ID:

dya_966

 Coordinate:

3R:7403780-7403930 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.9 -5.6 -5.6 -5.5

Flybase annnotation

exon [dyak_GLEANR_8556:2]; CDS [Dyak\GE24902-cds]; intron [Dyak\GE24902-in]

Repeatable elements

NameClassFamilyStrand
Gypsy15-I_Dya-intLTRGypsy-
mature
  1. 3L:9933577-9933601 +
  2. dya_966  3R:7403873-7403897 -
star
  1. 3L:9933629-9933647 +
  2. dya_966  3R:7403827-7403845 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGTTTTAAGTTTATTTGACACAGGAAGTCCAGTAAGCTTTATTCAAAAATCTTTAGTTCCAAATAATGTTAAATTAAAATCTCAAAGAAGTAAATACCATGGAATAGGTGGACAACAAATATTAATTTTTGCAAAAATTGAATGCAGTGTATATTTTCATAAAAANNNNNNNNNNTTCAAGCCGTTCGTTTTGCCCCAAAGCCGAGGATCTCGCCTCTCACCCAAGTGCAGGCGGATGCAGACTTGACGTT
***********************************************************************************......((...(((..((..............((((........)))).............))..))).))************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V120
male body		 M043
female body
 V058
head
 GSM1528802
follicle cells		 M056
embryo
 M026
head
 V046
embryo
 V052
head
................GACACAGGAAGTCCAGTAAGCT..................................................................................................................................................................................................................... 22 0 4 10.25 41 35 6 0 0 0 0 0 0
..................CACAGGAAGTCCAGTAAGCT..................................................................................................................................................................................................................... 20 0 4 9.25 37 33 3 0 0 1 0 0 0
...................................................................................AAAGAAGTAAATACCATGGAATAGG............................................................................................................................................... 25 0 2 7.00 14 3 9 0 0 1 0 1 0
...................................................................................AAAGAAGTAAATACCATGGAATA................................................................................................................................................. 23 0 2 5.00 10 0 0 0 10 0 0 0 0
..................CACAGGAAGTCCAGTAAGCTT.................................................................................................................................................................................................................... 21 0 4 4.75 19 18 1 0 0 0 0 0 0
.........................................................................................GTAAATACCATGGAATAGGT.............................................................................................................................................. 20 0 2 4.50 9 6 3 0 0 0 0 0 0
.......................................................................................................................................AATTGAATGCAGTGTATAT................................................................................................. 19 0 2 4.50 9 4 5 0 0 0 0 0 0
.............TTTGACACAGGAAGTCCAGTAAGCT..................................................................................................................................................................................................................... 25 0 4 4.25 17 14 3 0 0 0 0 0 0
..................CACAGGAAGTCCAGTAAGC...................................................................................................................................................................................................................... 19 0 4 3.25 13 12 0 0 0 0 0 0 1
...................................................................................AAAGAAGTAAATACCATGGAATAGGT.............................................................................................................................................. 26 0 2 3.00 6 0 6 0 0 0 0 0 0
...........................................................................................................................AATTTTTGCAAAAATTGAATGCAGT....................................................................................................... 25 0 2 3.00 6 6 0 0 0 0 0 0 0
...................................................................................AAAGAAGTAAATACCATGGAATAGGTG............................................................................................................................................. 27 0 2 3.00 6 0 6 0 0 0 0 0 0
.................ACACAGGAAGTCCAGTAAGCT..................................................................................................................................................................................................................... 21 0 4 2.75 11 10 0 0 0 0 0 1 0
.................................................................................................CATGGAATAGGTGGACAACA...................................................................................................................................... 20 0 2 2.50 5 4 1 0 0 0 0 0 0
........................................................................................AGTAAATACCATGGAATAGGT.............................................................................................................................................. 21 0 2 2.50 5 3 1 1 0 0 0 0 0
.................ACACAGGAAGTCCAGTAAGC...................................................................................................................................................................................................................... 20 0 4 2.50 10 9 1 0 0 0 0 0 0
............ATTTGACACAGGAAGTCCAGT.......................................................................................................................................................................................................................... 21 0 4 2.50 10 10 0 0 0 0 0 0 0
...........................................................................................AAATACCATGGAATAGGT.............................................................................................................................................. 18 0 2 2.50 5 1 2 2 0 0 0 0 0
...................ACAGGAAGTCCAGTAAGCTT.................................................................................................................................................................................................................... 20 0 4 2.25 9 8 0 1 0 0 0 0 0
............ATTTGACACAGGAAGTCCAGTAAGC...................................................................................................................................................................................................................... 25 0 4 2.25 9 8 0 1 0 0 0 0 0
.................ACACAGGAAGTCCAGTAAGCTT.................................................................................................................................................................................................................... 22 0 4 2.25 9 8 1 0 0 0 0 0 0
...................ACAGGAAGTCCAGTAAGCT..................................................................................................................................................................................................................... 19 0 4 2.25 9 5 4 0 0 0 0 0 0
.............TTTGACACAGGAAGTCCAGTAAGC...................................................................................................................................................................................................................... 24 0 4 2.25 9 8 0 1 0 0 0 0 0
..................................................................................CAAAGAAGTAAATACCATGGAATAGGT.............................................................................................................................................. 27 0 2 2.00 4 1 3 0 0 0 0 0 0
........................................................................................................................................ATTGAATGCAGTGTATATTTT.............................................................................................. 21 0 2 2.00 4 3 1 0 0 0 0 0 0
................GACACAGGAAGTCCAGTAAGC...................................................................................................................................................................................................................... 21 0 4 2.00 8 4 2 0 0 0 0 2 0
...........................................................................................................................AATTTTTGCAAAAATTGAATGCAGTGT..................................................................................................... 27 0 2 2.00 4 4 0 0 0 0 0 0 0
...........TATTTGACACAGGAAGTCCAGT.......................................................................................................................................................................................................................... 22 0 4 1.75 7 5 2 0 0 0 0 0 0
................................................................................CTCAAAGAAGTAAATACCATGGAAT.................................................................................................................................................. 25 0 2 1.50 3 2 1 0 0 0 0 0 0
............................................................................................................................ATTTTTGCAAAAATTGAATGCAGT....................................................................................................... 24 0 2 1.50 3 2 1 0 0 0 0 0 0
.............................................................................................ATACCATGGAATAGGTGGAC.......................................................................................................................................... 20 0 2 1.50 3 2 1 0 0 0 0 0 0
...............TGACACAGGAAGTCCAGTAAGCT..................................................................................................................................................................................................................... 23 0 4 1.50 6 6 0 0 0 0 0 0 0
....................................................TTAGTTCCAAATAATGTTA.................................................................................................................................................................................... 19 0 2 1.50 3 0 3 0 0 0 0 0 0
......................................................................................GAAGTAAATACCATGGAATAGGT.............................................................................................................................................. 23 0 2 1.50 3 3 0 0 0 0 0 0 0
..................................................................................................................................GCAAAAATTGAATGCAGTGT..................................................................................................... 20 0 2 1.50 3 3 0 0 0 0 0 0 0
............................................................................................................................ATTTTTGCAAAAATTGAATGCA......................................................................................................... 22 0 2 1.50 3 0 3 0 0 0 0 0 0
.............................................................................................ATACCATGGAATAGGTGGA........................................................................................................................................... 19 0 2 1.50 3 3 0 0 0 0 0 0 0
........................................................................................................................................ATTGAATGCAGTGTATATTT............................................................................................... 20 0 2 1.50 3 2 0 1 0 0 0 0 0
..........................................................................................TAAATACCATGGAATAGGTGGACAACA...................................................................................................................................... 27 0 2 1.50 3 0 1 1 0 1 0 0 0
.............TTTGACACAGGAAGTCCAGT.......................................................................................................................................................................................................................... 20 0 4 1.50 6 4 2 0 0 0 0 0 0
.........................................................................................................................................TTGAATGCAGTGTATATTTTC............................................................................................. 21 0 2 1.50 3 3 0 0 0 0 0 0 0
.............................................................................................................................................ATGCAGTGTATATTTTCATAAAA....................................................................................... 23 0 2 1.50 3 1 2 0 0 0 0 0 0
................GACACAGGAAGTCCAGTAAGCTT.................................................................................................................................................................................................................... 23 0 4 1.50 6 3 2 1 0 0 0 0 0
...................................................TTTAGTTCCAAATAATGTTAAATT................................................................................................................................................................................ 24 0 2 1.50 3 0 1 0 0 2 0 0 0
...............TGACACAGGAAGTCCAGTAAGC...................................................................................................................................................................................................................... 22 0 4 1.25 5 5 0 0 0 0 0 0 0
.............TTTGACACAGGAAGTCCAGTAAGCTT.................................................................................................................................................................................................................... 26 0 4 1.25 5 5 0 0 0 0 0 0 0
.......................................................................................................................................AATTGAATGCAGTGTATATTTT.............................................................................................. 22 0 2 1.00 2 2 0 0 0 0 0 0 0
................................................................................CTCAAAGAAGTAAATACCATG...................................................................................................................................................... 21 0 2 1.00 2 1 1 0 0 0 0 0 0
........................................................................................................................................ATTGAATGCAGTGTATATTTTCATAAAA....................................................................................... 28 0 2 1.00 2 2 0 0 0 0 0 0 0
......................................................................................GAAGTAAATACCATGGAATAGGTGGA........................................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0 0 0 0
.......................................................................................................ATAGGTGGACAACAAATATTAAT............................................................................................................................. 23 0 2 1.00 2 0 2 0 0 0 0 0 0
.........................................................................................GTAAATACCATGGAATAGGTGGACAACA...................................................................................................................................... 28 0 2 1.00 2 0 1 0 0 1 0 0 0
................................................................................CTCAAAGAAGTAAATACCATGGAATAG................................................................................................................................................ 27 0 2 1.00 2 1 1 0 0 0 0 0 0
......................................................................AAATTAAAATCTCAAAGAA.................................................................................................................................................................. 19 0 2 1.00 2 0 2 0 0 0 0 0 0
.........................................................................................GTAAATACCATGGAATAGGTGGA........................................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0 0 0 0
........................................................................................................................................ATTGAATGCAGTGTATATTTTCATAAA........................................................................................ 27 0 2 1.00 2 2 0 0 0 0 0 0 0
.......................................................................................................................................AATTGAATGCAGTGTATATTTTCAT........................................................................................... 25 0 2 1.00 2 2 0 0 0 0 0 0 0
........................................................................................................................................ATTGAATGCAGTGTATATTTTC............................................................................................. 22 0 2 1.00 2 2 0 0 0 0 0 0 0
...........................................................................................AAATACCATGGAATAGGTGG............................................................................................................................................ 20 0 2 1.00 2 1 1 0 0 0 0 0 0
............................................................................................AATACCATGGAATAGGTGGA........................................................................................................................................... 20 0 2 1.00 2 0 2 0 0 0 0 0 0
............................................................................................AATACCATGGAATAGGTGGACA......................................................................................................................................... 22 0 2 1.00 2 2 0 0 0 0 0 0 0
.......................................................................................................................................AATTGAATGCAGTGTATATT................................................................................................ 20 0 2 1.00 2 2 0 0 0 0 0 0 0
........................................................................................................................................ATTGAATGCAGTGTATATT................................................................................................ 19 0 2 1.00 2 1 1 0 0 0 0 0 0
.................................................................................TCAAAGAAGTAAATACCATGGAATAGG............................................................................................................................................... 27 0 2 1.00 2 0 2 0 0 0 0 0 0
......................................................................................................................................AAATTGAATGCAGTGTATAT................................................................................................. 20 0 2 1.00 2 2 0 0 0 0 0 0 0
.........................................................................................................AGGTGGACAACAAATATTAATT............................................................................................................................ 22 0 2 1.00 2 0 2 0 0 0 0 0 0
.........................................................................................GTAAATACCATGGAATAGGTGGAC.......................................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0 0 0 0
................................................................................CTCAAAGAAGTAAATACCATGGAATAGGT.............................................................................................................................................. 29 0 2 1.00 2 2 0 0 0 0 0 0 0
.......................................................................................AAGTAAATACCATGGAATAGGT.............................................................................................................................................. 22 0 2 1.00 2 1 1 0 0 0 0 0 0
...................................................................GTTAAATTAAAATCTCAAAGAAGTAAA............................................................................................................................................................. 27 0 2 1.00 2 0 2 0 0 0 0 0 0
........................................................................................................................ATTAATTTTTGCAAAAATTGAATGCAGT....................................................................................................... 28 0 2 1.00 2 2 0 0 0 0 0 0 0
..................................................................................................ATGGAATAGGTGGACAACA...................................................................................................................................... 19 0 2 1.00 2 2 0 0 0 0 0 0 0
.......................................................................................................................................AATTGAATGCAGTGTATATTTTC............................................................................................. 23 0 2 1.00 2 2 0 0 0 0 0 0 0
.GTTTTAAGTTTATTTGAC........................................................................................................................................................................................................................................ 18 0 6 0.83 5 0 0 0 0 0 5 0 0
.................ACACAGGAAGTCCAGTAAG....................................................................................................................................................................................................................... 19 0 4 0.75 3 2 0 1 0 0 0 0 0
........GTTTATTTGACACAGGAAGTCCAGTAA........................................................................................................................................................................................................................ 27 0 4 0.75 3 3 0 0 0 0 0 0 0
...............TGACACAGGAAGTCCAGTAAGCTTT................................................................................................................................................................................................................... 25 0 4 0.75 3 0 3 0 0 0 0 0 0
..............TTGACACAGGAAGTCCAGTAAGC...................................................................................................................................................................................................................... 23 0 4 0.75 3 2 1 0 0 0 0 0 0
...............TGACACAGGAAGTCCAGTAAGCTT.................................................................................................................................................................................................................... 24 0 4 0.75 3 3 0 0 0 0 0 0 0
..............TTGACACAGGAAGTCCAGTAAGCTT.................................................................................................................................................................................................................... 25 0 4 0.75 3 3 0 0 0 0 0 0 0
...................ACAGGAAGTCCAGTAAGCTTTA.................................................................................................................................................................................................................. 22 0 4 0.75 3 2 0 1 0 0 0 0 0
..................CACAGGAAGTCCAGTAAGCTTTATT................................................................................................................................................................................................................ 25 0 4 0.75 3 2 0 0 0 1 0 0 0
...............................................................................................................................TTTGCAAAAATTGAATGCAGTGT..................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
................................................................................................CCATGGAATAGGTGGACA......................................................................................................................................... 18 0 2 0.50 1 0 0 1 0 0 0 0 0
.................................................................................TCAAAGAAGTAAATACCATGGAATA................................................................................................................................................. 25 0 2 0.50 1 0 0 0 1 0 0 0 0
.......................................................................................AAGTAAATACCATGGAATAGGTGGAC.......................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0
.................................................TCTTTAGTTCCAAATAATGTTAAA.................................................................................................................................................................................. 24 0 2 0.50 1 0 1 0 0 0 0 0 0
...............TGACACAGGAAGTCCAGTAAGCTTTATT................................................................................................................................................................................................................ 28 0 4 0.50 2 2 0 0 0 0 0 0 0
..............................................................................................................................TTTTGCAAAAATTGAATGCAGT....................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0
...................................................TTTAGTTCTAAATAATGTTAAATT................................................................................................................................................................................ 24 1 2 0.50 1 0 1 0 0 0 0 0 0
..................CACAGGAAGTCCAGTAAGCTTTATTCAAAA........................................................................................................................................................................................................... 30 0 4 0.50 2 2 0 0 0 0 0 0 0
...........................................................................................AAATACCATGGACTAGGTGGACAAC....................................................................................................................................... 25 1 2 0.50 1 0 0 1 0 0 0 0 0
........................................................................................................................................ATTGAATGCAGTGTATATTTTCAT........................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................................................ATTTTTGCAAAAATTGAATGCAGTGT..................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................................TGGACAACAAATATTAATTTTTGCAAA.................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0 0 0 0
..........................................................................................TAAATACCATGGAATAGG............................................................................................................................................... 18 0 2 0.50 1 0 0 1 0 0 0 0 0
....................................................................................................................................AAAAATTGAATGCAGTGTAT................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................................................AATTTTTGCAAAAATTGAATGCA......................................................................................................... 23 0 2 0.50 1 0 1 0 0 0 0 0 0
................................................................................................................................TTGCAAAAATTGAATGCAGT....................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
...............TGACACAGGAAGTCCAGTAAG....................................................................................................................................................................................................................... 21 0 4 0.50 2 2 0 0 0 0 0 0 0
.........................................................................................................AGGTGGACAACAAATATT................................................................................................................................ 18 0 2 0.50 1 0 1 0 0 0 0 0 0
TGTTTTAAGTTTATTTGACACAGGAAG................................................................................................................................................................................................................................ 27 0 4 0.50 2 0 1 0 0 0 1 0 0
..................................................................................CAAAGAAGTAAATACCATGGAATAG................................................................................................................................................ 25 0 2 0.50 1 0 1 0 0 0 0 0 0
..............................................................................ATCTCAAAGAAGTAAATACCAT....................................................................................................................................................... 22 0 2 0.50 1 0 1 0 0 0 0 0 0
........................................................................ATTAAAATCTCAAAGAAGTAAA............................................................................................................................................................. 22 0 2 0.50 1 0 1 0 0 0 0 0 0
.............................................................................................................GGACAACAAATATTAATTT........................................................................................................................... 19 0 2 0.50 1 0 1 0 0 0 0 0 0
...............................................................................................ACCATGGAATAGGTGGACAACAAAT................................................................................................................................... 25 0 2 0.50 1 0 0 1 0 0 0 0 0
..................................................CTTTAGTTCCAAATAATGTTAAATTAAA............................................................................................................................................................................. 28 0 2 0.50 1 0 1 0 0 0 0 0 0
....................CAGGAAGTCCAGTAAGCTTTATTCAAA............................................................................................................................................................................................................ 27 0 4 0.50 2 0 0 0 0 0 2 0 0
