAGTTGGTAGA......................................................................................................	15	10	9.40	94	0	0	0	0	0	0	9	17	29	36	3	0	0	0	0	0	0
..................................................................................................TTCAAATCCGGCTCGAAG.........................	18	10	9.00	90	3	2	10	54	10	0	0	0	0	0	7	4	0	0	0	0	0
...................TCGATAGCTCAGTTGGTAGA......................................................................................................	20	10	8.70	87	2	2	3	6	0	27	3	14	0	0	30	0	0	0	0	0	0
......................ATAGCTCAGTTGGTAGA......................................................................................................	17	10	8.40	84	0	0	0	0	0	0	7	35	11	9	22	0	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGTG.................................................................................................	28	10	8.20	82	0	0	2	80	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCTCGAA..........................	29	10	8.10	81	0	0	0	78	0	0	2	1	0	0	0	0	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAA..........................	27	10	8.10	81	0	0	0	71	0	10	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCA.......................................	19	12	8.08	97	3	0	2	4	44	44	0	0	0	0	0	0	0	0	0	0	0
................................................TGTAGTTG---GAAAAACGTGCA......................................................................	20	1	8.00	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG................................	27	10	7.80	78	0	2	0	71	0	0	2	0	0	0	0	3	0	0	0	0	0
................................................................................................GGTTCAAATCCGGCTCGAA..........................	19	10	7.70	77	0	0	0	13	30	30	0	0	0	0	4	0	0	0	0	0	0
........................AGCTCAGTTGGTAGAGCA...................................................................................................	18	20	7.55	151	0	0	0	0	0	0	0	0	0	1	150	0	0	0	0	0	0
...............................................................................................TGGTTCAAATCCGGCTCGAAGGA.......................	23	10	7.30	73	0	0	0	0	0	0	47	22	2	2	0	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAA.....................................	18	10	7.00	70	0	0	0	4	60	0	0	4	0	0	2	0	0	0	0	0	0
...........................................TGGACTGTAGTTG---GAAAAACGTGCAA-----TA..............................................................	28	1	7.00	7	0	0	0	0	0	0	2	2	1	2	0	0	0	0	0	0	0
.................................................................................................GTTCAAATCCGGCTCGAAGGAC------................	22	12	6.92	83	46	15	20	0	0	0	0	0	0	0	1	0	0	0	1	0	0
.............................AGTTGGTAGAGCGGTGGAC.............................................................................................	19	10	6.90	69	27	3	9	0	0	0	0	0	0	0	24	1	2	3	0	0	0
..................................................................................................TTCAAATCCGGCTCGAAGGA.......................	20	10	6.90	69	1	0	0	3	60	0	1	0	0	0	3	1	0	0	0	0	0
..................TTCGATAGCTCAGTTGGTAGAG.....................................................................................................	22	10	6.60	66	3	0	6	8	9	9	0	0	0	0	2	29	0	0	0	0	0
................................................................................................GGTTCAAATCCGGCTCGAAGGA.......................	22	10	6.40	64	2	2	0	1	20	0	31	8	0	0	0	0	0	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAA..........................	26	10	6.20	62	0	0	0	52	0	10	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCCGG................................	26	10	6.10	61	0	0	0	51	0	0	0	3	0	5	0	2	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATC...................................	18	10	6.00	60	2	2	1	16	30	0	0	1	0	0	0	8	0	0	0	0	0
...........................................TGGACTGTAGTTG---GAAAAACGTGCA......................................................................	25	1	6.00	6	0	0	0	0	0	0	1	2	0	0	3	0	0	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCC..................................	18	10	5.90	59	0	1	4	51	0	0	0	0	0	0	0	3	0	0	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCGG................................	19	10	5.90	59	1	0	0	56	0	0	0	0	0	0	0	2	0	0	0	0	0
....................CGATAGCTCAGTTGGTAGA......................................................................................................	19	10	5.80	58	2	0	5	7	9	18	0	2	0	0	1	14	0	0	0	0	0
........................AGCTCAGTTGGTAGAGC....................................................................................................	17	10	5.70	57	0	0	0	0	0	0	0	0	0	0	57	0	0	0	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGG................................	22	10	5.70	57	0	0	0	47	0	0	0	0	0	0	0	10	0	0	0	0	0
........................AGCTCAGTTGGTAGAGCG...................................................................................................	18	10	5.50	55	0	0	0	0	50	0	0	0	0	0	5	0	0	0	0	0	0
.......................TAGCTCAGTTGGTAGAGC....................................................................................................	18	10	5.20	52	1	1	0	4	10	0	0	0	2	0	33	1	0	0	0	0	0
.....................................................TTG---GAAAAACGTGCAA-----TA..............................................................	18	1	5.00	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAAT....................................	19	10	5.00	50	4	2	0	3	0	0	2	6	0	0	30	0	0	3	0	0	0
................................................................................................GGTTCAAATCCGGCTCGAAG.........................	20	10	5.00	50	2	2	0	29	10	0	1	1	0	0	1	4	0	0	0	0	0
......................................................................AA-----TAGATATCCATAGGTCGCTG............................................	22	1	5.00	5	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCC..................................	25	10	4.90	49	0	0	1	46	0	0	0	0	0	0	0	2	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAGG........................	29	10	4.90	49	0	0	0	49	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GATAGCTCAGTTGGTAGA......................................................................................................	18	10	4.90	49	0	0	9	9	0	0	5	9	0	1	3	13	0	0	0	0	0
...................................................................................TCCATAGGTCGCTGGTTC........................................	18	12	4.75	57	3	2	2	3	22	22	0	0	1	0	2	0	0	0	0	0	0
....................CGATAGCTCAGTTGGTAGAGC....................................................................................................	21	10	4.60	46	0	2	3	7	18	9	0	0	0	0	4	3	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGG..................................................................................................	27	10	4.60	46	0	0	1	27	0	0	4	10	0	1	2	0	1	0	0	0	0
..................................................................................ATCCATAGGTCGCTGG...........................................	16	12	4.42	53	0	0	0	0	0	0	23	11	6	4	9	0	0	0	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCC..................................	20	10	4.40	44	6	6	11	18	0	0	0	0	0	0	0	3	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCG............................	25	10	4.30	43	0	0	0	23	20	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................CAAATCCGGCTCGAAGGAT------................	19	9	4.11	37	32	1	1	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..............AACCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	26	4	4.00	16	0	0	0	1	0	0	0	0	0	0	15	0	0	0	0	0	0
............................................................................................CGCTGGTTCAAATCCGGCTCGAAGGA.......................	26	10	4.00	40	0	0	0	0	20	20	0	0	0	0	0	0	0	0	0	0	0
................................................................................ATATCCATAGGTCGCTGG...........................................	18	1	4.00	4	0	0	0	1	0	0	0	0	0	0	3	0	0	0	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATC...................................	19	10	4.00	40	12	0	5	1	20	0	0	0	0	0	1	1	0	0	0	0	0
.......................................................................A-----TAGATATCCATAGGTCGCTG............................................	21	1	4.00	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................CCTTCGATAGCTCAG..............................................................................................................	15	11	3.82	42	0	0	0	0	0	0	0	2	0	8	32	0	0	0	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCGGCTCGAAG.........................	26	10	3.80	38	0	0	0	38	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................AGTTGGTAGAGCGGTGGACTG...........................................................................................	21	10	3.70	37	0	0	0	0	0	0	0	2	0	0	1	0	0	34	0	0	0
...............................................................................................TGGTTCAAATCCGGCTCGAAG.........................	21	10	3.60	36	0	0	0	17	10	0	0	0	3	0	1	5	0	0	0	0	0
.....................GATAGCTCAGTTGGTAGAGC....................................................................................................	20	10	3.60	36	0	0	0	3	18	0	0	0	0	0	9	6	0	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATC...................................	24	10	3.40	34	1	0	0	2	10	20	0	0	0	1	0	0	0	0	0	0	0
....................................................................................................CAAATCCGGCTCGAAGGAT------TT..............	21	5	3.40	17	9	0	2	1	0	0	0	0	0	0	2	0	3	0	0	0	0
......................ATAGCTCAGTTGGTAGAGCA...................................................................................................	20	15	3.27	49	0	0	0	0	0	0	0	0	0	0	49	0	0	0	0	0	0
..............................GTTGGTAGAGCGGTGGAC.............................................................................................	18	10	3.20	32	8	0	8	0	0	0	0	0	0	0	13	1	1	1	0	0	0
...........................................................................................TCGCTGGTTCAAATCCGGCTCGAAG.........................	25	10	3.10	31	0	0	0	8	10	10	0	0	0	0	2	1	0	0	0	0	0
...........................................TGGACTGTAGTTG---GAAAAACGTGC.......................................................................	24	1	3.00	3	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0
......................................................TG---GAAAAACGTGCAA-----TAGA............................................................	19	1	3.00	3	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0
...............................................................................................TGGTTCAAATCCGGCTCGAA..........................	20	10	3.00	30	0	0	0	3	20	0	0	0	0	0	4	3	0	0	0	0	0
..............AACCTTCGATAGCTCAGT.............................................................................................................	18	4	3.00	12	0	0	0	0	8	0	0	0	0	0	4	0	0	0	0	0	0
..........................................GTGGACTGTAGTTG---GAAAAACG..........................................................................	22	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................TTG---GAAAAACGTGCAA-----TAGATA..........................................................	22	1	3.00	3	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0
..............................................................................AGATATCCATAGGTCGCTG............................................	19	1	3.00	3	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................GGACTGTAGTTG---GAAAAACGTGCAA-----................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..............................................................................................CTGGTTCAAATCCGGCTCGAAGGA.......................	24	10	3.00	30	0	0	0	1	0	0	18	11	0	0	0	0	0	0	0	0	0
...........................................TGGACTGTAGTTG---GAAAAACGTG........................................................................	23	1	3.00	3	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGG................................	24	10	2.90	29	0	0	0	28	0	0	0	0	0	0	0	1	0	0	0	0	0
..................................................................................................TTCAAATCCGGCTCGAAGGAC------................	21	12	2.83	34	19	1	7	0	0	0	0	1	0	2	3	0	0	1	0	0	0
..............AACCTTCGATAGCTCAGTTGGTAGA......................................................................................................	25	4	2.75	11	0	0	0	0	0	0	1	1	4	1	4	0	0	0	0	0	0
................................................................................................GGTTCAAATCCGGCTCGAAGGAC------................	23	12	2.75	33	13	8	4	0	0	0	7	0	0	0	0	0	1	0	0	0	0
.................................................................................................GTTCAAATCCGGCTCGAAGG........................	20	10	2.70	27	0	0	0	23	0	0	0	0	0	0	2	1	0	1	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCG.................................	20	10	2.60	26	0	2	5	6	10	0	0	0	0	0	0	3	0	0	0	0	0
...................TCGATAGCTCAGTTGGTAG.......................................................................................................	19	10	2.50	25	0	0	1	1	9	9	0	0	0	0	1	4	0	0	0	0	0
......................ATAGCTCAGTTGGTAGAGCGGTGGAC.............................................................................................	26	10	2.50	25	1	2	10	0	0	0	0	0	0	1	5	6	0	0	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCC..................................	24	10	2.50	25	0	0	0	22	0	0	1	1	1	0	0	0	0	0	0	0	0
.................CTTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	28	10	2.40	24	0	0	0	23	0	0	0	0	0	0	0	1	0	0	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGGCTCGAA..........................	28	10	2.40	24	0	0	0	24	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................TCAAATCCGGCTCGAAGG........................	18	10	2.30	23	0	0	0	0	10	10	0	0	0	0	2	1	0	0	0	0	0
..............AACCTTCGATAGCTCAGTTG...........................................................................................................	20	4	2.25	9	1	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGC...............................	22	10	2.20	22	0	0	0	19	0	0	1	2	0	0	0	0	0	0	0	0	0
.......................TAGCTCAGTTGGTAGAGCA...................................................................................................	19	20	2.15	43	0	0	0	0	0	0	0	0	0	1	42	0	0	0	0	0	0
...........................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGA.......................	27	10	2.10	21	0	0	0	1	0	20	0	0	0	0	0	0	0	0	0	0	0
..............................GTTGGTAGAGCGGTGGA..............................................................................................	17	10	2.10	21	0	0	0	0	0	0	1	1	0	0	19	0	0	0	0	0	0
...................TCGATAGCTCAGTTGGTAGAG.....................................................................................................	21	10	2.10	21	0	0	0	1	9	0	0	0	0	0	9	2	0	0	0	0	0
.................CTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	24	10	2.10	21	0	0	1	14	0	0	2	0	0	0	4	0	0	0	0	0	0
.............................................GACTGTAGTTG---GAAAAACGTGCAA-----T...............................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
................................................................................ATATCCATAGGTCGCTGGT..........................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.............................................GACTGTAGTTG---GAAAAACGTGC.......................................................................	22	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.................................................................................TATCCATAGGTCGCTGGTTCAA......................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
...........................................................................................TCGCTGGTTCAAATCCGGCTCGAAGG........................	26	10	2.00	20	0	0	0	2	0	10	0	1	0	0	7	0	0	0	0	0	0
......................................................................................................AATCCGGCTCGAAGGA.......................	16	20	2.00	40	0	0	0	0	0	0	0	0	2	0	38	0	0	0	0	0	0
......................ATAGCTCAGTTGGTAGAGCG...................................................................................................	20	10	2.00	20	0	0	0	0	9	9	0	0	0	0	2	0	0	0	0	0	0
................................................TGTAGTTG---GAAAAACGTGCAA-----................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
.................................................................................TATCCATAGGTCGCTGGTTCAAATC...................................	25	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
.................................................................................TATCCATAGGTCGCTGG...........................................	17	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.............................................GACTGTAGTTG---GAAAAACGTGCAA-----................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...........................................TGGACTGTAGTTG---GAAAAACGTGCAA-----TAGA............................................................	30	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
......................ATAGCTCAGTTGGTA........................................................................................................	15	10	2.00	20	0	0	0	0	0	0	1	8	2	9	0	0	0	0	0	0	0
...............................TTGGTAGAGCGGTGGAC.............................................................................................	17	10	2.00	20	0	0	0	0	0	0	0	1	0	0	19	0	0	0	0	0	0
.....................GATAGCTCAGTTGGTAGAG.....................................................................................................	19	10	1.90	19	1	0	14	0	0	0	0	0	0	0	4	0	0	0	0	0	0
...................TCGATAGCTCAGTTGGTA........................................................................................................	18	10	1.90	19	6	0	2	1	0	0	0	4	0	0	5	1	0	0	0	0	0
.........................GCTCAGTTGGTAGAGCG...................................................................................................	17	10	1.90	19	0	0	0	0	0	0	0	0	0	0	19	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCA.......................................	16	12	1.83	22	0	0	0	0	0	0	4	11	2	0	5	0	0	0	0	0	0
.....................GATAGCTCAGTTGGTAGAGCGGTGGAC.............................................................................................	27	10	1.80	18	0	0	12	0	0	0	0	0	0	0	2	4	0	0	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCGGCT..............................	21	10	1.80	18	0	0	0	2	0	0	0	0	0	0	16	0	0	0	0	0	0
.........................GCTCAGTTGGTAGAGCC...................................................................................................	17	10	1.80	18	0	0	0	0	0	0	0	0	0	0	18	0	0	0	0	0	0
.............................AGTTGGTAGAGCGGTGGA..............................................................................................	18	10	1.80	18	1	0	0	1	0	0	0	0	0	0	12	0	0	4	0	0	0
...............................................................................................TGGTTCAAATCCGGCTCGAAGG........................	22	10	1.80	18	0	0	0	1	0	0	3	10	1	0	1	1	1	0	0	0	0
...............................TTGGTAGAGCGGTGGA..............................................................................................	16	10	1.70	17	0	0	0	0	0	0	0	0	0	0	17	0	0	0	0	0	0
....................................................................................................CAAATCCGGCTCGAAGGAC------................	19	20	1.70	34	27	1	4	0	0	0	0	0	0	0	0	2	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCT..............................	23	10	1.70	17	0	0	0	16	0	0	0	0	0	0	0	1	0	0	0	0	0
.....................................................TTG---GAAAAACGTGCA......................................................................	15	3	1.67	5	0	0	0	0	0	0	1	1	0	0	3	0	0	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGT..........................................	17	12	1.67	20	0	0	0	0	0	0	2	3	0	0	15	0	0	0	0	0	0
........................AGCTCAGTTGGTAGAGCGGTGGAC.............................................................................................	24	10	1.60	16	2	1	5	0	0	0	0	0	0	0	5	3	0	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCG............................	24	10	1.60	16	0	0	0	13	0	0	0	0	0	0	3	0	0	0	0	0	0
....................CGATAGCTCAGTTGG..........................................................................................................	15	10	1.60	16	0	0	0	0	0	0	0	14	1	0	1	0	0	0	0	0	0
..........................CTCAGTTGGTAGAGC....................................................................................................	15	10	1.60	16	0	0	0	0	0	0	1	0	0	0	15	0	0	0	0	0	0
..............................GTTGGTAGAGCGGTGGACTG...........................................................................................	20	10	1.60	16	0	0	0	0	0	0	1	0	0	0	0	0	0	15	0	0	0
...................................................................................TCCATAGGTCGCTGGT..........................................	16	12	1.58	19	0	0	0	0	0	0	0	0	0	1	18	0	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGAGA.......................................................................................................	22	11	1.55	17	0	0	0	10	0	0	1	4	0	0	2	0	0	0	0	0	0
................CCTTCGATAGCTCAGG.............................................................................................................	16	11	1.45	16	0	0	0	0	0	0	0	2	0	0	14	0	0	0	0	0	0
.........................GCTCAGTTGGTAGAGCGGT.................................................................................................	19	10	1.40	14	0	0	0	0	0	10	0	0	0	0	4	0	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTC.............................	24	10	1.40	14	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................GCTCAGTTGGTAGAG.....................................................................................................	15	10	1.40	14	0	0	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0
...................................................................................................TCAAATCCGGCTCGAAGGAC------................	20	15	1.40	21	15	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................TAGGTCGCTGGTTCA.......................................	15	12	1.33	16	0	0	0	0	0	0	7	8	1	0	0	0	0	0	0	0	0
..................TTCGATAGCTCAGTTGGTA........................................................................................................	19	10	1.30	13	3	0	4	1	0	0	0	0	0	0	1	4	0	0	0	0	0
........................AGCTCAGTTGGTAGAGCGG..................................................................................................	19	10	1.30	13	0	0	0	0	10	0	0	0	0	0	3	0	0	0	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCG.................................	18	10	1.30	13	3	0	1	4	0	0	0	0	0	0	5	0	0	0	0	0	0
..................TTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	27	10	1.30	13	0	0	1	12	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................AGTTGGTAGAGCGGTGG...............................................................................................	17	10	1.30	13	0	0	0	0	0	0	0	2	0	0	11	0	0	0	0	0	0
................................................................................................GGTTCAAATCCGGCTCGA...........................	18	10	1.30	13	0	0	0	2	10	0	0	0	0	0	1	0	0	0	0	0	0

