ID:

dya_974

 Coordinate:

3R:8522917-8523067 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.3 -37.9 -37.7

Flybase annnotation

exon [dyak_GLEANR_8499:2]; CDS [Dyak\GE24841-cds]; intron [Dyak\GE24841-in]

Repeatable elements

NameClassFamilyStrand
Hoyak2DNAhAT-Ac+
DNAREP1_DYakRCHelitron-
mature
  1. 3L:22148306-22148329 +
  2. 3L:23799951-23799974 +
  3. 2R:1116349-1116372 -
  4. dya_427  2R:1168434-1168457 +
  5. 2R:1426397-1426420 -
  6. X:21533743-21533766 -
  7. v2_chrUn_1963:185-208 -
  8. v2_chrUn_4547:1186-1209 +
  9. v2_chrUn_2547:920-943 -
  10. v2_chrUn_4811:15-38 -
  11. v2_chrUn_3559:382-405 +
  12. v2_chrUn_5709:68781-68804 +
  13. v2_chrUn_5709:72808-72831 +
  14. v2_chr2h_random_004:1147152-1147175 +
  15. v2_chr2L_random_019:57558-57581 +
  16. v2_chr2L_random_028:1088608-1088631 +
  17. v2_chr3L_random_067:22704-22727 +
  18. v2_chrUn_008:236079-236102 +
  19. v2_chrUn_554:84786-84809 +
  20. v2_chrUn_700:53514-53537 +
  21. 3R:7482485-7482508 -
  22. 3R:7486325-7486348 -
  23. v2_chrUn_3358:18-41 -
  24. v2_chrUn_5405:110107-110130 -
  25. v2_chrUn_554:88130-88153 -
  26. v2_chrUn_690:16812-16835 -
  27. 3L:23766378-23766401 -
  28. 3L:23893823-23893846 -
  29. 2R:1204055-1204078 -
  30. dya_974  3R:8522926-8522949 -
  31. v2_chrUn_5710:5806-5829 -
  32. v2_chrUn_159:7225-7248 -
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTTCATCAATAAAAAAAAAAGCATTAAGTTTAGAATTTATTGTTTTAATATTATGTTTCATATTATTTATGTTTAGCATTTAGAGTGTTACACCACACCCCGCACCCCTGCCAGTGTGGAAATTGCACTTCCAGCCGCTGAGTAACGGGTATCAGATAGTCGGGGAACTCGACTATAGCGTTCTCTCTTGCTTATATTAGTTTGCTGCAAGAGGAGTTGCTGCTGGGAGACGCGACCCGGGAATTAAATC
**************************************************...(((((.((((.....))))...)))))...((((((....((((((...(((....)))..)))))).....))))))..(((....(((.((((........(((((((((...)))))))))..)))))))....)))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 V120
male body		 V046
embryo
 GSM1528802
follicle cells		 M026
head
...............................TAGAATTTATTGTTTTAAT......................................................................................................................................................................................................... 19 0 1 6.00 6 2 1 1 2 0 0
...............................TAGAATTTATTGTTTTAATATT...................................................................................................................................................................................................... 22 0 1 5.00 5 4 1 0 0 0 0
............................GTTTAGAATTTATTGTTTTA........................................................................................................................................................................................................... 20 0 1 5.00 5 4 1 0 0 0 0
.....................CTTTTAAGTTTAGAATTTATTGTTTT............................................................................................................................................................................................................ 26 3 1 3.00 3 2 1 0 0 0 0
.....................CTTTTAAGTTTAGAATTTATTGTT.............................................................................................................................................................................................................. 24 3 1 3.00 3 3 0 0 0 0 0
...............................TAGAATTTATTGTTTTAATATTATT................................................................................................................................................................................................... 25 1 1 3.00 3 0 1 0 0 2 0
............................GTTTAGAATTTATTGTTTT............................................................................................................................................................................................................ 19 0 1 2.00 2 1 0 0 0 0 1
.......................TTTAAGTTTAGAATTTATTGTTTTAAT......................................................................................................................................................................................................... 27 1 1 2.00 2 0 0 1 1 0 0
............................GTTTAGAATTTATTGTTTTAATATT...................................................................................................................................................................................................... 25 0 1 2.00 2 1 0 1 0 0 0
......................TTTTAAGTTTAGAATTTATTGTTTTAAT......................................................................................................................................................................................................... 28 2 1 2.00 2 0 0 2 0 0 0
..........................AAGTTTAGAATTTATTGTTTTAATATT...................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
................................AGAATTTATTGTTTTAATATT...................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.........................TAAGTTTAGAATTTATTGTTTTA........................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
............................GTTTAGAATTTATTGTTTTAA.......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
...........................AGTTTAGAATTTATTGTTTTAATATT...................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..............................TTAGAATTTATTGTTTTAATATT...................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
............................GTTTAGAAGTTATTGTTTTAATA........................................................................................................................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
.................................GAATTTATTGTTTTAATATT...................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
..............................TTAGAATTTATTGTTTTAATATTA..................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
................................AGAATTTATTGTTTTAATATTATTT.................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
................................AGAATTTATTGTTTTAATATTATT................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
.......................TTTAAGTTTAGAATTTATTGTTTT............................................................................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
.........................TAAGTTTAGAATTTATTGTTTTAATATT...................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0
........................TTAAGTTTAGAATTTATTGT............................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0
..............................TTAGAATTTATTGTTTTAATA........................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
.................................GAATTTATTGTTTTAATATTATT................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...........................AGTTTAGAATTTATTGTTTT............................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0
................................AGAATTTATTGTTTTAATATTA..................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
......................TTTTAAGTTTAGAATTTATTGTTTTA........................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 1 0 0 0
...............................TAGAATTTATTGTTTTAATCTTATT................................................................................................................................................................................................... 25 2 1 1.00 1 0 0 0 0 1 0
.....................CTTTTAAGTTTAGAATTTATTGTTT............................................................................................................................................................................................................. 25 3 1 1.00 1 1 0 0 0 0 0
................................AGAATTTATTGTTTTAAT......................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0
......................TTTTAAGTTTAGAATTTATTGTTTT............................................................................................................................................................................................................ 25 2 1 1.00 1 1 0 0 0 0 0
............................GTTTAGAATTTATTGTTTTAATA........................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
...............................TAGAATTTATTGTTTTAATA........................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
........................TTAAGTTTAGAATTTATTGTTTTA........................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................CTCGACTATAGCGTTCTCTCTTGC........................................................... 24 0 20 0.80 16 0 16 0 0 0 0
.....................CTTTTAAGTTTAGAATTTATTGT............................................................................................................................................................................................................... 23 3 6 0.50 3 2 0 1 0 0 0
....................TGCAATAAGTTTAGAATTTAT.................................................................................................................................................................................................................. 21 2 4 0.50 2 2 0 0 0 0 0
.............................................................................................................................................................................................................................TTCTAAGAGACGCGACCCG........... 19 3 3 0.33 1 0 0 0 0 0 1
....................TGCAATAAGTTTAGAATTTA................................................................................................................................................................................................................... 20 2 7 0.29 2 2 0 0 0 0 0
....................ACTTTTAAGTTTAGAATTTATT................................................................................................................................................................................................................. 22 3 20 0.20 4 4 0 0 0 0 0
......................................................................................................................................................................AACTCGACTATAGCGTTCTCTCTTGC........................................................... 26 0 20 0.20 4 0 4 0 0 0 0
....................................................................TATTTTTAACATTTAGAGT.................................................................................................................................................................... 19 2 12 0.17 2 1 0 1 0 0 0
..............................................................................ATTTAGAGTATGACACCA........................................................................................................................................................... 18 2 7 0.14 1 0 0 0 0 0 1
..............................................................................................GAGACCCTGCACCCCTGCCA......................................................................................................................................... 20 3 8 0.13 1 1 0 0 0 0 0
...........................ATCTTAGAATTTATTGTTTT............................................................................................................................................................................................................ 20 2 9 0.11 1 0 1 0 0 0 0