TGTTTTAAGTTTATTTGACACAGGA.................................................................................................................................................................................................................................. 25 0 4 0.50 2 0 0 0 2 0 0 0 0
....................................................................................................GGAATAGGTGGACAACAAATATTAAT............................................................................................................................. 26 0 2 0.50 1 0 1 0 0 0 0 0 0
..................................................................................................ATGGAATAGGTGGACAACAAATATT................................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................ATACCATGGAATAGGTGGACAACAAA.................................................................................................................................... 26 0 2 0.50 1 0 0 1 0 0 0 0 0
..........................................................................................TAAATACCATGGAATAGGTGG............................................................................................................................................ 21 0 2 0.50 1 0 1 0 0 0 0 0 0
...................................................................................GAAGAAGTAAATACCATGGAATAGG............................................................................................................................................... 25 1 2 0.50 1 0 1 0 0 0 0 0 0
.....................................................................................AGAAGTAAATACCATGGAATAGGTGG............................................................................................................................................ 26 0 2 0.50 1 0 0 1 0 0 0 0 0
..................................................CTTTAGTTCCAAATAATGT...................................................................................................................................................................................... 19 0 2 0.50 1 0 1 0 0 0 0 0 0
...............................................................................................ACCATGGAATAGGTGGACAAC....................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................................ATGGAATAGGTGGACAAC....................................................................................................................................... 18 0 2 0.50 1 0 0 0 0 0 1 0 0
.......................................................................................................ATAGGTGGACAACAAATATTAATTT........................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0 0 0 0
....................................................................................................................................AAAAATTGAATGCAGTGT..................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................AAAAATTGAATGCAGTGTATATTTTC............................................................................................. 26 0 2 0.50 1 0 0 1 0 0 0 0 0
...........................................................................................AAATACCATGGAATAGGTGGACA......................................................................................................................................... 23 0 2 0.50 1 0 1 0 0 0 0 0 0
...................................................................................................................................CAAAAATTGAATGCAGTGT..................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................TCTCAAAGAAGTAAATACCATGGA.................................................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0 0 0 0
.........................................................................TTAAAATCTCAAAGAAGTAAA............................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................TAAATTAAAATCTCAAAGAAGT................................................................................................................................................................ 22 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................................AGGTGGACAACAAATATTAAT............................................................................................................................. 21 0 2 0.50 1 0 0 0 0 0 1 0 0
...................................................................................AAAGAAGTAAATACCATGGAATAG................................................................................................................................................ 24 0 2 0.50 1 0 1 0 0 0 0 0 0
................................................ATCTTTAGTTCCAAATAATGTTAAAT................................................................................................................................................................................. 26 0 2 0.50 1 0 1 0 0 0 0 0 0
.............TTTGACACAGGAAGTCCAGTA......................................................................................................................................................................................................................... 21 0 4 0.50 2 2 0 0 0 0 0 0 0
...........................................................................................AAATACCATGGAATAGGTG............................................................................................................................................. 19 0 2 0.50 1 0 0 1 0 0 0 0 0
.............................................................................................ATACCATGGAATAGGTGGACA......................................................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
..........................................................................................................................................TGAATGCAGTGTATATTTTCATAAAAA...................................................................................... 27 0 2 0.50 1 0 1 0 0 0 0 0 0
....................................................................................................................................AAAAATTGAATGCAGTGTATATTTTCATAA......................................................................................... 30 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................................................................GAATGCAGTGTATATTTTC............................................................................................. 19 0 2 0.50 1 0 1 0 0 0 0 0 0
...................................................................................AAAGAAGTAAATACCATGGA.................................................................................................................................................... 20 0 2 0.50 1 0 0 0 0 1 0 0 0
.........................................................................................................................................TTGAATGCAGTGTATATTTTCATAA......................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................................................................ATGCAGTGTATATTTTCATAAAAA...................................................................................... 24 0 2 0.50 1 0 1 0 0 0 0 0 0
.....TAAGTTTATTTGACACAGGAAG................................................................................................................................................................................................................................ 22 0 4 0.50 2 0 1 0 0 1 0 0 0
.......................................................GTTCCAAATAATGTTAAATTA............................................................................................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
..................................................................................................ATGGAATAGGTGGACAACAAA.................................................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
..........................................TCAAAAATCTTTAGTTCCAAATAATGTT..................................................................................................................................................................................... 28 0 2 0.50 1 0 1 0 0 0 0 0 0
........................................................................................................................................ATTGAATGCAGTGTATATTTC.............................................................................................. 21 1 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................AAAAATTGAATGCAGTGTATATT................................................................................................ 23 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................................CATGGAATAGGTGGACAACAAATATT................................................................................................................................ 26 0 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................TAGTTCCAAATAATGTTAAATT................................................................................................................................................................................ 22 0 2 0.50 1 0 1 0 0 0 0 0 0
....................................................................................................................................AAAAATTGAATGCAGTGTA.................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0
..................CACAGGAAGTCCAGTAAGCTTTATTCAAA............................................................................................................................................................................................................ 29 0 4 0.50 2 2 0 0 0 0 0 0 0
.GTTTTAAGTTTATTTGACACAGGAAGT............................................................................................................................................................................................................................... 27 0 4 0.50 2 1 1 0 0 0 0 0 0
.....................................................................................................................................AAAATTGAATGCAGTGTATAT................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................TAAAATCTCAAAGAAGTAAATACCATGG..................................................................................................................................................... 28 0 2 0.50 1 0 1 0 0 0 0 0 0
...................................................................GTTAAATTAAAATCTCAAAG.................................................................................................................................................................... 20 0 2 0.50 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................CGAGGATCTCGCCTCTCACCC............................ 21 0 2 0.50 1 0 1 0 0 0 0 0 0
.............................................................................................................................TTTTTGCAAAAATTGAATGCAGT....................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................................TACCATGGAATAGGTGGACAACAAATATC................................................................................................................................ 29 1 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................ATACCATGGAATAGGTGGACAAC....................................................................................................................................... 23 0 2 0.50 1 0 0 0 0 1 0 0 0
........................................................................................AGTAAATACCATGGAATAG................................................................................................................................................ 19 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................AATACCATGGAATAGGTGGAC.......................................................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
.......................................................................................................................................AATTGAATGCAGGGTATAT................................................................................................. 19 1 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................GTAAATACCATGGAATAGGTGGACA......................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................AATCTCAAAGAAGTAAATACCAT....................................................................................................................................................... 23 0 2 0.50 1 0 1 0 0 0 0 0 0
...........................................................................................AAATACCATGGAATAGGTGGACAAC....................................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0 0 0 0
............ATTTGACACAGGAAGTCCAGTAAGCT..................................................................................................................................................................................................................... 26 0 4 0.50 2 1 1 0 0 0 0 0 0
.................ACACAGGAAGTCCAGTAAGCTTTATT................................................................................................................................................................................................................ 26 0 4 0.50 2 1 1 0 0 0 0 0 0
.............................................................................................ATACCATGGAATAGGTGG............................................................................................................................................ 18 0 2 0.50 1 0 1 0 0 0 0 0 0
..............................................................................ATCTCAAAGAAGTAAATACCATGGA.................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................................................................................CAAAAATTGAATGCAGTGTA.................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
.......AGTTTATTTGACACAGGAAGTCCAGTAA........................................................................................................................................................................................................................ 28 0 4 0.50 2 2 0 0 0 0 0 0 0
...................................................................................AAAGAAGTAAATACCATGGAATAGGTGT............................................................................................................................................ 28 1 2 0.50 1 0 1 0 0 0 0 0 0
................................................................AATGTTAAATTAAAATCTCA....................................................................................................................................................................... 20 0 2 0.50 1 0 1 0 0 0 0 0 0
...................................................................................................................................CAAAAATTGAATGCAGTGTATAT................................................................................................. 23 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................................................AATTTTTGGAAAAATTGAATGCAGT....................................................................................................... 25 1 2 0.50 1 0 1 0 0 0 0 0 0
...........TATTTGACACAGGAAGTCCAGTAAGCT..................................................................................................................................................................................................................... 27 0 4 0.50 2 1 1 0 0 0 0 0 0
........................................................................................................................................ATTGAATGCAGTGTATATTTTCATA.......................................................................................... 25 0 2 0.50 1 0 1 0 0 0 0 0 0
.......AGTTTATTTGACACAGGAAGTCC............................................................................................................................................................................................................................. 23 0 4 0.50 2 1 0 0 0 1 0 0 0
....................................................................................................................................AAAAATTGAATGCAGTGTATATTTT.............................................................................................. 25 0 2 0.50 1 0 1 0 0 0 0 0 0
.......AGTTTATTTGACACAGGAAGTCCAGT.......................................................................................................................................................................................................................... 26 0 4 0.50 2 2 0 0 0 0 0 0 0
.........................................................................................GTAAATACCATGGAATAGG............................................................................................................................................... 19 0 2 0.50 1 0 1 0 0 0 0 0 0
.................................................................................................CATGGAATAGGTGGACAACAA..................................................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
...................................................TTTAGTTCCAAATAATGTTAAA.................................................................................................................................................................................. 22 0 2 0.50 1 0 1 0 0 0 0 0 0
..................................................................................................ATGGAATAGGTGGACAACAGAT................................................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................................AAAGAAGTAAATACCATGGAATAGGTGGA........................................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................................................AATAGGTGGACAACAAATATTAATTTTTG........................................................................................................................ 29 0 2 0.50 1 0 0 0 0 0 1 0 0
....................................................................................................................................AAAAATTGAATGCAGTGTATAT................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................................................................TATTAATTTTTGCAAAAAT................................................................................................................. 19 0 2 0.50 1 0 1 0 0 0 0 0 0
...........................................................................................AAATACCATGGAATAGGTGGA........................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................................................................CAAATATTAATTTTTGCAA..................................................................................................................... 19 0 2 0.50 1 0 1 0 0 0 0 0 0
..............................................................................................TACCATGGAATAGGTGGACA......................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................TTAGTTCCAAATAATGTTAAATT................................................................................................................................................................................ 23 0 2 0.50 1 0 1 0 0 0 0 0 0
............................................................................................................................ATTTTTGCAAAAATTGAATGC.......................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
..............................................................................................TACCATGGAATAGGTGGACAACAAATATT................................................................................................................................ 29 0 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................GTTAAATTAAAATCTCAAAGAA.................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0
................GACACAGGAAGTCCAGTAAG....................................................................................................................................................................................................................... 20 0 4 0.50 2 2 0 0 0 0 0 0 0
.....................................................................................................................................AAAATTGAATGCAGTGTATATT................................................................................................ 22 0 2 0.50 1 0 1 0 0 0 0 0 0
....................................................................................................GGAATAGGTGGACAACAAATATTAATTT........................................................................................................................... 28 0 2 0.50 1 0 1 0 0 0 0 0 0
....................................................................................AAGAAGTAAATACCATGGAATAGG............................................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0 0 0 0
.............................................................................................................................................ATGCAGTGTATATTTTCA............................................................................................ 18 0 2 0.50 1 0 1 0 0 0 0 0 0
...............................................................................................................................TTTGCAAAAATTGAATGC.......................................................................................................... 18 0 2 0.50 1 0 1 0 0 0 0 0 0
.............................................AAAATCTTTAGTTCCAAATAATGTTA.................................................................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0
...........................................................................................AAATACCATGGAATAGGTGGACAACAAA.................................................................................................................................... 28 0 2 0.50 1 0 1 0 0 0 0 0 0
............................................................................................AATACCATGGAATAGGTGG............................................................................................................................................ 19 0 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................TAAAATCTCAAAGAAGTAAA............................................................................................................................................................. 20 0 2 0.50 1 0 1 0 0 0 0 0 0
......................................................................AAATTAAAATCTCAAAGAAGTAAATACC......................................................................................................................................................... 28 0 2 0.50 1 0 1 0 0 0 0 0 0
.......AGTTTATTTGACACAGGAAGT............................................................................................................................................................................................................................... 21 0 4 0.50 2 2 0 0 0 0 0 0 0
..............................................................................................................................TTTTGCAAAAATTGAATGCAGTGT..................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................................TCTTTAGTTCCAAATAATGTTAAATTA............................................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0 0 0 0
.........................AGTCCAGTAAGCTTTATTCAAA............................................................................................................................................................................................................ 22 0 4 0.50 2 0 2 0 0 0 0 0 0
.....................................................................................................................................AAAATTGAATGCAGTGTATATTTT.............................................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................................CATGGAATAGGTGGACAACAAATAT................................................................................................................................. 25 0 2 0.50 1 0 1 0 0 0 0 0 0
...................................................................................................................................CAAAAATTGAATGCAGTGTATA.................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0
...........TATTTGACACAGGAAGTCCA............................................................................................................................................................................................................................ 20 0 4 0.50 2 1 1 0 0 0 0 0 0
................................................................................CTCAAAGAAGTAAATACCATGGAATA................................................................................................................................................. 26 0 2 0.50 1 0 1 0 0 0 0 0 0
...............................................................................................................................CTTGCAAAAATTGAATGCAGTGT..................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................................AAGTAAATACCATGGAATAGG............................................................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
.................................................................................................CATGGAATAGGTGGACAACAAATA.................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................AAGAAGTAAATACCATGGAATAGGTG............................................................................................................................................. 26 0 2 0.50 1 0 1 0 0 0 0 0 0
.........................................................................TTAAAATCTCAAAGAAGTAAAT............................................................................................................................................................ 22 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................................................................ATGCAGTGTATATTTTCATAA......................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................ATCTCAAAGAAGTAAATACCATG...................................................................................................................................................... 23 0 2 0.50 1 0 1 0 0 0 0 0 0
...................................................................................AAAGAAGTAAATACCATGGAATAAGTG............................................................................................................................................. 27 1 2 0.50 1 0 1 0 0 0 0 0 0
......................................................................................................................................AAATTGAATGCAGTGTATATTTTC............................................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0 0
..............TTGACACAGGAAGTCCAGTAAGCT..................................................................................................................................................................................................................... 24 0 4 0.50 2 0 2 0 0 0 0 0 0
.............................................................................AATCTCAAAGAAGTAAATACCATGGA.................................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0
........................................................................................AGTAAATACCATGGAATAGGA.............................................................................................................................................. 21 1 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................................................................................TGAATGCAGTGTATATTTTCATAAAA....................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................................................................................AAAATTGAATGCAGTGTAT................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................CAAAGAAGTAAATACCATGGAATAGG............................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0
...................................................................................................TGGAATAGGTGGACAACAAATATTAATT............................................................................................................................ 28 0 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................GTTAAATTAAAATCTCAAAGAAGTAAAT............................................................................................................................................................ 28 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................GTAAATACTATGGAATAGGT.............................................................................................................................................. 20 1 2 0.50 1 0 1 0 0 0 0 0 0
..................CACAGGAAGTCCAGTAAGCTTTATTC............................................................................................................................................................................................................... 26 0 4 0.50 2 0 2 0 0 0 0 0 0
.......................................................................AATTAAAATCTCAAAGAAGT................................................................................................................................................................ 20 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................................GAAGTAAATACCATGGAATAGGTGGAC.......................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................................................................AATATTAATTTTTGCAAAAATTGAAT............................................................................................................ 26 0 2 0.50 1 0 1 0 0 0 0 0 0
.............................................................................................ATACCATGGAATAGGTGGACAACAAAT................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0 0 0 0
................................................ATCTTTAGTTCCAAATAATGTTAAATT................................................................................................................................................................................ 27 0 2 0.50 1 0 1 0 0 0 0 0 0
..........................................................................................TAAATACCATGGAATAGGTGGA........................................................................................................................................... 22 0 2 0.50 1 0 0 1 0 0 0 0 0