dm3

AGTTTG--A-ACTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAAATTATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTA-A-TTTT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.....................................................TTG---GAAAATTATGCAA-----TAGAA...........................................................	21	1	1696.00	1696	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	4	0	0	0	0	0	0	0	0	0	1	0	1	6	0	3	0	0	0	0	2	4	0	1	2	1	4	3	1	1	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	19	20	32	0	19	2	0	8	18	7	1	1	0	0	0	0	1	0	6	2	0	0	0	0	0	0	2	4	3	13	8	4	2	0	5	0	0	9	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	1	0	0	30	10	91	3	0	1	4	19	19	8	14	1	10	3	11	1	0	5	8	7	6	0	0	0	0	0	13	0	0	0	0	0	2	1	0	0	0	0	0	1	0	1	0	0	0	0	4	50	15	0	0	0	0	0	8	0	5	0	12	0	0	0	0	4	3	1	7	0	3	5	11	0	0	4	4	0	0	0	0	0	4	1	1	3	61	25	33	8	141	23	46	273	4	10	20	1	0	0	0	0	0	1	1	0	0	1	1	0	1	1	0	0	1	0	1	0	0	0	0	9	0	0	0	1	1	3	0	0	1	3	1	0	2	1	0	0	0	1	0	1	0	1	0	1	10	8	2	1	1	1	1	22	2	0	0	1	0	4	13	24	81	0	3	0	0	10	2	39	18	8	2	1	4	8	6	0	12	1	1	2	2	0	0	0	2	0	1	0	53	3	0	2	3	0
................CCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	25	10	1362.40	13624	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	8	6	34	0	0	0	0	0	0	0	0	0	0	0	0	60	15	37	27	34	12	25	19	61	11	53	34	44	30	4	11	30	1	0	0	0	3	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	5	3	2	10	2	2	3	1	10	8	3	76	82	9	17	11	17	8	4	1	0	2	4	0	4	25	12	1	2	0	8	0	3	16	0	0	0	2	1	15	1	0	0	0	1	19	39	657	803	28	9	241	40	13	14	56	349	79	285	32	101	238	180	201	52	19	67	132	54	20	2	0	0	0	0	0	12	0	0	1	0	28	30	0	20	0	0	0	84	3	17	3	13	0	91	8	0	1	0	0	0	0	41	15	19	74	2	5	0	19	7	32	36	11	9	5	2	26	82	68	0	0	0	0	0	0	0	3	1	44	197	136	143	130	91	133	87	191	94	22	763	183	3	2	86	0	0	0	0	507	548	1	11	2	0	1	5	1	53	41	17	143	0	0	1	2	3	59	0	2	0	0	1	3	0	0	0	2	1	1	1	183	47	0	1	0	0	0	0	0	0	3	1	0	3	3	25	27	11	18	68	1215	578	137	5	14	41	69	86	211	18	11	145	175	0	0	274	76	83	7	6	6	1	11	5	7	20	4	18	0	68	142	141	44	202	101	48	79	0	22	0	2	14
................CCTTCGATAGCTCAGTTG...........................................................................................................	18	10	1298.80	12988	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	202	67	2	75	0	1	0	0	0	0	0	0	0	0	0	16	30	26	9	21	8	3	1	16	10	29	184	11	34	11	7	3	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	3	0	0	0	2	2	1	2	4	7	17	16	1	24	6	2	5	10	1	2	104	43	0	3	0	3	11	3	3	4	2	5	0	0	1	0	0	167	2	4	0	0	0	14	4	0	245	39	219	256	0	0	13	30	0	0	0	0	0	0	177	57	78	8	0	30	27	31	32	167	52	2	0	11	0	0	0	0	0	0	11	28	10	73	0	10	376	1115	0	74	1	0	0	683	5	648	7	199	0	80	2	0	16	62	0	3	0	157	89	557	161	7	0	0	212	1	137	21	0	0	0	0	0	24	100	0	0	0	0	0	0	28	30	10	42	106	752	282	0	1	113	41	0	1	0	2	5	0	0	1	0	0	0	0	73	204	13	72	8	0	2	1	0	10	5	0	0	11	8	8	7	7	223	24	9	10	55	4	9	9	12	8	36	2	50	39	3	4	5	4	0	0	0	0	0	0	0	31	3	1	13	40	23	53	45	100	245	881	1052	142	37	26	71	0	4	12	5	20	11	2	0	110	8	32	0	0	0	0	0	1	1	0	0	4	0	0	4	3	19	13	3	12	7	3	3	0	0	0
................CCTTCGATAGCTCAGTTGG..........................................................................................................	19	10	1131.30	11313	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	25	51	7	0	3	0	0	0	0	0	0	0	0	0	81	209	83	61	125	30	59	778	19	28	44	292	16	142	186	433	30	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	25	0	6	2	3	4	6	23	0	7	6	1	5	4	2	10	44	35	7	1	3	1	9	3	0	3	2	1	0	3	2	0	1	6	9	0	1	0	27	3	4	0	2	11	2	1	21	27	243	313	0	0	0	0	0	10	15	21	5	7	16	29	18	54	13	82	38	19	23	21	14	0	0	0	0	0	10	0	4	5	5	12	14	15	0	12	3	0	0	8	1	9	10	4	3	23	33	8	2	2	0	1	0	46	101	52	154	0	0	0	28	0	42	35	1	0	0	0	0	13	33	19	0	5	0	0	0	5	10	5	138	179	90	27	68	436	736	972	69	269	32	666	10	2	1	1	0	0	0	0	16	31	6	6	3	11	14	28	5	5	12	12	12	12	16	15	42	18	15	9	15	4	66	12	23	17	7	10	37	12	41	24	14	2	0	0	0	2	0	1	0	2	19	6	10	5	22	15	11	11	12	29	60	71	94	42	7	255	603	17	31	1	31	10	4	5	2	144	111	107	16	15	12	15	13	16	32	16	6	31	2	11	31	18	38	83	24	50	27	18	17	27	8	11
......................................................................................ATAGGTCGCTGGTTCAAATCC..................................	21	9	640.22	5762	0	0	0	0	0	0	1	0	1	1	3	0	1	0	0	0	0	0	0	0	0	2	2	5	16	0	0	0	0	0	0	0	0	0	0	0	11	6	41	13	2	0	27	10	37	0	42	6	41	36	11	7	28	12	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	25	12	1	31	3	0	26	35	18	14	63	24	6	1	0	0	1	3	0	3	5	3	5	0	0	12	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	17	8	13	9	28	0	23	99	254	170	47	18	87	40	67	38	1	33	34	16	13	0	0	0	0	0	0	0	0	0	0	0	6	7	0	3	0	0	0	5	0	0	0	3	0	10	0	0	0	0	0	0	2	5	22	4	26	0	0	0	5	1	4	7	0	1	1	0	3	8	20	0	0	0	0	0	0	0	0	0	10	99	3	11	373	207	67	65	856	208	194	640	2	0	0	1	0	0	0	0	7	2	0	6	0	0	0	0	0	10	11	0	15	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	2	2	6	46	76	27	0	12	22	104	65	196	2	0	6	7	0	0	223	82	118	0	0	0	0	0	0	0	0	0	0	0	23	9	19	21	40	11	19	0	0	7	1	1	0
.....................................................TTG---GAAAATTATGCAA-----TAGA............................................................	20	1	622.00	622	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	2	0	0	0	0	0	2	1	3	0	0	0	0	5	6	2	0	0	0	3	1	2	1	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	3	1	0	2	0	0	1	2	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	4	0	3	0	5	0	0	1	3	8	16	0	3	8	3	14	4	3	0	2	2	13	4	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	2	1	1	1	35	0	0	0	0	0	0	0	9	0	7	0	0	0	0	0	0	0	0	2	1	0	8	0	9	3	0	4	0	1	0	1	0	1	0	0	0	0	13	3	14	8	23	5	7	70	1	6	3	2	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	2	0	0	0	0	3	0	2	0	0	0	0	1	0	0	0	2	0	4	0	0	0	0	1	0	0	0	1	1	0	4	2	0	0	0	2	0	5	1	1	0	2	3	9	28	9	42	1	3	1	2	1	0	30	25	11	0	2	2	0	0	0	3	1	0	0	1	0	2	1	0	1	2	1	4	0	1	0	1	0
......................................................................................ATAGGTCGCTGGTTCAAAT....................................	19	9	483.56	4352	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	6	5	17	0	0	0	0	0	0	0	0	0	0	0	8	0	38	7	5	1	32	4	31	0	60	3	31	33	5	2	10	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	8	3	1	12	1	1	3	6	2	0	46	14	3	1	2	0	0	3	0	0	1	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	1	0	0	38	192	528	255	38	39	192	82	233	65	3	30	17	30	22	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	0	1	0	3	0	1	0	1	0	0	0	0	0	0	0	10	30	4	23	3	0	0	7	0	2	6	0	0	0	0	0	4	5	0	0	0	0	0	0	0	0	0	17	76	7	25	112	66	41	21	204	62	61	196	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	2	1	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	2	2	0	8	43	36	0	1	29	66	84	237	1	0	1	3	0	0	302	84	145	0	0	0	1	0	0	0	0	0	0	0	14	5	11	19	34	3	15	0	0	4	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCA.......................................	20	10	411.40	4114	0	0	0	0	1	15	0	0	0	14	20	0	15	0	0	0	0	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	3	14	1	0	8	0	8	7	20	494	85	3	406	17	28	216	200	138	97	280	349	85	31	7	9	9	37	12	20	63	6	14	23	1	86	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	8	0	8	0	0	0	8	0	1	0	1	0	6	0	0	0	0	0	0	2	9	5	0	1	0	0	0	6	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	4	856	23	21	12	10	0	3	4	11	2	12	2	0	0	3	0	0	0	0	6	1	0	2	0	0	1	1	0	0	1	0	1	0	3	0	1	1	2	0	0	0	0	0	0	1	0	0	0	1	1	1	3	1	0	0	0	0	0	1	0	0	1	1	0	0	0	1	0	0	0	0	9	62	102	0	0	0	0	0	0	0	2	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	3	0	1	0	0	1	0
.................................................................................................GTTCAAATCCGGCTCGAA..........................	18	10	242.20	2422	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	0	0	0	0	0	0	0	0	0	0	0	6	1	9	6	5	0	9	0	0	0	9	2	2	10	1	0	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	9	1	0	3	0	1	1	2	4	0	15	8	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	3	0	1	0	1	0	1	0	1	1	0	0	0	0	2	2	0	0	0	0	0	0	29	80	64	33	18	8	46	13	43	21	2	7	2	5	0	0	0	0	0	0	4	0	0	1	3	0	3	5	0	10	0	1	8	2	1	1	0	3	0	15	0	0	3	0	0	0	10	15	16	11	26	1	0	0	9	0	16	26	0	0	0	0	0	2	2	0	0	0	5	0	0	1	0	0	2	31	10	41	16	12	2	4	16	16	3	17	1	0	0	1	0	0	0	0	19	22	1	6	1	0	0	0	0	2	1	0	4	0	1	0	0	0	1	0	1	0	0	1	0	0	0	0	1	0	0	0	1	3	0	0	0	0	0	0	0	0	1	0	0	0	0	3	3	0	1	178	41	79	75	5	8	6	32	76	269	18	1	29	62	1	0	169	113	122	0	0	0	0	0	0	0	0	0	1	0	21	11	23	14	45	9	31	1	0	32	1	1	0
................CCTTCGATAGCTCAGTTGGTAGA......................................................................................................	23	10	228.60	2286	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	7	0	0	0	0	0	0	0	0	0	0	0	0	3	2	7	4	3	1	1	2	1	0	9	4	6	4	1	1	2	0	0	0	0	2	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	2	2	1	15	6	0	6	6	0	7	4	71	34	8	19	0	0	0	0	1	0	0	1	4	3	0	7	0	2	0	5	0	0	0	0	2	0	1	0	0	0	1	0	2	3	32	38	3	0	29	10	1	2	4	47	19	36	12	5	27	23	17	7	2	6	2	5	2	0	0	0	0	0	0	0	0	0	0	12	0	4	0	2	0	0	0	3	1	0	0	1	0	0	1	0	1	3	0	0	0	8	5	3	12	0	2	0	2	3	12	3	1	0	1	2	1	16	16	0	0	1	8	0	0	2	0	1	7	151	5	7	95	30	23	24	152	46	45	100	0	0	0	0	0	0	0	0	39	16	0	7	1	0	0	0	0	10	40	0	2	0	0	3	1	7	3	1	1	0	3	1	2	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	1	1	7	1	4	15	5	55	79	68	49	4	7	6	11	10	19	1	3	13	3	0	0	16	5	4	10	3	6	3	6	7	5	17	1	13	2	18	128	14	9	12	19	12	42	1	3	3	1	0
.................................................................................................GTTCAAATCCGGCTCGAAG.........................	19	10	192.80	1928	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	3	0	1	0	3	2	2	0	1	0	0	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	3	9	6	0	8	2	0	28	18	11	5	23	9	0	4	0	0	4	0	0	2	5	0	5	1	0	14	0	2	8	0	1	0	0	1	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	16	9	21	13	5	6	9	15	3	5	2	0	0	4	0	0	0	0	0	0	0	0	0	0	0	9	10	0	9	0	0	1	9	0	1	0	1	0	20	0	0	0	3	0	0	8	4	7	2	16	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	4	0	0	1	0	0	2	17	25	9	4	6	1	1	2	2	1	4	0	0	0	0	0	0	0	0	14	17	0	3	0	0	0	0	0	0	1	0	6	0	0	1	0	0	1	0	0	0	0	1	0	1	0	0	0	0	1	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	3	89	56	142	130	3	11	3	14	30	138	13	4	93	175	1	0	35	36	71	0	5	1	0	0	2	1	3	0	0	0	58	11	18	11	36	23	113	3	0	51	3	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCG.................................	22	9	186.00	1674	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	9	8	0	0	0	0	0	0	0	0	0	0	0	6	1	28	8	6	1	14	11	19	0	26	0	13	19	8	4	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	4	0	0	1	1	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	1	0	1	7	10	7	10	0	18	79	197	26	18	29	49	32	49	25	5	9	12	15	11	0	0	0	0	0	0	0	0	0	0	0	3	2	0	2	0	0	0	3	0	0	0	2	0	4	0	0	0	0	0	0	0	3	13	3	9	0	0	0	1	0	0	4	0	0	0	0	0	3	19	0	0	0	0	0	0	0	0	0	7	23	0	9	25	16	9	4	74	26	15	79	7	0	0	6	0	0	0	0	0	0	0	1	0	0	0	0	0	7	4	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	3	20	12	9	0	1	8	26	26	81	1	0	0	1	0	0	132	21	56	0	0	0	0	0	0	0	0	0	0	0	6	6	5	6	9	2	6	1	0	15	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCA.......................................	19	10	174.60	1746	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	2	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	2	4	2	75	15	88	25	2	103	13	7	60	65	67	91	84	105	27	12	8	12	23	270	35	89	26	8	10	29	22	67	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	3	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	3	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	133	4	1	1	10	1	8	0	8	1	6	0	0	0	0	1	0	0	0	5	1	0	1	0	0	0	1	1	0	1	0	0	0	2	6	0	0	0	0	2	1	0	0	0	0	6	1	2	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	1	0	0	5	6	8	0	0	1	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	1	0
..................................................................................ATCCATAGGTCGCTGGTTC........................................	19	10	160.90	1609	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	19	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	1	0	0	0	1	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	2	2	1	8	0	0	0	0	3	3	25	101	52	1	74	16	7	83	78	136	181	81	95	22	9	2	4	7	11	3	11	31	6	4	11	0	68	0	2	1	0	0	0	0	0	0	0	1	0	0	0	0	0	17	27	0	0	0	0	0	3	0	4	1	0	6	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	14	0	10	0	0	2	6	1	0	1	0	0	5	0	0	0	0	0	0	2	5	4	0	2	0	0	0	6	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	113	9	9	8	12	3	11	1	7	0	18	2	0	0	1	0	0	0	0	7	9	0	3	0	0	0	1	2	1	1	0	2	0	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	2	1	2	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	4	9	17	12	0	0	1	0	1	1	0	0	1	2	2	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	1	1	0	0	1	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	28	10	156.70	1567	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	3	0	0	1	1	1	0	0	3	0	0	0	0	22	10	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	3	4	1	0	0	3	4	4	3	0	0	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	3	0	0	0	1	0	17	13	29	5	31	61	24	7	7	120	12	0	1	11	0	0	0	0	9	10	0	1	0	0	0	0	0	0	1	0	1	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	5	8	2	3	0	0	0	1	4	0	0	0	1	0	0	3	0	0	0	0	2	0	0	1	0	1	1	2	0	6	5	1	1	1	2	1	1035	0	0	0	0	0
....................................................................................................CAAATCCGGCTCGAAGGAT------T...............	20	5	130.40	652	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	1	6	5	1	2	1	2	4	2	3	4	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	10	10	9	0	1	0	0	4	1	1	5	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	9	0	25	7	9	5	0	0	2	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	1	3	1	0	5	2	2	4	4	3	2	0	2	0	2	0	0	0	0	0	16	0	0	4	10	0	1	3	0	2	0	0	0	2	0	1	0	1	0	3	0	0	4	3	0	0	0	8	13	1	1	0	0	0	3	0	1	4	0	0	0	0	0	0	10	0	0	0	0	0	0	1	0	7	10	9	7	7	9	12	6	3	9	17	7	19	5	0	0	3	0	0	0	0	0	0	5	0	0	2	5	3	2	0	0	2	4	1	4	3	2	3	0	5	15	4	14	1	3	2	5	16	11	3	21	5	11	7	0	0	0	0	0	0	0	0	6	0	2	0	9	2	6	2	2	2	1	1	0	3	0	2	1	0	1	1	1	0	0	0	0	3	1	1	5	1	3	1	0	2	1	3	0	0	1	0	0	1	0	3	0	0	2	3	1	8	4	0
...................TCGATAGCTCAGTTGGTAGA......................................................................................................	20	10	125.20	1252	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	2	0	0	0	0	0	0	0	0	0	0	0	0	4	4	6	3	2	0	7	1	4	0	8	0	5	7	1	2	5	1	0	0	0	9	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	3	0	0	2	1	0	0	2	2	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	2	4	0	0	2	0	0	0	22	71	29	125	9	3	23	18	23	6	2	7	4	6	1	1	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	1	0	0	0	0	0	4	0	0	0	0	0	0	0	2	10	2	14	0	0	0	0	0	2	13	0	0	0	0	0	0	7	0	0	2	2	0	0	0	2	0	13	37	1	7	18	6	8	7	41	9	4	63	1	0	0	2	1	0	0	0	3	6	0	1	1	0	0	1	1	2	17	2	8	0	0	1	0	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	3	0	5	3	9	3	10	9	0	3	13	61	9	34	1	1	2	1	0	0	81	30	25	2	1	3	0	0	2	1	1	1	2	0	12	59	19	4	21	10	10	10	1	3	0	0	0
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.............................AGTTGGTAGAGCGGTGGAC.............................................................................................	19	10	45.70	457	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	5	2	2	0	0	0	0	2	0	0	1	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	2	0	1	0	3	0	1	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	3	2	3	0	1	5	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	3	0	0	26	15	5	8	4	1	12	5	6	1	7	3	1	0	0	3	0	0	0	0	4	0	0	1	0	0	0	1	0	0	0	0	1	1	1	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	1	17	3	4	4	3	0	3	10	5	4	1	0	2	4	0	0	26	17	17	0	3	24	0	1	3	2	5	5	14	1	2	9	2	0	0	8	2	74	2	2	0	0	3
................CCTTCGATAGCTCAGTTGT..........................................................................................................	19	10	43.90	439	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	0	0	2	0	0	0	0	0	0	0	0	0	1	7	2	1	2	0	2	14	0	2	5	9	0	9	10	17	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	4	0	0	0	0	1	0	0	0	15	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	2	0	3	0	2	2	0	3	8	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	1	5	0	0	0	0	0	2	3	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	5	17	6	2	1	15	45	50	1	4	0	30	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	9	32	28	0	1	4	8	0	0	0	1	0	0	0	0	2	1	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...................TCGATAGCTCAGTTGGTAGAGC....................................................................................................	22	10	43.50	435	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	2	0	0	0	0	0	0	0	0	0	0	0	0	3	0	4	2	0	0	1	1	2	0	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	2	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	12	0	2	6	2	1	1	12	27	6	36	0	4	9	12	6	1	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	5	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	3	0	0	0	0	0	0	5	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	6	3	2	0	5	0	5	3	2	0	1	31	1	0	0	1	0	0	0	0	6	11	1	1	0	0	0	0	0	2	3	0	4	0	0	1	0	0	1	0	0	0	3	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	1	4	9	3	0	0	2	11	3	18	0	0	0	4	0	0	39	7	5	3	0	1	0	0	0	0	0	0	0	0	4	4	3	1	3	2	1	5	0	0	0	1	0
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..............................GTTGGTAGAGCGGTGGAC.............................................................................................	18	10	29.80	298	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	3	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	2	2	0	0	4	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	2	2	2	0	3	4	0	0	0	0	0	0	0	0	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	7	4	11	11	0	0	4	4	1	1	1	0	0	0	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	13	1	3	0	2	0	4	6	4	9	2	2	0	1	0	0	22	11	6	0	1	6	3	0	3	0	4	4	8	0	1	0	1	0	1	2	0	74	0	1	0	1	0
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..............AACCTTCGATAGCTCAGTTGGTAGA......................................................................................................	25	5	29.60	148	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	1	0	0	1	1	1	1	1	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	6	7	0	5	1	0	1	2	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	2	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	1	6	0	6	0	4	2	6	4	5	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	9	2	11	0	0	0	0	0	0	9	0	4	1	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	3	0	1	1	0	0
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........................AGCTCAGTTGGTAGAGCGGTGGACTG...........................................................................................	26	10	27.20	272	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	0	3	4	2	3	1	2	0	1	1	2	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	8	1	0	0	2	0	3	0	0	0	0	2	1	0	0	0	1	2	0	1	1	0	0	0	0	0	0	0	0	2	3	0	1	3	0	0	0	0	0	2	0	0	9	2	0	0	1	6	2	1	0	0	0	0	6	5	2	5	5	11	7	4	2	10	24	3	13	2	2	14	6	6	0	4	8	23	2	1	10	0	0
..............AACCTTCGATAGCTCAGTTGG..........................................................................................................	21	5	27.00	135	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	4	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	1	1	1	5	2	1	5	17	2	3	8	2	0	0	4	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	2	1	0	0	1	0	0	1	1	0	0	1	0	0	1	0	3	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	1	0	0	2	0	1	11	0	4	0	0	0	0	0	0	10	0	0	0	1	1	0	0	1	2	0	1	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0
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.................CTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	24	10	17.50	175	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	2	0	4	2	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	8	0	0	5	0	0	0	1	2	0	0	0	0	0	3	6	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	2	2	2	1	5	3	10	5	4	2	2	16	2	0	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	6	1	0	0	0	1	1	1	0	0	1	3	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	3	1	3	0	2	2	1	2	0	1	0	0	0
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...............................................................................................TGGTTCAAATCCGGCTCGAAGGA.......................	23	10	10.00	100	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	1	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	6	4	3	1	7	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	5	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	0	1	0	0	1	0	0	1	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	2	3	1	2	0	4	8	2	0	3	0	1	0
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..................................................................................ATCCATAGGTCGCTGGTTCATC.....................................	22	10	9.00	90	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	2	0	13	0	0	6	8	1	0	4	5	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................GACTGTAGTTG---GAAAATTATGCAA-----................................................................	24	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCT..............................	25	9	8.89	80	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	7	7	0	0	1	1	0	1	3	1	2	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	2	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	3	6	2	0	0	16	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	1	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................CTCAGTTGGTAGAGCGGTGG...............................................................................................	20	10	8.70	87	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	5	4	0	0	3	1	2	1	2	2	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	2	0	2	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	1	1	1	3	0	4	0	0	0	1	4	2	0	0	1	0	1	0	2	0	16	1	0	2	1	0