......................TTTTAAGTTTAGAATTTATT................................................................................................................................................................................................................. 20 2 18 0.11 2 1 0 1 0 0 0
............................................................................GGATTTAGAGTATGACACC............................................................................................................................................................ 19 3 15 0.07 1 0 1 0 0 0 0
......................................................................................................................................................TATCAGATAGTCGGGGAACTCG............................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................CGCGAAGCGGGAACTAAAT. 19 3 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................CTAGACTATAGCGTTCTCTCTTGC........................................................... 24 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................CTCGACTATAGCGTTCTCTCCTGC........................................................... 24 1 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

AAAAGTAGTTATTTTTTTTTTCGTAATTCAAATCTTAAATAACAAAATTATAATACAAAGTATAATAAATACAAATCGTAAATCTCACAATGTGGTGTGGGGCGTGGGGACGGTCACACCTTTAACGTGAAGGTCGGCGACTCATTGCCCATAGTCTATCAGCCCCTTGAGCTGATATCGCAAGAGAGAACGAATATAATCAAACGACGTTCTCCTCAACGACGACCCTCTGCGCTGGGCCCTTAATTTAG
**************************************************...(((((.((((.....))))...)))))...((((((....((((((...(((....)))..)))))).....))))))..(((....(((.((((........(((((((((...)))))))))..)))))))....)))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total V058
head
 M056
embryo
 M043
female body
................................................................................................GTCGGGCGTGGGGACCGACAC...................................................................................................................................... 21 3 2 0.50 1 1 0 0
.............................................................................................................................................................ATCAGCCCCTTGAGCTGATATCGC...................................................................... 24 0 20 0.40 8 0 8 0
..............................................................................................................................................................TCAGCCCCTTGAGCTGATATC........................................................................ 21 0 20 0.20 4 0 0 4

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3R:8522867-8523117 - dya_974 TTTTCATCAATAA--A--AAAAAA-------------------------------AGCATTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATTATGTTTCATATTATTTATG--------------------------------------TTTAGCATTTAGAGTGTTACACCACACCCCGCACCCCTGCCA-----GTGTGGA---AAT--------TGC--ACTTCCAGCCGCTGAGTAACGGGTATCAGATAGTCGGG----GAACTCGACTATAGC-GTTCTCTCTTGCT--TATA-TTAGTTTGCTGCAAGAGGAGTTGCTGCTGGGAGACGCGACCCGGGAATTAAATC
droEre2 scaffold_4929:18180800-18180998 + TTTTTATCGATTT--G--CCAAAA-------------------------------AACATT----------------------------------A---GGAAACATTTTTAATTATTTT-TTTCA---------------------------------------------TTTTATT------------ATT------------------------------------------------------GTATTCCCAATTTCGATAGACATGCCAAAAAAATGTATA---AATATCTCGATGGC--ACTTTCATTAGCTCTGTAATGGGTATCTGAAAGTCGGG----GAACTCGGCTATAGC-GTTCTCTCTTGTT--TTTA-TTAATATTTTAC-----------------------------------------A
droSec2 scaffold_3:6101219-6101404 + TTCCAATCTTTAA--C--AAC-AT---------------------------ATAG--CATTCAGATTCTGGAGACTTTGCACGTTTGAAAAATGTTTTTGA-------------TATTTT-GTTCG------------------------------TTTAAA---------TACCATTCTTTC--CTATCCATTTAT----------------------------------------------------------------------------------GTGAGGA---AA---------------GATATAGATGATGAGTGACGGGTAACAGATAGTCGAG----GAACTCGGCTATAGT-GTTTTCTCTTGTT--TTTA-------------------------------------------------------
droSim2 3l:18547677-18547899 + GTAGCGTG---------C--AAAAAGCGTAGATTTTTGAAAACGATTATGA----ATTGTTGGTTTT------------------------------------------TAAGCTTAATGTTTTTA---------------------------------------------ATTTTATT-----------ATT------------------------------------------------------TTTATGACAATCTCCATCGGTTTGCCAAAGTTATGTTGA---AATTTCCGGTTAAT--ACTCCCAGTAGCTAATTAACAAGTATCTGTTAGTCGAG----GAAGTCGCCTATAGC-ATTTTCTCTTGTT--TTTG-CTCAATAAGA---------GGTGCTTTT-------------------------G
dm3 chr2L:15902655-15902853 + TATACTTATATTA--TATAAAAAA-------------------------------AGC-------------------------------------AAATGAT---------TTTTTTTAGTTTTATTTTTATTTTTTTGC-------------------------------AAGTACACTTTCTATTT-------------------------CGCTTTGTCACTATGTAAA-----------------------------------------------TCATACA---TTGCTTACGTTCGC--ATTTTCACCAGCTGAGTAAGAGGTATCTGATAGTCGAG----GAACTCGACTTCAAC-GATCA-TCTTGTTTATTTA-TTAATTGACT--------------------------------------------
droEug1 scf7180000407052:25550-25652 + A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAACGGGTATCTTATAGTCGCG----GCACTCGACTATAGC-GTTTCCTCTTGTT--TTTAACTAGATAACTCCCTGGG----TGTGACTCGACGACGCGACCCAGTAGCT----A
droBia1 scf7180000302041:315685-315891 + AAAGAAAT---------C--AAA--------------------------------AATTCTGAATAT------------------------------------------AGCATTTA-------CA------------------------------------TAGGTTAATTGTAATATTTTAAAGTATTTTATTCATTAGGATTACTAGTCAAGCCATGTCCGTCTGTCCGTTCGT---------------------------CCGCCTGTCC-----GTATGAACGCCCT--------TTT--ACTCCCTTAAGCTGAGTAAGGGGTATCTGATAGTCGAG----GCACTCGCCTATAGC-GTTGTTTCTTGTC--TATA-TT----------------------------------------------------
droTak1 scf7180000415069:29112-29320 + TTTTCTTAATCAG--G--AAGACG-------------------------------TACCTTACCGGA---------------------AAAAA--A---GGTTTCATTCATGGTATATTTCATCGA---TTTTTTTTTGTAAACTGGTGTTATTAGTCGGAA---------CACCAACC---------------------------------------------------------------------------------------------------------CG---AGTACAGCGTTCGC--ACTCCCTTTAGCTGAGTGACGGGTATTAGATAGTCGGGACACGAACCCGACTATAGC-GTTCTCTCTTGTT--TATT-TT--TTTAGAGCAA---------------------------------------G
droEle1 scf7180000491238:715786-715891 + GCGCCACCACG--------------------------------------------AATATTAAGTTT------------------------------------------GCAATTTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTGAGTAAGGGGTATCTAATAGTCGGG----GAACTCGACAATATC-GCTCTTTCTTGTT--TTTT-TTTGCTAACTGC------------------------------------------
droRho1 scf7180000770953:11201-11384 + TTTAGACTTTAATATA--CATAAT-------------------------------ACT----ATTTA------------------------------------------AGAATGTATGTGTTTAG---------------------------------------------CAATAT--------------------------------------------AAGTATGTATGTTTAATAT---------------------------TCTAGTC-----AATTTATTG----CACTCAAAAACATAAACCTAAACACAGAGTAACGGGTATCTAATAGTCGAG----GCACTTGACTATAGC-GTTCTCTCTTGTT--GGTG-TTGCTTTTTTGC-----------------------------------------A
droFic1 scf7180000453811:423308-423379 + CT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATAACGGGTATCTGATAGTCGAG----GCACTCAAATATAGC-GTTCTCTCTCATT--TTTAATTAGTTCATTGC------------------------------------------
droKik1 scf7180000299421:538-595 + TTTCAAT------------------------------------------------ACTTTTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATTATGTTTTATATTATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_3895:10780-10834 - CTAT---------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TTTTATTTTTTATATTATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396714:539593-539665 + T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTAGCGGGCATAATGTAGTCGGG----AAACTCGACTATAGCCGTCCTCTCTTGTT--TTTA-TTGATTTGCATCA----------------------------------------A
dp5 Unknown_singleton_2101:549-606 + TTTCTAT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATTATTTTTTATATTATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_10989:807-861 + TCTATAT--------------------------------------------------TATTAAGTTT------------------------------------------AGAATCGATTGTTTTA----------------------------------------------TATATTTTTTTATATGATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000005855:1096-1153 + TTTCAAT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TACTATTTTTTTTGTTATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12954:474098-474194 + TTTCAATCTTTTA--A--AATTAT---------------------------A--------TAATGTT------------------------------------------AAAATTAATTTGTTTTT---------------------------------------------TAGTATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TTAATA-ATA--------------------------TATTTTGAATGCT--ACA
droMoj3 scaffold_1811:31605-31663 + CTTTCATTA-----------------------------------------------TTATTAAGTTT------------------------------------------AGAATATATTGTATTAA---------------------------------------------GTTTATTTTATTTTTTATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_3101:10873-10946 - TTTCAAT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TTTTATTTTTTTTATTATTTATTTATTTAAG------------------------------------------AATATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TTTTCATCAATAA--A--AAAAAA-------------------------------AGCATTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATTATGTTTCATATTATTTATG--------------------------------------TTTAGCATTTAGAGTGTTACACCACACCCCGCACCCCTGCCA-----GTGTGGA---AAT--------TGC--ACTTCCAGCCGCTGAGTAACGGGTATCAGATAGTCGGG----GAACTCGACTATAGC-GTTCTCTCTTGCT--TATA-TTAGTTTGCTGCAAGAGGAGTTGCTGCTGGGAGACGCGACCCGGGAATTAAATCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................T------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------T.........................................................................................................................................................................................................................................................................1916.00602120010000
..................................................................T------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2215.00504100000000
...............................................................GTTT------------------------------------------AGAATTTATTGTTTTA........................................................................................................................................................................................................................................................................................................................2015.00504100000000
..................................................................T------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATTATT...................................................................................................................................................................................................................................................................2513.00300100000002
...............................................................GTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................1912.00211000000000
...............................................................GTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2512.00201000010000
.............................................................AAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2711.00101000000000
.............................................................................................................AGAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2111.00101000000000