.......................................................GTTCCAAAGAATGTTAAATTAAA............................................................................................................................................................................. 23 1 2 0.50 1 0 1 0 0 0 0 0 0
..................................................................................................ATGGAATAGGTGGACAACAAATATTAA.............................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................................AAGTAAATACCATGGAATAGGTGGACAA........................................................................................................................................ 28 0 2 0.50 1 0 0 1 0 0 0 0 0
.............................CAGTAAGCTTTATTCAAAAATC........................................................................................................................................................................................................ 22 0 4 0.50 2 0 1 0 0 1 0 0 0
..............................................................................................TACCATGGAATAGGTGGAC.......................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................AAAATCTTTAGTTCCAAATAATGTTAAAT................................................................................................................................................................................. 29 0 2 0.50 1 0 1 0 0 0 0 0 0
.................................................................................................CATGGAATAGGTGGACAACAAAT................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................................................................................AAAATTGAATGCAGTGTATATTTTC............................................................................................. 25 0 2 0.50 1 0 1 0 0 0 0 0 0
....................................................................TTAAATTAAAATCTCAAAGAAGT................................................................................................................................................................ 23 0 2 0.50 1 0 1 0 0 0 0 0 0
..................................................................................CAAAGAAGTAAATACCATGGAAT.................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................AATCTCAAAGAAGTAAATACCATGG..................................................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0 0 0 0
.................................................................................................CATGGAATAGGTGGACAACAAATATTAA.............................................................................................................................. 28 0 2 0.50 1 1 0 0 0 0 0 0 0
.......AGTTTATTTGACACAGGAAG................................................................................................................................................................................................................................ 20 0 4 0.50 2 0 1 0 0 0 1 0 0
...................................................................................AAAGAAGTAAAGACCATG...................................................................................................................................................... 18 1 3 0.33 1 0 0 0 0 1 0 0 0
.......................................TATTCAAAAATCTTTAGTTCCAAATAA......................................................................................................................................................................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0
...................................GCTTTATTCAAAAATCTTTAGTTCCAAA............................................................................................................................................................................................ 28 0 3 0.33 1 0 1 0 0 0 0 0 0
...................................................................................AAAGAAGTTAATACCATGGA.................................................................................................................................................... 20 1 3 0.33 1 0 1 0 0 0 0 0 0
....................................................................................AAGAAGTAAATACCATGGAATA................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0
..............................AGTAAGCTTTATTCAAAAATCT....................................................................................................................................................................................................... 22 0 4 0.25 1 0 1 0 0 0 0 0 0
...TTTAAGTTTATTTGACACAGGAAGTCC............................................................................................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0 0
..................CACAGGAAGTCCGGTAAGCTT.................................................................................................................................................................................................................... 21 1 4 0.25 1 1 0 0 0 0 0 0 0
..........................GTCCAGTAAGCTTTATTCAAAAA.......................................................................................................................................................................................................... 23 0 4 0.25 1 0 1 0 0 0 0 0 0
..................................AGCTTTATTCAAAAATCTTTAGTTCC............................................................................................................................................................................................... 26 0 4 0.25 1 0 1 0 0 0 0 0 0
.........................AGTCCAGTAAGCTTTATTCAAAAATCTT...................................................................................................................................................................................................... 28 0 4 0.25 1 0 1 0 0 0 0 0 0
....................CAGGAAGTCCAGTAAGCTT.................................................................................................................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0
...TTTAAGTTTATTTGACACAGGAAGTCCA............................................................................................................................................................................................................................ 28 0 4 0.25 1 1 0 0 0 0 0 0 0
..........TTATTTGACACAGGAAGTCCA............................................................................................................................................................................................................................ 21 0 4 0.25 1 1 0 0 0 0 0 0 0
...................................GCTTTATTCAAAAATCTTTAGTT................................................................................................................................................................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0
..............TTGACACAGGAAGTCCAGT.......................................................................................................................................................................................................................... 19 0 4 0.25 1 0 1 0 0 0 0 0 0
..............TTGACACAGGAAGTCCAGTAAGCTTTA.................................................................................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0 0
.......................................TATTCAAAAATCTTTAGTTCC............................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0
......AAGTTTATTTGACACAGGAAGTCCAGTA......................................................................................................................................................................................................................... 28 0 4 0.25 1 1 0 0 0 0 0 0 0
.......AGTTTATTTGACACAGGAAGTCCAGTAAG....................................................................................................................................................................................................................... 29 0 4 0.25 1 1 0 0 0 0 0 0 0
...........................TCCAGTAAGCTTTATTCAAAAATC........................................................................................................................................................................................................ 24 0 4 0.25 1 0 1 0 0 0 0 0 0
..............TTGACACAGGAAGTCCAGTAAGCTTTAC................................................................................................................................................................................................................. 28 1 4 0.25 1 0 0 0 0 1 0 0 0
.............TTTGACACAGGAAGTCCAGTAA........................................................................................................................................................................................................................ 22 0 4 0.25 1 1 0 0 0 0 0 0 0
......................................TTATTCAAAAATCTTTAGTTCCA.............................................................................................................................................................................................. 23 0 4 0.25 1 0 1 0 0 0 0 0 0
..........TTATTTGACACAGGAAGTCCAGTAAGC...................................................................................................................................................................................................................... 27 0 4 0.25 1 0 1 0 0 0 0 0 0
...TTTAAGTTTATTTGACACAGGAAGT............................................................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0
....TTAAGTTTATTTGACACAGGAAGTCCA............................................................................................................................................................................................................................ 27 0 4 0.25 1 1 0 0 0 0 0 0 0
..........................GTCCAGTAAGCTTTATTCAAAAAT......................................................................................................................................................................................................... 24 0 4 0.25 1 0 1 0 0 0 0 0 0
................GACACAGGAAGTCCAGTA......................................................................................................................................................................................................................... 18 0 4 0.25 1 0 1 0 0 0 0 0 0
..TTTTAAGTTTATTTGACACAGGAAGTCC............................................................................................................................................................................................................................. 28 0 4 0.25 1 1 0 0 0 0 0 0 0
.............TTTGACACAGGAAGTCCAGTAAGCTTTA.................................................................................................................................................................................................................. 28 0 4 0.25 1 0 1 0 0 0 0 0 0
TGTTTTAAGTTTATTTGAC........................................................................................................................................................................................................................................ 19 0 4 0.25 1 0 1 0 0 0 0 0 0
..................GACAGGAAGTCCAGTAAGCT..................................................................................................................................................................................................................... 20 1 4 0.25 1 0 1 0 0 0 0 0 0
...............TGACACAGGAAGTCCAGTA......................................................................................................................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0
............ATTTGACACAGGAAGTCCAGTAAGCTT.................................................................................................................................................................................................................... 27 0 4 0.25 1 1 0 0 0 0 0 0 0
..................CACAGTAAGTCCAGTAAGCT..................................................................................................................................................................................................................... 20 1 4 0.25 1 1 0 0 0 0 0 0 0
.........................AGTCCAGTAAGCTTTATTCAAAA........................................................................................................................................................................................................... 23 0 4 0.25 1 0 1 0 0 0 0 0 0
......AAGTTTATTTGACACAGGAAGTCCA............................................................................................................................................................................................................................ 25 0 4 0.25 1 1 0 0 0 0 0 0 0
....TTAAGTTTATTTGACACAGGAAGTCCAGTA......................................................................................................................................................................................................................... 30 0 4 0.25 1 1 0 0 0 0 0 0 0
................GACACAGGAAGTCCAGTAAGCTTTATT................................................................................................................................................................................................................ 27 0 4 0.25 1 0 1 0 0 0 0 0 0
..................CACAGGAAGTCCAGTAAGCTTTATTCAA............................................................................................................................................................................................................. 28 0 4 0.25 1 1 0 0 0 0 0 0 0
......................................TTATTCAAAAATCTTTAGTTCCAA............................................................................................................................................................................................. 24 0 4 0.25 1 0 0 1 0 0 0 0 0
...........................TCCAGTAAGCTTTATTCAAAAAT......................................................................................................................................................................................................... 23 0 4 0.25 1 0 1 0 0 0 0 0 0
..TTTTAAGTTTATTTGACACAGGA.................................................................................................................................................................................................................................. 23 0 4 0.25 1 0 1 0 0 0 0 0 0
..................CACAGGAAGTCCAGTAAG....................................................................................................................................................................................................................... 18 0 4 0.25 1 0 1 0 0 0 0 0 0
...............TGACACAGGAAGTCCAGT.......................................................................................................................................................................................................................... 18 0 4 0.25 1 0 1 0 0 0 0 0 0
.........TTTATTTGACACAGGAAGTCCAGTAAGC...................................................................................................................................................................................................................... 28 0 4 0.25 1 0 0 0 0 0 0 0 1
TGTTTTAAGTTTATTTGCCACAGGA.................................................................................................................................................................................................................................. 25 1 4 0.25 1 0 0 0 1 0 0 0 0
.GTTTTAAGTTTATTTGACACAGGAAGTCC............................................................................................................................................................................................................................. 29 0 4 0.25 1 1 0 0 0 0 0 0 0
...............TGACACAGAAAGTCCAGTAAG....................................................................................................................................................................................................................... 21 1 4 0.25 1 0 1 0 0 0 0 0 0

Anti-sense strand reads

ACAAAATTCAAATAAACTGTGTCCTTCAGGTCATTCGAAATAAGTTTTTAGAAATCAAGGTTTATTACAATTTAATTTTAGAGTTTCTTCATTTATGGTACCTTATCCACCTGTTGTTTATAATTAAAAACGTTTTTAACTTACGTCACATATAAAAGTATTTTTNNNNNNNNNNAAGTTCGGCAAGCAAAACGGGGTTTCGGCTCCTAGAGCGGAGAGTGGGTTCACGTCCGCCTACGTCTGAACTGCAA
*************************************************************************************************......((...(((..((..............((((........)))).............))..))).))*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 V120
male body		 GSM1528802
follicle cells		 V046
embryo
 V058
head
 M026
head
..................................TCGAAATAAGTTTTTAGAAATCAAGGT.............................................................................................................................................................................................. 27 0 4 30.75 123 34 40 45 0 3 1 0
..................................TCGAAATAAGTTTTTAGAAATCAAGGTT............................................................................................................................................................................................. 28 0 4 4.75 19 4 11 4 0 0 0 0
................................................................................................GGTACCTTATCCACCTGTTGTTTAT.................................................................................................................................. 25 0 2 4.50 9 5 2 0 0 2 0 0
..............................................................................................ATGGTACCTTATCCACCTGTTGTTTAT.................................................................................................................................. 27 0 2 4.00 8 8 0 0 0 0 0 0
..................................CCGAAATAAGTTTTTAGAAATCAAGGT.............................................................................................................................................................................................. 27 1 4 3.25 13 0 13 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAAATCAAGTT.............................................................................................................................................................................................. 27 1 4 3.25 13 1 12 0 0 0 0 0
..............................................................................TAGAGTTTCTTCATTTATGGTACCT.................................................................................................................................................... 25 0 2 3.00 6 1 0 0 5 0 0 0
...................................................................................................ACCTTATCCACCTGTTGTTTATAAT............................................................................................................................... 25 0 2 3.00 6 6 0 0 0 0 0 0
...............................................................................AGAGTTTCTTCATTTATGGTACCTT................................................................................................................................................... 25 0 2 3.00 6 0 0 0 6 0 0 0
...................................CGAAATAAGTTTTTAGAAATCAAGGT.............................................................................................................................................................................................. 26 0 4 2.75 11 7 3 0 0 1 0 0
..................................TCGAAATAAGTTTTTAGAAATCAAGGTTT............................................................................................................................................................................................ 29 0 3 2.33 7 0 3 3 0 0 0 1
.......TCAAATAAACTGTGTCCTTCAGGTCAT......................................................................................................................................................................................................................... 27 0 4 2.25 9 7 2 0 0 0 0 0
.................................................................TACAATTTAATTTTAGAGTTTCTTCATT.............................................................................................................................................................. 28 0 2 2.00 4 3 0 0 1 0 0 0
.............................................................................TTAGAGTTTCTTCATTTATGGTACCT.................................................................................................................................................... 26 0 2 2.00 4 0 0 0 4 0 0 0
............................................................................................................................TAAAAACGTTTTTAACTTACGTCACATA................................................................................................... 28 0 2 1.50 3 2 1 0 0 0 0 0
..................................................................ACAATTTAATTTTAGAGTTTCTTCATT.............................................................................................................................................................. 27 0 2 1.50 3 3 0 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAAATCAAGG............................................................................................................................................................................................... 26 0 4 1.25 5 4 1 0 0 0 0 0
..................................CCGAAATAAGTTTTTAGAAATCAAGTT.............................................................................................................................................................................................. 27 2 4 1.00 4 0 4 0 0 0 0 0
.............................................TTTTAGAAATCAAGGTTTATTACAAT.................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0 0 0
.......................................................................................................................................TTAACTTACGTCACATATAAAAGTAT.......................................................................................... 26 0 2 1.00 2 2 0 0 0 0 0 0
........CAAATAAACTGTGTCCTTCAGGTCAT......................................................................................................................................................................................................................... 26 0 4 1.00 4 4 0 0 0 0 0 0
......................................................................................................................................TTTAACTTACGTCACATATAAAAGTAT.......................................................................................... 27 0 2 1.00 2 2 0 0 0 0 0 0
....................................................................................................CCTTATCCACCTGTTGTTTATAAT............................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0 0 0
....................GTCCTTCAGGTCATTCGAAATAAGT.............................................................................................................................................................................................................. 25 0 4 1.00 4 3 1 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAAATCATGGT.............................................................................................................................................................................................. 27 1 4 1.00 4 0 4 0 0 0 0 0
..........................................................................................................CCACCTGTTGTTTATAATTAAAAACGT...................................................................................................................... 27 0 2 1.00 2 1 0 0 1 0 0 0
............................................................................................TTATGGTACCTTATCCACCTGTTGT...................................................................................................................................... 25 0 2 1.00 2 2 0 0 0 0 0 0
...............................................................................................TGGTACCTTATCCACCTGTTGTTTAT.................................................................................................................................. 26 0 2 1.00 2 2 0 0 0 0 0 0
................................................................................................GGTACCTTATCCACCTCTTGTTTAT.................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0 0 0
.......................................................................TTAATTTTAGAGTTTCTTCATTTATG.......................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
............................................................................................TTATGGTACCTTATCCACCTGTTGTTTA................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................................................TAACTTACGTCACATATAAAAGTATTT........................................................................................ 27 0 2 0.50 1 1 0 0 0 0 0 0
..........................CAGGTCATTCGACATAAGTTTTTAGAAAT.................................................................................................................................................................................................... 29 1 4 0.50 2 0 0 0 2 0 0 0
.........................................................................................................................................AACTTACGTCACATATAGAAGTATTT........................................................................................ 26 1 2 0.50 1 1 0 0 0 0 0 0
....................................GAAATAAGTTTTTAGAAATCAAGGT.............................................................................................................................................................................................. 25 0 4 0.50 2 0 1 1 0 0 0 0
.............................................................................................................................AAAAACGTTTTTAACTTACGTCACAT.................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
................................................................................................GGTACCTTATCCACCTGTTGTTT.................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0
...............................................TTAGAAATCAAGGTTTATTAC....................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
..............................................................................................ATGGTACCTTATCCACCTTTTGTTTAT.................................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0 0 0
............................................................................................................................TAAAAACGTTTTTAACTTACGTCACATAT.................................................................................................. 29 0 2 0.50 1 0 1 0 0 0 0 0
...............................................................................................................................AAACGTTTTTAACTTACGTCACATA................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0
..............................................................................................ATGGTACCTTATCCACCTGTTGTTT.................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0
............................................................................................................................TAAAAACGTTTTTAACTTACGTCACAGA................................................................................................... 28 1 2 0.50 1 0 1 0 0 0 0 0
......................CCTTCAGGTCATTCGAAATAAGTTTT........................................................................................................................................................................................................... 26 0 4 0.50 2 1 1 0 0 0 0 0
...................................................................................................ACCTTATCCACCTGTTGTTTATAA................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0
......................................................................................CTTCATTTATGGTACCTTATC................................................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0
....................GTCCTTCAGGTCATTCGAAATAAGTT............................................................................................................................................................................................................. 26 0 4 0.50 2 2 0 0 0 0 0 0
................................................................................................GGTACCTTATCCACCTGTTGTTTATAATC.............................................................................................................................. 29 1 2 0.50 1 1 0 0 0 0 0 0
..............................................................................................ATGGTACCTTATCCACCTGTTGTTTA................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
..................................CCGAAATAAGTTTTTAGAAATCAAGGTT............................................................................................................................................................................................. 28 1 4 0.50 2 0 2 0 0 0 0 0
.............................................................TTATTACAATTTAATTTTAGAGTTTCTT.................................................................................................................................................................. 28 0 2 0.50 1 1 0 0 0 0 0 0
.........................................................................AATTTTAGAGTTTCTTCATTTATGGT........................................................................................................................................................ 26 0 2 0.50 1 1 0 0 0 0 0 0
..............................................................................TAGAGTTTCTTCATTTATGGTACCTTAT................................................................................................................................................. 28 0 2 0.50 1 1 0 0 0 0 0 0
.................................TTCGAAATAAGTTTTTAGAAATCAAGGT.............................................................................................................................................................................................. 28 0 4 0.50 2 0 2 0 0 0 0 0
....................................................................................TTCTTCATTTATGGTACCTTATCCACCT........................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0
