ID:

dya_926

 Coordinate:

3R:3940633-3940759 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dyak\GE25600-cds]; CDS [Dyak\GE25600-cds]; exon [dyak_GLEANR_9217:1]; exon [dyak_GLEANR_9217:2]; intron [Dyak\GE25600-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------##################################################
CCCAGAAACTGGATAACTTTGACGCGAGCAACTCGCAAACCTATCCGATGGTATGTATACTCGTATGCCGGATAAAATTGATTGCTCAGTAATAATATCTATAAGTTCGTAACATGCGTCTGAGTTACAAAATTATAAGATCAAGAGGTAAAACACGTGCCATTTTCCACTTTTAAGCGTTATTTGGTCAACGATGAGTTTCAAACCGAGGGAAGTCCCATTTTCAT
**************************************************...((((.(((((.(((((((((......(((..............))).....)))))......)))).)))))))))...(((.(((...((((((((.......)))).))))...))).))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V120
male body		 M056
embryo
 V058
head
 V052
head
 M026
head
 V046
embryo
 GSM1528802
follicle cells
.....................................................................................................................................................................................................GTTTCAAGCCGATGGAAGT........... 19 2 3 14.33 43 36 4 0 1 1 1 0 0
.....................................................................................................................................................................................................GTTTCAAGCCGATGGAAGTT.......... 20 3 6 14.00 84 75 5 0 2 0 2 0 0
..................................................................................................................................................................................GTTATTTGGTCAACGATGAGT............................ 21 0 1 13.00 13 1 12 0 0 0 0 0 0
............ATAACTTTGACGCGAGCAACT.................................................................................................................................................................................................. 21 0 1 5.00 5 1 3 1 0 0 0 0 0
.....................................................................................................................................................................................................GTTTCAAGCCGATGGAAG............ 18 2 11 4.09 45 42 0 0 2 0 1 0 0
...........GATAACTTTGACGCGAGCAACT.................................................................................................................................................................................................. 22 0 1 4.00 4 1 3 0 0 0 0 0 0
....................................................................................................................................................................................TATTTGGTCAACGATGAGT............................ 19 0 1 4.00 4 1 3 0 0 0 0 0 0
.......................................................................................................................................................................................................TTCAAACCGAGGGAAGTCCCATT..... 23 0 1 3.00 3 1 2 0 0 0 0 0 0
.............................................................................................................................................................................GATGCGTTATTTGGTCAACGATGAGT............................ 26 2 1 3.00 3 0 3 0 0 0 0 0 0
.......................................................................................................................................................................................................TTCAAACCGAGGGAAGTCCC........ 20 0 1 3.00 3 3 0 0 0 0 0 0 0
..............AACTTTGACGCGAGCAACTCG................................................................................................................................................................................................ 21 0 1 3.00 3 0 1 1 1 0 0 0 0
............ATAACTTTGACGCGAGCAACTC................................................................................................................................................................................................. 22 0 1 2.00 2 1 1 0 0 0 0 0 0
............ATAACTTTGACGCGAGCAACTCGC............................................................................................................................................................................................... 24 0 1 2.00 2 0 1 1 0 0 0 0 0
.........................GAGCAACTCGCAAACCTATCCGATGCGTT............................................................................................................................................................................. 29 3 1 2.00 2 0 2 0 0 0 0 0 0
................................................................................................................................................................................GCGTTATTTGGTCAACGATGAGT............................ 23 0 1 2.00 2 1 0 0 1 0 0 0 0
.....................................................................................................................................................................................................GTTTCAAACCGAGGGAAGTCCC........ 22 0 1 2.00 2 1 0 1 0 0 0 0 0
............ATAACTTTGACGCGAGCAACTCG................................................................................................................................................................................................ 23 0 1 2.00 2 0 2 0 0 0 0 0 0
.......................................................................................................................................................................................................TTCAAACCGAGGGAAGTCCCATTTTCAT 28 0 1 2.00 2 2 0 0 0 0 0 0 0
..........GGATAACTTTGACGCGAGCAACT.................................................................................................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0
....GAATCTGGATAACTTTGACGC.......................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................GTTATTTGGTCAACGATGA.............................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0
..............AACTTTGACGCGAGCAACTCGC............................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................CAACGATGAGTTTCAAACCGAGGGA.............. 25 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................TTTCAAACCGAGGGAAGTCCC........ 21 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................GAGTTTCAAACCGAGGGAA............. 19 0 1 1.00 1 0 1 0 0 0 0 0 0
...........GATAACTTTGACGCGAGCAACTCG................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0
.............TAACTTTGACGCGAGCAACTC................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
....GAAACTGGATAACTTTGACGCG......................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................TTCAAACCGAGGGAAGTCCCATTTT... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................AACCGAGGGAAGTCCCATTTT... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................TTATTTGGTCAACGATGAGT............................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0
...AGAAACTGGATAACTTTGACGCGAG....................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
...AGAAACTGGATAACTTTGACGC.......................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
...........GATAACTTTGACGCGAGCAACTCGCA.............................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................TATTTGGTCAACGATGAGTTT.......................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
.............TAACTTTGGCGCGAGCAACTCG................................................................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................AGTTACAAAATGATGAGAT...................................................................................... 19 2 6 1.00 6 0 4 0 2 0 0 0 0
..........................AGCAACTCGCAAACCTATCCGATGCGTT............................................................................................................................................................................. 28 3 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................GGTCAACGATGAGTTTCAAACCGAGGGA.............. 28 0 1 1.00 1 0 1 0 0 0 0 0 0
..............AACTTTGACGCGAGCAACTCGCAA............................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................GAGCAACTCGCAAACCTATCC..................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................GGTTTCAAACCGATGGAAGT........... 20 2 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................GGTATTTGGTCAACGATGAGT............................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................AACGATGAGTTTCAAACCGAGGGAAGTCCC........ 30 0 1 1.00 1 0 1 0 0 0 0 0 0
...........GTTAACTTTGACGCGAGCAACC.................................................................................................................................................................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................TTCAAACCGAGGGAAGTCCCA....... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
............ATAACTTTGACGCGAGCAACTCGCA.............................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................GATGCGTTATTTGGTCAACGATG............................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AAACCGAGGGAAGTCCCAT...... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................GCGTTATTTGGTCAACGATG............................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.....AAACTGGATAACTTTGACGC.......................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................ATTTGGTCAACGATGAGC............................ 18 1 2 1.00 2 0 0 2 0 0 0 0 0
.................................................................................................................................................................................CGTTATTTGGTCAACGATGAGTTTC......................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
........................CGAGCAACTCGCAAACCTATC...................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
..............AACTTTGACGCGAGCAACT.................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................GAGCAACTCGCAAACCTATCCGATG................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................GTTATTTGGTCAACGATG............................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
......AACTGGATAACTTTGACGCG......................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................TATTTGGTCAACGATGAGTT........................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0
..................TTGACGCGAGCAACTCGCAAACCTATCC..................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................CAACGATGAGTTTCAAACCGAGGGAAG............ 27 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................AGTTACAAAATGATGAGATAA.................................................................................... 21 3 8 0.63 5 0 4 0 0 1 0 0 0
......................................................................................................................................................................................................TTTCAAGCCGATGGAAGT........... 18 2 8 0.50 4 3 0 0 0 0 1 0 0
...........................................................................................................................GTTACAAAATGATGAGATAA.................................................................................... 20 3 20 0.50 10 0 9 0 0 0 0 1 0
............ATAACTGTGACGCGGGCAAG................................................................................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0 0 0 0
...........................................................................................................................GTTACAAAATGATGAGAT...................................................................................... 18 2 14 0.14 2 1 0 0 0 0 1 0 0
..................................................................................................................................AATTTTCAGATCAAGAGGTAA............................................................................ 21 2 17 0.06 1 0 0 0 0 0 0 1 0
....................................................................................................................................TTTTCAGATCAAGAGGTAAAA.......................................................................... 21 2 17 0.06 1 0 0 1 0 0 0 0 0
....................................................................................................................................TTTTCAGATCAAGAGGTAAAAG......................................................................... 22 3 19 0.05 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................GTCTCAACCCGATGGAAG............ 18 3 20 0.05 1 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................ATGGGTTTCAAGCCGATGGA.............. 20 3 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

GGGTCTTTGACCTATTGAAACTGCGCTCGTTGAGCGTTTGGATAGGCTACCATACATATGAGCATACGGCCTATTTTAACTAACGAGTCATTATTATAGATATTCAAGCATTGTACGCAGACTCAATGTTTTAATATTCTAGTTCTCCATTTTGTGCACGGTAAAAGGTGAAAATTCGCAATAAACCAGTTGCTACTCAAAGTTTGGCTCCCTTCAGGGTAAAAGTA
**************************************************...((((.(((((.(((((((((......(((..............))).....)))))......)))).)))))))))...(((.(((...((((((((.......)))).))))...))).))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V120
male body
...............................................................................................................................................................................TCGCAATAAACCAGTTGCTACTCAAAGT........................ 28 0 1 1.00 1 1 0
................................................................................TAACGAGTCATTATTATAGAT.............................................................................................................................. 21 0 1 1.00 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3R:3940583-3940809 + dya_926 CCCAGAAACTGGATAACTTTGACGCGAGCAACTCGCAAACCTATCCGATGGTATGTATA---------CT-------CGTATGCCGGA-----TA------------AAATTGATTGCTCAGT----AATAATATCTAT-------------AAG-TTCGTAACATGCGTCTGAGTTACAAAA----------------------------------------------------TTATA------AG-----ATCAAGAGGTAAAACACG-TGCC-AT-----------------------TTTCC----A--CTTT---TAAGCGTTATTTGGTCAACGATGAGTTTCAAACCGAGGGAAGTCCCATTTTCAT
droEre2 scaffold_4770:6418805-6419063 - CCCAGAAATTGGATAACTTTGACGCGAGCAACACGCAAACCTATCAGATGGTATGTATA---------TT-------CCGGATAA-----------------------AATTGGTTGCGCAGT----AAAAATATCTAT-------------GAG-TTCGTGACATGCGCCTGAGTTACGAAAAC-----GATGTGCATACACTATATATA----------AAACAATCGAG---AATGA------AGATAAGATCAAGACTTAAAACACG-TGCC-AT-----------------------TTT-----CC--ACTT---CAAGCGTTATTTGGTCAACGATGAGTTTCAAACTCAGGGAAGTCCCATTTTCAT
droSec2 scaffold_25:552193-552421 - CCCAGAAACTGGATAACTTTGACGCGAGCAACACGCAAACCTATAAGATGGTATGAATA---------TT-------CCGAAGGAGATG---------------------TATATTGCTCAGT----AAAAATATCCAT-------------AAGCTTCGACACATTATTCGGAGTTACACAA----------------------------------------------------AAATA------AGATAACACCAAGCGCTTGAACACG-TGCC-AT-----------------------TTCAC----A--TATT---TCAGCGTTATTTGCTCAACGATGATTTTCAAACTGAGGGAAGTCCCATTTTCAT
droSim2 3r:6046857-6047086 - CCCAGAAACTGGATAACTTTGACGCGAGCAACACGCAAACCTATAAGATGGTATGTATA---------TT-------CCGAAGGAGGAGATC------------------TATATTGCCCA-T----AAAAATTTCCAT-------------AAG-CTCGACACATTATTCTTAGTTACACAA----------------------------------------------------AAATA------AGATAACACCCAGAGCTTGAACACG-TGCC-AT-----------------------TTCAC----A--TATT---TCAGCGTTATTTGCTCAATGATGAGTTTCAAACTGAGGGAAGTCCCATTTTCAT
dm3 chr3R:15216185-15216412 + CCCAGAAACTGGATAACTTTAACGCGAGCAACACGCAAACCTATCAGATGGTATGTATA---------TT-------CGGAAGGAGAAG---------------------TATATTGCTCAGT----AAAAATATCCAT-------------AAG-TTCGAAACATTCATTTGAGTTAGACAA----------------------------------------------------AAATA------AGATAACACCAAGAGCTTGAACACG-TGCC-AT-----------------------TTTAC----A--CGTT---TCAGCGTTATTTGCTCAACGATGAGTTTCAAACTGAGGGAAGTCCCATTTTCAT
droEug1 scf7180000409804:1491579-1491775 + CCCAGAAATTGGATAACTTTGACGAGAGCAACACGGAAACATATCAAATGGTAGGTAGA---------TT-------------------------ATTCTCCTAATAAT-------------------------------------------------------------------TTTG-----C--------------------A-ATTACTTTTTTAAAC--CCTA-CA---AACTA------AGATAAGATACAATGATA------C-TTCAATT-----------------------G----CGTAC--TTTT---CCAGCGTTATTTGGTAAACGATGAGTTCCTAACTGAGGGAAGTCCCATTTTCAT
droBia1 scf7180000302402:983698-983911 + CCCAGAAACTGGATAACTTTGACGAGAGCAACACGGGAACTTATCAGATGGTAGGCATACA-------TT-------TGGACAA------------------------AACCTATT------------------TCAAGAAAATAATTACATAAC-T-----G-------AGTAGTCAACACA----------------------------------------------------AAACA------AGATTTGATAAAGTGATAGAAACAC-CTCA-TT-----------------------G----CCTGC--TTTT---TCAGCGTTATTTGCTCAACGATGAGTTCCAAACAGAGGGAAGTCCCATTTTCAT
droTak1 scf7180000410451:247984-248206 + CCCAGAAATTGGATAACTTTGACGCTAGCAACACGGCAACTTATCAGATGGTGGGTACACA-------TT-------CGGAAAAT-----------------------AATTAATTC------TTGCAGA---------AATATTATTACGTAAT-T-----GT----AA-------------AA-----GATATTTTTTTACTATAAATT----------GC--------ATATAAATT------AGATTAGATTTAGTA----------------AT-----------------------G----AGTAA--TATT---GCAGCGTTATTTGCTCAACGATGAGTTCCAAACTGAGGGAAGTCCCATTTTCAT