............................................................TAAGTTT------------------------------------------AGAATTTATTGTTTTA........................................................................................................................................................................................................................................................................................................................2311.00101000000000
...............................................................GTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------..........................................................................................................................................................................................................................................................................2111.00101000000000
..............................................................AGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2611.00101000000000
.................................................................TT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2311.00100100000000
..............................................................................................................GAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2011.00100100000000
.................................................................TT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATTA.....................................................................................................................................................................................................................................................................2411.00101000000000
.............................................................................................................AGAATTTATTGTTTTAA---------------------------------------------TATTATT...................................................................................................................................................................................................................................................................2411.00101000000000
............................................................TAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2811.00100100000000
...........................................................TTAAGTTT------------------------------------------AGAATTTATTGT............................................................................................................................................................................................................................................................................................................................2011.00100000010000
.................................................................TT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TA........................................................................................................................................................................................................................................................................2111.00101000000000
..............................................................................................................GAATTTATTGTTTTAA---------------------------------------------TATTATT...................................................................................................................................................................................................................................................................2311.00101000000000
..............................................................AGTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................2011.00100100000000
.............................................................................................................AGAATTTATTGTTTTAA---------------------------------------------TATTA.....................................................................................................................................................................................................................................................................2211.00101000000000
.............................................................................................................AGAATTTATTGTTTTAA---------------------------------------------T.........................................................................................................................................................................................................................................................................1811.00100010000000
...............................................................GTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TA........................................................................................................................................................................................................................................................................2311.00101000000000
..................................................................T------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TA........................................................................................................................................................................................................................................................................2011.00101000000000
...........................................................TTAAGTTT------------------------------------------AGAATTTATTGTTTTA........................................................................................................................................................................................................................................................................................................................2411.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................CTCGACTATAGC-GTTCTCTCTTGC..............................................................24200.8016001600000000
............................................................................................................................................................................................................................................................................................................................................................AACTCGACTATAGC-GTTCTCTCTTGC..............................................................26200.20400400000000
........................................................................................................................................................................................................................................................................................................................................TATCAGATAGTCGGG----GAACTCG...................................................................................22200.05101000000000
droEre2
TTTTTATCGATTT--G--CCAAAA-------------------------------AACATT----------------------------------A---GGAAACATTTTTAATTATTTT-TTTCA---------------------------------------------TTTTATT------------ATT------------------------------------------------------GTATTCCCAATTTCGATAGACATGCCAAAAAAATGTATA---AATATCTCGATGGC--ACTTTCATTAGCTCTGTAATGGGTATCTGAAAGTCGGG----GAACTCGGCTATAGC-GTTCTCTCTTGTT--TTTA-TTAATATTTTAC-----------------------------------------ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droSec2
TTCCAATCTTTAA--C--AAC-AT---------------------------ATAG--CATTCAGATTCTGGAGACTTTGCACGTTTGAAAAATGTTTTTGA-------------TATTTT-GTTCG------------------------------TTTAAA---------TACCATTCTTTC--CTATCCATTTAT----------------------------------------------------------------------------------GTGAGGA---AA---------------GATATAGATGATGAGTGACGGGTAACAGATAGTCGAG----GAACTCGGCTATAGT-GTTTTCTCTTGTT--TTTA-------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droSim2
GTAGCGTG---------C--AAAAAGCGTAGATTTTTGAAAACGATTATGA----ATTGTTGGTTTT------------------------------------------TAAGCTTAATGTTTTTA---------------------------------------------ATTTTATT-----------ATT------------------------------------------------------TTTATGACAATCTCCATCGGTTTGCCAAAGTTATGTTGA---AATTTCCGGTTAAT--ACTCCCAGTAGCTAATTAACAAGTATCTGTTAGTCGAG----GAAGTCGCCTATAGC-ATTTTCTCTTGTT--TTTG-CTCAATAAGA---------GGTGCTTTT-------------------------GSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................TA---------------------------------------------ATTTTATT-----------ATT------------------------------------------------------TTTAT.........................................................................................................................................................................................1850.60300003000000000000
......................................................................................................................................................................................................................................................................................................................CAGTAGCTAATTAACAC..............................................................................................................1720.50100000000001000000
.......................................................................................................................................................................................................................................................................................................................AGTAGCTAATTAACAC..............................................................................................................1660.17100000000001000000
......................................................................................................................................................................................................................................................................................................................................AGTATCTGTTAGTCGAT----C.........................................................................................18160.06100001000000000000
dm3
TATACTTATATTA--TATAAAAAA-------------------------------AGC-------------------------------------AAATGAT---------TTTTTTTAGTTTTATTTTTATTTTTTTGC-------------------------------AAGTACACTTTCTATTT-------------------------CGCTTTGTCACTATGTAAA-----------------------------------------------TCATACA---TTGCTTACGTTCGC--ATTTTCACCAGCTGAGTAAGAGGTATCTGATAGTCGAG----GAACTCGACTTCAAC-GATCA-TCTTGTTTATTTA-TTAATTGACT--------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................GGTATCTGATAGTCGAG----GAAC......................................................................................21201.202400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012400000000000000000000000000000000000000000000000000000000000000000000000020000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGAG----GAACTC....................................................................................21201.152300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001600000000000000000000200000000000000010100000000000000000000000000000000000000000000000000000020000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CAGCTGAGTAAGAGGTATCTGATAG...................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGAG----GAACTCGA..................................................................................23160.5080000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001100000000000000000000000000000000000000000000000000000000000000000000000010000000000110000000000000100000