droEug1

CCC-AG--C-ACGCCCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAA-ACATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTT-G-TTTT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CCC-AG--C-ACACCCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAA-ACATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTT-T-TTTT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CCAGTA--A-TTTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GTACAAAATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTT-T-CTTT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CACGTG--A-TTTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAA-ACATGCGA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTA-TGTT-TCCTTT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CCCATA--A-ACTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGCTG---GAAA-ATGTACAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTT-TTATTT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CACATG--G-TTTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAACATATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TGTC-A-TTTT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

ACTCTT--A----AGACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTGTTGGAAATAATTGCGA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------GTTT---------TTT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

CCTTCG--T-TTTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAACATATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTTTTG--------T	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.................................................................................................GTTCAAATCCGGCTCGAA..........................	18	8	567.50	4540	442	52	35	218	358	3435
................CCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	25	8	434.88	3479	153	1832	173	83	739	499
................CCTTCGATAGCTCAGTTGGTAGA......................................................................................................	23	8	414.38	3315	68	194	49	156	226	2622
.................................................................................................GTTCAAATCCGGCTCGAAG.........................	19	8	269.75	2158	440	154	37	90	595	842
..................TTCGATAGCTCAGTTGGTAGA......................................................................................................	21	8	257.88	2063	8	14	27	87	97	1830
................CCTTCGATAGCTCAGTTGGAGA.......................................................................................................	22	9	94.56	851	17	0	0	0	83	751
................CCTTCGATAGCTCAGTTGGTAG.......................................................................................................	22	8	91.63	733	39	24	54	58	10	548
......................................................................................ATAGGTCGCTGGTTCAAATCC..................................	21	8	88.00	704	125	309	22	13	6	229
................CCTTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	28	8	85.63	685	16	7	0	0	47	615
....................CGATAGCTCAGTTGGTAGA......................................................................................................	19	8	61.63	493	2	14	19	24	29	405
..................TTCGATAGCTCAGTTGGTAG.......................................................................................................	20	8	58.50	468	10	6	57	20	5	370
...................TCGATAGCTCAGTTGGTAGA......................................................................................................	20	8	50.25	402	4	0	3	12	23	360
........................................................................................AGGTCGCTGGTTCAAATCC..................................	19	8	49.63	397	142	241	10	0	0	4
.....................................................................................CATAGGTCGCTGGTTCAAATCC..................................	22	8	45.00	360	76	112	11	10	14	137
........................................................................................AGGTCGCTGGTTCAAATCCGG................................	21	8	43.63	349	75	206	59	0	3	6
.......................................................................................TAGGTCGCTGGTTCAAATCC..................................	20	8	42.38	339	84	176	12	2	6	59
.....................GATAGCTCAGTTGGTAGA......................................................................................................	18	8	38.25	306	5	9	34	9	5	244
.........................................................................................GGTCGCTGGTTCAAATCC..................................	18	8	37.63	301	91	143	21	0	1	45
......................................................................................ATAGGTCGCTGGTTCAAATCCGG................................	23	8	32.75	262	69	149	22	0	4	18
................................................................................................GGTTCAAATCCGGCTCGAAG.........................	20	8	32.00	256	58	20	2	8	11	157
................CCTTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	29	8	31.50	252	0	18	17	1	74	142
......................................................................................ATAGGTCGCTGGTTCAAATC...................................	20	8	31.25	250	70	11	1	3	10	155
................CCTTCGATAGCTCAGTTGG..........................................................................................................	19	8	31.13	249	57	5	26	50	30	81
........................................................................................AGGTCGCTGGTTCAAATC...................................	18	8	27.50	220	111	14	1	5	3	86
..................TTCGATAGCTCAGTTGGTAGAGC....................................................................................................	23	8	26.38	211	5	143	9	3	31	20
.................................................................................................GTTCAAATCCGGCTCGAG..........................	18	8	24.00	192	107	0	0	13	66	6
..................TTCGATAGCTCAGTTGGTAGAG.....................................................................................................	22	8	23.63	189	1	19	32	4	12	121
................................................................................................GGTTCAAATCCGGCTCGAA..........................	19	8	23.38	187	91	19	2	13	9	53
................CCTTCGATAGCTCAGTTGGTA........................................................................................................	21	8	23.13	185	11	36	15	19	9	95
.................................................................................................GTTCAAATCCGGCTCGAAGGA.......................	21	8	23.13	185	44	12	0	10	13	106
.....................................................................................CATAGGTCGCTGGTTCAAATC...................................	21	8	22.75	182	25	6	0	4	2	145
...................TCGATAGCTCAGTTGGTAG.......................................................................................................	19	8	21.63	173	7	1	3	7	1	154
................CCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	24	8	20.25	162	14	68	15	7	17	41
.......................................................................................TAGGTCGCTGGTTCAAATC...................................	19	8	19.75	158	58	11	3	2	5	79
.................................................................................................GTTCAAATCCGGCTCGAAGG........................	20	8	19.25	154	67	10	1	4	43	29
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG................................	27	8	18.50	148	60	81	6	0	0	1
......................ATAGCTCAGTTGGTAGAG.....................................................................................................	18	8	18.38	147	4	3	1	0	11	128
..................................................................................ATCCATAGGTCGCTGGTTCAAATCC..................................	25	8	17.88	143	46	96	0	0	0	1
.........................................................................................GGTCGCTGGTTCAAATCCGG................................	20	8	17.75	142	35	77	19	0	0	11
................................................................................................GGTTCAAATCCGGCTCGAAGGA.......................	22	8	16.38	131	7	1	0	3	1	119
................CCTTCGATAGCTCAGTTGGT.........................................................................................................	20	8	16.25	130	3	64	30	5	10	18
.......................................................................................TAGGTCGCTGGTTCAAATCCGG................................	22	8	16.25	130	33	82	8	0	2	5
........................................................................................AGGTCGCTGGTTCAAATCCGGC...............................	22	8	16.13	129	8	119	1	0	0	1
................CCTTCGATAGCTCAGTTG...........................................................................................................	18	8	15.25	122	22	3	9	76	0	12
...............................................................................................TGGTTCAAATCCGGCTCGAA..........................	20	8	15.25	122	60	15	2	6	10	29
..................................................................................ATCCATAGGTCGCTGGTTCA.......................................	20	8	13.38	107	90	10	2	5	0	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGG................................	24	8	13.13	105	39	60	2	0	1	3
...............................................................................................TGGTTCAAATCCGGCTCGAAG.........................	21	8	12.75	102	29	28	8	4	12	21
..................................................................................ATCCATAGGTCGCTGGTTC........................................	19	8	11.00	88	27	52	8	0	0	1
................CCTTCGATAGCTCAGTTGGTAGG......................................................................................................	23	8	10.75	86	2	0	0	3	36	45
.....................GATAGCTCAGTTGGTAGAGC....................................................................................................	20	8	10.00	80	1	44	6	8	11	10
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG.........................	28	8	10.00	80	19	60	0	0	0	1
.................................................................................................GTTCAAATCCGGCTCGAAGGAC------C...............	23	11	10.00	110	49	24	0	0	7	30
....................CGATAGCTCAGTTGGTAGAGC....................................................................................................	21	8	9.88	79	1	44	13	0	14	7
..............................................................................................CTGGTTCAAATCCGGCTCGAAGGAC------C...............	26	8	9.75	78	2	73	0	1	0	2
..........................................................................................GTCGCTGGTTCAAATCCGGC...............................	20	8	9.25	74	2	71	1	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG.........................	27	8	9.25	74	21	53	0	0	0	0
....................CGATAGCTCAGTTGGTAG.......................................................................................................	18	8	9.13	73	0	2	2	3	0	66
..................................................................................................TTCAAATCCGGCTCGAAG.........................	18	8	9.00	72	51	2	5	1	6	7
......................ATAGCTCAGTTGGTAGAGC....................................................................................................	19	8	8.75	70	3	21	2	28	2	14
.......................................................................................TAGGTCGCTGGTTCAAATCCGGC...............................	23	8	8.63	69	7	61	0	0	0	1
......................................................................................ATAGGTCGCTGGTTCAAATCCGGC...............................	24	8	8.50	68	3	64	1	0	0	0
.................................................................................................GTTCAAATCCGGCTCGAAGGAC------................	22	8	8.38	67	29	5	0	2	5	26
.................CTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	24	8	8.13	65	13	47	1	0	4	0
............................................................................................CGCTGGTTCAAATCCGGCTCGAAGGAC------C...............	28	8	7.50	60	1	54	0	0	0	5
........................................................................................AGGTCGCTGGTTCAAATCCGGCTC.............................	24	8	7.38	59	5	53	1	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGC...............................	21	8	7.38	59	4	51	3	0	0	1
......................................................................................ATAGGTCGCTGGTTCAAATCCG.................................	22	8	6.88	55	17	1	3	2	3	29
................................................................................................GGTTCAAATCCGGCTCGA...........................	18	8	6.63	53	40	10	0	3	0	0
..................................................................................ATCCATAGGTCGCTGGTTCATCC....................................	23	8	6.63	53	11	42	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGGC...............................	28	8	6.63	53	2	51	0	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCA.......................................	19	8	6.38	51	36	6	5	3	1	0
..................TTCGATAGCTCAGTTGGTAGG......................................................................................................	21	8	6.25	50	1	0	0	3	8	38
.......................................................................................TAGGTCGCTGGTTCAAATCCGGCTC.............................	25	8	6.25	50	10	38	2	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCCGG................................	26	8	6.13	49	20	28	1	0	0	0
......................................................................................ATAGGTCGCTGGTTCATC.....................................	18	10	5.90	59	8	0	0	0	2	49
..................TTCGATAGCTCAGTTGGTA........................................................................................................	19	8	5.88	47	1	2	2	6	3	33
...................TCGATAGCTCAGTTGGTAGAG.....................................................................................................	21	8	5.75	46	0	1	2	1	1	41
....................................................................................................CAAATCCGGCTCGAAGGAT------TT..............	21	3	5.33	16	12	0	0	0	0	4
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCTC.............................	26	8	5.25	42	4	37	0	0	0	1
..........................................................................................GTCGCTGGTTCAAATCCGG................................	19	8	5.00	40	18	18	1	0	0	3
.....................GATAGCTCAGTTGGTAGAG.....................................................................................................	19	8	5.00	40	0	16	2	2	3	17
.............................................GACTGTAGTTG---GAAACATATGC.......................................................................	22	1	5.00	5	0	4	1	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTC.............................	23	8	5.00	40	3	32	2	0	0	3
...................................................................................TCCATAGGTCGCTGGTTCAAATCC..................................	24	8	4.88	39	9	29	0	0	0	1
........................................................................................AGGTCGCTGGTTCAAATCCGGCT..............................	23	8	4.88	39	12	23	3	0	0	1
...............................................................................................TGGTTCAAATCCGGCTCGAAGGA.......................	23	8	4.75	38	4	1	1	2	2	28
....................................................................................................CAAATCCGGCTCGAAGGAT------T...............	20	4	4.50	18	8	3	0	1	0	6
.....................................................................................CATAGGTCGCTGGTTCAAATCCGGC...............................	25	8	4.50	36	3	32	0	0	1	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGGCTC.............................	27	8	4.50	36	4	32	0	0	0	0
....................CGATAGCTCAGTTGGTAGAG.....................................................................................................	20	8	4.38	35	1	8	10	1	0	15
.........................................................................................GGTCGCTGGTTCAAATCCG.................................	19	8	4.25	34	11	4	5	0	0	14
..........................................................................................GTCGCTGGTTCAAATCCGGCT..............................	21	8	4.25	34	9	24	1	0	0	0
...........................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGAC------C...............	29	8	4.25	34	0	33	0	0	1	0
................CCTTCGATAGCTCAGTTGGTAGAGCGTG.................................................................................................	28	8	4.13	33	1	2	0	0	22	8
................................................................................................GGTTCAAATCCGGCTCGAAGG........................	21	8	4.13	33	6	0	0	1	3	23
................CCTTCGATAGCTCAGTTGGTAGAGCGT..................................................................................................	27	8	4.13	33	13	0	0	0	6	14
...................TCGATAGCTCAGTTGGTAGAGC....................................................................................................	22	8	4.00	32	3	18	1	0	6	4
.............................................GACTGTAGTTG---GAAACATATGCA......................................................................	23	1	4.00	4	0	2	0	0	0	2
..............................................................................................CTGGTTCAAATCCGGCTCGAA..........................	21	8	4.00	32	15	11	0	1	4	1
.....................................................TTG---GAAACATATGCAA-----TAGAA...........................................................	21	1	4.00	4	0	3	1	0	0	0
..................TTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	27	8	3.88	31	1	1	0	0	1	28
........................................................................................AGGTCGCTGGTTCAAATCCG.................................	20	8	3.88	31	14	7	3	0	0	7
................................................................................................GGTTCAAATCCGGCTCGG...........................	18	8	3.88	31	29	0	0	2	0	0
...............................................................................................TGGTTCAAATCCGGCTCGA...........................	19	8	3.75	30	12	7	0	1	9	1
.......................................................................................TAGGTCGCTGGTTCAAATCCGGCT..............................	24	8	3.75	30	11	14	0	0	3	2
.......................................................................................TAGGTCGCTGGTTCAAATCCGGCTCGAAG.........................	29	8	3.75	30	0	29	0	0	0	1
.........................................................................................GGTCGCTGGTTCAAATCCGGCT..............................	22	8	3.63	29	10	18	1	0	0	0
................................................................................................GGTTCAAATCCGGCTCGAAGGAC------................	23	8	3.50	28	6	9	1	0	0	12
..........................CTCAGTTGGTAGAGCGGT.................................................................................................	18	8	3.50	28	0	0	0	0	0	28
..............................GTTGGTAGAGCGGTGGAC.............................................................................................	18	8	3.50	28	2	4	0	0	3	19
................................................................................................GGTTCAAATCCGGCTCGAG..........................	19	8	3.50	28	24	0	0	1	3	0
......................................................................................ATAGGTCGCTGGTTCAAAT....................................	19	8	3.25	26	11	5	0	2	1	7
................CCTTCGATAGCTCAGTTGGAG........................................................................................................	21	8	3.13	25	21	1	0	0	0	3
.................CTTCGATAGCTCAGTTGGTAGA......................................................................................................	22	8	3.13	25	7	5	1	1	3	8
...................................................................................TCCATAGGTCGCTGGTTCAAATCCGGCTC.............................	29	8	3.00	24	0	23	0	0	0	1
.......................................................................................TAGGTCGCTGGTTCAAATCCG.................................	21	8	3.00	24	14	1	0	0	2	7
..............................................................................................CTGGTTCAAATCCGGCTCGAAG.........................	22	8	3.00	24	11	12	0	0	0	1
................CCTTCGATAGCTCAGTTGGTAGAGCGG..................................................................................................	27	8	3.00	24	8	4	0	0	1	11
..............................................................................................CTGGTTCAAATCCGGCTC.............................	18	8	3.00	24	1	23	0	0	0	0
.....................................................................................CATAGGTCGCTGGTTCATC.....................................	19	9	2.89	26	2	0	0	0	0	24
..................TTCGATAGCTCAGTTGGT.........................................................................................................	18	8	2.88	23	0	5	3	7	0	8
................CCTTCGATAGCTCAGTTGT..........................................................................................................	19	8	2.88	23	12	0	0	6	4	1
.............................AGTTGGTAGAGCGGTGGA..............................................................................................	18	8	2.88	23	0	0	1	0	0	22
................CCTTCGATAGCTCAGTTGGC.........................................................................................................	20	8	2.75	22	0	20	1	0	0	1
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGGCT..............................	29	8	2.75	22	1	21	0	0	0	0
...............................................................................................TGGTTCAAATCCGGCTCGAG..........................	20	8	2.75	22	17	0	0	1	4	0
.............................................................................................GCTGGTTCAAATCCGGCTCGAAGGAC------C...............	27	8	2.63	21	2	18	0	0	0	1