...................................................................................................................................GTTTTTAACTTACGTCACATATAAAAG............................................................................................. 27 0 2 0.50 1 1 0 0 0 0 0 0
..........................................................................................................CCACCTGTTGTTTATAATTAAAAAAGT...................................................................................................................... 27 1 2 0.50 1 0 1 0 0 0 0 0
.......................................................................TTAATTTTAGAGTTTCTTCATTTATGGT........................................................................................................................................................ 28 0 2 0.50 1 1 0 0 0 0 0 0
...................................CGAAATAAGTTTTTAGAAATCAAGTT.............................................................................................................................................................................................. 26 1 4 0.50 2 0 2 0 0 0 0 0
............................................................................TTTAGAGTTTCTTCATTTATGGTACCTT................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0
......................CCTTCAGGTCATTCGAAATAAGTTT............................................................................................................................................................................................................ 25 0 4 0.50 2 2 0 0 0 0 0 0
..................................................................................................TACCTTATCCACCTGTTGT...................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................................TTTAACTTACGTCACATATAAAAGT............................................................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0
...........................................GTTTTTAGAAATCAAGGTTTATTACAAT.................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0
....................GTCCTTCAGGTCATTCGAAATAAGTTT............................................................................................................................................................................................................ 27 0 4 0.50 2 2 0 0 0 0 0 0
..................................................................................................................................CGTTTTTAACTTACGTCACAT.................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
.........................................................................................................................................AACTTACGTCACATATAAAAGTATTTT....................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0
..................................................................................................TACCTTATCCACCTGTTGTTTATAAT............................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
.........................................................................................................................................AACTTACGTCACATATAAAAGTATTT........................................................................................ 26 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................................AGAGTTTCTTCATTTATGGTACCTTAT................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0 0 0
......TTCAAATAAACTGTGTCCTTCAGGTCAT......................................................................................................................................................................................................................... 28 0 4 0.50 2 2 0 0 0 0 0 0
.................................................................................................TTACCTTATCCACCTGTTGTTT.................................................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0
..................................................................ACAATTTAATTTTAGAGTTTCTTCATTTC............................................................................................................................................................ 29 1 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................................................TAACTTACGTCACATATAAAAGTAC.......................................................................................... 25 1 2 0.50 1 1 0 0 0 0 0 0
............................................................................................TTATGGTACCTTATCCACCTGTTGTTTAT.................................................................................................................................. 29 0 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................................................TTTTAACTTACGTCACATATAAAAGT............................................................................................ 26 0 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................CCTTATCCACCTATTGTTTAT.................................................................................................................................. 21 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................................................TTTTAACTTACGTCACATATAAAAGTAT.......................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0
..........................................AGTTTTTAGAAATCAAGGTTTAT.......................................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0
........................................TAAGTTTTTAGAAATCAAGGTTTA........................................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0
...................................CGAAATAAGTTTTTAGAAATCAAGGTTT............................................................................................................................................................................................ 28 0 3 0.33 1 0 1 0 0 0 0 0
........................................TAAGTTTTTAGAAATCAAGGTTTAT.......................................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAAATCAAGGTGT............................................................................................................................................................................................ 29 1 3 0.33 1 0 1 0 0 0 0 0
........................................TAAGTTTTTAGAAATCAAGGTTT............................................................................................................................................................................................ 23 0 3 0.33 1 1 0 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAAGTCAAGGTT............................................................................................................................................................................................. 28 1 4 0.25 1 1 0 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAAATCAAGGTA............................................................................................................................................................................................. 28 1 4 0.25 1 1 0 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAGATCAAGGT.............................................................................................................................................................................................. 27 1 4 0.25 1 1 0 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAAATCATGTT.............................................................................................................................................................................................. 27 2 4 0.25 1 0 1 0 0 0 0 0
......................CCTTCAGGTCATTCGAAATAAGTT............................................................................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0 0 0 0
.......TCAAATAAACTGTGTCCTTCAGGT............................................................................................................................................................................................................................ 24 0 4 0.25 1 1 0 0 0 0 0 0
......................CCTTCAGGTCATTCGAAATAATTTT............................................................................................................................................................................................................ 25 1 4 0.25 1 0 1 0 0 0 0 0
......TTCAAATAAACTGTGTCCTTCAGGT............................................................................................................................................................................................................................ 25 0 4 0.25 1 1 0 0 0 0 0 0
.............AAACTGTGTCCTTCAGGTCATTCGAAAT.................................................................................................................................................................................................................. 28 0 4 0.25 1 1 0 0 0 0 0 0
....................GTCCTTCAGGTCATTCGAGATAAGTTT............................................................................................................................................................................................................ 27 1 4 0.25 1 1 0 0 0 0 0 0
........................................TAAGTTTTTAGAAATCAAGGT.............................................................................................................................................................................................. 21 0 4 0.25 1 1 0 0 0 0 0 0
.............AAACTGTGTCCTTCAGGTCATTCGAA.................................................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0
..........................CAGGTCATTCGAAATGAGTTTTTAGAAAT.................................................................................................................................................................................................... 29 1 4 0.25 1 0 0 0 1 0 0 0
.......CCAAATAAACTGTGTCCTTCAGGTCAT......................................................................................................................................................................................................................... 27 1 4 0.25 1 0 1 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAAATCAACTT.............................................................................................................................................................................................. 27 2 4 0.25 1 0 1 0 0 0 0 0
.......TCAAATAAACTGTGTCCTTCAGGTCA.......................................................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAAATCAATGGT............................................................................................................................................................................................. 28 2 4 0.25 1 0 1 0 0 0 0 0
..................................CAGAAATAAGTTTTTAGAAATCATGGT.............................................................................................................................................................................................. 27 3 4 0.25 1 0 1 0 0 0 0 0
.....ATTCAAATAAACTGTGTCCTTCAGGT............................................................................................................................................................................................................................ 26 0 4 0.25 1 1 0 0 0 0 0 0
.......TCAAATAAACTGTGTCCTTCAGGTTATT........................................................................................................................................................................................................................ 28 1 4 0.25 1 0 1 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAAA..................................................................................................................................................................................................... 20 0 4 0.25 1 0 0 1 0 0 0 0
...............................CATTCGAAATAAGTTTTTAGAAAT.................................................................................................................................................................................................... 24 0 4 0.25 1 0 1 0 0 0 0 0
..................................CCGAAATAAGTTTTTAGAAATCAACGT.............................................................................................................................................................................................. 27 2 4 0.25 1 0 1 0 0 0 0 0
..........................CAGGTCATTCGAAATAAGTTTTTAGAAAT.................................................................................................................................................................................................... 29 0 4 0.25 1 0 0 0 1 0 0 0
..................................TCGAATTAAGTTTTTAGAAATCAAGGT.............................................................................................................................................................................................. 27 1 4 0.25 1 1 0 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAAAC.................................................................................................................................................................................................... 21 1 4 0.25 1 1 0 0 0 0 0 0
........CAAATAAACTGTGTCCTTCAGGTCATT........................................................................................................................................................................................................................ 27 0 4 0.25 1 1 0 0 0 0 0 0
...................TGTCCTTCAGGTCATTCGAAATAAGTT............................................................................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0
...................................CGAAATAAGTTTTTAGAAATCAAGGGT............................................................................................................................................................................................. 27 1 4 0.25 1 0 1 0 0 0 0 0
...........................AGGTCATTCGAAATAAGTTT............................................................................................................................................................................................................ 20 0 4 0.25 1 0 0 1 0 0 0 0
.............AAACTGTGTCCTTCAGGTCATTCGA..................................................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0
..................GTGTCCTTCAGGTCATTCGAAATAAGT.............................................................................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0
..................................TCGAAATAAGTTTTTCGAAATCAAGGGT............................................................................................................................................................................................. 28 2 4 0.25 1 0 1 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAAATCAAGGA.............................................................................................................................................................................................. 27 1 4 0.25 1 0 0 0 0 0 1 0
.CAAAATTCAAATAAACTGTGTCCTT................................................................................................................................................................................................................................. 25 0 4 0.25 1 1 0 0 0 0 0 0
..................................TCGAAATAAGTTTTTAGAACTCAAGTT.............................................................................................................................................................................................. 27 2 4 0.25 1 0 1 0 0 0 0 0
...AAATTCAAATAAACTGTGTCCTTCAGG............................................................................................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0
.........................................AAGTTGTTAGAAATTAAGGTT............................................................................................................................................................................................. 21 2 5 0.20 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3R:7403730-7403980 - dya_966 TGTTTTAAGT---TTATTTGACACAGGAAGTCCAGTAAGCTTTATTCAAAAATCTTTAGTTCCAAATAATGTTAAA-TTAAA----ATCTCAAAGA----AGTAAATACCATGGAATAGGTGGACAACAAATATTAATTTTTGCAAAAATTGAATGCAGTGTATATTTT-CATAAAAANNNNNNNNNNTTCAAGCCGTTCGT-TTTGCCCCAAAGCCGAGGATCTCGCCTCTCACCCAAGTGCAGGCGGATGCAGACTTGACGTT
droEre2 scaffold_1429:4238-4394 - TGTTTTAAGT---TTATTTGGCACAGGAAGTCCAGTAATTTTTATTCAAAAATCTTTAGTTCCAAATAATATTAGA-TTAAA----ACCGCAAAGA----AGTAAATACCAAGGAATAGGTGGTCAACAAATATTAATTTGTGCAAAAATTGAGTGCATTGTAAATTTT------------------------------------------------------------------------------------------------
droSec2 scaffold_64:34460-34602 - TGTTTTAAGT---TTGTTCGACACAGGAAGTCCAGTTAGTTTTATTCAAAAATCTTAAGTTCCAAATAATATCAGA-TTAAA----ACCGTAAAGA----AGTAAATACCAT-------ACGGACAACAAACA----TTTTTGAAAGAATTTAGTGCATTGTATAT---------------------------------------------------------------------------------------------------
droSim2 3l:23148512-23148654 - TGTTTTAAGT---TTGTTTGACACAGGAAGTCCAGTAAGTTTTATTCAAAAATCTTAAGTTCCAAATAATATCAGA-TTAAA----ACCGCAAAGA----AGTAAATACCATA-------CAGACAACAAACA----TTTTTGCAAGAATTTAGTGCATTGTATAT---------------------------------------------------------------------------------------------------
dm3 chr2L:21559151-21559285 + TGTTTTAAGT---T--------------------------TTTATTCAAAAAGCTTCAGTTCCAAATAATATGAAA-TTGAA----ACCGCAAAGA----TGTGAATACCACGGAATAGGTGGACCAAAAATATTAATTTTTGCAAAAATGGAGTGCATTTTTATTCGT-----AGAA---------------------------------------------------------------------------------------
droEug1 scf7180000408090:3898-4041 + CATTTTTGCG---TTACTAGATACCGGAAGCCCCGTGAGTTTTATTAGCAGAGGAGTTATTCCACAAGCAGTAAAG-GACGA-ACACCTAGTAAAG----AGCAGTTTTCGCGGCCTAAGCGGCCAAAATATTTTGACATTTGGAAAAATTAA----------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302155:1688196-1688272 - TTCAAGCCGT---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTTTGCTCCCAAGCCGAGGATTTCGCCGCTTACCCAAGTGCAGCCCGATGCGGACTTGACGCT
droTak1 scf7180000411080:8816-8986 + AGTAATGAATGTCCTTTTTGATACCGGCAGCCCGGTTAGCTTCATAAACAAGACGAAATTGCCAAGAGATGTAACG-TTAGC-CAACCCATTTGAG----AGTAAATACCGTGGAATATATGGAAGAAATATTATACTATGCGGCGCAGTTAAATGCTATATTAAGTTT-AATTTAAA---------------------------------------------------------------------------------------
droEle1 scf7180000491104:1485829-1485905 - TTCAAGCCGT---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTTTTGCCCCTAAGCCGAGGATCTCACCGCTGACCCAAGTGCAGGGTGATGCGGACTTGACGCT
droRho1 scf7180000780111:29821-29928 - AGTTTATA-----------TGTACCGATAGTCCAGTAAGCTTTAGTAAGAAATCTTTTGTTCCAAAATATGTTAAT-TT---------------------------------------------------------CTTTTAGCAGAAATCGAATTCCTTATATATTCT-CACGAAAA---------------------------------------------------------------------------------------
droFic1 scf7180000449399:4148-4312 - TGTTTTAAGT---TTGTTTGACACAGGAAGTCCAGTTAGCTTTATTCAAAAATCATTAATTCCAAATAACGTTAAA-TTTAA----ATCGCATAGA----AGCAAATACCACGGTATAGGTGGGCAACAAATATTAATTTTTGGAGAAATTAAATGCTGTATATATTTT-CATGATAA---------------------------------------------------------------------------------------
droKik1 scf7180000301584:27421-27585 - AGTTTTAAGT---CTTTTCGATACAGGGAGTCCAGTAAGTTTTATTCAAAAATCTTTAGTTCCAAATAATTTTAAG-TTGAA----TCCTCAGAGA----AGTAAATACCACGGAATAGGTGGACAACAAATATTAACTTTTGCAAAAATCGAATGTTATGTATACTTT-AATGAAAA---------------------------------------------------------------------------------------
droAna3 scaffold_13340:2730421-2730497 + TTCAAGCCGT---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTATTCGCGCCCAAGCCTCGCATCTCGCCGTTAACCCAAGTCCAGGCGGAGGCAGAGTTGACCCT
droBip1 scf7180000396712:1609237-1609313 - TTCAAGCCGT---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTATTCGCGCCCAAGCCACGCATCTCGCCGTTGACCCAAGTTCAGGCGGAAGCAGAGTTGACCCT
dp5 Unknown_group_30:68397-68567 + TATTTTTAGT---CTATTTGATACAGGTAGCCCAGTAAGTTTTATTCATAAGTCTTTGATACCGAAGTCGGCTATAGTTGAAG---CCTATAATGAAGTTAGGAAATACTATGGACTAGGAGGACAACCAATTCCCATATGGGGAAAATTTAAGTGCCATATTGAATTT-TGCACAAA---------------------------------------------------------------------------------------
droPer2 scaffold_185:450-620 + TATGTTTAGT---CTATTTGATACAGGTAGCCCTGTGAGTTTTATTCATAAGTCTTTGATACCGAAGTCGGCTATAGTTGAAG---TCTATAATGAAGTCAGGAAATATTATGGACTAGGAGGACAACGAATTTTCATATGAGGAAAATTTAAGTGCCATATCGAATTT-TGCACAAA---------------------------------------------------------------------------------------
droWil2 scf2_1100000004958:2035853-2036018 + TATTTTTGCC---CTATTAGATTCCGGAAGCCCAGTAAGTTTTGCCAGTAGAGCGTTAATGCCGCATTTGCATTGC-GATAA----ATTAGTTAAA----AGATCTTTTCATGGGATGAGCGGTGGCTCTATTCTGACTTTTGGAGCAGTCAAATGTTTAGTTCTGTTTTGCTAAAAA---------------------------------------------------------------------------------------
droVir3 scaffold_13045:1534757-1534916 - TGTTTTTTGT---TTATTCGATACGGGGAGTCCCGAAAGCTTTATTCATAAGGCATTAATACCACAAAATATAAAG-TTAAA----ATC-TGAAGC----AGTCAATACCATGGATTACGAGGACGGCCTATCCCAACATGGGGAAAGTTGAAATGCCGAATTAATTTT-CAT----A---------------------------------------------------------------------------------------
droMoj3 scaffold_6540:13335763-13335839 - TTCAAGCCGT---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTTTGCGCCCAAGCCACGCATTTCGCCGCTGACTCAGGTGCAGGCTGACACTGAGCAGACGCT
droGri2 scaffold_14906:3234077-3234153 + TTCAAGCCGT---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATTTGCGCCCAAGCCGCGCATTTCACCACTGACCCAGGTGCAGGCGGATGCGGAGCAGACTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TGTTTTAAGT---TTATTTGACACAGGAAGTCCAGTAAGCTTTATTCAAAAATCTTTAGTTCCAAATAATGTTAAA-TTAAA----ATCTCAAAGA----AGTAAATACCATGGAATAGGTGGACAACAAATATTAATTTTTGCAAAAATTGAATGCAGTGTATATTTT-CATAAAAANNNNNNNNNNTTCAAGCCGTTCGT-TTTGCCCCAAAGCCGAGGATCTCGCCTCTCACCCAAGTGCAGGCGGATGCAGACTTGACGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................GACACAGGAAGTCCAGTAAGCT................................................................................................................................................................................................................................22410.2541060000350000
.....................CACAGGAAGTCCAGTAAGCT................................................................................................................................................................................................................................2049.2537031000330000
...........................................................................................AAAGA----AGTAAATACCATGGAATAGG.................................................................................................................................................2527.001409110030000
...........................................................................................AAAGA----AGTAAATACCATGGAATA...................................................................................................................................................2325.0010000000000010
.....................CACAGGAAGTCCAGTAAGCTT...............................................................................................................................................................................................................................2144.7519010000180000
.....................................................................................................GTAAATACCATGGAATAGGT................................................................................................................................................2024.50903000060000
...................................................................................................................................................AATTGAATGCAGTGTATAT...................................................................................................1924.50905000040000
................TTTGACACAGGAAGTCCAGTAAGCT................................................................................................................................................................................................................................2544.2517030000140000
.....................CACAGGAAGTCCAGTAAGC.................................................................................................................................................................................................................................1943.2513000010120000
...........................................................................................AAAGA----AGTAAATACCATGGAATAGGT................................................................................................................................................2623.00606000000000
.......................................................................................................................................AATTTTTGCAAAAATTGAATGCAGT.........................................................................................................2523.00600000060000
...........................................................................................AAAGA----AGTAAATACCATGGAATAGGTG...............................................................................................................................................2723.00606000000000
....................ACACAGGAAGTCCAGTAAGCT................................................................................................................................................................................................................................2142.7511000100100000
.............................................................................................................CATGGAATAGGTGGACAACA........................................................................................................................................2022.50501000040000
....................................................................................................AGTAAATACCATGGAATAGGT................................................................................................................................................2122.50501000130000
....................ACACAGGAAGTCCAGTAAGC.................................................................................................................................................................................................................................2042.501001000090000
...............ATTTGACACAGGAAGTCCAGT.....................................................................................................................................................................................................................................2142.5010000000100000
.......................................................................................................AAATACCATGGAATAGGT................................................................................................................................................1822.50502000210000
......................ACAGGAAGTCCAGTAAGCTT...............................................................................................................................................................................................................................2042.25900000180000
...............ATTTGACACAGGAAGTCCAGTAAGC.................................................................................................................................................................................................................................2542.25900000180000
....................ACACAGGAAGTCCAGTAAGCTT...............................................................................................................................................................................................................................2242.25901000080000
......................ACAGGAAGTCCAGTAAGCT................................................................................................................................................................................................................................1942.25904000050000
................TTTGACACAGGAAGTCCAGTAAGC.................................................................................................................................................................................................................................2442.25900000180000
..........................................................................................CAAAGA----AGTAAATACCATGGAATAGGT................................................................................................................................................2722.00403000010000
....................................................................................................................................................ATTGAATGCAGTGTATATTTT-...............................................................................................2122.00401000030000
...................GACACAGGAAGTCCAGTAAGC.................................................................................................................................................................................................................................2142.00802020040000
.......................................................................................................................................AATTTTTGCAAAAATTGAATGCAGTGT.......................................................................................................2722.00400000040000
..............TATTTGACACAGGAAGTCCAGT.....................................................................................................................................................................................................................................2241.75702000050000
........................................................................................CTCAAAGA----AGTAAATACCATGGAAT....................................................................................................................................................2521.50301000020000
........................................................................................................................................ATTTTTGCAAAAATTGAATGCAGT.........................................................................................................2421.50301000020000
.........................................................................................................ATACCATGGAATAGGTGGAC............................................................................................................................................2021.50301000020000
..................TGACACAGGAAGTCCAGTAAGCT................................................................................................................................................................................................................................2341.50600000060000