.......................................................................................................................................................................................................................................................................................................................................GTATCTGATAGTCGAG----GAAC......................................................................................20200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGAG----GAACTCGAC.................................................................................24140.2130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TCTGATAGTCGAG----GAACTCGA..................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................GTAAGAGGTATCTGATAGTCG................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGATAGTCGAG----GAACTCGACT................................................................................21170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGAG----GAACTCGACA................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GTATCTGATAGTCGAG----GAACT.....................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGAG----GAACTCG...................................................................................22170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CTGATAGTCGAG----GAACTCGAC.................................................................................21170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGAG----GAACT.....................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TCTGATAGTCGAG----GAACT.....................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGATAGTCGAG----GAACTCG...................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TTAGTTTTATTTTTATTTTTGC...........................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................GGTATCTGATAGTCGAG----GAA.......................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATCTGATAGTCGAG----GAACTCA...................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGAG----GAACTA....................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TCTGATAGTCGAG----GAACTCG...................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droEug1
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAACGGGTATCTTATAGTCGCG----GCACTCGACTATAGC-GTTTCCTCTTGTT--TTTAACTAGATAACTCCCTGGG----TGTGACTCGACGACGCGACCCAGTAGCT----ASizeHit CountTotal NormTotal
No Reads
droBia1
AAAGAAAT---------C--AAA--------------------------------AATTCTGAATAT------------------------------------------AGCATTTA-------CA------------------------------------TAGGTTAATTGTAATATTTTAAAGTATTTTATTCATTAGGATTACTAGTCAAGCCATGTCCGTCTGTCCGTTCGT---------------------------CCGCCTGTCC-----GTATGAACGCCCT--------TTT--ACTCCCTTAAGCTGAGTAAGGGGTATCTGATAGTCGAG----GCACTCGCCTATAGC-GTTGTTTCTTGTC--TATA-TT----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTTTCTTAATCAG--G--AAGACG-------------------------------TACCTTACCGGA---------------------AAAAA--A---GGTTTCATTCATGGTATATTTCATCGA---TTTTTTTTTGTAAACTGGTGTTATTAGTCGGAA---------CACCAACC---------------------------------------------------------------------------------------------------------CG---AGTACAGCGTTCGC--ACTCCCTTTAGCTGAGTGACGGGTATTAGATAGTCGGGACACGAACCCGACTATAGC-GTTCTCTCTTGTT--TATT-TT--TTTAGAGCAA---------------------------------------GSizeHit CountTotal NormTotal
No Reads
droEle1
GCGCCACCACG--------------------------------------------AATATTAAGTTT------------------------------------------GCAATTTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTGAGTAAGGGGTATCTAATAGTCGGG----GAACTCGACAATATC-GCTCTTTCTTGTT--TTTT-TTTGCTAACTGC------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTTAGACTTTAATATA--CATAAT-------------------------------ACT----ATTTA------------------------------------------AGAATGTATGTGTTTAG---------------------------------------------CAATAT--------------------------------------------AAGTATGTATGTTTAATAT---------------------------TCTAGTC-----AATTTATTG----CACTCAAAAACATAAACCTAAACACAGAGTAACGGGTATCTAATAGTCGAG----GCACTTGACTATAGC-GTTCTCTCTTGTT--GGTG-TTGCTTTTTTGC-----------------------------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
CT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATAACGGGTATCTGATAGTCGAG----GCACTCAAATATAGC-GTTCTCTCTCATT--TTTAATTAGTTCATTGC------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTTCAAT------------------------------------------------ACTTTTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATTATGTTTTATATTATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CTAT---------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TTTTATTTTTTATATTATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................AAGTTT------------------------------------------AGAATTTATTGT............................................................................................................................................................................................................................................................................................................................1821.002010001
..................................................................T------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TTT.......................................................................................................................................................................................................................................................................2121.002000002
...............................................................GTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................1921.002020000
............................................................TAAGTTT------------------------------------------AGAATTTATTGTTT..........................................................................................................................................................................................................................................................................................................................2121.002010001
............................................................TAAGTTT------------------------------------------AGAATTTATTGTTTTA........................................................................................................................................................................................................................................................................................................................2320.501000001
.................................................................TT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TA........................................................................................................................................................................................................................................................................2120.501100000
.............................................................................................................AGAATTTATTGTTTTAA---------------------------------------------TTTTATT...................................................................................................................................................................................................................................................................2420.501000001
................................................................................................................ATTTATTGTTTTAA---------------------------------------------TTTTATTTT.................................................................................................................................................................................................................................................................2320.501010000
..........................................................ATTAAGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................2220.501010000
....................................................................................................................ATTGTTTTAA---------------------------------------------TTTTATTTTTTAT.............................................................................................................................................................................................................................................................2320.501010000
...........................................................TTAAGTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................2320.501010000
.............................................................AAGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................1920.501000001
.........................................................TATTAAGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................2320.501010000
...............................................................................................................AATTTATTGTTTTAA---------------------------------------------TTTTATTTTTTACC............................................................................................................................................................................................................................................................2920.501010000
.............................................................AAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TTTTA.....................................................................................................................................................................................................................................................................2820.501010000
................................................................................................................ATTTATTGTTTTAA---------------------------------------------TTTTATT...................................................................................................................................................................................................................................................................2120.501010000
..............................................................AGTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................2020.501010000
...T---------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGTTTTA........................................................................................................................................................................................................................................................................................................................2920.501100000
..AT---------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGC............................................................................................................................................................................................................................................................................................................................2620.501010000
..............................................................AGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................1820.501000100