droBip1

CCACCG--T-TTTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GAAA--CTTGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTTTTG-----ATAT	Size	Hit Count	Total Norm	Total
No Reads

dp5

ACT-GG--A-ATTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGATA---GAAACACGTGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAG------TTTT-TTTT-TTGGTG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.......................................GCGGTGGACTGTAGATC---..................................................................................	17	4	193.50	774	0	0	0	0	0	0	0	0	3	771
.................................................................................................GTTCAAATCCGGCTCGAAG.........................	19	9	152.33	1371	0	1096	39	4	61	2	167	0	0	2
................CCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	25	9	136.78	1231	0	393	470	27	240	21	65	10	1	4
......................................................................................ATAGGTCGCTGGTTCAAATCCGG................................	23	9	59.67	537	0	275	140	5	115	0	2	0	0	0
................CCTTCGATAGCTCAGTTGGTAGA......................................................................................................	23	9	57.22	515	0	154	135	0	152	8	27	0	7	32
.....................................................................................CATAGGTCGCTGGTTCAAATCCGG................................	24	9	54.56	491	0	371	91	15	14	0	0	0	0	0
.....................................................ATA---GAAACACGTGCAA-----TAGAA...........................................................	21	1	53.00	53	0	25	1	0	6	0	4	6	11	0
.......................................GCGGTGGACTGTAGATC---C.................................................................................	18	8	47.50	380	0	6	1	0	0	0	1	0	6	366
........................................................................................AGGTCGCTGGTTCAAATCCGG................................	21	9	42.00	378	0	181	90	2	103	0	2	0	0	0
.................................................................................................GTTCAAATCCGGCTCGAA..........................	18	9	39.22	353	0	288	14	0	30	3	18	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCC..................................	21	9	33.89	305	0	142	108	13	37	2	2	0	1	0
................CCTTCGATAGCTCAGTTGG..........................................................................................................	19	9	33.89	305	0	227	5	0	46	6	14	2	4	1
......................................AGCGGTGGACTGTAGATC---..................................................................................	18	4	25.75	103	0	0	0	0	0	0	1	3	7	92
.....................................................................................CATAGGTCGCTGGTTCAAATCC..................................	22	9	24.78	223	0	106	80	7	19	2	9	0	0	0
......................ATAGCTCAGTTGGTAGAGCGGTGGA..............................................................................................	25	9	23.00	207	0	85	4	1	31	9	64	5	7	1
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG................................	27	9	19.44	175	0	92	68	3	10	0	2	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCC..................................	19	9	18.89	170	0	119	38	2	11	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAG.......................................................................................................	22	9	18.56	167	0	35	12	0	111	2	3	0	2	2
.....................................................ATA---GAAACACGTGCAA-----TAGAC...........................................................	21	1	17.00	17	0	6	7	1	2	0	1	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCC..................................	18	9	16.89	152	0	119	19	2	12	0	0	0	0	0
........................................CGGTGGACTGTAGATC---..................................................................................	16	4	16.75	67	0	0	0	0	0	0	0	3	1	63
................CCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	24	9	16.67	150	0	82	33	2	28	1	2	0	2	0
.....................................................ATA---GAAACACGTGCAA-----TAGAAA..........................................................	22	1	16.00	16	0	13	2	0	1	0	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGG................................	20	9	15.67	141	0	77	13	0	51	0	0	0	0	0
......................................AGCGGTGGACTGTAGATC---C.................................................................................	19	4	14.50	58	0	2	1	0	0	0	2	3	4	46
................CCTTCGATAGCTCAGTTG...........................................................................................................	18	9	13.56	122	0	80	0	0	31	7	2	0	2	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGG................................	22	9	12.67	114	0	49	31	0	33	0	1	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG.........................	27	9	12.67	114	0	106	7	1	0	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	29	9	12.33	111	0	0	39	4	46	0	22	0	0	0
..................................................................................................TTCAAATCCGGCTCGAAG.........................	18	9	11.56	104	0	94	0	0	9	0	1	0	0	0
....................CGATAGCTCAGTTGGTAGA......................................................................................................	19	9	11.44	103	0	20	3	0	69	2	6	0	0	3
.....................GATAGCTCAGTTGGTAGA......................................................................................................	18	9	9.89	89	0	16	0	0	69	0	0	0	0	4
..................................................................................ATCCATAGGTCGCTGGTTC........................................	19	9	9.56	86	0	62	13	1	8	2	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCA.......................................	20	9	9.11	82	0	75	1	0	3	3	0	0	0	0
....................................................................................................CAAATCCGGCTCGAAGGAG------TT..............	21	1	9.00	9	0	8	0	0	1	0	0	0	0	0
.....................................................ATA---GAAACACGTGCAA-----TAGA............................................................	20	1	9.00	9	0	6	1	0	0	0	2	0	0	0
..................TTCGATAGCTCAGTTGGTAGA......................................................................................................	21	9	9.00	81	1	16	12	0	39	1	6	0	0	6
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCG............................	24	9	8.44	76	0	75	1	0	0	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGT.........................................................................................................	20	9	7.89	71	0	21	7	0	36	1	4	0	2	0
.................CTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	24	9	7.44	67	0	53	10	1	3	0	0	0	0	0
.................................................................................................GTTCAAATCCGGCTCGAAGG........................	20	9	6.89	62	0	57	3	0	0	0	2	0	0	0
......................ATAGCTCAGTTGGTAGAG.....................................................................................................	18	9	6.67	60	3	56	0	0	0	0	1	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCT..............................	22	9	6.56	59	0	55	1	2	1	0	0	0	0	0
......................ATAGCTCAGTTGGTAGAGC....................................................................................................	19	9	6.44	58	0	44	0	0	3	8	3	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCC..................................	20	9	6.44	58	0	22	27	2	4	0	3	0	0	0
................CCTTCGATAGCTCAGTTGGTA........................................................................................................	21	9	6.33	57	0	31	9	0	13	2	2	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTC.............................	23	9	6.22	56	0	46	6	4	0	0	0	0	0	0
......................................................TA---GAAACACGTGCAA-----TAGAA...........................................................	20	1	6.00	6	0	5	0	0	0	0	1	0	0	0
..................TTCGATAGCTCAGTTGGTAG.......................................................................................................	20	9	5.89	53	0	2	2	0	47	2	0	0	0	0
..................TTCGATAGCTCAGTTGGTAGAG.....................................................................................................	22	9	5.33	48	0	6	7	0	35	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCT..............................	23	9	5.22	47	0	40	4	3	0	0	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCC..................................	25	9	5.00	45	0	19	25	1	0	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	28	9	5.00	45	0	11	15	0	7	0	12	0	0	0
....................................................................................................CAAATCCGGCTCGAAGGAG------T...............	20	1	5.00	5	0	1	0	0	0	0	4	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCCGG................................	26	9	5.00	45	0	24	18	0	3	0	0	0	0	0
...............................................................................................TGGTTCAAATCCGGCTCGAAG.........................	21	9	4.22	38	0	21	3	0	4	0	10	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTC.............................	24	9	4.00	36	0	22	6	7	1	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGC...............................	24	9	3.89	35	1	13	14	1	3	0	0	0	1	2
.....................................................................................CATAGGTCGCTGGTTCAAATCCGGC...............................	25	9	3.78	34	0	21	10	3	0	0	0	0	0	0
.........................................GGTGGACTGTAGATC---..................................................................................	15	8	3.75	30	0	0	0	0	0	0	0	1	4	25
..................TTCGATAGCTCAGTTGGTAGAGC....................................................................................................	23	9	3.56	32	0	11	17	1	2	1	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATC...................................	20	9	3.33	30	0	9	8	5	5	1	2	0	0	0
.....................................GAGCGGTGGACTGTAGATC---..................................................................................	19	4	3.25	13	0	0	0	0	0	0	2	2	2	7
........................................................................................AGGTCGCTGGTTCAAATCCG.................................	20	9	3.11	28	0	16	5	0	7	0	0	0	0	0
.................................................................................................GTTCAAATCCGGCTCGAAGGA.......................	21	9	3.11	28	0	24	1	0	0	0	3	0	0	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGGCTC.............................	27	9	3.00	27	0	11	11	4	1	0	0	0	0	0
......................................................TA---GAAACACGTGCAA-----TAGAAA..........................................................	21	1	3.00	3	0	1	0	0	0	2	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATC...................................	18	9	2.89	26	0	12	7	3	4	0	0	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCGG................................	19	9	2.78	25	0	16	7	0	2	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG.........................	28	9	2.78	25	0	15	7	3	0	0	0	0	0	0
....................CGATAGCTCAGTTGGTAGAG.....................................................................................................	20	9	2.67	24	0	0	0	0	22	2	0	0	0	0
................................................................................................GGTTCAAATCCGGCTCGAAG.........................	20	9	2.67	24	0	14	4	0	2	0	4	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGC...............................	21	9	2.56	23	0	19	4	0	0	0	0	0	0	0
................CCTTCGATAGCTCAGTTGGAGA.......................................................................................................	22	9	2.56	23	0	0	0	0	0	0	12	0	0	11
.........................................................................................GGTCGCTGGTTCAAATCCG.................................	19	9	2.56	23	0	20	0	1	2	0	0	0	0	0
........................................CGGTGGACTGTAGATC---C.................................................................................	17	12	2.50	30	0	0	0	0	0	0	0	0	1	29
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAA..........................	26	9	2.44	22	0	20	1	1	0	0	0	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATC...................................	19	9	2.44	22	0	12	3	2	1	0	4	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCTC.............................	26	9	2.44	22	0	9	5	8	0	0	0	0	0	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGGCT..............................	26	9	2.44	22	0	16	5	0	1	0	0	0	0	0
..............................................................................................CTGGTTCAAATCCGGCTCGAAG.........................	22	9	2.44	22	0	16	5	0	1	0	0	0	0	0
.................CTTCGATAGCTCAGTTGGTAGA......................................................................................................	22	9	2.33	21	0	15	3	0	3	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCG.................................	22	9	2.33	21	0	15	4	0	2	0	0	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCGGCTCGAAG.........................	26	9	2.33	21	0	18	2	0	0	1	0	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCGGCTCG............................	23	9	2.22	20	0	20	0	0	0	0	0	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGGCT..............................	24	9	2.22	20	0	20	0	0	0	0	0	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCA.......................................	19	9	2.11	19	0	16	1	0	1	1	0	0	0	0
.................CTTCGATAGCTCAGTTGG..........................................................................................................	18	9	2.11	19	0	18	0	0	1	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGC...............................	22	9	2.11	19	0	8	7	2	1	0	0	0	1	0
..................................................................................................TTCAAATCCGGCTCGAAGG........................	19	9	2.11	19	0	17	0	0	1	0	1	0	0	0
...................TCGATAGCTCAGTTGGTAGA......................................................................................................	20	9	2.00	18	0	7	0	0	9	1	1	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCC..................................	24	9	2.00	18	0	9	9	0	0	0	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTT.........................................	18	9	2.00	18	0	14	1	0	2	1	0	0	0	0
..............AACCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	27	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...................................TAGAGCGGTGGACTGTAGATA---..................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	2	0
.......................................................................A-----TAGAAATCCATAGGTCGCTG............................................	21	1	2.00	2	0	0	1	0	1	0	0	0	0	0
...............................TTGGTAGAGCGGTGGACTGTAGATC---C.................................................................................	26	4	2.00	8	0	0	0	0	0	0	0	0	6	2
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCG............................	25	9	2.00	18	0	17	1	0	0	0	0	0	0	0
.....................................................ATA---GAAACACGTGCAA-----TAG.............................................................	19	1	2.00	2	0	1	0	0	0	0	0	0	1	0
..............................................................................AGAAATCCATAGGTCGCTG............................................	19	1	2.00	2	0	0	0	0	2	0	0	0	0	0
.........................................GGTGGACTGTAGATA---GAAAC.............................................................................	20	1	2.00	2	1	0	0	0	0	0	0	0	0	1
....................CGATAGCTCAGTTGGTAGAGC....................................................................................................	21	9	1.89	17	0	2	8	1	6	0	0	0	0	0
.............................AGTTGGTAGAGCGGTGGA..............................................................................................	18	9	1.89	17	0	7	0	0	1	1	1	0	2	5
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCT..............................	25	9	1.78	16	0	14	2	0	0	0	0	0	0	0
.............................AGTTGGTAGAGCGGTGGAC.............................................................................................	19	9	1.78	16	0	3	1	2	0	0	2	3	4	1
.....................GATAGCTCAGTTGGTAGAGC....................................................................................................	20	9	1.78	16	0	3	4	1	6	2	0	0	0	0
.....................................................................................CATAGGTCGCTGGTTCAAATC...................................	21	9	1.56	14	0	6	4	1	0	0	3	0	0	0
...............................TTGGTAGAGCGGTGGACTGTAGATC---..................................................................................	25	4	1.50	6	0	0	0	0	0	0	0	0	5	1
...................................TAGAGCGGTGGACTGTAGATC---..................................................................................	21	4	1.50	6	0	0	0	0	0	0	0	0	6	0
....................................AGAGCGGTGGACTGTAGATC---C.................................................................................	21	4	1.50	6	0	1	1	0	0	0	0	1	0	3
...................................................................................TCCATAGGTCGCTGGTTC........................................	18	9	1.44	13	0	12	1	0	0	0	0	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCCG.................................	25	9	1.44	13	0	11	1	0	1	0	0	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCGGCTC.............................	22	9	1.44	13	0	11	0	2	0	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAA..........................	27	9	1.44	13	0	12	1	0	0	0	0	0	0	0
............................CAGTTGGTAGAGCGGTGGACTGTA.........................................................................................	24	9	1.44	13	0	0	1	0	2	0	0	0	0	10
.............................AGTTGGTAGAGCGGTGGACTGTA.........................................................................................	23	9	1.33	12	0	0	0	0	0	0	0	3	4	5
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGGCT..............................	29	9	1.33	12	0	0	3	9	0	0	0	0	0	0
.................CTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	23	9	1.33	12	0	12	0	0	0	0	0	0	0	0
...............................TTGGTAGAGCGGTGGACTGTAG........................................................................................	22	9	1.33	12	0	2	0	0	0	0	0	5	4	1
..................................................................................ATCCATAGGTCGCTGGTTCAAATC...................................	24	9	1.33	12	0	8	3	0	0	0	1	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGA...........................	25	9	1.33	12	0	11	1	0	0	0	0	0	0	0
..............................GTTGGTAGAGCGGTGGAC.............................................................................................	18	9	1.33	12	0	7	0	0	2	0	0	1	0	2
...............................TTGGTAGAGCGGTGGAC.............................................................................................	17	9	1.33	12	0	0	0	0	0	0	0	3	1	8
....................................AGAGCGGTGGACTGTAGATC---..................................................................................	20	4	1.25	5	0	0	0	0	0	0	0	0	2	3
.....................................GAGCGGTGGACTGTAGATC---C.................................................................................	20	4	1.25	5	1	0	0	0	0	0	0	0	0	4
.................................GGTAGAGCGGTGGACTGTAGATC---C.................................................................................	24	4	1.25	5	0	0	0	0	0	0	0	0	5	0
................CCTTCGATAGCTCAGTTGGTAGAGCGG..................................................................................................	27	9	1.22	11	0	9	2	0	0	0	0	0	0	0
..............................................................................................CTGGTTCAAATCCGGCTCG............................	19	9	1.22	11	0	11	0	0	0	0	0	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCCGGCTC.............................	29	9	1.22	11	0	0	3	8	0	0	0	0	0	0
.......................TAGCTCAGTTGGTAGAGC....................................................................................................	18	9	1.22	11	0	10	0	0	0	0	1	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGGCTC.............................	25	9	1.22	11	0	4	3	3	1	0	0	0	0	0
...............................................................................................TGGTTCAAATCCGGCTCGAA..........................	20	9	1.22	11	0	11	0	0	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCTCGA...........................	28	9	1.22	11	0	3	8	0	0	0	0	0	0	0
...............................................................................................TGGTTCAAATCCGGCTCGAAGG........................	22	9	1.22	11	0	7	0	0	1	0	3	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGGC...............................	23	9	1.22	11	0	5	5	0	0	0	0	0	1	0