.......................................................TTAGTTCCAAATAATGTTA...............................................................................................................................................................................................1921.50303000000000
..............................................................................................GA----AGTAAATACCATGGAATAGGT................................................................................................................................................2321.50300000030000
..............................................................................................................................................GCAAAAATTGAATGCAGTGT.......................................................................................................2021.50300000030000
........................................................................................................................................ATTTTTGCAAAAATTGAATGCA...........................................................................................................2221.50303000000000
.........................................................................................................ATACCATGGAATAGGTGGA.............................................................................................................................................1921.50300000030000
....................................................................................................................................................ATTGAATGCAGTGTATATTT.................................................................................................2021.50300000120000
......................................................................................................TAAATACCATGGAATAGGTGGACAACA........................................................................................................................................2721.50301100100000
................TTTGACACAGGAAGTCCAGT.....................................................................................................................................................................................................................................2041.50602000040000
.....................................................................................................................................................TTGAATGCAGTGTATATTTT-C..............................................................................................2121.50300000030000
.........................................................................................................................................................ATGCAGTGTATATTTT-CATAAAA........................................................................................2321.50302000010000
...................GACACAGGAAGTCCAGTAAGCTT...............................................................................................................................................................................................................................2341.50602000130000
......................................................TTTAGTTCCAAATAATGTTAAA-TT..........................................................................................................................................................................................2421.50301200000000
..................TGACACAGGAAGTCCAGTAAGC.................................................................................................................................................................................................................................2241.25500000050000
................TTTGACACAGGAAGTCCAGTAAGCTT...............................................................................................................................................................................................................................2641.25500000050000
...................................................................................................................................................AATTGAATGCAGTGTATATTTT-...............................................................................................2221.00200000020000
........................................................................................CTCAAAGA----AGTAAATACCATG........................................................................................................................................................2121.00201000010000
....................................................................................................................................................ATTGAATGCAGTGTATATTTT-CATAAAA........................................................................................2821.00200000020000
..............................................................................................GA----AGTAAATACCATGGAATAGGTGGA.............................................................................................................................................2621.00200000020000
...................................................................................................................ATAGGTGGACAACAAATATTAAT...............................................................................................................................2321.00202000000000
.....................................................................................................GTAAATACCATGGAATAGGTGGACAACA........................................................................................................................................2821.00201100000000
........................................................................................CTCAAAGA----AGTAAATACCATGGAATAG..................................................................................................................................................2721.00201000010000
.........................................................................AAA-TTAAA----ATCTCAAAGA----A....................................................................................................................................................................1921.00202000000000
.....................................................................................................GTAAATACCATGGAATAGGTGGA.............................................................................................................................................2321.00200000020000
....................................................................................................................................................ATTGAATGCAGTGTATATTTT-CATAAA.........................................................................................2721.00200000020000
...................................................................................................................................................AATTGAATGCAGTGTATATTTT-CAT............................................................................................2521.00200000020000
....................................................................................................................................................ATTGAATGCAGTGTATATTTT-C..............................................................................................2221.00200000020000
.......................................................................................................AAATACCATGGAATAGGTGG..............................................................................................................................................2021.00201000010000
........................................................................................................AATACCATGGAATAGGTGGA.............................................................................................................................................2021.00202000000000
........................................................................................................AATACCATGGAATAGGTGGACA...........................................................................................................................................2221.00200000020000
...................................................................................................................................................AATTGAATGCAGTGTATATT..................................................................................................2021.00200000020000
....................................................................................................................................................ATTGAATGCAGTGTATATT..................................................................................................1921.00201000010000
.........................................................................................TCAAAGA----AGTAAATACCATGGAATAGG.................................................................................................................................................2721.00202000000000
..................................................................................................................................................AAATTGAATGCAGTGTATAT...................................................................................................2021.00200000020000
.....................................................................................................................AGGTGGACAACAAATATTAATT..............................................................................................................................2221.00202000000000
.....................................................................................................GTAAATACCATGGAATAGGTGGAC............................................................................................................................................2421.00200000020000
........................................................................................CTCAAAGA----AGTAAATACCATGGAATAGGT................................................................................................................................................2921.00200000020000
...............................................................................................A----AGTAAATACCATGGAATAGGT................................................................................................................................................2221.00201000010000
......................................................................GTTAAA-TTAAA----ATCTCAAAGA----AGTAAA...............................................................................................................................................................2721.00202000000000
....................................................................................................................................ATTAATTTTTGCAAAAATTGAATGCAGT.........................................................................................................2821.00200000020000
..............................................................................................................ATGGAATAGGTGGACAACA........................................................................................................................................1921.00200000020000
...................................................................................................................................................AATTGAATGCAGTGTATATTTT-C..............................................................................................2321.00200000020000
.GTTTTAAGT---TTATTTGAC...................................................................................................................................................................................................................................................1860.83550000000000
....................ACACAGGAAGTCCAGTAAG..................................................................................................................................................................................................................................1940.75300000120000
........GT---TTATTTGACACAGGAAGTCCAGTAA...................................................................................................................................................................................................................................2740.75300000030000
..................TGACACAGGAAGTCCAGTAAGCTTT..............................................................................................................................................................................................................................2540.75303000000000
.................TTGACACAGGAAGTCCAGTAAGC.................................................................................................................................................................................................................................2340.75301000020000
..................TGACACAGGAAGTCCAGTAAGCTT...............................................................................................................................................................................................................................2440.75300000030000
.................TTGACACAGGAAGTCCAGTAAGCTT...............................................................................................................................................................................................................................2540.75300000030000
......................ACAGGAAGTCCAGTAAGCTTTA.............................................................................................................................................................................................................................2240.75300000120000
.....................CACAGGAAGTCCAGTAAGCTTTATT...........................................................................................................................................................................................................................2540.75300100020000
...........................................................................................................................................TTTGCAAAAATTGAATGCAGTGT.......................................................................................................2320.50100000010000
............................................................................................................CCATGGAATAGGTGGACA...........................................................................................................................................1820.50100000100000
.........................................................................................TCAAAGA----AGTAAATACCATGGAATA...................................................................................................................................................2520.50100000000001
...............................................................................................A----AGTAAATACCATGGAATAGGTGGAC............................................................................................................................................2620.50101000000000
....................................................TCTTTAGTTCCAAATAATGTTAAA-............................................................................................................................................................................................2420.50101000000000
..................TGACACAGGAAGTCCAGTAAGCTTTATT...........................................................................................................................................................................................................................2840.50200000020000
..........................................................................................................................................TTTTGCAAAAATTGAATGCAGT.........................................................................................................2220.50100000010000
.....................CACAGGAAGTCCAGTAAGCTTTATTCAAAA......................................................................................................................................................................................................................3040.50200000020000
....................................................................................................................................................ATTGAATGCAGTGTATATTTT-CAT............................................................................................2420.50100000010000
........................................................................................................................................ATTTTTGCAAAAATTGAATGCAGTGT.......................................................................................................2620.50100000010000
........................................................................................................................TGGACAACAAATATTAATTTTTGCAAA......................................................................................................................2720.50101000000000
......................................................................................................TAAATACCATGGAATAGG.................................................................................................................................................1820.50100000100000
................................................................................................................................................AAAAATTGAATGCAGTGTAT.....................................................................................................2020.50100000010000
.......................................................................................................................................AATTTTTGCAAAAATTGAATGCA...........................................................................................................2320.50101000000000
............................................................................................................................................TTGCAAAAATTGAATGCAGT.........................................................................................................2020.50100000010000
..................TGACACAGGAAGTCCAGTAAG..................................................................................................................................................................................................................................2140.50200000020000
.....................................................................................................................AGGTGGACAACAAATATT..................................................................................................................................1820.50101000000000
TGTTTTAAGT---TTATTTGACACAGGAAG...........................................................................................................................................................................................................................................2740.50211000000000
..........................................................................................CAAAGA----AGTAAATACCATGGAATAG..................................................................................................................................................2520.50101000000000
......................................................................................ATCTCAAAGA----AGTAAATACCAT.........................................................................................................................................................2220.50101000000000
...........................................................................A-TTAAA----ATCTCAAAGA----AGTAAA...............................................................................................................................................................2220.50101000000000
.........................................................................................................................GGACAACAAATATTAATTT.............................................................................................................................1920.50101000000000
...........................................................................................................ACCATGGAATAGGTGGACAACAAAT.....................................................................................................................................2520.50100000100000
.....................................................CTTTAGTTCCAAATAATGTTAAA-TTAAA----...................................................................................................................................................................................2820.50101000000000
.......................CAGGAAGTCCAGTAAGCTTTATTCAAA.......................................................................................................................................................................................................................2740.50220000000000
TGTTTTAAGT---TTATTTGACACAGGA.............................................................................................................................................................................................................................................2540.50200000000002
................................................................................................................GGAATAGGTGGACAACAAATATTAAT...............................................................................................................................2620.50101000000000
..............................................................................................................ATGGAATAGGTGGACAACAAATATT..................................................................................................................................2520.50100000010000
.........................................................................................................ATACCATGGAATAGGTGGACAACAAA......................................................................................................................................2620.50100000100000
......................................................................................................TAAATACCATGGAATAGGTGG..............................................................................................................................................2120.50101000000000
.............................................................................................AGA----AGTAAATACCATGGAATAGGTGG..............................................................................................................................................2620.50100000100000
.....................................................CTTTAGTTCCAAATAATGT.................................................................................................................................................................................................1920.50101000000000
...........................................................................................................ACCATGGAATAGGTGGACAAC.........................................................................................................................................2120.50100000010000
..............................................................................................................ATGGAATAGGTGGACAAC.........................................................................................................................................1820.50110000000000
...................................................................................................................ATAGGTGGACAACAAATATTAATTT.............................................................................................................................2520.50101000000000
................................................................................................................................................AAAAATTGAATGCAGTGT.......................................................................................................1820.50100000010000
................................................................................................................................................AAAAATTGAATGCAGTGTATATTTT-C..............................................................................................2620.50100000100000
.......................................................................................................AAATACCATGGAATAGGTGGACA...........................................................................................................................................2320.50101000000000
...............................................................................................................................................CAAAAATTGAATGCAGTGT.......................................................................................................1920.50100000010000
.......................................................................................TCTCAAAGA----AGTAAATACCATGGA......................................................................................................................................................2420.50101000000000
.............................................................................TTAAA----ATCTCAAAGA----AGTAAA...............................................................................................................................................................2120.50100000010000
........................................................................TAAA-TTAAA----ATCTCAAAGA----AGT..................................................................................................................................................................2220.50100000010000
.....................................................................................................................AGGTGGACAACAAATATTAAT...............................................................................................................................2120.50110000000000
...........................................................................................AAAGA----AGTAAATACCATGGAATAG..................................................................................................................................................2420.50101000000000
...................................................ATCTTTAGTTCCAAATAATGTTAAA-T...........................................................................................................................................................................................2620.50101000000000
................TTTGACACAGGAAGTCCAGTA....................................................................................................................................................................................................................................2140.50200000020000
.......................................................................................................AAATACCATGGAATAGGTG...............................................................................................................................................1920.50100000100000
.........................................................................................................ATACCATGGAATAGGTGGACA...........................................................................................................................................2120.50101000000000
......................................................................................................................................................TGAATGCAGTGTATATTTT-CATAAAAA.......................................................................................2720.50101000000000
................................................................................................................................................AAAAATTGAATGCAGTGTATATTTT-CATAA..........................................................................................3020.50100000010000
.......................................................................................................................................................GAATGCAGTGTATATTTT-C..............................................................................................1920.50101000000000
...........................................................................................AAAGA----AGTAAATACCATGGA......................................................................................................................................................2020.50100100000000
.....................................................................................................................................................TTGAATGCAGTGTATATTTT-CATAA..........................................................................................2520.50100000010000
.........................................................................................................................................................ATGCAGTGTATATTTT-CATAAAAA.......................................................................................2420.50101000000000
.....TAAGT---TTATTTGACACAGGAAG...........................................................................................................................................................................................................................................2240.50201100000000
..........................................................GTTCCAAATAATGTTAAA-TTA.........................................................................................................................................................................................2120.50101000000000
..............................................................................................................ATGGAATAGGTGGACAACAAA......................................................................................................................................2120.50101000000000
.............................................TCAAAAATCTTTAGTTCCAAATAATGTT................................................................................................................................................................................................2820.50101000000000
....................................................................................................................................................ATTGAATGCAGTGTATATTTC-...............................................................................................2120.50100000010000