..AT---------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATT..............................................................................................................................................................................................................................................................................................................................2420.501010000
................................................................................................................ATTTATTGTTTTAA---------------------------------------------TTTTATTT..................................................................................................................................................................................................................................................................2220.501010000
...............................................................GTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TT........................................................................................................................................................................................................................................................................2320.501010000
..AT---------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................2920.501100000
...........................................................TTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------T.........................................................................................................................................................................................................................................................................2620.501000001
..................................................................T------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TT........................................................................................................................................................................................................................................................................2020.501010000
..AT---------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................2720.501001000
.................................................................................................................TTTATTGTTTTAA---------------------------------------------TTTTATTTTTTATAT...........................................................................................................................................................................................................................................................2820.501000001
.........................................................TATTAAGTTT------------------------------------------AGAATTTATT..............................................................................................................................................................................................................................................................................................................................2020.501010000
..AT---------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATC..............................................................................................................................................................................................................................................................................................................................2420.501010000
....................................................................................................................ATTGTTTTAA---------------------------------------------TTTTATTTTTTATATT..........................................................................................................................................................................................................................................................2620.501000001
.............................................................AAGTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................2120.501000001
.................................................................................................................TTTATTGTTTTAA---------------------------------------------TTTTATT...................................................................................................................................................................................................................................................................2020.501010000
.............................................................AAGTTT------------------------------------------AGAATTTATTGTTC..........................................................................................................................................................................................................................................................................................................................2020.501010000
................................................................TTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TTTT......................................................................................................................................................................................................................................................................2420.501010000
............................................................TAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TTT.......................................................................................................................................................................................................................................................................2720.501100000
..AT---------------------------------------------------ATTATTAAGTTT------------------------------------------AGAAT...................................................................................................................................................................................................................................................................................................................................1920.501000010
..............................................................................................................GAATTTATTGTTTTAA---------------------------------------------TTTTACCC..................................................................................................................................................................................................................................................................2430.331010000
............................................................TAAGTTT------------------------------------------AGAATTTATTGTTACC........................................................................................................................................................................................................................................................................................................................2330.331010000
.......................................................................................................................GTTTTAA---------------------------------------------TTTTATTTTTTA..............................................................................................................................................................................................................................................................1960.171010000
droBip1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTAGCGGGCATAATGTAGTCGGG----AAACTCGACTATAGCCGTCCTCTCTTGTT--TTTA-TTGATTTGCATCA----------------------------------------ASizeHit CountTotal NormTotal
No Reads
dp5
TTTCTAT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATTATTTTTTATATTATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................GTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................1913.0030300000000
............................................................TAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2812.0020200000000
...........................................................TTAAGTTT------------------------------------------AGAATTTATT..............................................................................................................................................................................................................................................................................................................................1811.0010100000000
................................................................TTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2411.0010001000000
.................................................................TT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------C.........................................................................................................................................................................................................................................................................2011.0010001000000
...............................................................GTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------T.........................................................................................................................................................................................................................................................................2211.0010100000000
.........................................................TATTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TA........................................................................................................................................................................................................................................................................2911.0010100000000
.............................................................AAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------T.........................................................................................................................................................................................................................................................................2411.0010001000000
........................................................TTATTAAGTTT------------------------------------------AGAATTTATT..............................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....AT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATT..............................................................................................................................................................................................................................................................................................................................2411.0010000100000
..............................................................AGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TA........................................................................................................................................................................................................................................................................2411.0010100000000
..............................................................AGTTT------------------------------------------AGAATTTATTGTTT..........................................................................................................................................................................................................................................................................................................................1911.0010100000000
.................................................................TT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2311.0010100000000
................................................................TTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------T.........................................................................................................................................................................................................................................................................2111.0010010000000
.......................................................ATTATTAAGTTT------------------------------------------AGAATTTATT..............................................................................................................................................................................................................................................................................................................................2211.0010000010000
..............................................................AGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................1811.0010000100000
...............................................................GTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATTATT...................................................................................................................................................................................................................................................................2811.0010100000000
.................................................................TT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TAT.......................................................................................................................................................................................................................................................................2211.0010100000000
...............................................................GTTT------------------------------------------AGAATTTATTGTTTTA........................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................................................TT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------T.........................................................................................................................................................................................................................................................................2011.0010001000000
.............................................................AAGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................1911.0010000010000
.........................................................TATTAAGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................2311.0010100000000
...........................................................TTAAGTTT------------------------------------------AGAATTTATTGTTT..........................................................................................................................................................................................................................................................................................................................2211.0010010000000
.....AT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................2911.0010100000000
..............................................................AGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2611.0010100000000
..............................................................AGTTT------------------------------------------AGAATTTATTGTTTC.........................................................................................................................................................................................................................................................................................................................2011.0010010000000
.....AT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAAT...................................................................................................................................................................................................................................................................................................................................1920.5010010000000
...CTAT------------------------------------------------ATTATTAAGTTT------------------------------------------AGA.....................................................................................................................................................................................................................................................................................................................................1920.5010010000000
.............................................................................................................AGAATTTATTGTTTTAA---------------------------------------------TA........................................................................................................................................................................................................................................................................1920.5010100000000
..................................................................T------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------T.........................................................................................................................................................................................................................................................................1920.5010100000000
..................................................................T------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2220.5010001000000
..................................................................T------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TA........................................................................................................................................................................................................................................................................2020.5010100000000
..............................................................................................................GAATTTATTGTTTTAA---------------------------------------------TAT.......................................................................................................................................................................................................................................................................1930.3310000100000
..............................................................................................................GAATTTATTGTTTTAA---------------------------------------------TATT......................................................................................................................................................................................................................................................................2030.3310100000000
..................................................................T------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------C.........................................................................................................................................................................................................................................................................1930.3310010000000
droPer2
TCTATAT--------------------------------------------------TATTAAGTTT------------------------------------------AGAATCGATTGTTTTA----------------------------------------------TATATTTTTTTATATGATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TTTCAAT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TACTATTTTTTTTGTTATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................T------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------T.........................................................................................................................................................................................................................................................................1941.75703040
..............................................................AGTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................2041.50600060
..............................................................AGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................1841.25500050
...............................................................GTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................1941.00401030
.......................................................ATTATTAAGTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................2730.67200020
.......................................................ATTATTAAGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................2530.67200020
............................................................TAAGTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................2230.67200020
.......................................................ATTATTAAGTTT------------------------------------------AGAATTTATTGTTTTA........................................................................................................................................................................................................................................................................................................................2830.67200020
.............................................................AAGTTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................2140.50200110
...............................................................GTTT------------------------------------------AGAATTTATTGTTTTA........................................................................................................................................................................................................................................................................................................................2040.50200020
................................................................TTT------------------------------------------AGAATTTATTGTTTT.........................................................................................................................................................................................................................................................................................................................1850.40200020
......T------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATT..................................................................................................................................................................................................................................................................................................................................1930.33100010
......T------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGT............................................................................................................................................................................................................................................................................................................................2530.33100010
.......................................................ATTATTAAGTTT------------------------------------------AGAATTTATTGTTT..........................................................................................................................................................................................................................................................................................................................2630.33100010
.TTCAAT------------------------------------------------ATTATTAAGTTT------------------------------------------AGA.....................................................................................................................................................................................................................................................................................................................................2130.33101000
...........................................................TTAAGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................2130.33100010
.TTCAAT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAAT...................................................................................................................................................................................................................................................................................................................................2330.33100010
...........................................................TTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------T.........................................................................................................................................................................................................................................................................2630.33100010
...........................................................TTAAGTTT------------------------------------------AGAATTTATTGTC...........................................................................................................................................................................................................................................................................................................................2130.33100001
.......................................................ATTATTAAGTTT------------------------------------------AGAATTTATTGT............................................................................................................................................................................................................................................................................................................................2430.33100010
..........................................................ATTAAGTTT------------------------------------------AGAATTTATTGTTTTA........................................................................................................................................................................................................................................................................................................................2530.33100010
............................................................TAAGTTT------------------------------------------AGAATTTATTGTTTTA........................................................................................................................................................................................................................................................................................................................2330.33100010
........................................................TTATTAAGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................2430.33100010
......T------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATT..............................................................................................................................................................................................................................................................................................................................2330.33100010
.....AT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGT............................................................................................................................................................................................................................................................................................................................2630.33100010
.TTCAAT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATT..................................................................................................................................................................................................................................................................................................................................2430.33100010
..........................................................ATTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------T.........................................................................................................................................................................................................................................................................2730.33100010
..........................................................ATTAAGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................2230.33100010
.TTCAAT------------------------------------------------ATTATTAAGTTT------------------------------------------A.......................................................................................................................................................................................................................................................................................................................................1930.33100010
.......................................................ATTATTAAGTTT------------------------------------------AGAATTTATT..............................................................................................................................................................................................................................................................................................................................2230.33100010
..........................................................ATTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------..........................................................................................................................................................................................................................................................................2630.33100010
...CAAT------------------------------------------------ATTATTAAGTTT------------------------------------------AGA.....................................................................................................................................................................................................................................................................................................................................1930.33100010
.............................................................................................................AGAATTTATTGTTTTAA---------------------------------------------TA........................................................................................................................................................................................................................................................................1940.25100010
..............................................................AGTTT------------------------------------------AGAATTTATTGTTTTA........................................................................................................................................................................................................................................................................................................................2140.25100010
................................................................TTT------------------------------------------AGAATTTATTGTTTTA........................................................................................................................................................................................................................................................................................................................1940.25101000
.............................................................AAGTTT------------------------------------------AGAATTTATTGTTT..........................................................................................................................................................................................................................................................................................................................2040.25100001
.............................................................AAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------..........................................................................................................................................................................................................................................................................2340.25101000
.....AT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAA....................................................................................................................................................................................................................................................................................................................................1840.25100010
.............................................................AAGTTT------------------------------------------AGAATTTATTGTT...........................................................................................................................................................................................................................................................................................................................1940.25100010
...............................................................GTTT------------------------------------------AGAATTTATTGTTT..........................................................................................................................................................................................................................................................................................................................1840.25100010
.............................................................AAGTTT------------------------------------------AGAATTTATTGTTTTA........................................................................................................................................................................................................................................................................................................................2240.25101000
.............................................................AAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TA........................................................................................................................................................................................................................................................................2540.25101000
...............................................................GTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TA........................................................................................................................................................................................................................................................................2340.25101000
....AAT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAA....................................................................................................................................................................................................................................................................................................................................1940.25100010
.............................................................................................................AGAATTTATTGTTTTAA---------------------------------------------T.........................................................................................................................................................................................................................................................................1840.25100010
droVir3
TTTCAATCTTTTA--A--AATTAT---------------------------A--------TAATGTT------------------------------------------AAAATTAATTTGTTTTT---------------------------------------------TAGTATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TTAATA-ATA--------------------------TATTTTGAATGCT--ACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................ATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TTA...................................................2660.503002000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................TGTTTTT---------------------------------------------TAGTATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCT...................................................................2420.501000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TACCTCTTTGT--TTTA-TTAA..................................................1970.433000000000000000000000000000011000010000000000000000000000000000
....................................................................................................................................................................................TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TTA...................................................2170.433000000000000001000000000000020000000000000000000000000000000000
...........................................................................................................................................................................TAGTATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGA--...........................................................2360.171000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................ATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--...........................................................1960.171001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................ATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--T..........................................................2060.171001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................ATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-......................................................2360.171000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-......................................................2460.171000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................ATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TT.........................................................2160.171000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TTA...................................................2760.171000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................TAGTATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--...........................................................2360.171000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................T---------------------------------------------TAGTATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TT.........................................................2660.171000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TACCTCTTTGT--TTTA-TTAATA-A..............................................2270.141000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TTAATA-ATA--------------------------TA................2870.141001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TTA...................................................2570.141001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................ACCTCTTTGT--TTTA-TTAATA-...............................................2070.141001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--T..........................................................1970.141000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................TTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-A.....................................................2270.141000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TTAATA-A..............................................2470.141000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TTAATA-A..............................................2570.141000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................TTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TTAAT.................................................2670.141000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CCTCTTTGT--TTTA-TTAATA-ATA--------------------------TA................2470.141000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TACCTCTTTGT--TTTA-TTAATA-...............................................2170.141000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................TTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TT....................................................2270.141000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CTCTTTGT--TTTA-TTAATA-ATA--------------------------TAAA..............2570.141000000000000000000000000000000001000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TACCTCTTTGT--TTTA-TTAATA-ATA--------------------------TATT..............2870.141000000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TACCTCTTTGT--TTTA-TTAATA-ATA--------------------------TA................2670.141000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CTCTTTGT--TTTA-TTAATA-ATA--------------------------T.................2270.141000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................TTT---------------------------------------------TAGTATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACC....................................................................1970.141001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TT....................................................2170.141000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................TTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TTAATA-...............................................2570.141000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTTT---------------------------------------------TAGTATTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACC....................................................................2070.141001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TC....................................................2270.141000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TTAATA-...............................................2770.141001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TACCTCTTTGT--TTTA-TTAAA.................................................2080.131000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTTA-TTAATA-ATA--------------------------TATTTTGA..........2180.131000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-TTA...................................................2080.131001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTA-TTAATA-ATA--------------------------TATTTTGAAT........2280.131001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCTTTGT--TTTA-AA....................................................20110.091000000000000000000000000000000010000000000000000000000000000000
droMoj3
CTTTCATTA-----------------------------------------------TTATTAAGTTT------------------------------------------AGAATATATTGTATTAA---------------------------------------------GTTTATTTTATTTTTTATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................GTTTATTTTATTTTTTATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2260.171100000
............................................................................................................................AA---------------------------------------------GTTTATTTTATTTTTTATT.......................................................................................................................................................................................................................................................2160.171100000
.........................................................................................................................ATTAA---------------------------------------------GTTTATTTTATTTT............................................................................................................................................................................................................................................................1960.171100000
.......................................................................................................................GTATTAA---------------------------------------------GTTTATTTTATTTTT...........................................................................................................................................................................................................................................................2260.171100000
...................................................................................................................TATTGTATTAA---------------------------------------------GTTTATTTTA................................................................................................................................................................................................................................................................2160.171100000
.......................................................................................................................GTATTAA---------------------------------------------GTTTATTTTATTTTTTATT.......................................................................................................................................................................................................................................................2660.171100000
droGri2
TTTCAAT------------------------------------------------ATTATTAAGTTT------------------------------------------AGAATTTATTGTTTTAA---------------------------------------------TTTTATTTTTTTTATTATTTATTTATTTAAG------------------------------------------AATATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/17/2015 at 11:53 PM