droPer2

ACT-GG--A-ATTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGATA---GAAACACGTGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAG------TTTT-TCTTTTTGTTG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.................................................................................................GTTCAAATCCGGCTCGAAG.........................	19	9	117.89	1061	141	295	101	0	8	516
................CCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	25	9	57.11	514	25	242	196	2	19	30
......................................................................................ATAGGTCGCTGGTTCAAATCCGG................................	23	9	46.44	418	11	166	226	0	0	15
.................................................................................................GTTCAAATCCGGCTCGAA..........................	18	9	44.00	396	10	107	46	1	6	226
................CCTTCGATAGCTCAGTTGGTAGA......................................................................................................	23	9	43.22	389	50	45	222	0	2	70
........................................................................................AGGTCGCTGGTTCAAATCCGG................................	21	9	37.11	334	2	197	132	0	0	3
.....................................................ATA---GAAACACGTGCAA-----TAGAA...........................................................	21	1	25.00	25	3	18	1	0	2	1
......................ATAGCTCAGTTGGTAGAGC....................................................................................................	19	9	19.78	178	0	3	2	1	172	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGG................................	24	9	18.78	169	0	155	14	0	0	0
................CCTTCGATAGCTCAGTTGGTAG.......................................................................................................	22	9	18.33	165	3	22	131	0	0	9
....................CGATAGCTCAGTTGGTAGA......................................................................................................	19	9	15.78	142	8	12	66	0	0	56
.........................................................................................GGTCGCTGGTTCAAATCCGG................................	20	9	15.67	141	0	72	67	0	0	2
................CCTTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	29	9	14.78	133	32	0	85	0	0	16
........................................................................................AGGTCGCTGGTTCAAATCC..................................	19	9	13.56	122	4	113	5	0	0	0
..................TTCGATAGCTCAGTTGGTAGA......................................................................................................	21	9	12.89	116	18	8	48	0	2	40
.......................................................................................TAGGTCGCTGGTTCAAATCCGG................................	22	9	12.44	112	1	44	62	0	1	4
................CCTTCGATAGCTCAGTTGG..........................................................................................................	19	9	12.33	111	3	29	40	10	14	15
.....................GATAGCTCAGTTGGTAGA......................................................................................................	18	9	12.22	110	5	8	86	0	1	10
................CCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	24	9	11.89	107	1	54	49	0	0	3
......................................................................................ATAGGTCGCTGGTTCAAATCC..................................	21	9	11.78	106	23	66	13	0	0	4
.....................................................................................CATAGGTCGCTGGTTCAAATCC..................................	22	9	11.33	102	46	42	9	0	0	5
................CCTTCGATAGCTCAGTTG...........................................................................................................	18	9	10.89	98	2	25	29	21	19	2
......................ATAGCTCAGTTGGTAGAGCGGTGGA..............................................................................................	25	9	7.78	70	0	20	5	0	7	38
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG................................	27	9	7.56	68	4	56	5	0	0	3
....................................................................................................CAAATCCGGCTCGAAGGAG------T...............	20	1	6.00	6	0	2	0	0	2	2
..................TTCGATAGCTCAGTTGGTAG.......................................................................................................	20	9	5.78	52	1	7	41	0	0	3
................CCTTCGATAGCTCAGTTGGT.........................................................................................................	20	9	5.56	50	2	11	36	0	1	0
.........................................................................................GGTCGCTGGTTCAAATCC..................................	18	9	5.44	49	2	40	7	0	0	0
......................ATAGCTCAGTTGGTAGAG.....................................................................................................	18	9	5.22	47	9	21	0	0	7	10
.....................................................ATA---GAAACACGTGCAA-----TAGAAA..........................................................	22	1	5.00	5	0	4	0	1	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	28	9	4.44	40	5	14	15	0	0	6
..................................................................................................TTCAAATCCGGCTCGAAG.........................	18	9	4.33	39	3	26	2	0	0	8
................CCTTCGATAGCTCAGTTGGTA........................................................................................................	21	9	4.11	37	4	13	17	1	1	1
............................................GGACTGTAGATA---GAAACACGTGC.......................................................................	23	1	4.00	4	0	0	2	0	0	2
......................................................................................ATAGGTCGCTGGTTCAAATC...................................	20	9	3.78	34	19	7	1	0	0	7
..................................................................................ATCCATAGGTCGCTGGTTCA.......................................	20	9	3.78	34	2	25	6	0	1	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG.........................	27	9	3.67	33	0	33	0	0	0	0
...............................................................................................TGGTTCAAATCCGGCTCGAAG.........................	21	9	3.44	31	0	14	7	0	0	10
.................................................................................................GTTCAAATCCGGCTCGAAGG........................	20	9	3.44	31	2	23	1	0	0	5
...................TCGATAGCTCAGTTGGTAGA......................................................................................................	20	9	3.44	31	5	0	10	0	0	16
.......................................................................................TAGGTCGCTGGTTCAAATCC..................................	20	9	3.22	29	12	14	3	0	0	0
........................................CGGTGGACTGTAGATA---GAAACACGTGC.......................................................................	27	1	3.00	3	3	0	0	0	0	0
.................................................................................................GTTCAAATCCGGCTCGAAGGAC------................	22	9	2.78	25	8	6	0	0	0	11
................CCTTCGATAGCTCAGTTGGTAGAGCGG..................................................................................................	27	9	2.33	21	2	19	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCG............................	24	9	2.33	21	0	21	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCT..............................	23	9	2.33	21	0	19	1	1	0	0
........................................................................................AGGTCGCTGGTTCAAATC...................................	18	9	2.22	20	0	13	4	0	3	0
.................CTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	24	9	2.11	19	0	19	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTC........................................	19	9	2.11	19	1	11	6	0	1	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCCGG................................	26	9	2.11	19	3	13	2	0	0	1
..................TTCGATAGCTCAGTTGGTAGAG.....................................................................................................	22	9	2.11	19	0	1	17	0	0	1
.....................................................ATA---GAAACACGTGCAA-----TAGA............................................................	20	1	2.00	2	0	1	0	0	1	0
....................................................................................................CAAATCCGGCTCGAAGGAG------TT..............	21	1	2.00	2	0	0	0	0	2	0
................CCTTCGATAGCTCAGTTGGTAGAGCGT..................................................................................................	27	9	2.00	18	0	17	0	0	0	1
......................................AGCGGTGGACTGTAGATC---C.................................................................................	19	4	2.00	8	5	2	0	0	0	1
........................................CGGTGGACTGTAGATA---GAAAC.............................................................................	21	1	2.00	2	2	0	0	0	0	0
.............................................GACTGTAGATA---GAAACACGT.........................................................................	20	1	2.00	2	0	1	1	0	0	0
.....................................GAGCGGTGGACTGTAGATA---GAAACAC...........................................................................	26	1	2.00	2	2	0	0	0	0	0
..............AACCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	26	1	2.00	2	0	2	0	0	0	0
.......................................................................A-----TAGAAATCCATAGGTCGCTG............................................	21	1	2.00	2	2	0	0	0	0	0
.............................................GACTGTAGATA---GAAACACGTGC.......................................................................	22	1	2.00	2	0	0	2	0	0	0
....................CGATAGCTCAGTTGGTAGAGC....................................................................................................	21	9	1.89	17	2	1	12	0	0	2
................CCTTCGATAGCTCAGTTGGAGA.......................................................................................................	22	9	1.89	17	0	9	0	0	0	8
........................................................................................AGGTCGCTGGTTCAAATCCG.................................	20	9	1.78	16	8	5	3	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCG.................................	22	9	1.78	16	4	8	2	0	0	2
.......................................GCGGTGGACTGTAGATC---C.................................................................................	18	8	1.75	14	13	0	0	0	0	1
....................CGATAGCTCAGTTGGTAGAG.....................................................................................................	20	9	1.67	15	0	1	14	0	0	0
..................................................................................................TTCAAATCCGGCTCGAAGGAC------................	21	9	1.67	15	11	1	0	0	0	3
.........................................................................................GGTCGCTGGTTCAAATCCGGCT..............................	22	9	1.67	15	0	13	1	0	1	0
......................ATAGCTCAGTTGGTAGAGCA...................................................................................................	20	9	1.56	14	0	2	0	0	12	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTC.............................	23	9	1.56	14	0	12	0	0	2	0
.................................................................................................GTTCAAATCCGGCTCGAAGGA.......................	21	9	1.44	13	0	10	1	0	0	2
.......................................................................................TAGGTCGCTGGTTCAAATC...................................	19	9	1.44	13	4	1	2	1	4	1
..............................GTTGGTAGAGCGGTGGAC.............................................................................................	18	9	1.33	12	4	2	1	0	0	5
..................TTCGATAGCTCAGTTGGTAGAGC....................................................................................................	23	9	1.33	12	4	4	4	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGC...............................	24	9	1.22	11	0	11	0	0	0	0
.................CTTCGATAGCTCAGTTGGTAGA......................................................................................................	22	9	1.11	10	4	1	4	0	0	1
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAA..........................	26	9	1.11	10	0	10	0	0	0	0
..................TTCGATAGCTCAGTTGGTA........................................................................................................	19	9	1.11	10	5	2	1	0	2	0
..................TTCGATAGCTCAGTTGGT.........................................................................................................	18	9	1.11	10	1	0	9	0	0	0
...................................................................................................TCAAATCCGGCTCGAAGGAC------................	20	9	1.11	10	5	1	0	0	0	4
.....................................................................................CATAGGTCGCTGGTTCAAATC...................................	21	9	1.11	10	6	1	0	0	0	3
.....................................................ATA---GAAACACGTGCAA-----TAGAAAA.........................................................	23	1	1.00	1	0	1	0	0	0	0
.....................................................ATA---GAAACACGTGCAA-----TAG.............................................................	19	1	1.00	1	0	0	0	0	0	1
.....................GATAGCTCAGTTGGTAGAGCGGTGGAC.............................................................................................	27	9	1.00	9	5	1	0	0	0	3
.........................................................................................GGTCGCTGGTTCAAATCCG.................................	19	9	1.00	9	0	7	2	0	0	0
......................................AGCGGTGGACTGTAGATA---G.................................................................................	19	1	1.00	1	0	1	0	0	0	0
....................................................GATA---GAAACACGTGCAA-----T...............................................................	18	1	1.00	1	0	0	1	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCG............................	25	9	1.00	9	0	9	0	0	0	0
.....................................................ATA---GAAACACGTGCAA-----TAGAAAAA........................................................	24	1	1.00	1	0	1	0	0	0	0
...................TCGATAGCTCAGTTGGTAG.......................................................................................................	19	9	1.00	9	0	2	7	0	0	0
.............................................................................................................CTCGAAGGAG------TTTT-TCTTT......	19	1	1.00	1	0	0	0	1	0	0
...............................................................................................TGGTTCAAATCCGGCTCGAA..........................	20	9	1.00	9	0	3	2	0	1	3
............................................GGACTGTAGATA---GAAACAC...........................................................................	19	1	1.00	1	0	0	1	0	0	0
..........................................................................................................CGGCTCGAAGGAG------TTTT-TCTTT......	22	1	1.00	1	0	0	0	0	0	1
................................................TGTAGATA---GAAACACGTGC.......................................................................	19	1	1.00	1	0	0	0	0	0	1
.....................................................................................CATAGGTCGCTGGTTCATCC....................................	20	16	0.94	15	11	4	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAA..........................	27	9	0.89	8	0	8	0	0	0	0
.....................GATAGCTCAGTTGGTAGAGC....................................................................................................	20	9	0.89	8	0	1	6	0	1	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGGCT..............................	26	9	0.89	8	0	7	0	0	0	1
..................................................................................ATCCATAGGTCGCTGGTTCAAATCC..................................	25	9	0.89	8	0	8	0	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCGG................................	19	9	0.89	8	1	6	1	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCG.................................	18	9	0.89	8	8	0	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCG.................................	26	9	0.89	8	1	7	0	0	0	0
..............................GTTGGTAGAGCGGTGGACT............................................................................................	19	9	0.89	8	7	0	1	0	0	0
....................................................................................................CAAATCCGGCTCGAAGGAC------................	19	16	0.88	14	9	2	1	0	0	2
..............................................................................................CTGGTTCAAATCCGGCTCGAAG.........................	22	9	0.78	7	0	7	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGC...............................	22	9	0.78	7	0	5	2	0	0	0
.................CTTCGATAGCTCAGTTGGTAG.......................................................................................................	21	9	0.78	7	0	4	3	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCGGCTCGAAG.........................	26	9	0.78	7	0	7	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAAT....................................	19	9	0.78	7	1	4	0	0	0	2
.....................................GAGCGGTGGACTGTAGATC---..................................................................................	19	4	0.75	3	0	0	0	0	0	3
.....................................GAGCGGTGGACTGTAGATC---C.................................................................................	20	4	0.75	3	0	1	0	0	0	2
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCT..............................	25	9	0.67	6	0	5	1	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCGGCTC.............................	22	9	0.67	6	0	6	0	0	0	0
................CCTTCGATAGCTCAGTTGGTAGG......................................................................................................	23	9	0.67	6	6	0	0	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGGCT..............................	24	9	0.67	6	0	5	1	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTC.............................	24	9	0.67	6	0	4	1	0	1	0
.................CTTCGATAGCTCAGTTGG..........................................................................................................	18	9	0.67	6	0	6	0	0	0	0
.....................GATAGCTCAGTTGGTAGAG.....................................................................................................	19	9	0.67	6	3	0	1	0	0	2
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCTCG............................	27	9	0.67	6	0	6	0	0	0	0
................CCTTCGATAGCTCAGTTGGAG........................................................................................................	21	9	0.67	6	0	6	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCTC.............................	26	9	0.67	6	0	3	3	0	0	0
....................CGATAGCTCAGTTGGTAGAGCGGTGGACT............................................................................................	29	9	0.56	5	5	0	0	0	0	0