................................................................................................................................................AAAAATTGAATGCAGTGTATATT..................................................................................................2320.50100000010000
.............................................................................................................CATGGAATAGGTGGACAACAAATATT..................................................................................................................................2620.50100000010000
........................................................TAGTTCCAAATAATGTTAAA-TT..........................................................................................................................................................................................2220.50101000000000
................................................................................................................................................AAAAATTGAATGCAGTGTA......................................................................................................1920.50100000010000
.....................CACAGGAAGTCCAGTAAGCTTTATTCAAA.......................................................................................................................................................................................................................2940.50200000020000
.GTTTTAAGT---TTATTTGACACAGGAAGT..........................................................................................................................................................................................................................................2740.50201000010000
.................................................................................................................................................AAAATTGAATGCAGTGTATAT...................................................................................................2120.50100000010000
..............................................................................TAAA----ATCTCAAAGA----AGTAAATACCATGG.......................................................................................................................................................2820.50101000000000
......................................................................GTTAAA-TTAAA----ATCTCAAAG..........................................................................................................................................................................2020.50101000000000
........................................................................................................................................................................................................................CGAGGATCTCGCCTCTCACCC............................2120.50101000000000
.........................................................................................................................................TTTTTGCAAAAATTGAATGCAGT.........................................................................................................2320.50100000010000
..........................................................................................................TACCATGGAATAGGTGGACAACAAATATC..................................................................................................................................2920.50100000010000
.........................................................................................................ATACCATGGAATAGGTGGACAAC.........................................................................................................................................2320.50100100000000
....................................................................................................AGTAAATACCATGGAATAG..................................................................................................................................................1920.50100000010000
........................................................................................................AATACCATGGAATAGGTGGAC............................................................................................................................................2120.50101000000000
.....................................................................................................GTAAATACCATGGAATAGGTGGACA...........................................................................................................................................2520.50100000010000
.................................................................................A----ATCTCAAAGA----AGTAAATACCAT.........................................................................................................................................................2320.50101000000000
.......................................................................................................AAATACCATGGAATAGGTGGACAAC.........................................................................................................................................2520.50101000000000
...............ATTTGACACAGGAAGTCCAGTAAGCT................................................................................................................................................................................................................................2640.50201000010000
....................ACACAGGAAGTCCAGTAAGCTTTATT...........................................................................................................................................................................................................................2640.50201000010000
.........................................................................................................ATACCATGGAATAGGTGG..............................................................................................................................................1820.50101000000000
......................................................................................ATCTCAAAGA----AGTAAATACCATGGA......................................................................................................................................................2520.50100000010000
...............................................................................................................................................CAAAAATTGAATGCAGTGTA......................................................................................................2020.50100000010000
.......AGT---TTATTTGACACAGGAAGTCCAGTAA...................................................................................................................................................................................................................................2840.50200000020000
...........................................................................................AAAGA----AGTAAATACCATGGAATAGGTGT..............................................................................................................................................2820.50101000000000
...................................................................AATGTTAAA-TTAAA----ATCTCA.............................................................................................................................................................................2020.50101000000000
...............................................................................................................................................CAAAAATTGAATGCAGTGTATAT...................................................................................................2320.50100000010000
..............TATTTGACACAGGAAGTCCAGTAAGCT................................................................................................................................................................................................................................2740.50201000010000
....................................................................................................................................................ATTGAATGCAGTGTATATTTT-CATA...........................................................................................2520.50101000000000
.......AGT---TTATTTGACACAGGAAGTCC........................................................................................................................................................................................................................................2340.50200100010000
................................................................................................................................................AAAAATTGAATGCAGTGTATATTTT-...............................................................................................2520.50101000000000
.......AGT---TTATTTGACACAGGAAGTCCAGT.....................................................................................................................................................................................................................................2640.50200000020000
.....................................................................................................GTAAATACCATGGAATAGG.................................................................................................................................................1920.50101000000000
.............................................................................................................CATGGAATAGGTGGACAACAA.......................................................................................................................................2120.50101000000000
......................................................TTTAGTTCCAAATAATGTTAAA-............................................................................................................................................................................................2220.50101000000000
...........................................................................................AAAGA----AGTAAATACCATGGAATAGGTGGA.............................................................................................................................................2920.50100000010000
..................................................................................................................AATAGGTGGACAACAAATATTAATTTTTG..........................................................................................................................2920.50110000000000
................................................................................................................................................AAAAATTGAATGCAGTGTATAT...................................................................................................2220.50100000010000
...................................................................................................................................TATTAATTTTTGCAAAAAT...................................................................................................................1920.50101000000000
.......................................................................................................AAATACCATGGAATAGGTGGA.............................................................................................................................................2120.50100000010000
...............................................................................................................................CAAATATTAATTTTTGCAA.......................................................................................................................1920.50101000000000
..........................................................................................................TACCATGGAATAGGTGGACA...........................................................................................................................................2020.50100000010000
.......................................................TTAGTTCCAAATAATGTTAAA-TT..........................................................................................................................................................................................2320.50101000000000
........................................................................................................................................ATTTTTGCAAAAATTGAATGC............................................................................................................2120.50101000000000
..........................................................................................................TACCATGGAATAGGTGGACAACAAATATT..................................................................................................................................2920.50100000010000
......................................................................GTTAAA-TTAAA----ATCTCAAAGA----A....................................................................................................................................................................2220.50100000010000
...................GACACAGGAAGTCCAGTAAG..................................................................................................................................................................................................................................2040.50200000020000
.................................................................................................................................................AAAATTGAATGCAGTGTATATT..................................................................................................2220.50101000000000
................................................................................................................GGAATAGGTGGACAACAAATATTAATTT.............................................................................................................................2820.50101000000000
............................................................................................AAGA----AGTAAATACCATGGAATAGG.................................................................................................................................................2420.50101000000000
.........................................................................................................................................................ATGCAGTGTATATTTT-CA.............................................................................................1820.50101000000000
...........................................................................................................................................TTTGCAAAAATTGAATGC............................................................................................................1820.50101000000000
................................................AAAATCTTTAGTTCCAAATAATGTTA...............................................................................................................................................................................................2620.50101000000000
.......................................................................................................AAATACCATGGAATAGGTGGACAACAAA......................................................................................................................................2820.50101000000000
........................................................................................................AATACCATGGAATAGGTGG..............................................................................................................................................1920.50100000010000
..............................................................................TAAA----ATCTCAAAGA----AGTAAA...............................................................................................................................................................2020.50101000000000
.........................................................................AAA-TTAAA----ATCTCAAAGA----AGTAAATACC...........................................................................................................................................................2820.50101000000000
.......AGT---TTATTTGACACAGGAAGT..........................................................................................................................................................................................................................................2140.50200000020000
..........................................................................................................................................TTTTGCAAAAATTGAATGCAGTGT.......................................................................................................2420.50100000010000
....................................................TCTTTAGTTCCAAATAATGTTAAA-TTA.........................................................................................................................................................................................2720.50101000000000
............................AGTCCAGTAAGCTTTATTCAAA.......................................................................................................................................................................................................................2240.50202000000000
.................................................................................................................................................AAAATTGAATGCAGTGTATATTTT-...............................................................................................2420.50100000010000
.............................................................................................................CATGGAATAGGTGGACAACAAATAT...................................................................................................................................2520.50101000000000
...............................................................................................................................................CAAAAATTGAATGCAGTGTATA....................................................................................................2220.50100000010000
..............TATTTGACACAGGAAGTCCA.......................................................................................................................................................................................................................................2040.50201000010000
........................................................................................CTCAAAGA----AGTAAATACCATGGAATA...................................................................................................................................................2620.50101000000000
...............................................................................................A----AGTAAATACCATGGAATAGG.................................................................................................................................................2120.50101000000000
.............................................................................................................CATGGAATAGGTGGACAACAAATA....................................................................................................................................2420.50100000010000
............................................................................................AAGA----AGTAAATACCATGGAATAGGTG...............................................................................................................................................2620.50101000000000
.............................................................................TTAAA----ATCTCAAAGA----AGTAAAT..............................................................................................................................................................2220.50100000010000
.........................................................................................................................................................ATGCAGTGTATATTTT-CATAA..........................................................................................2120.50100000010000
......................................................................................ATCTCAAAGA----AGTAAATACCATG........................................................................................................................................................2320.50101000000000
..................................................................................................................................................AAATTGAATGCAGTGTATATTTT-C..............................................................................................2420.50100000010000
.................TTGACACAGGAAGTCCAGTAAGCT................................................................................................................................................................................................................................2440.50202000000000
.................................................................................A----ATCTCAAAGA----AGTAAATACCATGGA......................................................................................................................................................2620.50101000000000
....................................................................................................AGTAAATACCATGGAATAGGA................................................................................................................................................2120.50100000010000
......................................................................................................................................................TGAATGCAGTGTATATTTT-CATAAAA........................................................................................2620.50100000010000
.................................................................................................................................................AAAATTGAATGCAGTGTAT.....................................................................................................1920.50100000010000
..........................................................................................CAAAGA----AGTAAATACCATGGAATAGG.................................................................................................................................................2620.50101000000000
...............................................................................................................TGGAATAGGTGGACAACAAATATTAATT..............................................................................................................................2820.50100000010000
......................................................................GTTAAA-TTAAA----ATCTCAAAGA----AGTAAAT..............................................................................................................................................................2820.50100000010000
.....................CACAGGAAGTCCAGTAAGCTTTATTC..........................................................................................................................................................................................................................2640.50202000000000
..........................................................................AA-TTAAA----ATCTCAAAGA----AGT..................................................................................................................................................................2020.50100000010000
..............................................................................................GA----AGTAAATACCATGGAATAGGTGGAC............................................................................................................................................2720.50100000010000
.................................................................................................................................AATATTAATTTTTGCAAAAATTGAAT..............................................................................................................2620.50101000000000
.........................................................................................................ATACCATGGAATAGGTGGACAACAAAT.....................................................................................................................................2720.50101000000000
...................................................ATCTTTAGTTCCAAATAATGTTAAA-TT..........................................................................................................................................................................................2720.50101000000000
......................................................................................................TAAATACCATGGAATAGGTGGA.............................................................................................................................................2220.50100000100000
..............................................................................................................ATGGAATAGGTGGACAACAAATATTAA................................................................................................................................2720.50100000010000
...............................................................................................A----AGTAAATACCATGGAATAGGTGGACAA..........................................................................................................................................2820.50100000100000
................................CAGTAAGCTTTATTCAAAAATC...................................................................................................................................................................................................................2240.50201100000000
..........................................................................................................TACCATGGAATAGGTGGAC............................................................................................................................................1920.50100000010000
................................................AAAATCTTTAGTTCCAAATAATGTTAAA-T...........................................................................................................................................................................................2920.50101000000000
.............................................................................................................CATGGAATAGGTGGACAACAAAT.....................................................................................................................................2320.50100000010000
.................................................................................................................................................AAAATTGAATGCAGTGTATATTTT-C..............................................................................................2520.50101000000000
.......................................................................TTAAA-TTAAA----ATCTCAAAGA----AGT..................................................................................................................................................................2320.50101000000000
..........................................................................................CAAAGA----AGTAAATACCATGGAAT....................................................................................................................................................2320.50100000010000
.................................................................................A----ATCTCAAAGA----AGTAAATACCATGG.......................................................................................................................................................2520.50101000000000
.............................................................................................................CATGGAATAGGTGGACAACAAATATTAA................................................................................................................................2820.50100000010000
.......AGT---TTATTTGACACAGGAAG...........................................................................................................................................................................................................................................2040.50211000000000
..........................................TATTCAAAAATCTTTAGTTCCAAATAA....................................................................................................................................................................................................2730.33101000000000
......................................GCTTTATTCAAAAATCTTTAGTTCCAAA.......................................................................................................................................................................................................2830.33101000000000
............................................................................................AAGA----AGTAAATACCATGGAATA...................................................................................................................................................2230.33100000010000
.................................AGTAAGCTTTATTCAAAAATCT..................................................................................................................................................................................................................2240.25101000000000
...TTTAAGT---TTATTTGACACAGGAAGTCC........................................................................................................................................................................................................................................2740.25100000010000
.............................GTCCAGTAAGCTTTATTCAAAAA.....................................................................................................................................................................................................................2340.25101000000000
.....................................AGCTTTATTCAAAAATCTTTAGTTCC..........................................................................................................................................................................................................2640.25101000000000
............................AGTCCAGTAAGCTTTATTCAAAAATCTT.................................................................................................................................................................................................................2840.25101000000000
.......................CAGGAAGTCCAGTAAGCTT...............................................................................................................................................................................................................................1940.25100000010000