droEle1 scf7180000490994:1010433-1010592 + CCCAAAAGCTGGACAACTTCGACAAAAGCAACAATGCCACCTGGCAGAATGTAAGGATC---------TG-------CTGACTATCAAGTG------------------------------------------------------------------------------TTTATTTTG-----------------------------------------------------------CTA-------------------------A--CTT-TGCT-AA-----------------------T-----TTTC--AATC---CTAGCTGGTCTATATCAACAACAAGTATTTTAAAGATGGCTCTCCCATCTTTAT
droRho1 scf7180000779355:7794-8027 - CCCAGAAACTGGACAACTTTGACGAGTCCAACACTGCGACCTATCAAATGGTAGGTAAA---------AT-------CGGAAAAAAAAGTT----ATTTTTTTGA----------------------A-----------ACAAAAATTACGCAAC-TTTTTAAAGCACGTCTGAGTTTTG-----CGAATTACA--------------------TTTTTTAAC--------ACACACAAT----------AAC----------AGAGGCTC-TTCA-AC-----------------------G----TGTAC--TTTT---TCAGCGATATTTAATCAATGATGAGTTCCAAGCTGAGGGAAGTCCCATTTTCAT
droFic1 scf7180000454126:206788-207000 + CCCAGAAACTGGATAACTTTGACGATAGCAACACAGGCACTTATCAGATGGTCAGTAT-----------T-------ACGAAAAT--------TC------------AACTTAATTACTTTG-----AAAAGTGTT-----------TATGTAAC-TTCATAGCA--AGTCTCAGTTTCT--------------------CAATGCA-ATT--------------------------GCAAGCTAAAGATAAGA--------------ATG-TG----------------------------------------CATT---TTAGCGTTATTTGGTCAATGATGAGTTCCAAACTGAGGGAAGTCCCATTTTCAT
droKik1 scf7180000302707:443774-443997 + CCCAGAAGCTGGATAACTTTGACGAGACCAACACCGAGACTTATCAAATGGTGAGTTGA---------TG-------CAAATAAA------------------------CTTTGAAGTT----TCACAAA---------ACTCAAATTAC------TTGGTAAC----AACTGCGTTTAG-----CTTTTTACA--------------------AATTCTTGT--------GAAAAATAT----------ATT----------TG-----ATGGCT-AT-----------------------TTTA---CAATATTTT---TCAGCGTTATTTAATCAACGATGAATTCCAAACGGAGGGCAGCCCCATTTTTAT
droAna3 scaffold_13340:15175178-15175337 - CCCAAAAGTTGGATAACTTTGACGACAGCAACACGGAAACCTATCAGATGGTAGTTATT--------------------------G---ATTT--ATTTTCTCAA----------------------A-----------TTATA----------------------------------------------------------------------TAA---TA---------------TAA---------------------------TGTGT---A--CA----------------------ATCTT----A--TTTT---ACAGCGTTACTTGATCAACGACGAGTTCCAAACGGACGGCAGTCCCATTTTCAT
droBip1 scf7180000396708:4856078-4856241 + CCCAAAAGTTGGATAACTTTGACGATAGCAACACCGCAACCTATCAGATGGTACTTGGA--------------------------G---ACTT--ATTTTCTTAA----------------------A-----------ATATA----------------------------------------------------------------------AAA---TA---------------TAA---------TATTA--------------GTAT---A--TA----------------------CTTGC----A--CTTT---ACAGCGTTACTTGATCAACGATGAGTTCCAACTGGACGGCAGTCCCATTTTCAT
dp5 2:29678850-29679005 + CACAGAAATTGGATAACTTCGATGATGACAACAAGGAGACCTACGAAATGGTATGTCCAAGGAATGCCCTTTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------AGTGGAACCCT-TTTC-AT-----------------------G----GTTTC--GTTT---TTAGCGTTATCTGGTCAACGATGAGTTCCAAGAGGAGGGTAGCCCCATCTTCAT
droPer2 scaffold_6:5050338-5050493 + CACAGAAATTGGATAACTTCGATGATGACAACAAGGAGACCTACGAAATGGTATGTCCAAGGAATCCCCTTTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------AGTGGAACCCT-TTTC-AT-----------------------G----GTTTC--GTTT---TTAGCGTTATCTGGTCAACGATGAGTTCCAAGAGGAGGGTAGCCCCATCTTCAT
droWil2 scf2_1100000004943:4000553-4000725 + CCCAGAAATTGGATCATTTTGATGAGAGTAATACGCAAACCTATCAAATGGTATGGGCA---------GC----CAGCAACAAGACCAAAGT-TC-AATTTGGAA----------------------A-----------ACGGA------------------------------------------------------------------------------------------------------------------------AAACATG-TGAT-AT-----------------------AT----TTTT--GTTT---CTAGCGCTATTTGGTCAACGATGAATTCCAAGAGGAGGGCAGCCCCATTTTCAT
droVir3 scaffold_13047:16411030-16411187 - CACAACCACTTGACCACTTCGATGAAAGCAATACGAAGACATACGAAATGGTATGAGTG---------CT-----AGCAGAAAACTCAAAG---------------------------------------------------------------------------------------------------------------------------------CG---------------CAT-------------------------ATCTCA-AGTA-TT-----------------------TCCGT----G--TTTT---TCAGCGGTATTTCCTTAACGATGAATTCCAAACTGATGGTAGCCCCATATTCAT
droMoj3 scaffold_6540:12727207-12727373 - CACAACCACTTGATCAATTCGATGAAACCAATAAGGAAACCTACGAAATGGTTAGTGGA----------------------AAATATAATA---------------------------------------------------------------------------------------------------------------------------------TA---------------TA--------------T--------------GTAT---A--TATATGTATGTATATATGATGATTTGTC----TC--TGGT---TTAGCGTTATTTTATCAATGACGAATTCCAAACGGAAGGCAGCCCAATATTCAT
droGri2 scaffold_15116:1341558-1341719 - CACAGCCACTTGATCACTTTGATGAAAGCAATGAGAAGACTTACCAAATGGTAAGAACA---------TT-------TTAAAAA-------------------------------------------------------------------------------CAATATTCTGAACCA-----------------------------------------------------------CAT-------------------------ATTTTAT---A--A-----------------------A----CTTTT--ACTTTATGTAGCGCTATTTGATCAACGATGAATTCCAAACTGAGGGCAGTCCAATTTTCAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CCCAGAAACTGGATAACTTTGACGCGAGCAACTCGCAAACCTATCCGATGGTATGTATA---------CT-------CGTATGCCGGA-----TA------------AAATTGATTGCTCAGT----AATAATATCTAT-------------AAG-TTCGTAACATGCGTCTGAGTTACAAAA----------------------------------------------------TTATA------AG-----ATCAAGAGGTAAAACACG-TGCC-AT-----------------------TTTCC----A--CTTT---TAAGCGTTATTTGGTCAACGATGAGTTTCAAACCGAGGGAAGTCCCATTTTCATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................GTTATTTGGTCAACGATGAGT............................21113.0013010000120000
............ATAACTTTGACGCGAGCAACT......................................................................................................................................................................................................................................................................................................................................................2115.00501100030000
...........GATAACTTTGACGCGAGCAACT......................................................................................................................................................................................................................................................................................................................................................2214.00401000030000
........................................................................................................................................................................................................................................................................................................................................TATTTGGTCAACGATGAGT............................1914.00401000030000
...........................................................................................................................................................................................................................................................................................................................................................TTCAAACCGAGGGAAGTCCCATT.....2313.00301000020000
...........................................................................................................................................................................................................................................................................................................................................................TTCAAACCGAGGGAAGTCCC........2013.00303000000000
..............AACTTTGACGCGAGCAACTCG....................................................................................................................................................................................................................................................................................................................................................2113.00300100110000
............ATAACTTTGACGCGAGCAACTC.....................................................................................................................................................................................................................................................................................................................................................2212.00201000010000
............ATAACTTTGACGCGAGCAACTCGC...................................................................................................................................................................................................................................................................................................................................................2412.00200100010000
....................................................................................................................................................................................................................................................................................................................................GCGTTATTTGGTCAACGATGAGT............................2312.00201000100000
.........................................................................................................................................................................................................................................................................................................................................................GTTTCAAACCGAGGGAAGTCCC........2212.00201100000000
............ATAACTTTGACGCGAGCAACTCG....................................................................................................................................................................................................................................................................................................................................................2312.00200000020000
...........................................................................................................................................................................................................................................................................................................................................................TTCAAACCGAGGGAAGTCCCATTTTCAT2812.00202000000000
..........GGATAACTTTGACGCGAGCAACT......................................................................................................................................................................................................................................................................................................................................................2312.00202000000000
......................................................................................................................................................................................................................................................................................................................................GTTATTTGGTCAACGATGA..............................1911.00100000100000
..............AACTTTGACGCGAGCAACTCGC...................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
................................................................................................................................................................................................................................................................................................................................................CAACGATGAGTTTCAAACCGAGGGA..............2511.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................TTTCAAACCGAGGGAAGTCCC........2111.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................GAGTTTCAAACCGAGGGAA.............1911.00100000010000
...........GATAACTTTGACGCGAGCAACTCG....................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.............TAACTTTGACGCGAGCAACTC.....................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
....GAAACTGGATAACTTTGACGCG.............................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................TTCAAACCGAGGGAAGTCCCATTTT...2511.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................AACCGAGGGAAGTCCCATTTT...2111.00100000010000
.......................................................................................................................................................................................................................................................................................................................................TTATTTGGTCAACGATGAGT............................2011.00100000010000
...AGAAACTGGATAACTTTGACGCGAG...........................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...AGAAACTGGATAACTTTGACGC..............................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........GATAACTTTGACGCGAGCAACTCGCA..................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
........................................................................................................................................................................................................................................................................................................................................TATTTGGTCAACGATGAGTTT..........................2111.00100000010000
.............................................................................................................................................................................................................................................................................................................................................GGTCAACGATGAGTTTCAAACCGAGGGA..............2811.00100000010000
..............AACTTTGACGCGAGCAACTCGCAA.................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.........................GAGCAACTCGCAAACCTATCC.........................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.................................................................................................................................................................................................................................................................................................................................................AACGATGAGTTTCAAACCGAGGGAAGTCCC........3011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................TTCAAACCGAGGGAAGTCCCA.......2111.00101000000000
............ATAACTTTGACGCGAGCAACTCGCA..................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................AAACCGAGGGAAGTCCCAT......1911.00101000000000
....................................................................................................................................................................................................................................................................................................................................GCGTTATTTGGTCAACGATG...............................2011.00101000000000
.....AAACTGGATAACTTTGACGC..............................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.........................................................................................................................................................................................................................................................................................................................................ATTTGGTCAACGATGAGC............................1821.00200200000000
.....................................................................................................................................................................................................................................................................................................................................CGTTATTTGGTCAACGATGAGTTTC.........................2511.00100000010000
........................CGAGCAACTCGCAAACCTATC..........................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..............AACTTTGACGCGAGCAACT......................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.........................GAGCAACTCGCAAACCTATCCGATG.....................................................................................................................................................................................................................................................................................................................................2511.00101000000000
......................................................................................................................................................................................................................................................................................................................................GTTATTTGGTCAACGATG...............................1811.00101000000000
......AACTGGATAACTTTGACGCG.............................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