droWil2

A-----------TCACCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG---GTGTAATATGCAA-----TAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------TTTT-TTAA-A-ATTT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
................CCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	25	9	812.78	7315	20	633	1866	4605	191
.................................................................................................GTTCAAATCCGGCTCGAAG.........................	19	8	789.63	6317	83	967	4163	1065	39
.................................................................................................GTTCAAATCCGGCTCGAA..........................	18	9	375.22	3377	7	444	1861	983	82
................CCTTCGATAGCTCAGTTGGTAGA......................................................................................................	23	9	273.89	2465	6	240	951	1167	101
..................TTCGATAGCTCAGTTGGTAGA......................................................................................................	21	9	247.22	2225	10	43	652	1435	85
................CCTTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	29	9	168.89	1520	5	0	1300	214	1
....................CGATAGCTCAGTTGGTAGA......................................................................................................	19	9	150.44	1354	2	17	201	1071	63
................CCTTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	28	9	128.56	1157	2	161	626	359	9
......................................................................................ATAGGTCGCTGGTTCAAATCC..................................	21	9	108.78	979	56	220	121	418	164
..................TTCGATAGCTCAGTTGGTAG.......................................................................................................	20	9	101.44	913	1	43	46	740	83
.....................GATAGCTCAGTTGGTAGA......................................................................................................	18	9	100.78	907	0	13	13	798	83
.....................................................................................CATAGGTCGCTGGTTCAAATCC..................................	22	9	91.56	824	87	177	58	413	89
................CCTTCGATAGCTCAGTTGGTAG.......................................................................................................	22	9	84.89	764	1	115	69	414	165
................CCTTCGATAGCTCAGTTGG..........................................................................................................	19	9	69.56	626	2	118	12	393	101
................CCTTCGATAGCTCAGTTG...........................................................................................................	18	9	65.22	587	1	59	1	484	42
......................ATAGCTCAGTTGGTAGAGC....................................................................................................	19	9	58.89	530	1	50	13	449	17
....................CGATAGCTCAGTTGGTAGAGC....................................................................................................	21	9	57.11	514	3	12	73	420	6
..................TTCGATAGCTCAGTTGGTAGAG.....................................................................................................	22	9	56.67	510	0	5	50	445	10
..................TTCGATAGCTCAGTTGGTAGAGC....................................................................................................	23	9	51.22	461	1	48	138	265	9
......................................................................................ATAGGTCGCTGGTTCAAATCCGG................................	23	9	51.00	459	0	126	29	260	44
................CCTTCGATAGCTCAGTTGGAGA.......................................................................................................	22	10	44.30	443	0	39	231	135	38
....................CGATAGCTCAGTTGGTAG.......................................................................................................	18	9	42.00	378	0	5	0	366	7
......................ATAGCTCAGTTGGTAGAG.....................................................................................................	18	9	39.11	352	20	96	4	206	26
.......................................................................................TAGGTCGCTGGTTCAAATC...................................	19	9	35.78	322	26	65	10	24	197
.....................GATAGCTCAGTTGGTAGAGC....................................................................................................	20	9	33.56	302	0	7	53	237	5
......................................................................................ATAGGTCGCTGGTTCAAATC...................................	20	9	32.78	295	37	62	19	35	142
................................................................................................GGTTCAAATCCGGCTCGAAG.........................	20	8	32.75	262	1	34	138	79	10
.....................................................TTG---GTGTAATATGCAA-----TAGAA...........................................................	21	1	32.00	32	0	3	0	28	1
...............................................................................................TGGTTCAAATCCGGCTCGAAG.........................	21	8	31.63	253	0	42	108	93	10
...................TCGATAGCTCAGTTGGTAGA......................................................................................................	20	9	28.22	254	1	12	68	132	41
................CCTTCGATAGCTCAGTTGGTAGAGCGTG.................................................................................................	28	9	26.22	236	0	0	71	162	3
.......................................................................................TAGGTCGCTGGTTCAAATCC..................................	20	9	25.56	230	7	56	31	108	28
........................................................................................AGGTCGCTGGTTCAAATCCGG................................	21	9	25.33	228	0	63	15	144	6
................CCTTCGATAGCTCAGTTGGTA........................................................................................................	21	9	24.44	220	1	92	19	97	11
.....................GATAGCTCAGTTGGTAGAG.....................................................................................................	19	9	22.44	202	0	2	9	177	14
................CCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	24	9	21.56	194	0	26	44	121	3
.............................................GACTGTAGTTG---GTGTAATATGC.......................................................................	22	1	21.00	21	0	0	2	19	0
....................CGATAGCTCAGTTGGTAGAG.....................................................................................................	20	9	19.56	176	0	1	12	160	3
.................................................................................................GTTCAAATCCGGCTCGAAGG........................	20	8	19.13	153	0	64	73	13	3
................CCTTCGATAGCTCAGTTGGTAGAGCGT..................................................................................................	27	9	18.00	162	0	82	40	40	0
.................CTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	24	9	17.56	158	0	82	13	58	5
.....................................................TTG---GTGTAATATGCAA-----TAGA............................................................	20	1	17.00	17	0	0	1	14	2
.........................................................................................GGTCGCTGGTTCAAATCC..................................	18	9	16.33	147	3	65	3	71	5
.........................................................................................GGTCGCTGGTTCAAATCCGG................................	20	9	15.89	143	0	31	8	101	3
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG................................	27	9	15.67	141	0	52	5	80	4
................CCTTCGATAGCTCAGTTGGT.........................................................................................................	20	9	15.44	139	0	9	15	114	1
.....................................................................................CATAGGTCGCTGGTTCAAATCCGG................................	24	9	14.44	130	0	100	1	26	3
..................................................................................................TTCAAATCCGGCTCGAAG.........................	18	10	13.70	137	1	83	20	30	3
.......................................................................................TAGGTCGCTGGTTCAAATCCGG................................	22	9	13.22	119	0	24	13	80	2
.................................................................................................GTTCAAATCCGGCTCGAAGGA.......................	21	8	13.13	105	0	57	42	2	4
.............................................GACTGTAGTTG---GTGTAATATGCA......................................................................	23	1	13.00	13	0	0	0	13	0
...............................................................................................TGGTTCAAATCCGGCTCGAA..........................	20	9	12.78	115	0	27	65	13	10
......................................................................................ATAGGTCGCTGGTTCAAAT....................................	19	9	12.22	110	1	50	8	11	40
......................................................................................ATAGGTCGCTGGTTCAAATCCG.................................	22	9	11.00	99	1	13	9	53	23
................................................................................................GGTTCAAATCCGGCTCGAA..........................	19	9	10.33	93	0	27	35	29	2
...................TCGATAGCTCAGTTGGTAG.......................................................................................................	19	9	9.89	89	0	18	1	43	27
........................................................................................AGGTCGCTGGTTCAAATCC..................................	19	9	9.44	85	2	59	8	16	0
.....................................................................................CATAGGTCGCTGGTTCAAATC...................................	21	9	8.44	76	7	22	8	16	23
..................................................................................ATCCATAGGTCGCTGGTTCA.......................................	20	11	8.27	91	1	71	1	15	3
..................TTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	27	9	7.78	70	0	4	34	29	3
..................................................................................ATCCATAGGTCGCTGGTTCAAATCC..................................	25	9	7.33	66	0	58	1	7	0
........................................................................................AGGTCGCTGGTTCAAATC...................................	18	9	7.00	63	2	24	0	15	22
..................................................................................ATCCATAGGTCGCTGGTTC........................................	19	11	6.55	72	8	31	1	31	1
..................TTCGATAGCTCAGTTGGTA........................................................................................................	19	9	6.44	58	0	15	5	34	4
.....................................................................................CATAGGTCGCTGGTTCAAATCCGGCT..............................	26	9	6.33	57	0	6	3	45	3
................CCTTCGATAGCTCAGTTGGAG........................................................................................................	21	9	6.33	57	0	53	0	3	1
.................CTTCGATAGCTCAGTTGGTAGA......................................................................................................	22	9	6.00	54	1	24	11	14	4
................CCTTCGATAGCTCAGTTGGTAGAGCGG..................................................................................................	27	9	5.56	50	0	27	16	6	1
...................TCGATAGCTCAGTTGGTAGAGC....................................................................................................	22	9	5.00	45	0	3	14	27	1
...................................................................................TCCATAGGTCGCTGGTTCAAATCCGG................................	26	9	4.67	42	0	20	2	20	0
..................TTCGATAGCTCAGTTGGT.........................................................................................................	18	9	4.44	40	0	0	0	40	0
..................................................................................ATCCATAGGTCGCTGGTT.........................................	18	11	4.27	47	0	16	0	29	2
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG.........................	27	8	4.13	33	0	29	0	4	0
........................................................................................AGGTCGCTGGTTCAAATCCG.................................	20	9	4.11	37	1	7	2	23	4
.....................................................................................CATAGGTCGCTGGTTCAAAT....................................	20	9	4.11	37	2	17	1	5	12
..........................................................................................GTCGCTGGTTCAAATCCGG................................	19	9	4.11	37	3	7	0	26	1
..................................................................................ATCCATAGGTCGCTGGTTCAAATC...................................	24	9	4.11	37	2	31	0	1	3
................CCTTCGATAGCTCAGTTGGTAGG......................................................................................................	23	9	4.11	37	3	6	2	2	24
.....................................................TTG---GTGTAATATGCAA-----TAG.............................................................	19	1	4.00	4	0	0	0	4	0
...............................................CTGTAGTTG---GTGTAATATGC.......................................................................	20	1	4.00	4	0	0	0	4	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCT..............................	23	9	3.89	35	1	11	0	19	4
......................................................................................ATAGGTCGCTGGTTCAAATCCGGC...............................	24	9	3.89	35	0	19	2	12	2
.....................................................................................CATAGGTCGCTGGTTCAAATCCG.................................	23	9	3.78	34	0	6	4	24	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCT..............................	25	9	3.78	34	0	4	1	25	4
.................CTTCGATAGCTCAGTTGGTAG.......................................................................................................	21	9	3.67	33	0	21	1	9	2
...................TCGATAGCTCAGTTGGTAGAG.....................................................................................................	21	9	3.22	29	2	1	4	16	6
....................................................................................................CAAATCCGGCTCGAAGGAT------T...............	20	6	3.17	19	10	5	1	3	0
.......................................................................................TAGGTCGCTGGTTCAAAT....................................	18	9	3.11	28	2	8	0	4	14
...............................................................................................TGGTTCAAATCCGGCTCGA...........................	19	9	3.11	28	0	7	21	0	0
.................CTTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	27	9	3.11	28	0	20	5	2	1
....................CGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	25	9	3.11	28	0	0	8	20	0
...............................................................................................TGGTTCAAATCCGGCTCGAAGGA.......................	23	8	3.00	24	0	10	4	4	6
.......................................................................................TAGGTCGCTGGTTCAAATCCG.................................	21	9	3.00	27	1	7	1	10	8
................................................TGTAGTTG---GTGTAATATGC.......................................................................	19	1	3.00	3	0	0	0	3	0
................................................TGTAGTTG---GTGTAATATGCA......................................................................	20	1	3.00	3	0	0	0	3	0
.............................................GACTGTAGTTG---GTGTAATATGCAA-----................................................................	24	1	3.00	3	0	0	0	3	0
.....................GATAGCTCAGTTGGTAGAGCGGTG................................................................................................	24	9	3.00	27	0	0	9	18	0
................CCTTCGATAGCTCAGTTGT..........................................................................................................	19	9	2.78	25	0	15	0	10	0
..............................................................................................CTGGTTCAAATCCGGCTCGAA..........................	21	9	2.67	24	0	8	14	2	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGGCTC.............................	27	9	2.67	24	1	7	2	14	0
...........................TCAGTTGGTAGAGCGGTG................................................................................................	18	9	2.56	23	0	4	2	17	0
..............................GTTGGTAGAGCGGTGGAC.............................................................................................	18	9	2.44	22	5	0	3	7	7
.........................................................................................GGTCGCTGGTTCAAATCCG.................................	19	9	2.22	20	2	3	2	12	1
................CCTTCGATAGCTCAGTTGGA.........................................................................................................	20	9	2.22	20	0	6	9	0	5
......................................................................................ATAGGTCGCTGGTTCAAA.....................................	18	9	2.11	19	0	7	4	4	4
...............................................................................................TGGTTCAAATCCGGCTCG............................	18	9	2.11	19	0	15	1	3	0
.............................................GACTGTAGTTG---GTGTAATATG........................................................................	21	1	2.00	2	0	0	0	2	0
.............................................GACTGTAGTTG---GTGTAATATGCAA-----T...............................................................	25	1	2.00	2	0	0	0	2	0
.....................................................TTG---GTGTAATATGCAA-----TAGAAA..........................................................	22	1	2.00	2	0	0	0	2	0
.....................................................TTG---GTGTAATATGCAA-----TA..............................................................	18	1	2.00	2	0	0	0	2	0
.......................................................................A-----TAGAAATCCATAGGTCGCTG............................................	21	2	2.00	4	0	0	0	4	0
............................................GGACTGTAGTTG---GTGTAATATGCA......................................................................	24	1	2.00	2	0	0	0	2	0
....................................................................................................CAAATCCGGCTCGAAGGAT------................	19	7	2.00	14	9	4	0	1	0
.............................AGTTGGTAGAGCGGTGGA..............................................................................................	18	9	2.00	18	0	1	10	6	1
.............................................................................TAGAAATCCATAGGTCGCTG............................................	20	2	2.00	4	0	1	0	3	0
....................................................GTTG---GTGTAATATGCAA-----TAGA............................................................	21	1	2.00	2	0	0	0	2	0
.............................................GACTGTAGTTG---GTGTAAT...........................................................................	18	1	2.00	2	0	0	0	2	0
............................CAGTTGGTAGAGCGGTGGA..............................................................................................	19	9	2.00	18	0	2	9	7	0
...............CCCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	26	1	2.00	2	0	2	0	0	0

droVir3

ACACAA--CACATCGACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAGT---GATA----TACAAAT-TGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCTCAGTTTTT-TG-----GTTT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
................CCTTCGATAGCTCAGTTG...........................................................................................................	18	10	3456.00	34560	0	1	8	0	334	520	543	99	48	448	10	1	7	2	18	16	12	47	13	13	8120	20	73	570	632	352	600	320	5208	4600	1790	4658	301	758	276	661	489	234	1212	1515	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	12	13	2	0
................CCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	25	10	810.40	8104	6	20	820	1194	38	68	54	328	53	38	4	36	151	204	94	57	79	81	33	42	263	18	92	75	47	55	148	107	23	80	22	77	307	112	324	531	98	173	198	79	0	0	2	0	1	4	4	1	1	3	10	19	13	24	27	4	4	16	36	760	149	787	10
................CCTTCGATAGCTCAGTTGGTAGA......................................................................................................	23	10	328.50	3285	1	6	197	187	7	61	10	88	6	53	2	169	219	397	14	9	30	9	3	1	29	2	8	12	6	4	5	1	10	79	42	143	149	138	271	222	68	127	11	45	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	6	9	2	4	313	13	93	3
.................................................................................................GTTCAAATCCGGCTCGAAG.........................	19	7	205.43	1438	0	8	482	43	1	37	1	77	2	23	0	10	3	11	0	1	0	1	0	0	11	0	3	0	0	2	1	0	3	34	10	49	23	68	105	25	19	30	9	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	27	14	297	0
.................................................................................................GTTCAAATCCGGCTCGAA..........................	18	7	176.43	1235	2	0	203	27	0	62	3	85	16	93	2	16	11	25	6	3	7	3	0	1	12	0	11	3	3	0	1	0	2	38	11	38	31	117	122	32	27	42	15	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	10	122	0
................CCTTCGATAGCTCAGTTGG..........................................................................................................	19	10	145.20	1452	1	0	91	2	39	9	39	5	1	6	1	1	7	6	17	6	4	6	4	3	49	4	13	105	54	39	70	79	80	90	54	107	30	24	49	98	48	84	28	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	11	24	9	18
....................CGATAGCTCAGTTGGTAGA......................................................................................................	19	10	70.70	707	0	0	23	6	1	37	0	37	2	43	0	15	8	59	2	2	5	2	0	1	3	0	0	0	0	0	1	0	0	15	8	31	22	35	123	34	16	7	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	116	0	42	0
................CCTTCGATAGCTCAGTTGGTA........................................................................................................	21	10	66.60	666	0	1	52	8	5	7	17	9	3	2	0	4	6	8	10	6	4	10	1	1	51	2	4	9	10	3	14	8	27	22	7	32	45	30	49	62	9	37	34	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	20	7	0
................CCTTCGATAGCTCAGTTGGT.........................................................................................................	20	10	60.80	608	0	0	18	13	4	27	8	1	1	7	0	6	1	6	6	7	7	10	4	1	15	3	6	7	7	8	15	19	7	19	10	30	9	44	25	12	10	11	5	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	36	3	10	151
................CCTTCGATAGCTCAGTTGGTAG.......................................................................................................	22	10	55.40	554	0	0	39	6	4	5	6	23	3	3	2	13	25	45	4	3	10	4	0	1	4	0	3	3	1	4	17	8	10	10	4	12	10	7	34	35	10	25	11	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	125	12	7	1
.....................................................AGT---GATA----TACAAAT-TGTAGAC...........................................................	21	1	55.00	55	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	2	8	2	11	5	2	0	1	1	5	0	7	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCC..................................	21	8	52.88	423	7	15	159	24	0	0	1	14	2	3	0	3	5	9	6	0	4	0	0	0	4	1	1	3	2	1	4	1	1	7	2	4	25	6	19	28	3	27	13	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	9	5	0
..................TTCGATAGCTCAGTTGGTAGA......................................................................................................	21	10	47.30	473	2	1	26	36	0	5	4	13	1	4	0	8	5	32	3	5	1	0	1	1	14	0	1	4	3	1	3	3	0	9	2	6	10	12	11	10	6	7	6	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	170	8	28	0
...................TCGATAGCTCAGTTGGTAGA......................................................................................................	20	10	32.10	321	0	0	24	2	0	8	1	23	3	2	0	11	8	34	2	1	3	0	0	1	17	0	3	3	0	1	0	0	3	6	2	5	17	8	23	32	1	8	12	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	15	12	0
................CCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	24	10	30.80	308	0	0	45	18	3	4	1	8	4	1	1	28	25	36	6	1	4	3	0	0	3	0	0	0	2	2	5	4	0	3	1	5	9	5	7	19	6	5	4	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	1	6	0
..................................................................................ATCCATAGGTCGCTG............................................	15	8	29.00	232	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	12	0	1	0	0	0	0	0	0	1	0	0	0	35	23	87	71	0	0	0	0
.....................................................................................CATAGGTCGCTGGTTCAAATCC..................................	22	8	28.63	229	6	6	56	27	0	1	0	1	0	5	0	1	2	2	4	2	4	2	3	2	4	2	1	0	1	2	0	0	1	7	1	3	21	7	23	4	6	6	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	9	0
...................TCGATAGCTCAGTTGGTAGAGC....................................................................................................	22	10	26.70	267	1	0	33	11	0	0	0	60	10	1	0	1	6	17	1	0	0	1	1	0	17	0	1	1	1	0	2	0	1	1	0	1	15	3	13	42	0	9	5	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	2	6	0
.............................AGTTGGTAGAGCGGTGGAC.............................................................................................	19	7	26.43	185	7	3	8	2	1	0	10	12	35	18	25	0	0	0	1	0	1	2	0	0	1	0	0	0	0	4	17	17	1	2	0	1	0	0	0	1	0	0	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	8	1
......................................................................................ATAGGTCGCTGGTTCAAATCCGG................................	23	7	23.86	167	0	0	67	31	0	0	0	11	0	0	0	0	0	2	1	1	0	0	0	0	0	0	1	0	2	0	1	1	0	0	0	2	4	2	7	13	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	10	0	7	0
......................................................................................ATAGGTCGCTGGTTCAAAT....................................	19	8	23.13	185	0	1	29	0	0	4	1	12	1	0	0	2	2	1	0	0	0	1	2	1	21	0	1	4	0	1	1	0	2	3	5	5	15	3	7	16	0	13	12	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	2	7
.....................GATAGCTCAGTTGGTAGA......................................................................................................	18	10	22.50	225	0	0	17	2	0	4	0	5	1	7	0	3	5	13	0	0	8	3	0	1	4	0	0	1	0	0	1	0	1	6	1	4	11	14	39	15	4	4	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	48	1	0	0
..................TTCGATAGCTCAGTTGGTAGAGC....................................................................................................	23	10	21.50	215	0	0	35	92	1	0	0	14	2	1	1	2	2	5	1	1	0	1	0	0	3	0	0	0	1	0	0	0	0	0	0	0	2	0	4	6	0	4	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	29	0	4	0
..................TTCGATAGCTCAGTTGGTAG.......................................................................................................	20	10	19.80	198	0	0	6	8	0	0	0	10	3	0	0	2	0	9	2	1	2	0	0	0	4	0	0	1	1	0	1	1	3	0	0	3	2	1	8	5	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	116	1	5	0
........................................................................................AGGTCGCTGGTTCAAATCCGG................................	21	7	19.57	137	0	0	18	83	0	0	0	0	0	0	1	0	0	0	1	3	1	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	0	0	0
......................ATAGCTCAGTTGGTAGAG.....................................................................................................	18	10	17.10	171	0	17	25	3	0	1	0	8	2	4	1	6	10	20	0	0	1	1	0	0	0	1	0	0	0	0	0	0	2	0	1	1	20	6	9	3	3	4	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	8	2	2	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGG................................	24	7	16.71	117	0	0	82	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	2	0	1	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	29	7	16.57	116	0	0	0	26	0	0	0	0	0	0	1	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	3	1	0	2	0	2	0	0	3	3	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	0	41	0
..................................................................................ATCCATAGGTCGCTGGTTC........................................	19	8	16.00	128	1	2	35	4	0	1	0	0	0	0	0	0	0	0	0	6	3	3	4	2	0	1	0	0	0	0	1	1	1	5	1	8	8	2	13	7	3	5	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...........................................................................................TCGCTGGTTCAAATCCGGCTCGAAGG........................	26	7	15.71	110	0	0	1	0	5	6	9	1	1	3	1	0	0	0	0	0	0	0	0	0	12	0	0	5	3	3	0	2	6	3	2	2	1	11	2	0	2	0	15	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
.....................................................AGT---GATA----TACAAAT-TGTAGA............................................................	20	1	15.00	15	1	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	1	0	1	1	0	0	2	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................TTCGATAGCTCAGTTGGTAGAG.....................................................................................................	22	10	14.90	149	1	0	5	7	0	1	2	17	6	4	2	3	0	8	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	0	3	1	1	2	2	1	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	64	1	8	0
..................................................................................ATCCATAGGTCGCTGGTTCA.......................................	20	8	14.25	114	4	1	26	4	0	1	0	0	0	0	0	0	0	0	6	5	1	10	3	0	0	1	1	1	2	0	2	5	11	6	2	2	1	1	2	1	1	5	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	0
.................CTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	24	10	13.70	137	0	0	86	23	0	1	0	0	0	0	0	0	1	1	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	2	3	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	6	2
...................TCGATAGCTCAGTTGGTAG.......................................................................................................	19	10	13.60	136	0	0	4	0	0	0	1	53	3	0	0	0	4	8	2	0	1	0	0	0	10	0	0	0	1	0	0	2	1	2	0	2	8	0	5	10	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	5	0	0
....................CGATAGCTCAGTTGGTAGAGC....................................................................................................	21	10	12.60	126	0	0	14	17	0	4	0	5	3	5	0	1	0	1	0	1	1	2	0	0	4	2	1	1	0	0	1	0	0	1	0	4	1	6	13	9	2	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	1	3	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG................................	27	7	12.43	87	0	0	33	32	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	1	0	5	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	28	7	12.29	86	0	0	24	2	0	1	0	3	1	0	1	0	2	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	2	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	29	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCT..............................	25	7	11.86	83	0	0	45	2	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	1	0	0	0	1	0	0	0	0	6	0	6	12	1	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCG.................................	22	7	11.57	81	0	3	18	1	0	0	0	13	4	2	0	0	1	0	0	0	1	0	0	0	1	1	1	0	1	0	0	0	0	0	0	0	3	3	5	8	0	6	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0
......................ATAGCTCAGTTGGTAGAGC....................................................................................................	19	10	10.90	109	0	1	21	16	0	0	0	5	2	4	2	0	0	0	0	0	1	1	0	0	3	0	1	0	0	0	0	0	0	0	0	1	1	1	2	0	0	0	2	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	7	1	0
......................................................................................ATAGGTCGCTGGTTCAAATC...................................	20	8	10.75	86	4	10	9	4	0	0	0	10	0	1	0	1	1	0	0	1	1	0	0	0	3	1	1	0	1	0	0	0	2	2	0	2	8	1	2	2	2	4	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	1	0
.................................................................................................GTTCAAATCCGGCTCGAAGG........................	20	7	9.57	67	0	0	30	3	0	3	0	3	0	1	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	13	0
.........................................................................................GGTCGCTGGTTCAAATCCGG................................	20	7	9.57	67	0	0	26	20	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	0	0	0
.........................GCTCAGTTGGTAGAGCGGTGG...............................................................................................	21	7	9.57	67	0	0	3	0	0	0	1	3	4	13	13	0	0	0	1	0	0	0	0	0	2	0	2	0	0	0	0	4	0	3	2	4	0	3	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	0
..............................GTTGGTAGAGCGGTGGAC.............................................................................................	18	7	9.43	66	4	0	2	0	2	4	5	1	12	2	9	0	0	0	0	0	1	1	0	0	7	0	0	4	0	1	1	2	0	0	1	0	0	1	1	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
...........................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGAC......................	28	7	8.86	62	2	0	0	2	0	2	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	1	6	1	1	1	1	1	0	0	2	3	2	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	27
...................................................................................TCCATAGGTCGCTGGTTCA.......................................	19	8	8.38	67	0	0	9	0	0	0	0	1	1	0	0	0	0	0	1	0	0	1	0	0	1	0	0	2	10	7	2	4	5	3	3	9	0	3	1	0	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGG................................	22	7	8.14	57	0	0	20	27	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	1	0	0
.................................................................................................GTTCAAATCCGGCTCGAAGGA.......................	21	7	8.14	57	1	1	24	2	0	2	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	3	0	2	2	3	1	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	6	0
.................................................................................................GTTCAAATCCGGCTCGAAGGAC......................	22	8	7.75	62	5	36	4	4	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	2	0	3	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
...................TCGATAGCTCAGTTGGTAGAG.....................................................................................................	21	10	7.70	77	0	0	3	0	0	1	0	25	1	2	3	0	4	8	1	0	0	0	1	0	3	0	0	1	0	0	0	0	0	2	0	0	2	2	0	3	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	6	1	0
...............................................................................................TGGTTCAAATCCGGCTCGAAG.........................	21	7	7.57	53	0	0	10	3	0	1	0	2	0	4	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	1	0	3	2	5	6	4	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGGCT..............................	26	7	7.43	52	0	0	27	3	0	2	0	0	0	0	0	0	0	0	0	0	1	1	2	2	0	2	1	0	0	0	0	0	0	2	0	0	3	1	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
......................ATAGCTCAGTTGGTAGAGCGGTGGA..............................................................................................	25	7	7.29	51	0	0	0	0	6	5	11	0	2	2	0	0	0	0	0	0	0	0	0	0	4	0	0	2	0	0	0	0	1	1	0	0	0	0	1	0	0	0	10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	3	0	1	0
....................CGATAGCTCAGTTGGTAG.......................................................................................................	18	10	6.70	67	0	0	2	1	0	0	0	8	1	2	0	1	0	4	2	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	2	1	3	7	3	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	1	0	0
...............................................................................................TGGTTCAAATCCGGCTCGAA..........................	20	7	6.57	46	0	0	8	4	0	3	0	2	1	3	0	0	0	0	0	0	0	1	1	2	1	0	0	0	1	0	1	0	2	1	0	0	2	4	2	2	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1
.....................GATAGCTCAGTTGGTAGAGC....................................................................................................	20	10	6.50	65	0	0	8	6	0	0	0	9	3	3	1	0	0	2	0	1	2	2	0	0	1	1	0	1	0	0	0	0	0	1	0	0	2	3	4	2	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	1	2	0
...................................................................................TCCATAGGTCGCTGGTTC........................................	18	8	6.50	52	0	0	7	3	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	2	4	4	1	4	1	5	1	4	1	3	1	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	1
..................................................................................................TTCAAATCCGGCTCGAAG.........................	18	7	6.43	45	0	0	35	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
.............................AGTTGGTAGAGCGGTGGA..............................................................................................	18	7	6.14	43	0	0	0	0	0	0	1	1	10	4	5	0	0	0	0	0	0	1	0	0	0	0	0	0	2	1	2	6	1	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	0
....................CGATAGCTCAGTTGGTAGAG.....................................................................................................	20	10	6.00	60	0	0	2	2	0	2	0	5	0	0	0	1	1	10	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	6	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCC..................................	20	8	5.50	44	3	2	13	10	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	2	1	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	2	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATCC..................................	25	8	5.50	44	0	0	25	13	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0
..................TTCGATAGCTCAGTTGGTA........................................................................................................	19	10	5.30	53	0	0	13	3	0	2	0	0	0	0	0	0	0	0	4	1	0	1	0	0	2	0	0	0	0	0	0	0	2	4	0	1	1	0	4	4	0	3	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGTGGACT............................................................................................	33	7	5.29	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	1	1	1	0	4	5	4	4	2	12	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTC.............................	23	7	5.00	35	0	0	13	6	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14
............................................................................................................GCTCGAAGGATCTCAGTTTTT-T..........	22	1	5.00	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG.........................	27	7	4.86	34	0	0	29	2	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................GTCGCTGGTTCAAATCCGG................................	19	7	4.71	33	0	0	9	10	0	1	0	0	1	0	1	0	0	0	0	1	0	0	0	1	0	0	2	0	1	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0
...................TCGATAGCTCAGTTGGTA........................................................................................................	18	10	4.70	47	0	0	2	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	1	0	0	2	3	0	1	10	0	4	10	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0
...........ATCGACCTTCGATAGCTCAGT.............................................................................................................	21	2	4.50	9	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................CCTTCGATAGCTCAGTTGGTAGAGCGGTGGAC.............................................................................................	32	7	4.43	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	2	0	0	3	1	1	3	6	6	0	7	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCG............................	24	7	4.29	30	1	0	12	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	2	0	1	4	0	0	0	2	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................CTTCGATAGCTCAGTTGGTAGA......................................................................................................	22	10	4.10	41	0	0	20	2	0	0	0	0	0	1	0	0	2	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	2	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0
..............................................................................................................TCGAAGGATCTCAGTTTTT-T..........	20	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
........................................................................................................TCCGGCTCGAAGGATCTCAGTTTTT-T..........	26	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1
...........................................................................................TCGCTGGTTCAAATCCGGCTCGAAG.........................	25	7	3.86	27	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	1	7	1	4	0	1	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
........................................................................................AGGTCGCTGGTTCAAATCCGGCTC.............................	24	7	3.86	27	0	0	7	17	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................................................................................................GGTTCAAATCCGGCTCGAAGGA.......................	22	7	3.71	26	3	1	0	1	0	3	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0
...............................TTGGTAGAGCGGTGGACTGTAGA.......................................................................................	23	3	3.67	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11
.....................GATAGCTCAGTTGGTAGAG.....................................................................................................	19	10	3.60	36	0	0	0	0	0	1	1	8	1	2	0	0	2	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	6	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	0
...........ATCGACCTTCGATAGCTCAGTTGGTAGA......................................................................................................	28	2	3.50	7	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................ATCCATAGGTCGCTGGTT.........................................	18	8	3.50	28	0	0	3	1	0	0	0	1	0	2	0	0	0	0	1	1	4	2	2	3	0	0	1	0	1	0	0	0	0	1	0	1	0	0	0	1	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCT..............................	23	7	3.43	24	0	0	7	8	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCCGG................................	26	7	3.43	24	0	2	6	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
................CCTTCGATAGCTCAGTTGT..........................................................................................................	19	10	3.40	34	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	4	5	0	3	1	9	2	2	1	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGC...............................	24	7	3.29	23	0	0	17	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGC...............................	22	7	3.14	22	0	0	6	15	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........ATCGACCTTCGATAGCTCAGTTGGTAG.......................................................................................................	27	2	3.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................CATAGGTCGCTGGTTCAAAT....................................	20	8	3.00	24	0	0	1	0	0	2	1	0	0	0	0	0	0	0	0	0	1	0	0	0	6	0	1	0	0	0	0	0	0	4	1	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	2
.........................................................................T-TGTAGACATCCATAGGTCGCTG............................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
.....................................................................................CATAGGTCGCTGGTTCAAATC...................................	21	8	3.00	24	1	1	0	2	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	1	1	1	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	4
.............................................................................................................CTCGAAGGATCTCAGTTTTT-...........	20	1	3.00	3	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCTCGAA..........................	29	7	3.00	21	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	0	1	0	2	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0
...........ATCGACCTTCGATAGCTCAG..............................................................................................................	20	2	3.00	6	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................ATCCGGCTCGAAGGATCTCAGTTTTT-...........	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
......................ATAGCTCAGTTGGTAGAGCGGTGG...............................................................................................	24	7	2.86	20	0	0	0	0	2	2	4	2	1	2	3	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................AGCTCAGTTGGTAGAGCGGTGGACTG...........................................................................................	26	7	2.86	20	1	0	0	0	0	0	0	3	3	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCC..................................	19	19	2.84	54	1	0	20	27	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................TAGACATCCATAGGTCGCTGG...........................................	21	5	2.80	14	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	1	0	1	1	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0
.........................................................................................GGTCGCTGGTTCAAATCC..................................	18	20	2.75	55	0	0	25	15	0	0	0	1	0	0	0	0	0	0	1	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	2	0	0	2	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0
...........................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGA.......................	27	7	2.71	19	0	0	2	0	0	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	6
.......................................................................................TAGGTCGCTGGTTCAAATC...................................	19	8	2.63	21	0	3	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	6	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..............................................................................AGACATCCATAGGTCGCTGGT..........................................	21	5	2.60	13	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	1	0	0	0	0	1	0	1	1	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................TTGGTAGAGCGGTGGACTGTAGAG......................................................................................	24	2	2.50	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4
...........................................................................TGTAGACATCCATAGGTCGCT.............................................	21	2	2.50	5	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2
....................................AGAGCGGTGGACTGTAGAGT---GATA----T.........................................................................	25	2	2.50	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5
.....................................................................................CATAGGTCGCTGGTTCAAATCCGGC...............................	25	7	2.43	17	0	0	9	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCT..............................	22	7	2.43	17	0	0	6	1	0	0	0	0	0	0	0	0	0	0	1	1	0	1	1	1	0	2	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GGTTCAAATCCGGCTCGAAG.........................	20	7	2.43	17	0	0	1	5	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	3	0