...TTTAAGT---TTATTTGACACAGGAAGTCCA.......................................................................................................................................................................................................................................2840.25100000010000
.............TTATTTGACACAGGAAGTCCA.......................................................................................................................................................................................................................................2140.25100000010000
......................................GCTTTATTCAAAAATCTTTAGTT............................................................................................................................................................................................................2340.25100000010000
.................TTGACACAGGAAGTCCAGT.....................................................................................................................................................................................................................................1940.25101000000000
.................TTGACACAGGAAGTCCAGTAAGCTTTA.............................................................................................................................................................................................................................2740.25100000010000
..........................................TATTCAAAAATCTTTAGTTCC..........................................................................................................................................................................................................2140.25100000010000
......AAGT---TTATTTGACACAGGAAGTCCAGTA....................................................................................................................................................................................................................................2840.25100000010000
.......AGT---TTATTTGACACAGGAAGTCCAGTAAG..................................................................................................................................................................................................................................2940.25100000010000
..............................TCCAGTAAGCTTTATTCAAAAATC...................................................................................................................................................................................................................2440.25101000000000
.................TTGACACAGGAAGTCCAGTAAGCTTTAC............................................................................................................................................................................................................................2840.25100100000000
................TTTGACACAGGAAGTCCAGTAA...................................................................................................................................................................................................................................2240.25100000010000
.........................................TTATTCAAAAATCTTTAGTTCCA.........................................................................................................................................................................................................2340.25101000000000
.............TTATTTGACACAGGAAGTCCAGTAAGC.................................................................................................................................................................................................................................2740.25101000000000
...TTTAAGT---TTATTTGACACAGGAAGT..........................................................................................................................................................................................................................................2540.25100000010000
....TTAAGT---TTATTTGACACAGGAAGTCCA.......................................................................................................................................................................................................................................2740.25100000010000
.............................GTCCAGTAAGCTTTATTCAAAAAT....................................................................................................................................................................................................................2440.25101000000000
...................GACACAGGAAGTCCAGTA....................................................................................................................................................................................................................................1840.25101000000000
..TTTTAAGT---TTATTTGACACAGGAAGTCC........................................................................................................................................................................................................................................2840.25100000010000
................TTTGACACAGGAAGTCCAGTAAGCTTTA.............................................................................................................................................................................................................................2840.25101000000000
TGTTTTAAGT---TTATTTGAC...................................................................................................................................................................................................................................................1940.25101000000000
..................TGACACAGGAAGTCCAGTA....................................................................................................................................................................................................................................1940.25100000010000
...............ATTTGACACAGGAAGTCCAGTAAGCTT...............................................................................................................................................................................................................................2740.25100000010000
............................AGTCCAGTAAGCTTTATTCAAAA......................................................................................................................................................................................................................2340.25101000000000
......AAGT---TTATTTGACACAGGAAGTCCA.......................................................................................................................................................................................................................................2540.25100000010000
....TTAAGT---TTATTTGACACAGGAAGTCCAGTA....................................................................................................................................................................................................................................3040.25100000010000
...................GACACAGGAAGTCCAGTAAGCTTTATT...........................................................................................................................................................................................................................2740.25101000000000
.....................CACAGGAAGTCCAGTAAGCTTTATTCAA........................................................................................................................................................................................................................2840.25100000010000
.........................................TTATTCAAAAATCTTTAGTTCCAA........................................................................................................................................................................................................2440.25100000100000
..............................TCCAGTAAGCTTTATTCAAAAAT....................................................................................................................................................................................................................2340.25101000000000
..TTTTAAGT---TTATTTGACACAGGA.............................................................................................................................................................................................................................................2340.25101000000000
.....................CACAGGAAGTCCAGTAAG..................................................................................................................................................................................................................................1840.25101000000000
..................TGACACAGGAAGTCCAGT.....................................................................................................................................................................................................................................1840.25101000000000
.........T---TTATTTGACACAGGAAGTCCAGTAAGC.................................................................................................................................................................................................................................2840.25100001000000
.GTTTTAAGT---TTATTTGACACAGGAAGTCC........................................................................................................................................................................................................................................2940.25100000010000
droEre2
TGTTTTAAGT---TTATTTGGCACAGGAAGTCCAGTAATTTTTATTCAAAAATCTTTAGTTCCAAATAATATTAGA-TTAAA----ACCGCAAAGA----AGTAAATACCAAGGAATAGGTGGTCAACAAATATTAATTTGTGCAAAAATTGAGTGCATTGTAAATTTT------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droSec2
TGTTTTAAGT---TTGTTCGACACAGGAAGTCCAGTTAGTTTTATTCAAAAATCTTAAGTTCCAAATAATATCAGA-TTAAA----ACCGTAAAGA----AGTAAATACCAT-------ACGGACAACAAACA----TTTTTGAAAGAATTTAGTGCATTGTATAT---------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droSim2
TGTTTTAAGT---TTGTTTGACACAGGAAGTCCAGTAAGTTTTATTCAAAAATCTTAAGTTCCAAATAATATCAGA-TTAAA----ACCGCAAAGA----AGTAAATACCATA-------CAGACAACAAACA----TTTTTGCAAGAATTTAGTGCATTGTATAT---------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
dm3
TGTTTTAAGT---T--------------------------TTTATTCAAAAAGCTTCAGTTCCAAATAATATGAAA-TTGAA----ACCGCAAAGA----TGTGAATACCACGGAATAGGTGGACCAAAAATATTAATTTTTGCAAAAATGGAGTGCATTTTTATTCGT-----AGAA---------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................TTTATTCAAAAAGCTTCAGT.............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................TTCAAAAAGCTTCAGTTCCAAATAATA..................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TGAATACCACGGAATAGGTGGC.............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.........T---T--------------------------TTTATTCAAAAAGCTTCAGTTCCAA........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................A-TTGAA----ACCGCAAAGA----TGTGAAT..............................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................TTTTGCAAAAATGGAGTGCATTTTT......................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................TATTCAAAAAGCTTCAGTTCC..........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AAATGGAGTGCATTTTTATTCGT-----A..........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................AAAGA----TGTGAATACCACGGAATAGGTG...............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ATTTTTGCAAAAATGGAGTGC............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................TAATATGAAA-TTGAA----ACCGCAAAGA----TGT..................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AATTTTTGCAAAAATGGAGTG.............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
CATTTTTGCG---TTACTAGATACCGGAAGCCCCGTGAGTTTTATTAGCAGAGGAGTTATTCCACAAGCAGTAAAG-GACGA-ACACCTAGTAAAG----AGCAGTTTTCGCGGCCTAAGCGGCCAAAATATTTTGACATTTGGAAAAATTAA----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TTCAAGCCGT---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTTTGCTCCCAAGCCGAGGATTTCGCCGCTTACCCAAGTGCAGCCCGATGCGGACTTGACGCTSizeHit CountTotal NormTotal
No Reads
droTak1
AGTAATGAATGTCCTTTTTGATACCGGCAGCCCGGTTAGCTTCATAAACAAGACGAAATTGCCAAGAGATGTAACG-TTAGC-CAACCCATTTGAG----AGTAAATACCGTGGAATATATGGAAGAAATATTATACTATGCGGCGCAGTTAAATGCTATATTAAGTTT-AATTTAAA---------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTCAAGCCGT---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTTTTGCCCCTAAGCCGAGGATCTCACCGCTGACCCAAGTGCAGGGTGATGCGGACTTGACGCTSizeHit CountTotal NormTotal
No Reads
droRho1
AGTTTATA-----------TGTACCGATAGTCCAGTAAGCTTTAGTAAGAAATCTTTTGTTCCAAAATATGTTAAT-TT---------------------------------------------------------CTTTTAGCAGAAATCGAATTCCTTATATATTCT-CACGAAAA---------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TGTTTTAAGT---TTGTTTGACACAGGAAGTCCAGTTAGCTTTATTCAAAAATCATTAATTCCAAATAACGTTAAA-TTTAA----ATCGCATAGA----AGCAAATACCACGGTATAGGTGGGCAACAAATATTAATTTTTGGAGAAATTAAATGCTGTATATATTTT-CATGATAA---------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGTTTTAAGT---CTTTTCGATACAGGGAGTCCAGTAAGTTTTATTCAAAAATCTTTAGTTCCAAATAATTTTAAG-TTGAA----TCCTCAGAGA----AGTAAATACCACGGAATAGGTGGACAACAAATATTAACTTTTGCAAAAATCGAATGTTATGTATACTTT-AATGAAAA---------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TTCAAGCCGT---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTATTCGCGCCCAAGCCTCGCATCTCGCCGTTAACCCAAGTCCAGGCGGAGGCAGAGTTGACCCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................TTCGCGCCCAAGCCTCGCATC.........................................2111.001100000
..........................................................................................................................................................................................................................................CCCAAGTCCAGGCGGAGGCAGAGT.......2411.001100000
droBip1
TTCAAGCCGT---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTATTCGCGCCCAAGCCACGCATCTCGCCGTTGACCCAAGTTCAGGCGGAAGCAGAGTTGACCCTSizeHit CountTotal NormTotal
No Reads
dp5
TATTTTTAGT---CTATTTGATACAGGTAGCCCAGTAAGTTTTATTCATAAGTCTTTGATACCGAAGTCGGCTATAGTTGAAG---CCTATAATGAAGTTAGGAAATACTATGGACTAGGAGGACAACCAATTCCCATATGGGGAAAATTTAAGTGCCATATTGAATTT-TGCACAAA---------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................AATGAAGTTAGGAAATACTATGG.......................................................................................................................................................23612.50750180001041150
...........................................................................................AATGAAGTTAGGAAATACTATGGAC.....................................................................................................................................................25612.50750190000231230
................................................................................................AGTTAGGAAATACTATGGACTAGG.................................................................................................................................................2459.404704311100010
.................................................AAGTCTTTGATACCGAAGTCGGCTA...............................................................................................................................................................................................2577.5753014000003360
.................................................AAGTCTTTGATACCGAAGTCGGC.................................................................................................................................................................................................2376.86480260000011110
................................................................................................AGTTAGGAAATACTATGGACTAGGA................................................................................................................................................2556.203103000100000
...........................................................................................AATGAAGTTAGGAAATACTATGGA......................................................................................................................................................2465.1731012000011170
................................................TAAGTCTTTGATACCGAAGTCGGCTA...............................................................................................................................................................................................2674.4331010000014160
.................................................AAGTCTTTGATACCGAAGTCGGCT................................................................................................................................................................................................2473.712621700001510
................................................................................................AGTTAGGAAATACTATGGACTAG..................................................................................................................................................2353.601801600101000
.................................................AAGTCTTTGATACCGAAGTCGG..................................................................................................................................................................................................2272.001401000000310
...................................................GTCTTTGATACCGAAGTCGGCTATAG............................................................................................................................................................................................2671.86130200100640
..................................................................................................TTAGGAAATACTATGGACTAGGAGG..............................................................................................................................................2551.8090100000710
..........................................................................................................TACTATGGACTAGGAGGACAACCAAT.....................................................................................................................................2661.67100000000460
..........................................................................................TAATGAAGTTAGGAAATACTATGGAC.....................................................................................................................................................2661.5090200000160
...............................................................................................AAGTTAGGAAATACTATGGACTAGG.................................................................................................................................................2551.4070500000200
.................................................AAGTCTTTGATACCGAAGTCG...................................................................................................................................................................................................2171.2990900000000
................................................................................................AGTTAGGAAATACTATGGAC.....................................................................................................................................................2061.1770510100000
....................................................................................................................TAGGAGGACAACCAATTCCCATATGG...........................................................................................................................2661.1770610000000
.................................................................................................GTTAGGAAATACTATGGACTAGG.................................................................................................................................................2351.0050500000000
...............................................................................................AAGTTAGGAAATACTATGGACTAG..................................................................................................................................................2451.0050100000040
....................................................................................................................TAGGAGGACAACCAATTCCCATATG............................................................................................................................2561.0060100000140
.............CTATTTGATACAGGTAGCCCAGT.....................................................................................................................................................................................................................................2311.0010100000000
...........................................................................................AATGAAGTTAGGAAATACTATG........................................................................................................................................................2261.0060300000300
...................................................................................................TAGGAAATACTATGGACTAGGAGGAC............................................................................................................................................2651.0050000001040
................................................................................................AGTTAGGAAATACTATGGACTAGGAG...............................................................................................................................................2651.0050500000000
................................................................................................AGTTAGGAAATACTATGGACTA...................................................................................................................................................2260.8350300200000
.........................................TTATTCATAAGTCTTTGATACCGAAG......................................................................................................................................................................................................2660.8350100000040
....................................................................................................................TAGGAGGACAACCAATTCCCATAT.............................................................................................................................2460.8350500000000
..................................................................................................TTAGGAAATACTATGGACTAGGAG...............................................................................................................................................2450.8040400000000
...............................................................................................AAGTTAGGAAATACTATGGACTAGGA................................................................................................................................................2650.8040100000030
.................................................................................................GTTAGGAAATACTATGGACTAGGA................................................................................................................................................2450.8040400000000
...........................................................................................AATGAAGTTAGGAAATACTATGGACA....................................................................................................................................................2670.7150000000500
................................................TAAGTCTTTGATACCGAAGTCGGC.................................................................................................................................................................................................2470.7150100000310
..........................................................................................................................................ATGGGGAAAATTTAAGTG.............................................................................................................1870.7150500000000
.............................................................................................TGAAGTTAGGAAATACTATGGACTA...................................................................................................................................................2560.6740000000400
................................................................................................AGTTAGGAAATACTATGGACT....................................................................................................................................................2160.6740400000000
.......................................................TTGATACCGAAGTCGGCTATAG............................................................................................................................................................................................2280.6350000000500
.....................................................................................................GGAAATACTATGGACTAGGAGG..............................................................................................................................................2250.6030100000200
................................................................................................AGTTAGGAAATACTATGGACTAGGAGG..............................................................................................................................................2750.6030210000000
..................................................................................................TTAGGAAATACTATGGACTAGGA................................................................................................................................................2350.6030100000020
...................................................................................................TAGGAAATACTATGGACTAGGAGGACA...........................................................................................................................................2750.6030000000030
..............................................................................TGAAG---CCTATAATGAAGTTAGGAAA...............................................................................................................................................................2550.6030000000030
...................................................................................................TAGGAAATACTATGGACTAGGAGGA.............................................................................................................................................2550.6030000000120
...................................................................................................TAGGAAATACTATGGACTAGG.................................................................................................................................................2150.6030000010200
.............................................................................................TGAAGTTAGGAAATACTATGGACTAGG.................................................................................................................................................2750.6030000000030
.........................................TTATTCATAAGTCTTTGATACCG.........................................................................................................................................................................................................2370.5740100000030
...............................................................................................AAGTTAGGAAATACTATGGACTA...................................................................................................................................................2360.5030110000010
.......................................................TTGATACCGAAGTCGGCTATAGTT..........................................................................................................................................................................................2480.5040100000300
............................................................................................................CTATGGACTAGGAGGACAACCA.......................................................................................................................................2260.5030000000030
...............................................................................................AAGTTAGGAAATACTATGGAC.....................................................................................................................................................2160.5030200000100
.............................................................................................................TATGGACTAGGAGGACAACCAATTCC..................................................................................................................................2660.5030000000030
.....................................................CTTTGATACCGAAGTCGGCTATAGT...........................................................................................................................................................................................2580.5040000000400
...........................................................TACCGAAGTCGGCTATAGTTGAAG---CCT................................................................................................................................................................................2760.5030200000010
...........................................................TACCGAAGTCGGCTATAGTTGAAG---...................................................................................................................................................................................2470.4330000000120
................................................TAAGTCTTTGATACCGAAGTCGGCT................................................................................................................................................................................................2570.4330000000120
...................................................GTCTTTGATACCGAAGTCGGC.................................................................................................................................................................................................2170.4330300000000
.................................................................................................GTTAGGAAATACTATGGACTAG..................................................................................................................................................2250.4020200000000
..................................................................................................TTAGGAAATACTATGGACTAGGAGGA.............................................................................................................................................2650.4020000000020
.................................................................................................GTTAGGAAATACTATGGACTAGGAG...............................................................................................................................................2550.4020200000000
...........................................................................................AATGAAGTTAGGAAATACTAT.........................................................................................................................................................2160.3320100001000
.............................................................................................TGAAGTTAGGAAATACTATGGAC.....................................................................................................................................................2360.3320000000110
..........................................................................................TAATGAAGTTAGGAAATACTATGGA......................................................................................................................................................2560.3320000000200
......................................................................................................................GGAGGACAACCAATTCCCATATGGGGAA.......................................................................................................................2860.3320000000020
.................................................................................................GTTAGGAAATACTATGGACTA...................................................................................................................................................2160.3320200000000
........................................................................................TATAATGAAGTTAGGAAATACTATGGA......................................................................................................................................................2760.3320100000010
............................................................................................ATGAAGTTAGGAAATACTATGGAC.....................................................................................................................................................2460.3320200000000
.............................................................................................................TATGGACTAGGAGGACAACCAAT.....................................................................................................................................2360.3320100000100
.............................................................................................................TATGGACTAGGAGGACAACCAATT....................................................................................................................................2460.3320000000200
................................................TAAGTCTTTGATACCGAAGTCGGCTATAG............................................................................................................................................................................................2970.2920000000020
........................................................................................................................AGGACAACCAATTCCCATATGGGGT........................................................................................................................2570.2920000000200
.................................................AAGTCTTTGATACCGAAGTCGGCTAT..............................................................................................................................................................................................2670.2920100000010
.................................................AAGTCTTTGATACCGAAGTC....................................................................................................................................................................................................2070.2920200000000
.................................................AAGTCTTTGATACCGAAGTCGGCTAA..............................................................................................................................................................................................2670.2920100000100
..................................................AGTCTTTGATACCGAAGTCGGC.................................................................................................................................................................................................2270.2920200000000
...................................................GTCTTTGATACCGAAGTCGGCTAT..............................................................................................................................................................................................2470.2920100001000
........................................................TGATACCGAAGTCGGCTATAGTTGA........................................................................................................................................................................................2570.2920200000000
.......................................................TTGATACCGAAGTCGGCTATAGTTGAA.......................................................................................................................................................................................2770.2920000001010
...................................................GTCTTTGATACCGAAGTCGGCTATAGT...........................................................................................................................................................................................2770.2920000000200
.................................................AAGTCTTTGATACCGAAAA.....................................................................................................................................................................................................1980.2520200000000
.....................................................................................................GGAAATACTATGGACTAGGAGGAC............................................................................................................................................2450.2010100000000
................................................................................................AGTTAGGAAATACTATGGACTAGGAGGA.............................................................................................................................................2850.2010010000000
...................................................................................................TAGGAAATACTATGGACTAG..................................................................................................................................................2050.2010100000000
...................................................................................................TAGGAAATACTATGGACTAGGAAA..............................................................................................................................................2450.2010000000010
.............................................................................................TGAAGTTAGGAAATACTATGGACTAG..................................................................................................................................................2650.2010000000100
................................................................................................AGTTAGGAAATACTATGGACTAGA.................................................................................................................................................2450.2010100000000
...................................................................................................TAGGAAATACTATGGACTAGGAGA..............................................................................................................................................2450.2010000000100
...................................................................................................TAGGAAATACTATGGACTAGGAGG..............................................................................................................................................2450.2010100000000
..............................................................................................GAAGTTAGGAAATACTATGGACTAGG.................................................................................................................................................2650.2010000000010
..................................................................................................TTAGGAAATACTATGGACTAGGAGGAC............................................................................................................................................2750.2010000000010
.........................................TTATTCATAAGTCTTTGATACCGA........................................................................................................................................................................................................2460.1710000000010
....................................................................................................................TAGGAGGACAACCAATTCCCATA..............................................................................................................................2360.1710100000000
..........................................................................................................TACTATGGACTAGGAGGACAACC........................................................................................................................................2360.1710000000010
...........................................................................................AATGAAGTTAGGAAATACTATGGACT....................................................................................................................................................2660.1710000000100
..............................................CATAAGTCTTTGATACCGAAGT.....................................................................................................................................................................................................2260.1710100000000
...........................................................................................AATGAAGTTAGGAAATACTATGGACTT...................................................................................................................................................2760.1710000000100
............................................................................................................................................................CCATATTGAATTT-TGCACAAA---------------------------------------------------------------------------------------2160.1710100000000
.............................................................................................................TATGGACTAGGAGGACAACCAA......................................................................................................................................2260.1710000000010
...............................................................................................................TGGACTAGGAGGACAACCAATTCCCATAT.............................................................................................................................2960.1710100000000
........................................................................................TATAATGAAGTTAGGAAATACTATGG.......................................................................................................................................................2660.1710000000010
...TTTTAGT---CTATTTGATACAGGTAGCCC........................................................................................................................................................................................................................................2760.1710100000000
............................................................................................................................................................CCATATTGAATTT-TGCACAA........................................................................................2060.1710100000000
...TTTTAGT---CTATTTGATACAGGTA............................................................................................................................................................................................................................................2360.1710000000010
...............................................................................................................TGGACTAGGAGGACAACCAATT....................................................................................................................................2260.1710000001000
..............................................................................................GAAGTTAGGAAATACTATGGAC.....................................................................................................................................................2260.1710100000000
.........................................TTATTCATAAGTCTTTGATACCGAA.......................................................................................................................................................................................................2560.1710000000010
....................................................................................................................TAGGAGGACAACCAATTCCC.................................................................................................................................2060.1710100000000
.............................................................................................TGAAGTTAGGAAATACTATGG.......................................................................................................................................................2160.1710100000000
................................................................................................AGTTAGGAAATACTATGGA......................................................................................................................................................1960.1710100000000
...............................................................................................AAGTTAGGAAATACTATGGACT....................................................................................................................................................2260.1710000100000
...........................................................TACCGAAGTCGGCTATAGTTGAAG---CC.................................................................................................................................................................................2660.1710100000000
.............................................................................................TGAAGTTAGGAAATACTATGGA......................................................................................................................................................2260.1710100000000
.............................................................................................................TATGGACTAGGAGGACAACCAATTCCCA................................................................................................................................2860.1710000000010
..........................................................................................................TACTATGGACTAGGAGGACA...........................................................................................................................................2060.1710000000010
...............................................................................................................TGGACTAGGAGGACAACCAATTCCCA................................................................................................................................2660.1710000000010
.........................................................................................................ATACTATGGACTAGGAGGACAACCAAT.....................................................................................................................................2760.1710000001000
................................................................................................AGTTAGGAAATACTATGG.......................................................................................................................................................1860.1710100000000
.....................................................................................................................AGGAGGACAACCAATTCCCATATGG...........................................................................................................................2560.1710100000000
.....................................................................................................................AGGAGGACAACCAATTCCCATATGGGG.........................................................................................................................2760.1710100000000
............................................TTCATAAGTCTTTGATACCGAAGTCGGCTA...............................................................................................................................................................................................3060.1710000000010
....................................................................................................................TAGGAGGACAACCAATTCCCATATGGGGT........................................................................................................................2960.1710100000000
..........................................................................................................TACTATGGACTAGGAGGACC...........................................................................................................................................2060.1710000001000
.................................................................................................GTTAGGAAATACTATGGACT....................................................................................................................................................2060.1710100000000
.....................................................................................................................AGGAGGACAACCAATTCCCATATGT...........................................................................................................................2560.1710010000000
..........................................................................................................TACTATGGACTAGGAGGACAA..........................................................................................................................................2160.1710100000000
........................................................................................TATAATGAAGTTAGGAAATACTATGGAC.....................................................................................................................................................2860.1710000000010
..........................................................................................TAATGAAGTTAGGAAATACTATGGACTA...................................................................................................................................................2860.1710100000000
.......................................TTTTATTCATAAGTCTTTGATACCGAAG......................................................................................................................................................................................................2860.1710000000010
.............................................TCATAAGTCTTTGATACCGAAGTCGGC.................................................................................................................................................................................................2760.1710000000010
.ATTTTTAGT---CTATTTGATACA................................................................................................................................................................................................................................................2160.1710000100000
.........................................................................................................................GGACAACCAATTCCCATATGG...........................................................................................................................2170.1410100000000
.................................................AAGTCTTTGATACCGAAGTCGGA.................................................................................................................................................................................................2370.1410000000010
........................................................................................................................AGGACAACCAATTCCCATATG............................................................................................................................2170.1410100000000
.......................................................TTGATACCGAAGTCGGCTATAGTTGA........................................................................................................................................................................................2670.1410100000000
.........................................................................................................................................TATGGGGAAAATTTAAGTG.............................................................................................................1970.1410000000010
........................................................................................................................AGGACAACCAATTCCCATATGGG..........................................................................................................................2370.1410100000000
................................................TAAGTCTTTGATACCGAAGTCGGCTATA.............................................................................................................................................................................................2870.1410000000010
............................................................................................................................................................CCATATTGAATTT-TGCACA.........................................................................................1970.1410000000100
................................................TAAGTCTTTGATACCGAAGTCGGCTAT..............................................................................................................................................................................................2770.1410000000001
.......................................................................................................................................................AAGTGCCATATTGAATTT-TGCAC..........................................................................................2370.1410100000000
.................................................AAGTCTTTGATACCGAAGTCGGCC................................................................................................................................................................................................2470.1410010000000
..................................................AGTCTTTGATACCGAAGTCGGCTATA.............................................................................................................................................................................................2670.1410100000000
....TTTAGT---CTATTTGATACAGGTAGC..........................................................................................................................................................................................................................................2470.1410100000000
.................................................AAGTCTTTGATACCGAAGTCGGCTT...............................................................................................................................................................................................2570.1410100000000
...................................................GTCTTTGATACCGAAGTCGGCT................................................................................................................................................................................................2270.1410100000000
........................................................................................................................AGGACAACCAATTCCCATATGG...........................................................................................................................2270.1410100000000
.........................................................................................................................GGACAACCAATTCCCATATGGG..........................................................................................................................2270.1410100000000
.....................................................CTTTGATACCGAAGTCGGCTA...............................................................................................................................................................................................2180.1310000000100
.......................................................TTGATACCGAAGTCGGCTAT..............................................................................................................................................................................................2080.1310000100000
.......................................................TTGATACCGAAGTCGGCTATAGT...........................................................................................................................................................................................2380.1310000000010
....................................................TCTTTGATACCGAAGTCGGC.................................................................................................................................................................................................2080.1310100000000
.............................................................................................................TATGGACTAGGAGGACAACA........................................................................................................................................2080.1310000001000
droPer2
TATGTTTAGT---CTATTTGATACAGGTAGCCCTGTGAGTTTTATTCATAAGTCTTTGATACCGAAGTCGGCTATAGTTGAAG---TCTATAATGAAGTCAGGAAATATTATGGACTAGGAGGACAACGAATTTTCATATGAGGAAAATTTAAGTGCCATATCGAATTT-TGCACAAA---------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................AATGAAGTCAGGAAATATTATGGAC.....................................................................................................................................................2520.501010000
...................................................GTCTTTGATACCGAAGTCGGCT................................................................................................................................................................................................22150.132200000
...................................................GTCTTTGATACCGAAGTCGGCTAT..............................................................................................................................................................................................24150.132020000
...................................................GTCTTTGATACCGAAGTCGG..................................................................................................................................................................................................20150.071010000
.....................................................CTTTGATACCGAAGTCGGCTA...............................................................................................................................................................................................21170.061010000
droWil2
TATTTTTGCC---CTATTAGATTCCGGAAGCCCAGTAAGTTTTGCCAGTAGAGCGTTAATGCCGCATTTGCATTGC-GATAA----ATTAGTTAAA----AGATCTTTTCATGGGATGAGCGGTGGCTCTATTCTGACTTTTGGAGCAGTCAAATGTTTAGTTCTGTTTTGCTAAAAA---------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................TAGATTCCGGAAGCCCAGTAAGTTT...............................................................................................................................................................................................................................25200.15300030
...............................CCAGTAAGTTTTGCCAGTAGA.....................................................................................................................................................................................................................21200.05101000
droVir3
TGTTTTTTGT---TTATTCGATACGGGGAGTCCCGAAAGCTTTATTCATAAGGCATTAATACCACAAAATATAAAG-TTAAA----ATC-TGAAGC----AGTCAATACCATGGATTACGAGGACGGCCTATCCCAACATGGGGAAAGTTGAAATGCCGAATTAATTTT-CAT----A---------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....TTTGT---TTATTCGATACGGGGAGTCCC.......................................................................................................................................................................................................................................2620.501000000000000000000000000000001000000000000000000000000000000000
....TTTTGT---TTATTCGATACGGGGAGTCC........................................................................................................................................................................................................................................2620.501000000000000000000000000000001000000000000000000000000000000000
.....TTTGT---TTATTCGATACGGGGAGTCC........................................................................................................................................................................................................................................2520.501001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ACATGGGGAAAGTTGAAA...............................................................................................................1830.331000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................GCCTATCCCAACATGGGGAAAGTTG..................................................................................................................2530.331000000000000000000000000000000010000000000000000000000000000000
droMoj3
TTCAAGCCGT---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTTTGCGCCCAAGCCACGCATTTCGCCGCTGACTCAGGTGCAGGCTGACACTGAGCAGACGCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTCAAGCCGT---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATTTGCGCCCAAGCCGCGCATTTCACCACTGACCCAGGTGCAGGCGGATGCGGAGCAGACTTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:54 PM