........................................................................................................................................................................................................................................................................................................................................TATTTGGTCAACGATGAGTT...........................2011.00100001000000
..................TTGACGCGAGCAACTCGCAAACCTATCC.........................................................................................................................................................................................................................................................................................................................................2811.00101000000000
................................................................................................................................................................................................................................................................................................................................................CAACGATGAGTTTCAAACCGAGGGAAG............2711.00100000010000
droEre2
CCCAGAAATTGGATAACTTTGACGCGAGCAACACGCAAACCTATCAGATGGTATGTATA---------TT-------CCGGATAA-----------------------AATTGGTTGCGCAGT----AAAAATATCTAT-------------GAG-TTCGTGACATGCGCCTGAGTTACGAAAAC-----GATGTGCATACACTATATATA----------AAACAATCGAG---AATGA------AGATAAGATCAAGACTTAAAACACG-TGCC-AT-----------------------TTT-----CC--ACTT---CAAGCGTTATTTGGTCAACGATGAGTTTCAAACTCAGGGAAGTCCCATTTTCATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......AATTGGATAACTTTGACGCGAGC..........................................................................................................................................................................................................................................................................................................................................................2313.0031000200
.......ATTGGATAACTTTGACGCGAGCAACACG....................................................................................................................................................................................................................................................................................................................................................2812.0022000000
.......ATTGGATAACTTTGACGCGAGC..........................................................................................................................................................................................................................................................................................................................................................2212.0021000010
...........GATAACTTTGACGCGAGCAACAC.....................................................................................................................................................................................................................................................................................................................................................2312.0020000200
..............AACTTTGACGCGAGCAACACGC...................................................................................................................................................................................................................................................................................................................................................2212.0020001100
.........................................................................................................................................................................................................................................................................................................................................................GTTTCAAACTCAGGGAAGTCCCATT.....2512.0020000200
......................................................................................................................................................................................................................................................................................................................................GTTATTTGGTCAACGATGAG.............................2012.0021001000
......................................................................................................................................................................................................................................................................................................................................GTTATTTGGTCAACGATGAGT............................2112.0020000020
.........................GAGCAACACGCAAACCTATCAGATG.....................................................................................................................................................................................................................................................................................................................................2512.0020101000
..........GGATAACTTTGACGCGAGCAACACG....................................................................................................................................................................................................................................................................................................................................................2511.0010000010
..............AACTTTGACGCGAGCAACACGCAAAC...............................................................................................................................................................................................................................................................................................................................................2611.0011000000
.............TAACTTTGACGCGAGCAACACGC...................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.................................................................................................................................................................GACATGCGCCTGAGTTACGA..................................................................................................................................................................................................2011.0010000010
.......ATTGGATAACTTTGACGC..............................................................................................................................................................................................................................................................................................................................................................1811.0011000000
...........................................................................................................................................................................................................................................................................................................................................................TTCAAACTCAGGGAAGTCCC........2011.0011000000
...........................................................................................................................................................................................................................................................................................................................................................TTCAAACTCAGGGAAGTCCCATTTT...2511.0010000100
...........GATAACTTTGACGCGAGCAACACGC...................................................................................................................................................................................................................................................................................................................................................2511.0010000010
.......ATTGGATAACTTTGACGCGAGCAA........................................................................................................................................................................................................................................................................................................................................................2411.0011000000
....................................................................................................................................................................................................................................................................................................................................................GATGAGTTTCAAACTCAGGGA..............2111.0010000010
...........................................................................................................................................................................................................................................................................................................................................................TTCAAACTCAGGGAAGTCC.........1911.0010000010
......................................................................................................................................................................................................................................................................................................................................GTTATTTGGTCAACGATGAGTTTC.........................2411.0010000100
................CTTTGACGCGAGCAACACG....................................................................................................................................................................................................................................................................................................................................................1911.0011000000
........................................................................................................................................................................................................................................................................................................................................................AGTTTCAAACTCAGGGAA.............1811.0010000010
.......ATTGGATAACTTTGACGCGAGCA.........................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..........................................................................................................................................................................................................................................................................................................................................................TTTCAAACTCAGGGAAGTCCCATT.....2411.0011000000
.............TAACTTTGACGCGAGCAACACGCAAACC..............................................................................................................................................................................................................................................................................................................................................2811.0010100000
.........................................................................................................................................................................................................................................................................................................................................................GTTTCAAACTCAGGGAAGTCC.........2111.0010100000
.......................GCGAGCAACACGCAAACCTATCAGATGC....................................................................................................................................................................................................................................................................................................................................2811.0011000000
...........GATAACTTTGACGCGAGCAACACG....................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.........................................................................................................................................................................................................................................................................................................................................................GTTTCAAACTCAGGGAAGTCCCAT......2411.0011000000
.........................................................................................................................................................................................................................................................................................................................................................GTTTCAAACTCAGGGAAGTCCCATTTT...2711.0011000000
..........................AGCAACACGCAAACCTATCA.........................................................................................................................................................................................................................................................................................................................................2011.0010100000
.........TGGATAACTTTGACGCGAGCAACAC.....................................................................................................................................................................................................................................................................................................................................................2511.0010000100
............ATAACTTTGACGCGAGCAACACGC...................................................................................................................................................................................................................................................................................................................................................2411.0010000010
....................................................................................................................................................................................................................................................................................................................................GCGTTATTTGGTCAACGATGA..............................2111.0011000000
.............TAACTTTGACGCGAGCAACACGCA..................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.............................AACACGCAAACCTATCAGAT......................................................................................................................................................................................................................................................................................................................................2011.0011000000
........................................................................................................................................................................................................................................................................................................................................................AGTTTCAAACTCAGGGAAGTCC.........2211.0010100000
..............................................................................................................................................................................................................................................................................................................................................................AAACTCAGGGAAGTCCCATTTT...2211.0010000100
.........................................................................................................................................................................................................................................................................................................................................................GTTTCAAACTCAGGGAAGTCCC........2211.0011000000
droSec2
CCCAGAAACTGGATAACTTTGACGCGAGCAACACGCAAACCTATAAGATGGTATGAATA---------TT-------CCGAAGGAGATG---------------------TATATTGCTCAGT----AAAAATATCCAT-------------AAGCTTCGACACATTATTCGGAGTTACACAA----------------------------------------------------AAATA------AGATAACACCAAGCGCTTGAACACG-TGCC-AT-----------------------TTCAC----A--TATT---TCAGCGTTATTTGCTCAACGATGATTTTCAAACTGAGGGAAGTCCCATTTTCATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................GATGATTTTCAAACTGAGGGAA.............2216.0061410
............ATAACTTTGACGCGAGCAACACG....................................................................................................................................................................................................................................................................................................................................................2315.0050320
............ATAACTTTGACGCGAGCAACA......................................................................................................................................................................................................................................................................................................................................................2115.0051310
................................................................................................................................................................................................................................................................................................................................................CAACGATGATTTTCAAACTGAGGGAA.............2615.0051310
............ATAACTTTGACGCGAGCAACACGC...................................................................................................................................................................................................................................................................................................................................................2414.0041300
...AGAAACTGGATAACTTTGACGCGAGC..........................................................................................................................................................................................................................................................................................................................................................2613.0030300
..................................................................................................................................................................................................................................................................................................................................................ACGATGATTTTCAAACTGAGGGA..............2313.0030210
.......................................................................................................................................................................................................................................................................................................................................................GATTTTCAAACTGAGGGAA.............1913.0031200
............ATAACTTTGACGCGAGCAACAC.....................................................................................................................................................................................................................................................................................................................................................2213.0030120
..............AACTTTGACGCGAGCAACACG....................................................................................................................................................................................................................................................................................................................................................2112.0020110
..............AACTTTGACGCGAGCAACACGC...................................................................................................................................................................................................................................................................................................................................................2212.0020200
................................................................................................................................................................................................................................................................................................................................................CAACGATGATTTTCAAACTGAGGGA..............2512.0020200
............ATAACTTTGACGCGAGCAACACGCA..................................................................................................................................................................................................................................................................................................................................................2512.0020110
...........GATAACTTTGACGCGAGCAACA......................................................................................................................................................................................................................................................................................................................................................2212.0020200
..............AACTTTGACGCGAGCAACA......................................................................................................................................................................................................................................................................................................................................................1912.0021100
.............................AACACGCAAACCTATAAGATGCGT..................................................................................................................................................................................................................................................................................................................................2412.0020200
...........GATAACTTTGACGCGAGCAACAC.....................................................................................................................................................................................................................................................................................................................................................2311.0011000
...........GATAACTTTGACGCGAGCAACACGCA..................................................................................................................................................................................................................................................................................................................................................2611.0010100
....................................................................................................................................................................................................................................................................................................................................................GATGATTTTCAAACTGAGGGAAGTCCCA.......2811.0010100
..CAGAAACTGGATAACTTTGACGCGAGC..........................................................................................................................................................................................................................................................................................................................................................2711.0010100
......................................................................................................................................................................................................................................................................................................................................................TGATTTTCAAACTGAGGGAAGT...........2211.0010100
...........GATAACTTTGACGCGAGCAACACG....................................................................................................................................................................................................................................................................................................................................................2411.0010100
.............................................................................................................................................................................................................................................................................................................................................GCTCAACGATGATTTTCAAACT....................2211.0010100
...........GATAACTTTGACGCGAGC..........................................................................................................................................................................................................................................................................................................................................................1811.0010010
...........................................................................................................................................................................................................................................................................................................................................................TTCAAACTGAGGGAAGTCCCA.......2111.0010100
..................................................................................................................................................................................................................................................................................................................................................ACGATGATTTTCAAACTGAGGGAA.............2411.0010100
........................................................................................................................................................................................................................................................................................................................................................ATTTTCAAACTGAGGGAAGTCCCATTTTC..2911.0010100
................................ACGCAAACCTATAAGATG.....................................................................................................................................................................................................................................................................................................................................1811.0010010
............................CAACACGCAAACCTATAAG........................................................................................................................................................................................................................................................................................................................................1911.0011000
........CTGGATAACTTTGACGCGAG...........................................................................................................................................................................................................................................................................................................................................................2011.0010010
................................................................................................................................................................................................................................................................................................................................................CAACGATGATTTTCAAACTGAGGGAAGTC..........2911.0010100
.....................................................................................................................................................................................................................................................................................................................................................ATGATTTTCAAACTGAGGGAA.............2111.0010100
....................................................................................................................................................................................................................................................................................................................................................GATGATTTTCAAACTGAGGGAAGTCCCAT......2911.0010100
................................................................................................................................................................................................................................................................................................................................................CAACGATGATTTTCAAACTGAGGG...............2411.0011000
...........................................................................................................................................................................................................................................................................................................................................................TTCAAACTGAGGGAAGTCCCATTTTCG.2711.0010100
.....................................................................................................................................................................................................................................................................................................................................................ATGATTTTCAAACTGAGGGA..............2011.0010100
....GAAACTGGATAACTTTGACGCGAG...........................................................................................................................................................................................................................................................................................................................................................2411.0010100
...............ACTTTGACGCGAGCAACACGCAAA................................................................................................................................................................................................................................................................................................................................................2411.0010100
................................................................................................................................................................ACACATTATTCGGAGTTAC....................................................................................................................................................................................................1911.0010100
.............TAACTTTGACGCGAGCAACACGC...................................................................................................................................................................................................................................................................................................................................................2311.0010100
........................................................................................................................................................................................................................................................................................................................................................ATTTTCAAACTGAGGGAAG............1911.0010100
......AACTGGATAACTTTGACGCGAG...........................................................................................................................................................................................................................................................................................................................................................2211.0010100
droSim2
CCCAGAAACTGGATAACTTTGACGCGAGCAACACGCAAACCTATAAGATGGTATGTATA---------TT-------CCGAAGGAGGAGATC------------------TATATTGCCCA-T----AAAAATTTCCAT-------------AAG-CTCGACACATTATTCTTAGTTACACAA----------------------------------------------------AAATA------AGATAACACCCAGAGCTTGAACACG-TGCC-AT-----------------------TTCAC----A--TATT---TCAGCGTTATTTGCTCAATGATGAGTTTCAAACTGAGGGAAGTCCCATTTTCATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........GATAACTTTGACGCGAGCAACAC.....................................................................................................................................................................................................................................................................................................................................................2312.00200200000000000000
......AACTGGATAACTTTGACGCGAGCAA........................................................................................................................................................................................................................................................................................................................................................2512.00200200000000000000
.............................AACACGCAAACCTATAAGATG.....................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
................................................................................................................................................................................................................................................................................................................................................CAATGATGAGTTTCAAACTGAGG................2311.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................TTTCAAACTGAGGGAAGTCCCATTTT...2611.00100010000000000000
.........TGGATAACTTTGACGCGAGC..........................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
......AACTGGATAACTTTGACGC..............................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.....AAACTGGATAACTTTGACGCGAGC..........................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
..............AACTTTGACGCGAGCAACACGCAAACC..............................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...........GATAACTTTGACGCGAGCAAC.......................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
....GAAACTGGATAACTTTGACGCGAGC..........................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
.......ACTGGATAACTTTGT.................................................................................................................................................................................................................................................................................................................................................................15160.06100000000010000000
dm3
CCCAGAAACTGGATAACTTTAACGCGAGCAACACGCAAACCTATCAGATGGTATGTATA---------TT-------CGGAAGGAGAAG---------------------TATATTGCTCAGT----AAAAATATCCAT-------------AAG-TTCGAAACATTCATTTGAGTTAGACAA----------------------------------------------------AAATA------AGATAACACCAAGAGCTTGAACACG-TGCC-AT-----------------------TTTAC----A--CGTT---TCAGCGTTATTTGCTCAACGATGAGTTTCAAACTGAGGGAAGTCCCATTTTCATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................CAACGATGAGTTTCAAACTGA..................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................AAACTGAGGGAAGTCCCATTTTC..2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AACACGCAAACCTATCAGATGCGT..................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................................................................................................................................................................................................TGCTCAACGATGAGTTTCAAACTG...................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GTTTCAAACTGAGGGAAGTCCCATT.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGGATAACTTTAACGCGAGC..........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........GGATAACTTTAACGCGAGCAACACGC...................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................................................TTCAAACTGAGGGAAGTC..........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ACCTATCAGATGGTATGTATC---------GC-------..........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AACTGAGGGAAGTCCCAT......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AACACGCAAACCTATCAGA.......................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATAACTTTAACGCGAGCAACAC.....................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................ACACGCAAACCTATCAGATGCGT..................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GATGAGTTTCAAACTGAGGGAA.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............ATAACTTTAACGCGAGC..........................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTAACGCGAGCAACACG....................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GATAACTTTAACGCGAGCAACACG....................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TCAAACTGAGGGAAGTCCCA.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........GGATAACTTTAACGCGAGC..........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AACTGGATAACTTTAACGCGAG...........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......AACTGGATAACTTTAACGCGA............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TTCAAACTGAGGGAAGTCCCAT......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TATTTGCTCAACGATGAGTTTCA........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TTTAACGCGAGCAACACGC...................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....AAACTGGATAACTTTAACGCGAGC..........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTTTAACGCGAGCAACACG....................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................AACTGAGGGAAGTCCCATT.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ACGCAAACCTATCAGATGC....................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AACTTTAACGCGAGCAACACG....................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............ATAACTTTAACGCGAGCAACA......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CGAGCAACACGCAAACCTATCA.........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................GTTATTTGCTCAACGATGA..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GATAACTTTAACGCGAGC..........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TCAACGATGAGTTTCAAACTGAGGGAA.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................................................................................................CAACGATGAGTTTCAAACTGAGGGA..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................................CGCAAACCTATCAGATGC....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CCCAGAAACTGGATAACT.....................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ACGCAAACCTATCAGATGCGT..................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GCAAACCTATCAGATGCG...................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
CCCAGAAATTGGATAACTTTGACGAGAGCAACACGGAAACATATCAAATGGTAGGTAGA---------TT-------------------------ATTCTCCTAATAAT-------------------------------------------------------------------TTTG-----C--------------------A-ATTACTTTTTTAAAC--CCTA-CA---AACTA------AGATAAGATACAATGATA------C-TTCAATT-----------------------G----CGTAC--TTTT---CCAGCGTTATTTGGTAAACGATGAGTTCCTAACTGAGGGAAGTCCCATTTTCATSizeHit CountTotal NormTotal
No Reads
droBia1
CCCAGAAACTGGATAACTTTGACGAGAGCAACACGGGAACTTATCAGATGGTAGGCATACA-------TT-------TGGACAA------------------------AACCTATT------------------TCAAGAAAATAATTACATAAC-T-----G-------AGTAGTCAACACA----------------------------------------------------AAACA------AGATTTGATAAAGTGATAGAAACAC-CTCA-TT-----------------------G----CCTGC--TTTT---TCAGCGTTATTTGCTCAACGATGAGTTCCAAACAGAGGGAAGTCCCATTTTCATSizeHit CountTotal NormTotal
No Reads
droTak1
CCCAGAAATTGGATAACTTTGACGCTAGCAACACGGCAACTTATCAGATGGTGGGTACACA-------TT-------CGGAAAAT-----------------------AATTAATTC------TTGCAGA---------AATATTATTACGTAAT-T-----GT----AA-------------AA-----GATATTTTTTTACTATAAATT----------GC--------ATATAAATT------AGATTAGATTTAGTA----------------AT-----------------------G----AGTAA--TATT---GCAGCGTTATTTGCTCAACGATGAGTTCCAAACTGAGGGAAGTCCCATTTTCATSizeHit CountTotal NormTotal
No Reads
droEle1
CCCAAAAGCTGGACAACTTCGACAAAAGCAACAATGCCACCTGGCAGAATGTAAGGATC---------TG-------CTGACTATCAAGTG------------------------------------------------------------------------------TTTATTTTG-----------------------------------------------------------CTA-------------------------A--CTT-TGCT-AA-----------------------T-----TTTC--AATC---CTAGCTGGTCTATATCAACAACAAGTATTTTAAAGATGGCTCTCCCATCTTTATSizeHit CountTotal NormTotal
No Reads
droRho1
CCCAGAAACTGGACAACTTTGACGAGTCCAACACTGCGACCTATCAAATGGTAGGTAAA---------AT-------CGGAAAAAAAAGTT----ATTTTTTTGA----------------------A-----------ACAAAAATTACGCAAC-TTTTTAAAGCACGTCTGAGTTTTG-----CGAATTACA--------------------TTTTTTAAC--------ACACACAAT----------AAC----------AGAGGCTC-TTCA-AC-----------------------G----TGTAC--TTTT---TCAGCGATATTTAATCAATGATGAGTTCCAAGCTGAGGGAAGTCCCATTTTCATSizeHit CountTotal NormTotal
No Reads
droFic1
CCCAGAAACTGGATAACTTTGACGATAGCAACACAGGCACTTATCAGATGGTCAGTAT-----------T-------ACGAAAAT--------TC------------AACTTAATTACTTTG-----AAAAGTGTT-----------TATGTAAC-TTCATAGCA--AGTCTCAGTTTCT--------------------CAATGCA-ATT--------------------------GCAAGCTAAAGATAAGA--------------ATG-TG----------------------------------------CATT---TTAGCGTTATTTGGTCAATGATGAGTTCCAAACTGAGGGAAGTCCCATTTTCATSizeHit CountTotal NormTotal
No Reads
droKik1
CCCAGAAGCTGGATAACTTTGACGAGACCAACACCGAGACTTATCAAATGGTGAGTTGA---------TG-------CAAATAAA------------------------CTTTGAAGTT----TCACAAA---------ACTCAAATTAC------TTGGTAAC----AACTGCGTTTAG-----CTTTTTACA--------------------AATTCTTGT--------GAAAAATAT----------ATT----------TG-----ATGGCT-AT-----------------------TTTA---CAATATTTT---TCAGCGTTATTTAATCAACGATGAATTCCAAACGGAGGGCAGCCCCATTTTTATSizeHit CountTotal NormTotal
No Reads
droAna3
CCCAAAAGTTGGATAACTTTGACGACAGCAACACGGAAACCTATCAGATGGTAGTTATT--------------------------G---ATTT--ATTTTCTCAA----------------------A-----------TTATA----------------------------------------------------------------------TAA---TA---------------TAA---------------------------TGTGT---A--CA----------------------ATCTT----A--TTTT---ACAGCGTTACTTGATCAACGACGAGTTCCAAACGGACGGCAGTCCCATTTTCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........GGATAACTTTGACGACAGC..........................................................................................................................................................................................................................................................................................................................................................1914.004310000
......................................................................................................................................................................................................................................................................................................................................GTTACTTGATCAACGACGAGT............................2112.002000020
....................................................................................................................................................................................................................................................................................................................................................GACGAGTTCCAAACGGACGGCAGT...........2412.002000020
......................................................................................................................................................................................................................................................................................................................................GTTACTTGATCAACGACGA..............................1912.002100010
....................GACGACAGCAACACGGAAACC..............................................................................................................................................................................................................................................................................................................................................2112.002110000
............ATAACTTTGACGACAGCAACAC.....................................................................................................................................................................................................................................................................................................................................................2212.002200000
.............................................................................................................................................................................................................................................................................................................................................GATCAACGACGAGTTCCAAACGGACGGC..............2812.002200000
..........GGATAACTTTGACGACAGCAACAC.....................................................................................................................................................................................................................................................................................................................................................2411.001100000
........................ACAGCAACACGGAAACCTATCA.........................................................................................................................................................................................................................................................................................................................................2211.001100000
.......................GACAGCAACACGGAAACCTATCA.........................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................................................................................................................................................................................................................................................................................................................................................GTTCCAAACGGACGGCAGTCCCAT......2411.001000010
..............................................................................................................................................................................................................................................................................................................................................ATCAACGACGAGTTCCAAACGGACG................2511.001010000
.............TAACTTTGACGACAGCAACAC.....................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................CGACAGCAACACGGAAACCTAT...........................................................................................................................................................................................................................................................................................................................................2211.001100000
.......GTTGGATAACTTTGACGACAGCAACACG....................................................................................................................................................................................................................................................................................................................................................2811.001100000
......................................................................................................................................................................................................................................................................................................................................GTTACTTGATCAACGACGAGTTC..........................2311.001000010
.............TAACTTTGACGACAGCAACACGGA..................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......................................................................................................................................................................................................................................................................................................................................................GAGTTCCAAACGGACGGCAGTCCCAT......2611.001100000
..........................AGCAACACGGAAACCTATCAGAT......................................................................................................................................................................................................................................................................................................................................2311.001100000
..........GGATAACTTTGACGACAGCAACA......................................................................................................................................................................................................................................................................................................................................................2311.001100000
...........GATAACTTTGACGACAGCAACACGGA..................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................................................................................................................................................................................................................................................................................................................................CGTTACTTGATCAACGACGAGTTCCAAAC.....................2911.001000010
................................................................................................................................................................................................................................................................................................................................................CAACGACGAGTTCCAAACGGAC.................2211.001010000
.........................CAGCAACACGGAAACCTATCAGATGC....................................................................................................................................................................................................................................................................................................................................2611.001100000
........TTGGATAACTTTGACGACAG...........................................................................................................................................................................................................................................................................................................................................................2011.001100000
......................................................................................................................................................................................................................................................................................................................................GTTACTTGATCAACGACGAGTTCC.........................2411.001000010
................CTTTGACGACAGCAACACGGAAACCT.............................................................................................................................................................................................................................................................................................................................................2611.001010000
............................CAACACGGAAACCTATCAGATGC....................................................................................................................................................................................................................................................................................................................................2311.001010000
.........................................................................................................................................................................................................................................................................................................................................................GTTCCAAACGGACGGCAGTC..........2011.001100000
............ATAACTTTGACGACAGCAA........................................................................................................................................................................................................................................................................................................................................................1911.001000100
.........................................................................................................................................................................................................................................................................................................................................................GTTCCAAACGGACGGCAGTCCC........2211.001100000
...........................GCAACACGGAAACCTATCAGA.......................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................AACACGGAAACCTATCAGATGCGT..................................................................................................................................................................................................................................................................................................................................2411.001000010
...........GATAACTTTGACGACAGCA.........................................................................................................................................................................................................................................................................................................................................................1911.001100000
................................................................................................................................................................................................................................................................................................................................................CAACGACGAGTTCCAAACGGACGGCAGT...........2811.001000010
..........................................................................................................................................................................................................................................................................................................................................CTTGATCAACGACGAGTTCCAAAC.....................2411.001000010
...................................................................................................................................................................................................................................................................................................................................................CGACGAGTTCCAAACGGAC.................1911.001010000
..........................AGCAACACGGAAACCTATCA.........................................................................................................................................................................................................................................................................................................................................2011.001100000
..............AACTTTGACGACAGCAACACGGAA.................................................................................................................................................................................................................................................................................................................................................2411.001100000
.............................AACACGGAAACCTATCAGATGC....................................................................................................................................................................................................................................................................................................................................2211.001010000
.........................................................................................................................................................................................................................................................................................................................................................GTTCCAAACGGACGGCAGTCCCATT.....2511.001000010
....................................................................................................................................................................................................................................................................................................................................GCGTTACTTGATCAACGAC................................1911.001000100
droBip1
CCCAAAAGTTGGATAACTTTGACGATAGCAACACCGCAACCTATCAGATGGTACTTGGA--------------------------G---ACTT--ATTTTCTTAA----------------------A-----------ATATA----------------------------------------------------------------------AAA---TA---------------TAA---------TATTA--------------GTAT---A--TA----------------------CTTGC----A--CTTT---ACAGCGTTACTTGATCAACGATGAGTTCCAACTGGACGGCAGTCCCATTTTCATSizeHit CountTotal NormTotal
No Reads
dp5
CACAGAAATTGGATAACTTCGATGATGACAACAAGGAGACCTACGAAATGGTATGTCCAAGGAATGCCCTTTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------AGTGGAACCCT-TTTC-AT-----------------------G----GTTTC--GTTT---TTAGCGTTATCTGGTCAACGATGAGTTCCAAGAGGAGGGTAGCCCCATCTTCATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............AACTTCGATGATGACAACAAGGA..................................................................................................................................................................................................................................................................................................................................................23113.001301300000000
................................................................................................................................................................................................................................................................................................................................................CAACGATGAGTTCCAAGAGGAGGGT..............2513.0030300000000
................CTTCGATGATGACAACAAGGA..................................................................................................................................................................................................................................................................................................................................................2113.0030300000000
................................................................................................................................................................................................................................................................................................................................................CAACGATGAGTTCCAAGAGGAGG................2313.0030300000000
..........................GACAACAAGGAGACCTACGAAATGCGT..................................................................................................................................................................................................................................................................................................................................2713.0030300000000
............ATAACTTCGATGATGACAACAAGGA..................................................................................................................................................................................................................................................................................................................................................2513.0030300000000
CACAGAAATTGGATAACTTCGAT................................................................................................................................................................................................................................................................................................................................................................2313.0030300000000
...........................................................................................................................................................................................................................................................................................................................................CTGGTCAACGATGAGTTCCAAGAGGAGG................2812.0020100001000
....................................................................................................................................................................................................................................................................................................................................................GATGAGTTCCAAGAGGAGG................1912.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................GTTCCAAGAGGAGGGTAGCCC.........2112.0020200000000
.....................................................................................................................................................................................................................................................................................................................................................ATGAGTTCCAAGAGGAGG................1812.0020200000000
..............AACTTCGATGATGACAACAAGG...................................................................................................................................................................................................................................................................................................................................................2212.0020200000000
..............................................................................................................................................................................................................................................................................................................................................GTCAACGATGAGTTCCAAGAGGAGG................2512.0020200000000
................................................................................................................................................................................................................................................................................................................................................CAACGATGAGTTCCAAGAGGAGGGTA.............2612.0020200000000
....................GATGATGACAACAAGGAGACCTACG..........................................................................................................................................................................................................................................................................................................................................2512.0020000002000
.........................................................................................................................................................................................................................................................................................................................................ATCTGGTCAACGATGAGTT...........................1912.0020200000000
....................GATGATGACAACAAGGAGAC...............................................................................................................................................................................................................................................................................................................................................2012.0020200000000
.............................AACAAGGAGACCTACGAAATGCGT..................................................................................................................................................................................................................................................................................................................................2412.0020200000000
....................................................................................................................................................................................................................................................................................................................................GCGTTATCTGGTCAACGATGA..............................2111.0010100000000
..............................ACAAGGAGACCTACGAAATG.....................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......AATTGGATAACTTCGATGATGACAAC.......................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
........................................................................................................................................................................................................................................................................................................................................................AGTTCCAAGAGGAGGGTA.............1811.0010100000000
..............................................................................................................................................................................................................................................................................................................................................GTCAACGATGAGTTCCAAGAGGA..................2311.0010100000000
.ACAGAAATTGGATAACTT....................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...........................ACAACAAGGAGACCTACGA.........................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................TCTGGTCAACGATGAGTTCCAAGA.....................2411.0010100000000
CACAGAAATTGGATAACTTCGATGAT.............................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
........TTGGATAACTTCGATGATGACAACA......................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
....................GATGATGACAACAAGGAGA................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
............................CAACAAGGAGACCTACGA.........................................................................................................................................................................................................................................................................................................................................1811.0010100000000
....................................................................................................................................................................................................................................................................................................................................................GATGAGTTCCAAGAGGAGGGT..............2111.0010100000000
........TTGGATAACTTCGATGATGA...........................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
....................................................................................................................................................................................................................................................................................................................................GCGTTATCTGGTCAACGATGAGTTC..........................2511.0010100000000
............................CAACAAGGAGACCTACGAAATGC....................................................................................................................................................................................................................................................................................................................................2311.0010100000000
CACAGAAATTGGATAACTTCGATGATGA...........................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
........TTGGATAACTTCGATGATGACAACAA.....................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.ACAGAAATTGGATAACTTCGAT................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................................TTATCTGGTCAACGATGAGTTCC.........................2311.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................GTTCCAAGAGGAGGGTAGC...........1911.0010100000000
.............................AACAAGGAGACCTACGAAATGC....................................................................................................................................................................................................................................................................................................................................2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................................CCAAGAGGAGGGTAGCCCC........1911.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................ATGAGTTCCAAGAGGAGGGTAG............2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................CTGGTCAACGATGAGTTCCAAGAGGA..................2611.0010100000000
....................................................................................................................................................................................................................................................................................................................................................GATGAGTTCCAAGAGGAG.................1811.0010100000000
...AGAAATTGGATAACTTCGAT................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................................................................................................................CAACGATGAGTTCCAAGAGGAG.................2211.0010000001000
.........................................................................................................................................................................................................................................................................................................................................................GTTCCAAGAGGAGGGTAGCCCCATCTTC..2811.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................GGAGGGTAGCCCCATCTTC..1911.0010100000000
CACAGAAATTGGATAACTT....................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............................ACAAGGAGACCTACGAAATGG....................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................GATGATGACAACAAGGAGACCTACGA.........................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..............................................................................................................................................................................................................................................................................................................................................GTCAACGATGAGTTCCAAGA.....................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................GGTCAACGATGAGTTCCAAGAGGAGG................2611.0010100000000
........................ATGACAACAAGGAGACCTACGA.........................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.........................TGACAACAAGGAGACCTACGA.........................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................TGACAACAAGGAGACCTACG..........................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.ACAGAAATTGGATAACTTC...................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
............ATAACTTCGATGATGACAACAAG....................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..............AACTTCGATGATGACAACAAG....................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................GATGACAACAAGGAGACCTACGA.........................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................GTCAACGATGAGTTCCAAGAG....................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................ATCTGGTCAACGATGAGT............................1811.0010100000000
.....................ATGATGACAACAAGGAGACCT.............................................................................................................................................................................................................................................................................................................................................2111.0010000001000
...............ACTTCGATGATGACAACAAGGA..................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........................GACAACAAGGAGACCTACGAAATGC....................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.........TGGATAACTTCGATGATGACAACAAGGA..................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
..........................GACAACAAGGAGACCTACG..........................................................................................................................................................................................................................................................................................................................................1911.0010100000000
............................CAACAAGGAGACCTACGAAATGCGT..................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..........................GACAACAAGGAGACCTACGAAA.......................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................GTCAACGATGAGTTCCAAG......................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................GAGTTCCAAGAGGAGGGTAG............2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................ATGAGTTCCAAGAGGAGGGT..............2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................GTTATCTGGTCAACGATGAGTT...........................2211.0010100000000
..........GGATAACTTCGATGATGACAACAAG....................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................................................................................................................................................................................................GTTATCTGGTCAACGATG...............................1811.0010000100000
....................................................................................................................................................................................................................................................................................................................................................GATGAGTTCCAAGAGGAGGGTA.............2211.0010100000000
...........GATAACTTCGATGATGACAACAAGGA..................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................ATGAGTTCCAAGAGGAGGGTA.............2111.0010100000000
droPer2
CACAGAAATTGGATAACTTCGATGATGACAACAAGGAGACCTACGAAATGGTATGTCCAAGGAATCCCCTTTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------AGTGGAACCCT-TTTC-AT-----------------------G----GTTTC--GTTT---TTAGCGTTATCTGGTCAACGATGAGTTCCAAGAGGAGGGTAGCCCCATCTTCATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................CAACGATGAGTTCCAAGAGGAGG................2315.005030002
........................ATGACAACAAGGAGACCTACGAAATG.....................................................................................................................................................................................................................................................................................................................................2612.002200000
.............TAACTTCGATGATGACAACAAGGAG.................................................................................................................................................................................................................................................................................................................................................2512.002010001
.................................................................................................................................................................................................................................................................................................................................................AACGATGAGTTCCAAGAGGAGGGT..............2412.002000002
....................................................................................................................................................................................................................................................................................................................................................GATGAGTTCCAAGAGGAGG................1912.002000002
.....................................................................................................................................................................................................................................................................................................................................CGTTATCTGGTCAACGATGAGTTC..........................2411.001010000
...........................................................................................................................................................................................................................................................................................................................................CTGGTCAACGATGAGTTCC.........................1911.001001000
..............AACTTCGATGATGACAACAAGG...................................................................................................................................................................................................................................................................................................................................................2211.001010000
...........GATAACTTCGATGATGACAAC.......................................................................................................................................................................................................................................................................................................................................................2111.001010000
............................................................................................................................................................................................................................................................................................................................................................CCAAGAGGAGGGTAGCCCCATC.....2211.001001000
........................ATGACAACAAGGAGACCTACG..........................................................................................................................................................................................................................................................................................................................................2111.001010000
......................TGATGACAACAAGGAGACCTACG..........................................................................................................................................................................................................................................................................................................................................2311.001000001
......................................................................................................................................................................................................................................................................................................................................GTTATCTGGTCAACGATGAG.............................2011.001000001
.........................................................................................................................................................................................................................................................................................................................................................GTTCCAAGAGGAGGGTAGCCCCAT......2411.001000001
.....................................................................................................................................................................................................................................................................................................................................................ATGAGTTCCAAGAGGAGGGTAGCCCC........2611.001000001
....................GATGATGACAACAAGGAGAC...............................................................................................................................................................................................................................................................................................................................................2011.001000001
droWil2
CCCAGAAATTGGATCATTTTGATGAGAGTAATACGCAAACCTATCAAATGGTATGGGCA---------GC----CAGCAACAAGACCAAAGT-TC-AATTTGGAA----------------------A-----------ACGGA------------------------------------------------------------------------------------------------------------------------AAACATG-TGAT-AT-----------------------AT----TTTT--GTTT---CTAGCGCTATTTGGTCAACGATGAATTCCAAGAGGAGGGCAGCCCCATTTTCATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............CATTTTGATGAGAGTAATACGC...................................................................................................................................................................................................................................................................................................................................................2214.00400040
.......................................................................................................................................................................................................................................................................................................................................................GAATTCCAAGAGGAGGGC..............1813.00301020
..CAGAAATTGGATCATTTTG..................................................................................................................................................................................................................................................................................................................................................................1912.00200020
................................................................................................................................................................................................................................................................................................................................................CAACGATGAATTCCAAGAGGAGGGC..............2512.00200020
.........TGGATCATTTTGATGAGAGTAATAC.....................................................................................................................................................................................................................................................................................................................................................2511.00100010
.....................ATGAGAGTAATACGCAAACCTAT...........................................................................................................................................................................................................................................................................................................................................2311.00100010
................................................................................................................................................................................................................................................................................................................................................CAACGATGAATTCCAAGAGGAGGG...............2411.00100010
..CAGAAATTGGATCATTTTGAT................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...........................................................................................................................................................................................................................................................................................................................................TTGGTCAACGATGAATTCC.........................1911.00100010
..............CATTTTGATGAGAGTAATACG....................................................................................................................................................................................................................................................................................................................................................2111.00100010
....................GATGAGAGTAATACGCAAACCTATC..........................................................................................................................................................................................................................................................................................................................................2511.00101000
..........GGATCATTTTGATGAGAGT..........................................................................................................................................................................................................................................................................................................................................................1911.00100100
.........................................................................................................................................................................................................................................................................................................................................ATTTGGTCAACGATGAAT............................1811.00100010
....................................................................................................................................................................................................................................................................................................................................................GATGAATTCCAAGAGGAGGGC..............2111.00100010
.................................................................................................................................................................................................................................................................................................................................................AACGATGAATTCCAAGAGGAGG................2211.00100010
............................................................................................................................................................................................................................................................................................................................................TGGTCAACGATGAATTCCAAGAGGAGGG...............2811.00100100
................TTTTGATGAGAGTAATACGCAAACCT.............................................................................................................................................................................................................................................................................................................................................2611.00100010
...................TGATGAGAGTAATACGCAA.................................................................................................................................................................................................................................................................................................................................................1911.00100010
....................GATGAGAGTAATACGCAAACCT.............................................................................................................................................................................................................................................................................................................................................2211.00100010
...................................................................................................................................................................................................................................................................................................................................................CGATGAATTCCAAGAGGAGG................2011.00100010
......................................................................................................................................................................................................................................................................................................................................................TGAATTCCAAGAGGAGGGC..............1911.00101000
.....................................................................................................................................................................................................................................................................................................................................CGCTATTTGGTCAACGAT................................1811.00100010
...............................................................................................................................................................................................................................................................................................................................................TCAACGATGAATTCCAAGAGGAGG................2411.00100010
.......................................................................................................................................................................................................................................................................................................................................................GAATTCCAAGAGGAGGGCAGCC..........2211.00100010
................................................................................................................................................................................................................................................................................................................................................CAACGATGAATTCCAAGAGGAG.................2211.00100100
....................................................................................................................................................................................................................................................................................................................................GCGCTATTTGGTCAACGAT................................1911.00100010
.................TTTGATGAGAGTAATACGCA..................................................................................................................................................................................................................................................................................................................................................2011.00100010
droVir3
CACAACCACTTGACCACTTCGATGAAAGCAATACGAAGACATACGAAATGGTATGAGTG---------CT-----AGCAGAAAACTCAAAG---------------------------------------------------------------------------------------------------------------------------------CG---------------CAT-------------------------ATCTCA-AGTA-TT-----------------------TCCGT----G--TTTT---TCAGCGGTATTTCCTTAACGATGAATTCCAAACTGATGGTAGCCCCATATTCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................ATGAATTCCAAACTGATG................1811.001001000000000000000000000000000000000000000000000000000000000000
.........................AAGCAATACGAAGACATA............................................................................................................................................................................................................................................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
.......................GAAAGCAATACGAAGACATACGA.........................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.......ACTTGACCACTTCGATGAAAGCAATA......................................................................................................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
....................GATGAAAGCAATACGAAGAC...............................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
..............................ATACGAAGACATACGAAAT......................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
..............................ATACGAAGACATACGAAATGC....................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........GACCACTTCGATGAAAGCAAT.......................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TTAACGATGAATTCCAAACTGATG................2411.001000000000000001000000000000000000000000000000000000000000000000
..CAACCACTTGACCACTTCGATGAA.............................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GATGAATTCCAAACTGATGGT..............2111.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ATTCCAAACTGATGGTAGCCCCAT......2411.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GTATTTCCTTAACGATGAATTCCAAACT....................2811.001001000000000000000000000000000000000000000000000000000000000000
.....CCACTTGACCACTTCGATGAAAGC..........................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GATGAATTCCAAACTGATG................1911.001001000000000000000000000000000000000000000000000000000000000000
..................TCGATGAAAGCAATACGAAGAC...............................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTCCTTAACGATGAATTCCAAACTGAT.................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AACTGATGGTAGCCCCATAT....2011.001001000000000000000000000000000000000000000000000000000000000000
...................CGATGAAAGCAATACGAAGAC...............................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................AACGATGAATTCCAAACTGAT.................2111.001001000000000000000000000000000000000000000000000000000000000000
..........TGACCACTTCGATGAAAGCA.........................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTCCTTAACGATGAATTCCAAACT....................2411.001000000000000000000000100000000000000000000000000000000000000000
......................TGAAAGCAATACGAAGACATAC...........................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CCTTAACGATGAATTCCAAACT....................2211.001001000000000000000000000000000000000000000000000000000000000000
............................CAATACGAAGACATACGAAAT......................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
......................TGAAAGCAATACGAAGACATACGAAA.......................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
...........................GCAATACGAAGACATACGA.........................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CCTTAACGATGAATTCCAAACTGATG................2611.001000000000000001000000000000000000000000000000000000000000000000
....................GATGAAAGCAATACGAAGA................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
..........TGACCACTTCGATGAAAGC..........................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
................................ACGAAGACATACGAAATGCG...................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.................................CGAAGACATACGAAATGCGG..................................................................................................................................................................................................................................................................................................................................2080.252000000000000000000000000000002000000000000000000000000000000000
droMoj3
CACAACCACTTGATCAATTCGATGAAACCAATAAGGAAACCTACGAAATGGTTAGTGGA----------------------AAATATAATA---------------------------------------------------------------------------------------------------------------------------------TA---------------TA--------------T--------------GTAT---A--TATATGTATGTATATATGATGATTTGTC----TC--TGGT---TTAGCGTTATTTTATCAATGACGAATTCCAAACGGAAGGCAGCCCAATATTCATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................GACGAATTCCAAACGGAAGGCAGCCC.........2612.002000002
.........................................................................................................................................................................................................................................................................................................................................................ATTCCAAACGGAAGGCAGC...........1911.001100000
................................................................................................................................................................................................................................................................................................................................................CAATGACGAATTCCAAACGG...................2011.001100000
..............................................................................................................................................................................................................................................................................................................................................................AAACGGAAGGCAGCCCAAT......1911.001100000
.........................................................................................................................................................................................................................................................................................................................................................ATTCCAAACGGAAGGCAGCCCA........2211.001100000
.........................................................................................................................................................................................................................................................................................................................................ATTTTATCAATGACGAATTCC.........................2111.001100000
...................CGATGAAACCAATAAGGAAAC...............................................................................................................................................................................................................................................................................................................................................2111.001000100
............................................................................................................................................................................................................................................................................................................................................................CCAAACGGAAGGCAGCCCAA.......2011.001100000
....ACCACTTGATCAATTCGATG...............................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................................................................................................................................................................................ATTCCAAACGGAAGGCAGCCCAAT......2411.001100000
.......ACTTGATCAATTCGATGAAACCAATAAG....................................................................................................................................................................................................................................................................................................................................................2811.001100000
...........................................................................................................................................................................................................................................................................................................................................................TCCAAACGGAAGGCAGCCC.........1911.001100000
droGri2
CACAGCCACTTGATCACTTTGATGAAAGCAATGAGAAGACTTACCAAATGGTAAGAACA---------TT-------TTAAAAA-------------------------------------------------------------------------------CAATATTCTGAACCA-----------------------------------------------------------CAT-------------------------ATTTTAT---A--A-----------------------A----CTTTT--ACTTTATGTAGCGCTATTTGATCAACGATGAATTCCAAACTGAGGGCAGTCCAATTTTCATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/17/2015 at 11:39 PM