droMoj3

CTC-CA--T----ACACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAGA---G----ACATGCAATG-TGTAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAT------GTT--GGTA-A-AATG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
................CCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	25	7	563.71	3946	491	215	68	90	1550	1532
.................................................................................................GTTCAAATCCGGCTCGAAG.........................	19	5	327.60	1638	488	2	10	13	1	1124
................CCTTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	28	6	236.00	1416	102	0	0	0	3	1311
.................................................................................................GTTCAAATCCGGCTCGAA..........................	18	5	122.20	611	190	2	7	13	3	396
................CCTTCGATAGCTCAGTTGGTAGA......................................................................................................	23	7	109.43	766	328	8	21	31	10	368
...................TCGATAGCTCAGTTGGTAGA......................................................................................................	20	7	85.14	596	13	0	4	5	1	573
................CCTTCGATAGCTCAGTTGG..........................................................................................................	19	7	39.71	278	159	20	25	32	6	36
..................TTCGATAGCTCAGTTGGTAGA......................................................................................................	21	7	34.00	238	51	1	16	29	0	141
......................................................................................ATAGGTCGCTGGTTCAAATCC..................................	21	5	32.00	160	98	1	0	0	3	58
....................CGATAGCTCAGTTGGTAGA......................................................................................................	19	7	30.29	212	49	1	4	9	1	148
......................................................................................ATAGGTCGCTGGTTCAAATCCGG................................	23	5	29.80	149	120	2	1	1	4	21
........................................................................................AGGTCGCTGGTTCAAATCCGG................................	21	5	26.20	131	119	3	0	0	5	4
................CCTTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	29	6	23.17	139	5	0	0	0	1	133
.....................................................................................CATAGGTCGCTGGTTCAAATCC..................................	22	5	23.00	115	63	0	1	0	0	51
................CCTTCGATAGCTCAGTTGGTAGAGCGT..................................................................................................	27	7	21.43	150	71	0	0	0	1	78
................CCTTCGATAGCTCAGTTG...........................................................................................................	18	7	20.86	146	24	40	36	30	9	7
................CCTTCGATAGCTCAGTTGGTAG.......................................................................................................	22	7	20.14	141	87	8	15	7	1	23
......................ATAGCTCAGTTGGTAGAG.....................................................................................................	18	7	17.43	122	90	0	0	0	1	31
.................CTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	24	7	15.86	111	44	1	0	0	58	8
.....................................................................................CATAGGTCGCTGGTTCAAATCCGG................................	24	5	14.80	74	72	0	0	0	1	1
.................................................................................................GTTCAAATCCGGCTCGAAGG........................	20	5	14.20	71	39	0	0	0	0	32
.....................................................AGA---G----ACATGCAATG-TGTAGAA...........................................................	21	1	14.00	14	11	1	0	0	2	0
........................................................................................AGGTCGCTGGTTCAAATCC..................................	19	5	13.80	69	62	0	0	0	4	3
......................ATAGCTCAGTTGGTAGAGC....................................................................................................	19	7	13.00	91	48	0	8	14	3	18
................CCTTCGATAGCTCAGTTGGT.........................................................................................................	20	7	11.86	83	43	0	5	4	3	28
......................................................................................ATAGGTCGCTGGTTCAAAT....................................	19	5	11.20	56	10	0	0	2	0	44
................CCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	24	7	11.00	77	54	2	0	2	9	10
...................TCGATAGCTCAGTTGGTAGAGC....................................................................................................	22	7	10.86	76	8	1	4	3	17	43
................CCTTCGATAGCTCAGTTGGTA........................................................................................................	21	7	10.71	75	47	2	3	6	1	16
.........................................................................................GGTCGCTGGTTCAAATCC..................................	18	5	10.60	53	46	0	0	0	4	3
..................TTCGATAGCTCAGTTGGTAGAGC....................................................................................................	23	7	10.57	74	26	1	1	1	24	21
.....................GATAGCTCAGTTGGTAGA......................................................................................................	18	7	10.14	71	21	3	2	5	1	39
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG................................	27	5	9.40	47	42	0	1	0	2	2
................................................................................................GGTTCAAATCCGGCTCGAAG.........................	20	5	8.80	44	37	0	1	3	1	2
................CCTTCGATAGCTCAGTTGGAGA.......................................................................................................	22	7	8.71	61	0	0	0	0	0	61
..................................................................................................TTCAAATCCGGCTCGAAG.........................	18	5	8.20	41	36	1	0	0	0	4
................CCTTCGATAGCTCAGTTGGTAGAGCGTG.................................................................................................	28	7	7.57	53	1	0	0	0	0	52
................................................................................................GGTTCAAATCCGGCTCGAA..........................	19	5	7.40	37	33	0	1	0	2	1
.......................................................................................TAGGTCGCTGGTTCAAATCCGG................................	22	5	7.20	36	29	1	0	0	1	5
...............................................................................................TGGTTCAAATCCGGCTCGAAG.........................	21	5	7.20	36	21	0	0	0	0	15
......................ATAGCTCAGTTGGTAGAGCGGTGGA..............................................................................................	25	6	7.00	42	1	17	0	0	17	7
..................TTCGATAGCTCAGTTGGTAG.......................................................................................................	20	7	7.00	49	23	3	3	6	0	14
.........................................................................................GGTCGCTGGTTCAAATCCGG................................	20	5	6.80	34	29	2	0	0	0	3
................CCTTCGATAGCTCAGTTGGTAGAGCGG..................................................................................................	27	6	6.50	39	29	1	0	0	1	8
.................................................................................................GTTCAAATCCGGCTCGAAGGA.......................	21	5	6.00	30	10	0	0	0	0	20
......................................................................................ATAGGTCGCTGGTTCAAATC...................................	20	5	5.80	29	13	0	0	0	1	15
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAA..........................	27	5	5.80	29	29	0	0	0	0	0
...................TCGATAGCTCAGTTGGTAG.......................................................................................................	19	7	5.43	38	5	0	4	0	0	29
...............................................................................................TGGTTCAAATCCGGCTCG............................	18	5	5.20	26	21	0	0	0	0	5
......................................................................................ATAGGTCGCTGGTTCAAATCCG.................................	22	5	5.20	26	7	0	0	0	0	19
........................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG.........................	28	5	4.80	24	24	0	0	0	0	0
................CCTTCGATAGCTCAGTTGT..........................................................................................................	19	7	4.71	33	30	0	0	0	1	2
.................CTTCGATAGCTCAGTTGGTAGA......................................................................................................	22	7	4.57	32	30	0	0	0	0	2
..............................GTTGGTAGAGCGGTGGAC.............................................................................................	18	6	4.50	27	4	0	0	0	16	7
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG.........................	27	5	4.40	22	22	0	0	0	0	0
.....A--T----ACACCTTCGATAGCTCAGTTGG..........................................................................................................	24	1	4.00	4	2	1	0	0	1	0
..................................................................................ATCCATAGGTCGCTGGTTC........................................	19	6	4.00	24	20	0	1	0	2	1
.....................................................AGA---G----ACATGCAATG-TGTAGA............................................................	20	1	4.00	4	4	0	0	0	0	0
.............................AGTTGGTAGAGCGGTGGA..............................................................................................	18	6	3.83	23	10	1	1	0	0	11
.......................................................................................TAGGTCGCTGGTTCAAATCC..................................	20	5	3.80	19	14	0	0	0	1	4
..................................................................................ATCCATAGGTCGCTGGTT.........................................	18	7	3.43	24	18	0	0	0	5	1
....................CGATAGCTCAGTTGGTAGAGC....................................................................................................	21	7	3.14	22	6	2	1	3	6	4
...................TCGATAGCTCAGTTGGTAGAG.....................................................................................................	21	7	3.00	21	0	1	0	1	1	18
.............................AGTTGGTAGAGCGGTGGAC.............................................................................................	19	6	3.00	18	8	0	1	0	6	3
.....A--T----ACACCTTCGATAGCTCAGTTGGTAG.......................................................................................................	27	1	3.00	3	2	0	0	0	1	0
.................CTTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	27	6	3.00	18	12	0	0	0	0	6
.....................................................................................CATAGGTCGCTGGTTCAAAT....................................	20	5	3.00	15	3	0	2	0	0	10
.....................GATAGCTCAGTTGGTAGAGC....................................................................................................	20	7	2.86	20	1	0	1	1	7	10
........................................................................................AGGTCGCTGGTTCAAATCCGGCT..............................	23	5	2.80	14	13	0	0	0	1	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCTC.............................	26	5	2.80	14	9	0	0	0	4	1
..................................................................................ATCCATAGGTCGCTGGTTCAAATCC..................................	25	5	2.80	14	14	0	0	0	0	0
........................................................................................AGGTCGCTGGTTCAAATCCGGCTC.............................	24	5	2.60	13	12	0	0	0	1	0
..........................................................................................GTCGCTGGTTCAAATCCGG................................	19	5	2.60	13	12	0	0	0	0	1
.....................................................................................CATAGGTCGCTGGTTCAAATCCG.................................	23	5	2.60	13	7	0	0	0	0	6
........................................................................................AGGTCGCTGGTTCAAATCCG.................................	20	5	2.60	13	6	1	1	0	0	5
..................................................................................ATCCATAGGTCGCTGGTTCA.......................................	20	5	2.40	12	10	1	0	0	0	1
.......................................................................................TAGGTCGCTGGTTCAAAT....................................	18	5	2.40	12	3	1	0	0	0	8
.........................................................................................GGTCGCTGGTTCAAATCCGGCT..............................	22	5	2.40	12	11	0	1	0	0	0
............................CAGTTGGTAGAGCGGTGGA..............................................................................................	19	6	2.33	14	5	0	0	1	0	8
.....................................................................................CATAGGTCGCTGGTTCAAATC...................................	21	5	2.20	11	3	0	0	0	0	8
...................................................................................TCCATAGGTCGCTGGTTCAAATCCGG................................	26	5	2.20	11	9	0	0	0	2	0
..................TTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	27	6	2.17	13	12	0	0	0	0	1
..................TTCGATAGCTCAGTTGGTA........................................................................................................	19	7	2.14	15	11	0	0	1	0	3
.................CTTCGATAGCTCAGTTGG..........................................................................................................	18	7	2.14	15	14	0	1	0	0	0
..................TTCGATAGCTCAGTTGGTAGAG.....................................................................................................	22	7	2.14	15	2	1	0	2	1	9
......................ATAGCTCAGTTGGTAGAGCGC..................................................................................................	21	7	2.00	14	5	0	0	0	0	9
......................................................GA---G----ACATGCAATG-TGTAGAA...........................................................	20	1	2.00	2	2	0	0	0	0	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGGCT..............................	24	5	2.00	10	8	0	0	0	1	1
.....A--T----ACACCTTCGATAGCTCAG..............................................................................................................	20	1	2.00	2	1	0	0	0	1	0
...................TCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	25	6	1.83	11	0	0	0	0	0	11
......................................................................................ATAGGTCGCTGGTTCAAATCCGGC...............................	24	5	1.80	9	7	0	0	0	1	1
...................................................................................TCCATAGGTCGCTGGTTCAAATCC..................................	24	5	1.80	9	7	0	0	0	2	0
.......................................................................................TAGGTCGCTGGTTCAAATC...................................	19	5	1.80	9	6	0	0	0	1	2
........................................................................................AGGTCGCTGGTTCAAATCCGGC...............................	22	5	1.60	8	6	0	0	0	2	0
...................................................................................................TCAAATCCGGCTCGAAGG........................	18	5	1.60	8	4	0	0	0	0	4
........................................................................................AGGTCGCTGGTTCAAATC...................................	18	5	1.60	8	5	1	0	0	2	0
..........................................................................................GTCGCTGGTTCAAATCCGGC...............................	20	5	1.60	8	3	0	0	0	5	0
..........................................................................................GTCGCTGGTTCAAATCCGGCT..............................	21	5	1.40	7	7	0	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAA..........................	26	5	1.40	7	6	0	0	0	0	1
..................TTCGATAGCTCAGTTGGTAGAGCGGT.................................................................................................	26	6	1.33	8	4	0	0	1	0	3
........................AGCTCAGTTGGTAGAGCGGTG................................................................................................	21	6	1.33	8	0	0	0	0	0	8
.................CTTCGATAGCTCAGTTGGTAGAGCGT..................................................................................................	26	7	1.29	9	8	0	0	0	0	1
.....................GATAGCTCAGTTGGTAGAG.....................................................................................................	19	7	1.29	9	1	0	0	1	1	6
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCT..............................	25	5	1.20	6	6	0	0	0	0	0
.........................................................................................GGTCGCTGGTTCAAATCCG.................................	19	5	1.20	6	4	0	0	0	0	2
..............................................................................................CTGGTTCAAATCCGGCTCGAA..........................	21	5	1.20	6	5	0	0	0	0	1
...............................................................................................TGGTTCAAATCCGGCTCGAA..........................	20	5	1.20	6	5	0	0	0	0	1
.....................................................................................CATAGGTCGCTGGTTCAAATCCGGCT..............................	26	5	1.20	6	5	0	0	1	0	0
..........................................................................................GTCGCTGGTTCAAATCCGGCTCGAAG.........................	26	5	1.20	6	6	0	0	0	0	0
......................................................................................ATAGGTCGCTGGTTCAAA.....................................	18	5	1.20	6	1	0	0	0	1	4
...........................TCAGTTGGTAGAGCGGTGGA..............................................................................................	20	6	1.17	7	3	0	0	0	0	4
...................TCGATAGCTCAGTTGGTAGAGCGGTG................................................................................................	26	6	1.17	7	2	0	0	0	1	4

droGri2

ACACTAAGTGTATCGACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTGA---GAAA---TTGCAACGTTGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCTCAATTTTTTTG-----TTTT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
................CCTTCGATAGCTCAGTTG...........................................................................................................	18	12	152.33	1828	1819	9
................CCTTCGATAGCTCAGTTGGTAGA......................................................................................................	23	11	139.91	1539	631	908
.................................................................................................GTTCAAATCCGGCTCGAAG.........................	19	8	102.38	819	331	488
......................................................................................ATAGGTCGCTGGTTCAAATCC..................................	21	8	99.38	795	658	137
..................................................................................ATCCATAGGTCGCTGGTTC........................................	19	8	66.13	529	522	7
....................CGATAGCTCAGTTGGTAGA......................................................................................................	19	11	56.73	624	167	457
................CCTTCGATAGCTCAGTTGG..........................................................................................................	19	12	53.33	640	568	72
.................................................................................................GTTCAAATCCGGCTCGAA..........................	18	8	47.75	382	209	173
................CCTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	25	10	45.00	450	222	228
..................................................................................ATCCATAGGTCGCTGGTT.........................................	18	8	44.88	359	358	1
.........................................................................................GGTCGCTGGTTCAAATCC..................................	18	8	35.25	282	280	2
................CCTTCGATAGCTCAGTTGGTA........................................................................................................	21	11	33.91	373	280	93
..................TTCGATAGCTCAGTTGGTAGA......................................................................................................	21	11	31.73	349	114	235
..................................................................................ATCCATAGGTCGCTGGTTCA.......................................	20	8	25.38	203	190	13
...................TCGATAGCTCAGTTGGTAGA......................................................................................................	20	11	24.36	268	51	217
...................................................................................TCCATAGGTCGCTGGTTC........................................	18	8	23.00	184	184	0
......................................................................................ATAGGTCGCTGGTTCAAATCCGG................................	23	8	22.50	180	146	34
.....................GATAGCTCAGTTGGTAGA......................................................................................................	18	11	22.27	245	185	60
..............................................................................................CTGGTTCAAATCCGGCTC.............................	18	8	22.25	178	178	0
......................................................................................ATAGGTCGCTGGTTCAAATC...................................	20	8	21.38	171	127	44
................CCTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	24	11	20.45	225	174	51
................CCTTCGATAGCTCAGTTGGTAG.......................................................................................................	22	11	17.27	190	147	43
.......................................................................................TAGGTCGCTGGTTCAAATCC..................................	20	8	14.88	119	108	11
........................................................................................AGGTCGCTGGTTCAAATCC..................................	19	8	14.63	117	117	0
......................................................................................ATAGGTCGCTGGTTCAAATCCG.................................	22	8	14.38	115	83	32
......................................................................................ATAGGTCGCTGGTTCAAAT....................................	19	8	13.75	110	65	45
.................CTTCGATAGCTCAGTTGGTAGA......................................................................................................	22	11	13.09	144	93	51
.................................................................................................GTTCAAATCCGGCTCGAAGG........................	20	8	12.75	102	53	49
..............................................................................................CTGGTTCAAATCCGGCTCGAAG.........................	22	8	12.63	101	97	4
.....................................................................................CATAGGTCGCTGGTTCAAATCC..................................	22	8	11.63	93	74	19
..............................................................................................CTGGTTCAAATCCGGCTCGAA..........................	21	8	10.75	86	66	20
..............................................................................................CTGGTTCAAATCCGGCTCG............................	19	8	10.38	83	68	15
.....................GATAGCTCAGTTGGTAGAG.....................................................................................................	19	11	10.36	114	47	67
.....................................................................................................AAATCCGGCTCGAAGGAC......................	18	9	10.33	93	87	6
...............................................................................................TGGTTCAAATCCGGCTCGA...........................	19	8	9.25	74	19	55
...................................................................................TCCATAGGTCGCTGGTTCA.......................................	19	8	8.25	66	63	3
.........................................................................................GGTCGCTGGTTCAAATCCGG................................	20	8	7.50	60	57	3
.........................................................................................GGTCGCTGGTTCAAATCCG.................................	19	8	7.50	60	56	4
..............................................................................................CTGGTTCAAATCCGGCTCGAAGG........................	23	8	6.88	55	46	9
......................ATAGCTCAGTTGGTAGAG.....................................................................................................	18	11	6.55	72	61	11
..............................................................................................CTGGTTCAAATCCGGCTCGAAGGA.......................	24	8	6.38	51	33	18
.....................................................TGA---GAAA---TTGCAACGTTGTAGAC...........................................................	23	1	6.00	6	3	3
..................TTCGATAGCTCAGTTGGTAGAG.....................................................................................................	22	11	5.82	64	37	27
.....................................................................................CATAGGTCGCTGGTTCAAATCCGG................................	24	8	5.63	45	43	2
.....................GATAGCTCAGTTGGTAGAGC....................................................................................................	20	10	5.40	54	15	39
..................TTCGATAGCTCAGTTGGTAG.......................................................................................................	20	11	5.36	59	50	9
....................CGATAGCTCAGTTGGTAGAG.....................................................................................................	20	11	5.18	57	32	25
...............................................................................................TGGTTCAAATCCGGCTCGAAG.........................	21	8	5.13	41	24	17
........................................................................................AGGTCGCTGGTTCAAATCCGG................................	21	8	4.88	39	37	2
..................................................................................ATCCATAGGTCGCTGGTTCAAATCC..................................	25	8	4.63	37	36	1
....................CGATAGCTCAGTTGGTAG.......................................................................................................	18	11	4.55	50	49	1
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG.........................	27	8	4.50	36	36	0
..................................................................................................TTCAAATCCGGCTCGAAG.........................	18	8	4.50	36	35	1
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCTC.............................	26	8	4.25	34	33	1
.................CTTCGATAGCTCAGTTGG..........................................................................................................	18	12	4.17	50	49	1
.............................................................................................GCTGGTTCAAATCCGGCTCGAAG.........................	23	8	4.13	33	33	0
.......................................................................................TAGGTCGCTGGTTCAAATCCGG................................	22	8	4.13	33	32	1
...............................................................................................TGGTTCAAATCCGGCTCGAA..........................	20	8	4.13	33	18	15
................................................................................................GGTTCAAATCCGGCTCGAAG.........................	20	8	4.00	32	19	13
.................CTTCGATAGCTCAGTTGGTA........................................................................................................	20	11	3.55	39	35	4
......................................................................................ATAGGTCGCTGGTTCAAA.....................................	18	8	3.50	28	18	10
................CCTTCGATAGCTCAGTTGGT.........................................................................................................	20	12	3.42	41	33	8
..............................................................................................CTGGTTCAAATCCGGCTCGA...........................	20	8	3.38	27	19	8
.......................................................................................TAGGTCGCTGGTTCAAATC...................................	19	8	3.38	27	25	2
.................CTTCGATAGCTCAGTTGGTAGAGC....................................................................................................	24	10	3.30	33	31	2
..................TTCGATAGCTCAGTTGGTA........................................................................................................	19	11	3.27	36	31	5
.................................................................................................GTTCAAATCCGGCTCGAAGGA.......................	21	8	3.25	26	14	12
........................................................................................AGGTCGCTGGTTCAAATC...................................	18	8	3.25	26	25	1
...............................................................................................TGGTTCAAATCCGGCTCG............................	18	8	3.00	24	20	4
................................................................................................GGTTCAAATCCGGCTCGAA..........................	19	8	3.00	24	20	4
..................TTCGATAGCTCAGTTGGTAGAGC....................................................................................................	23	10	3.00	30	28	2
....................CGATAGCTCAGTTGGTAGAGC....................................................................................................	21	10	2.90	29	11	18
...................TCGATAGCTCAGTTGGTAGAG.....................................................................................................	21	11	2.82	31	18	13
...................................................................................................TCAAATCCGGCTCGAAGG........................	18	8	2.63	21	14	7
.............................................................................................GCTGGTTCAAATCCGGCTCG............................	20	8	2.63	21	21	0
..................................GTAGAGCGGTGGACTGTA.........................................................................................	18	7	2.57	18	1	17
......................ATAGCTCAGTTGGTAGAGC....................................................................................................	19	10	2.30	23	13	10
.............................................................................................GCTGGTTCAAATCCGGCTCGAAGGAC......................	26	8	2.25	18	18	0
.................CTTCGATAGCTCAGTTGGTAGAG.....................................................................................................	23	11	2.18	24	22	2
.................................................................................................GTTCAAATCCGGCTCGAAGGAC......................	22	8	2.13	17	10	7
.....................................................................................CATAGGTCGCTGGTTCAAATC...................................	21	8	2.13	17	11	6
...................................................................................TCCATAGGTCGCTGGTTCAAATCC..................................	24	8	2.13	17	16	1
.........................................................................................GGTCGCTGGTTCAAATCCGGCTC.............................	23	8	2.13	17	17	0
..............................................................................................CTGGTTCAAATCCGGCTCGAAGGAC......................	25	8	2.00	16	12	4
.......................................................................................TAGGTCGCTGGTTCAAATCCG.................................	21	8	2.00	16	13	3
.............................................................................................GCTGGTTCAAATCCGGCTCGAAGG........................	24	8	2.00	16	16	0
....................................................................................................CAAATCCGGCTCGAAGGA.......................	18	8	1.88	15	7	8
................................................................................................GGTTCAAATCCGGCTCGAAGG........................	21	8	1.88	15	10	5
...................TCGATAGCTCAGTTGGTAG.......................................................................................................	19	11	1.82	20	12	8
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCG............................	24	8	1.63	13	13	0
............................CAGTTGGTAGAGCGGTGGA..............................................................................................	19	7	1.57	11	3	8
........................................................................................AGGTCGCTGGTTCAAATCCG.................................	20	8	1.50	12	11	1
..................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG................................	27	8	1.50	12	12	0
...................TCGATAGCTCAGTTGGTA........................................................................................................	18	11	1.45	16	16	0
...................................................................................TCCATAGGTCGCTGGTTCAAATCCGG................................	26	8	1.38	11	11	0
.......................................................................................TAGGTCGCTGGTTCAAAT....................................	18	8	1.38	11	11	0
....................................................................................CCATAGGTCGCTGGTTCA.......................................	18	8	1.25	10	10	0
...........................................................................................TCGCTGGTTCAAATCCGG................................	18	8	1.25	10	10	0
...................................................................................................TCAAATCCGGCTCGAAGGA.......................	19	8	1.25	10	5	5
...............................................................................................TGGTTCAAATCCGGCTCGAAGGA.......................	23	8	1.25	10	2	8
..........................................................................................GTCGCTGGTTCAAATCCGGCTCGAAG.........................	26	8	1.25	10	10	0
..................TTCGATAGCTCAGTTGGT.........................................................................................................	18	12	1.25	15	15	0
................................................................................................GGTTCAAATCCGGCTCGAAGGA.......................	22	8	1.25	10	8	2
...................TCGATAGCTCAGTTGGTAGAGC....................................................................................................	22	10	1.20	12	8	4
................CCTTCGATAGCTCAGTTGGTAGC......................................................................................................	23	11	1.18	13	0	13
................CCTTCGATAGCTCAGTTGGTAGG......................................................................................................	23	11	1.18	13	1	12
.....................................................................................CATAGGTCGCTGGTTCAAATCCG.................................	23	8	1.13	9	5	4
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCT..............................	25	8	1.13	9	8	1
..................................................................................................TTCAAATCCGGCTCGAAGG........................	19	8	1.13	9	5	4
......................................................................................ATAGGTCGCTGGTTCAAATCCGGC...............................	24	8	1.13	9	8	1
..........................................................................................GTCGCTGGTTCAAATCCGG................................	19	8	1.13	9	9	0
.........................................................................................GGTCGCTGGTTCAAATCCGGCTCGAA..........................	26	8	1.13	9	9	0
................................................................................................GGTTCAAATCCGGCTCGA...........................	18	8	1.13	9	8	1
.................CTTCGATAGCTCAGTTGGTAG.......................................................................................................	21	11	1.09	12	11	1
........................................................................CGTTGTAGACATCCATAGGTCGCTGG...........................................	26	1	1.00	1	1	0
.....................................................................................................AAATCCGGCTCGAAGGATC.....................	19	4	1.00	4	0	4
..........................................GTGGACTGTAGTGA---GAAA---TTGC.......................................................................	22	1	1.00	1	0	1
....................................................GTGA---GAAA---TTGCAACGTT.................................................................	18	1	1.00	1	1	0
.............................................................AA---TTGCAACGTTGTAGAC...........................................................	18	1	1.00	1	1	0
...........ATCGACCTTCGATAGCTCAG..............................................................................................................	20	1	1.00	1	1	0
..................................................................................ATCCATAGGTCGCTGGTTCAAATC...................................	24	8	1.00	8	8	0
.........................................GGTGGACTGTAGTGA---GAAA---TTGCAACG...................................................................	27	1	1.00	1	0	1
....................................................GTGA---GAAA---TTGCAACGTTGTAGACATCC.......................................................	28	1	1.00	1	1	0
...............................................................................................TGGTTCAAATCCGGCTCGAAGG........................	22	8	1.00	8	5	3
.........................................................................GTTGTAGACATCCATAGG..................................................	18	1	1.00	1	1	0
.....................................................................................CATAGGTCGCTGGTTCAAATCCGGCTC.............................	27	8	1.00	8	8	0
..............................................ACTGTAGTGA---GAAA---TTGC.......................................................................	18	1	1.00	1	1	0
......................................AGCGGTGGACTGTAGTGA---GAAA---TTGC.......................................................................	26	1	1.00	1	0	1
......................................................GA---GAAA---TTGCAACGTTGTAGAC...........................................................	22	1	1.00	1	1	0
......................................................GA---GAAA---TTGCAACGTTGTA..............................................................	19	1	1.00	1	1	0
.................................................................................................GTTCAAATCCGGCTCGAG..........................	18	8	0.88	7	3	4
......................................................................................ATAGGTCGCTGGTTCAAATCCGGCTCG............................	27	8	0.88	7	7	0
............................CAGTTGGTAGAGCGGTGGACT............................................................................................	21	7	0.86	6	2	4
.........................................................................................GGTCGCTGGTTCAAATCCGGCT..............................	22	8	0.75	6	6	0
.............................................................................................GCTGGTTCAAATCCGGCTCGAA..........................	22	8	0.75	6	5	1
...................................................................................TCCATAGGTCGCTGGTTCAAAT....................................	22	8	0.75	6	6	0

dya_977

3R:8557334-8557354 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads