ID:

dya_914

 Coordinate:

3R:2204545-2204695 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.1 -12.7 -12.5 -12.3

Flybase annnotation

CDS [Dyak\GE25247-cds]; exon [dyak_GLEANR_8870:5]; intron [Dyak\GE25247-in]

Repeatable elements

NameClassFamilyStrand
Hoyak2DNAhAT-Ac+
DNAREP1_DYakRCHelitron-
mature
  1. 2L:21473433-21473458 -
  2. X:20925881-20925906 -
  3. 3R:470673-470698 -
  4. 3R:471497-471522 -
  5. dya_914  3R:2204643-2204668 -
  6. 3R:3310502-3310527 -
  7. 3R:28469685-28469710 -
  8. 4:1359233-1359258 -
  9. v2_chrUn_4388:4619-4644 -
  10. v2_chr2h_random_004:195973-195998 -
  11. v2_chr2h_random_004:995814-995839 -
  12. chrXh:153642-153667 -
  13. chr2h:409340-409365 -
  14. v2_chr2h_random_026:269229-269254 -
  15. v2_chrUn_004:533914-533939 -
  16. v2_chrUn_554:26619-26644 -
  17. v2_chrUn_554:29350-29375 -
  18. v2_chrUn_554:35214-35239 -
  19. v2_chrUn_554:42559-42584 -
  20. v2_chrUn_866:38444-38469 -
  21. 3L:22269914-22269939 +
  22. 2L:19651477-19651502 +
  23. 2L:20538981-20539006 +
  24. 2L:20764003-20764028 +
  25. 2L:20912766-20912791 +
  26. X:21015815-21015840 +
  27. 3R:4641608-4641633 +
  28. 4:964433-964458 +
  29. 4:1181191-1181216 +
  30. v2_chrUn_6371:28-53 +
  31. v2_chr2h_random_004:994125-994150 +
  32. v2_chrUn_6922:7481-7506 +
  33. v2_chrUn_6922:9420-9445 +
  34. dya_1272  chrYh:97394-97419 +
  35. v2_chr2L_random_028:409955-409980 +
  36. v2_chr3L_random_299:2460-2485 +
  37. v2_chr3h_random_002:463915-463940 +
  38. v2_chrUn_004:172924-172949 +
  39. v2_chrUn_673:134-159 +
  40. v2_chrUn_805:7505-7530 +
star
  1. 3L:45820-45837 +
  2. 2L:17032498-17032515 +
  3. 3R:369923-369940 +
  4. 3R:891191-891208 +
  5. 3R:2482695-2482712 +
  6. 3R:7020514-7020531 +
  7. 3R:13485895-13485912 +
  8. 3R:17519720-17519737 +
  9. v2_chrUn_1329:24705-24722 +
  10. v2_chrUn_1642:427-444 +
  11. v2_chrUn_1686:2456-2473 +
  12. v2_chrUn_5672:248-265 +
  13. v2_chrUn_6729:256-273 +
  14. v2_chr2h_random_004:38033-38050 +
  15. v2_chrUn_6995:59012-59029 +
  16. v2_chr2L_random_028:325400-325417 +
  17. v2_chr2L_random_028:1664749-1664766 +
  18. v2_chrUh_004:377627-377644 +
  19. v2_chrUn_240:5315-5332 +
  20. v2_chrUn_539:454-471 +
  21. 3L:23378024-23378041 -
  22. 2R:366852-366869 -
  23. 2R:750658-750675 -
  24. 2R:1106597-1106614 -
  25. 2R:3681384-3681401 -
  26. 3R:1216233-1216250 -
  27. dya_914  3R:2204589-2204606 -
  28. 3R:28469629-28469646 -
  29. v2_chrUn_4094:1372-1389 -
  30. v2_chrUn_1919:3059-3076 -
  31. v2_chrUn_2774:270-287 -
  32. v2_chrUn_4989:46474-46491 -
  33. v2_chrUn_3615:1661-1678 -
  34. v2_chr2h_random_004:490953-490970 -
  35. v2_chr2h_random_026:328982-328999 -
  36. v2_chr3R_random_037:3973-3990 -
  37. v2_chrUn_002:225773-225790 -
  38. v2_chrUn_002:240085-240102 -
  39. v2_chrUn_006:64859-64876 -
  40. v2_chrUn_217:3531-3548 -
  41. 2L:20600131-20600148 +
  42. 2L:21294179-21294196 +
  43. 2R:2460286-2460303 +
  44. 3R:1936173-1936190 +
  45. 3R:7507841-7507858 +
  46. 3R:7533949-7533966 +
  47. 3R:17713639-17713656 +
  48. 3R:27094674-27094691 +
  49. 4:938477-938494 +
  50. v2_chrUn_1201:396-413 +
  51. v2_chrUn_1236:17932-17949 +
  52. v2_chrUn_2182:1059-1076 +
  53. v2_chrUn_2628:447-464 +
  54. v2_chr2L_random_010:595602-595619 +
  55. v2_chr2L_random_028:1688396-1688413 +
  56. v2_chrX_random_047:4049-4066 +
  57. v2_chrUn_003:142609-142626 +
  58. v2_chrUn_005:17974-17991 +
  59. v2_chrUn_050:663-680 +
  60. v2_chrUn_866:21821-21838 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTGTCGCCGGGCCTGTCCAGAGACATAGACGCTGCGCAAGTTTGTTGATTCATGTTGCCAAGCCCACTCTATCGCCCACAAACCGCCAAAAACTGTCAGTGTTAAAAACTCTCCCGCACTTCCACTAGCTGAGTAACGGGTATCAGATAGTCGGGGAACTCGACTATAGCGTTCTCTCTTGTTTTTTATTTATTTCACCAGGTGCGAGCTCTGTGATGTTCACTACCGTCATAGATATAATCTAAACAAAC
*****************************************************************************..................((...............((((.((((.........))))..))))...............))********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V052
head
 V120
male body		 GSM1528802
follicle cells		 M056
embryo
........................................................................................................................................................................................TTTATTTATTTCACCAGGTGCGAG........................................... 24 0 1 1.00 1 1 0 0 0 0
.............................................................................ACAAACCGCCAAAAACTGTCAGTGTT.................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0 0
..................AGAGACATAGACGCTGCGCAAGT.................................................................................................................................................................................................................. 23 0 7 0.14 1 1 0 0 0 0
...............TCCAGAGACATAGACGCT.......................................................................................................................................................................................................................... 18 0 10 0.10 1 0 1 0 0 0
..............GTGAAGAGACATAGACGGT.......................................................................................................................................................................................................................... 19 3 10 0.10 1 0 0 1 0 0
.............................................................GCCCACTCTATCGCCCACAAACCG...................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................GTATCAGATAGTCGGGGA.............................................................................................. 18 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................TCGACTATAGCGTTCTCTCTTGTTTTTT................................................................ 28 0 20 0.05 1 0 0 0 0 1
........................................................................................................................................................................................................GGTGCGAGCCCTGGGAGG................................. 18 3 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................GGTGCGAGCCCTGGGA................................... 16 2 20 0.05 1 0 0 0 1 0
...............................................................CCACTCTATCGCCCACAAACC....................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
.................................GCGCAAGTTTGTTGATTCATGTTGCC................................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0
.....................................AAGTTTGTTGATTCATGTTGC................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

GACAGCGGCCCGGACAGGTCTCTGTATCTGCGACGCGTTCAAACAACTAAGTACAACGGTTCGGGTGAGATAGCGGGTGTTTGGCGGTTTTTGACAGTCACAATTTTTGAGAGGGCGTGAAGGTGATCGACTCATTGCCCATAGTCTATCAGCCCCTTGAGCTGATATCGCAAGAGAGAACAAAAAATAAATAAAGTGGTCCACGCTCGAGACACTACAAGTGATGGCAGTATCTATATTAGATTTGTTTG
**********************************************************************************************..................((...............((((.((((.........))))..))))...............))***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V120
male body		 M056
embryo
 V058
head
..................................................................................................................................................TATCAGCCCCTTGAGCTGATATCGC................................................................................ 25 0 20 0.60 12 12 0 0 0
..................TCTCTGTATCTGCGACGCGTTCAAACAAC............................................................................................................................................................................................................ 29 0 3 0.33 1 0 1 0 0
........................................................................................................................................................CCCCTTGAGCTGATATCGCAA.............................................................................. 21 0 20 0.25 5 5 0 0 0
...........................................................................................TGACACCCACAATGTTTGAGAG.......................................................................................................................................... 22 3 9 0.11 1 0 0 0 1
....................................GTTCAAACAACTGAGTACCACGGTTC............................................................................................................................................................................................. 26 2 11 0.09 1 0 0 1 0
.............................................................................................................AGAGGGCGTGAAGGTGATCGACT....................................................................................................................... 23 0 19 0.05 1 0 0 1 0
.................................CGCGTTCAAACAACTAAGTAC..................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
.........................................................................................................................GGTGATCGACTCATTGCCCATAG........................................................................................................... 23 0 20 0.05 1 1 0 0 0
..................................................................................GGCGGTTTTTGACAGTCACAAT................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0
..................................................................................GGCGGTTTTTGACAGTCA....................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0
..................................................................................GGCGGTTTTTGACAGTCACAATTT................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
...............................................................................TTTGGCGGTTTTTGACAGTCA....................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
....................................................................................CGGTTTTTGACAGTCACA..................................................................................................................................................... 18 0 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3R:2204495-2204745 - dya_914 CTGTCGCC-----------------GGGCCTGTCCAG--------AGACATA-----------------GAC-GCTGCGCAAGTTTGTTGATTCATG-----------------------TTGC--CAAGCCCACTCTATCGCCCACAAA------CCGC--CAAAAACTGT-CAG--------TGTTA-------------------------------------------------------------------AA----------------------------------------------------AACTCTCCCGCACTTCCACT-------------AGCT-------------------------------------------------------GAGTAACGGGTATCAGATAGTCGGGG-------------------AACTCGACTATAGC-GTTCTCTC----T--------------------TGT---TTTTTATTT---ATTTCACCAGGT---------GCGAGC-----------TCTG----------TGATGTTCACTACC-----GTCATAG-----A----TATAATCTAAACAAAC
droEre2 scaffold_4770:10658818-10659070 + CTTCCAGA--------------------------------------GACATA-----------------GAC-GCAGCGCAAGTTTGTGTCCAAATG-----------------------TTGC--CACGCCCACTCTAACGCCCACAAA------CTT---------TTC-CCCAATTTCTACCG----------------------------------------------------ATATTCCAGAAAATGCTAACATTTT-------------------------------T-------------------CGTTTGCACTTCCACT-------------AGCT-------------------------------------------------------GAGTAACGGGTATCTGATAGTCGGGGATATAGCA-----------TTCCCGACTATAGC-ATTCTATC----T--------------------TGT---TTTTTAAAT---CGAA----------------------A--------T--AACA----------TGAAGATTATACCC-----GTCATAG-----GC---ATTAATACAAACTAAA
droSec2 scaffold_92:135199-135468 + CGATAATA-----------------GGAACTATTAGAGCT-----AGACATA-----------------GAC-GTATCACAACTTTGTTTAATGATG-----------------------TTCG--CATGAC------------CACAAA------ACGC--CCAAAACTG-CGAAAATTGTGTCGATA-----------------------------------------------------------AAATGTTGACCTTTC-------------------------------T-------------------CTGTCGCGCTCCCAAT-------------AGC----------------------------------------------ACTAATGA--TAGTAATGGGTATCTGACAGTCGAGA-------------------AACTCAACTACAGC-GTTCTCTC----T--------------------TGT---GTCTACATATATAATTTAT--------------CTAAGT--------TTT---CTCAAATGC----------ACTATT-----TTC----AGTAAACATTCATCATCCAAAACAAT
droSim2 node_76011:6260-6532 - CGATAATA-----------------GAAACTATTAGAGCT-----AGACATA-----------------GAC-GTATCACAACTTTGTTGTTTAATG------------------ATG--TTCG--CATGAC------------CACAAA------ACGC--CCAAAACTG-CGAAAATTGTGTCGATA-----------------------------------------------------------AAATGTTGACCTTTC-------------------------------T-------------------CTGTTGCGCTCCCAAT-------------AGC----------------------------------------------ACTAATGA--TAGGAATGGGTATCTCACAGTCGAGA-------------------AACTTAACTACAGC-GTTCTCTC----T--------------------TGT---GTCTACATATATAATTTAT--------------GTATGT--------TTT---CTCAAATGC----------ACTATT-----TTC----AGTAAACATTCATCATCCAAAGCAAT
dm3 chr2L:17361681-17361939 - TGATCAATAT-------CAATAGCCGAGT-----CGATCT-----AGTCAAA-----------------AA--------------------AACTTT-----------------------TGGC--CACACCCACTCTAACTCCCTAAAA------CCGC--CCAAAACTAACTAATTTTCTGTCG----------------------------------------------------ATTT-GCAGA------AAACATTTT--------------------------------------------GCCA-CCACCACGCATTCTCACT-------------AGCT-------------------------------------------------------GAGTAACGGGTATCTGGTAGTCGGGG-------------------AACTTGACTATAGA-ATTCTCTT----T--------------------TGA---TTTATATTC---AATTGCTAAAG-TGTT---G--------------A---ACTA----------TGAAG--CATTACA-----ATAATA-----------GAGAAGTTGAACTAAA
droEug1 scf7180000409710:83361-83568 - TTGAGATT-----------------AAGC--------------------ATGAAGATTCTTGAGATCCCGGG-ACAGCGCAAGTTTATTTCTGCATT-----------------------CTGC--CACGACCACTCTAACGCCCACAAA------TCAC--GAAAAACGAA-AAT--------AGGTGAAATCTCGCGAACTATTTTAAAA----------------------------------------------------------------------------------------------------------------TTGTGT-------------AAAA-------------------------------------------------------CAGTAATGGGTATCTTATAGTCGCGA-------------------CAGTCGACTATAGC-GTTTCCTC----T--------------------TGT---TAATTGTGT---CATC---------------------------------------------------------------------------------------------------A
droBia1 scf7180000302073:19543-19749 + GTGTCTGCCGTCCACATA-----------------ACATCTACTGAA--ATA-----------------TCC-GTTAG---------------------------------------------------------------------GTG------GCGC--CTTAAA----------------------------------------------------------------ATATAGCTTT-GTTGC------TTATGTATC--------------------------------------------CCCATTTACCTTTTGCTCCCTTA-------------CGCT-------------------------------------------------------GAGTAAAGGGTATCTGATAGTCGTGG-------------------CACTCGGCCGTAGC-GTTCTTTC----T--------------------TGT---TTTCGTTTT---GTTTTATAAGTT-T----CGA----TAT--------------------------------AGTTTT-----TTAA---------------TAATTTAAA--CAC
droTak1 scf7180000413933:91270-91504 + CAATCGCCAC------------------------------------------------------------------------------------------------------------------------TC------------CAAAAA------TTGT--TCAAATCTG-------------------------ACAATTTATTTAAAAGCTGATACCCCCTCTCGGAAACAGTCGCTTA-GCTGC------TTGCATATC--------------------------------------------TTCATCTTCCCCGCACTACCTTT-------------AGCT-------------------------------------------------------CAGTAACGGGTATCTGATATT----------------------------CGACTATAGC-TCTCTTGT----TAGTATTGTAGTTTTTTATTTTCTTGGCTTTAGTCT---CA-------------------------------------CTT----------TGATGGCCAATTAA-----GCCATA------A----GCTAAGCCAAACAAAC
droEle1 scf7180000490466:8228-8512 + CTAGAGATTT------------------------GGGACT-----TGTCATGCAGATTCTAGTAATTCCTAA-CCATTGCAAGTTTATTTCAAACTCTGACACTAGCTTCTAGTGTTGGCTTTGCAGTTGGA------------CAGATG------GCGCCACCTAAACTT-CGATTGTTTTGTAGTGG-----------------------------------------------------------AAATACTTAG-----------------------------------------------------------GTTAAATTTTGTT-------------GGCT-------------------------------------------------------GATTAACGGGTACCTAATAGTCGGGG-------------------AACTCGAGTAAAGC-GTTCTTTC----T--------------------TGT---TTTCACTTT---AATTATTCAAT-CGTTTCCAT----GGC----AGA---TATA----------TGATGTTTTCGATT-----TTAAT--------------------AAAATTAA
droRho1 scf7180000779287:614-860 - GTTTTATT-----------------GTGTTTATCAATACCTATCGAAATGTA-----------------GAA-GC-------------------------------------------------------------------------AA------TTTT--TCAAATCGG-------------------------ACCATTCGTTAAAAAG---------------------------------------TTATGCGTGATC-------------------------------A-AAGTTTCTATCTCCATCTCCCTCGCACTCCCTTT-------------ACCT-------------------------------------------------------GAGTAACGGGTATCTGATAGTCGGGG-------------------TACCCGACTATAGC-GTTCTCTC----T--------------------TGT---TTTTTTATT---GATTTCTAATT-TTGTATCAT----CTT----TGA---C---------GTGATAATGGCTAATTTT-----TTTAT--------------AAATGCAATCTGAC
droFic1 scf7180000453906:655468-655616 + CTGC--------------------------------------------------------------------------GCAAGATTGTTAAGCATTT-----------------------GTGC--CACGCTCACTATTACGCACACCACCCTATGGGGC--GTATCAT---------------------------------------------------------------------------------------------C------------------------------------------------------TCCT--ATTGTTT-------------AATT-------------------------------------------------------GAGGAATGGGTATCTGATAGTCGATG-------------------CACTAGACTATAGC-GATCTCTCTTATT--------------------TGA---TT-----TT---ATTT---------------------------------------------------------------------------------------------------C
droKik1 scf7180000302366:604939-605061 + AAGCTAATA----------------AAAACTAGCACGAAT-----AAAAATT-----------------AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----TCG-----TTTTT---GGCTGAGTTACGAT-------------------------------------------------------AGATTTAAAATGCCAAGTGTAGGGGT-------------------AAACAGACTTTGGC-TTCCCTTC----T--------------------TGT---CTTTTATTT---AATTTA--------------------------------------------------------------------------------------------------
droAna3 scaffold_13117:3637925-3637999 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTACTGGGTATCATCTAGTCCAGA-------------------AACTCAACTCTACC-CTTTCCCT----T--------------------TCTTGTTTTATATTT---AATTCCA--------------GTTG------------------------------------------------------------------------------C
droBip1 scf7180000396379:18601-18856 + ATAAAGCTAT------------------------AGGATT-----TGGCATGGAGACTCCTACAATGAATCG-GTACTATG-----------------------------------------------------------------------------GC--C-----------------------------------------------------------------------GTAGGTTT-GTTGC------TAACAAACA--------------------------------------------AAAATTTA--TT---------------GCTGAGAATCCATACCGTTAAAGCTTAAACTTTAAAGGTTAGATAAATTCTGGGTGGAAAAGAT----GAGTAACGGGTATAATATAGCCGGGA-------------------AAC-TGACAATGGCCATCATTTC----T--------------------TGT---TTTT-ATTT---ATTTAGT--------------GTGGGG-----------TATGT---------TGAGTTTCTGAACC-----GCAA---------------TAAT----ACAACC
dp5 3:8130436-8130609 + TGTTCAAA-----------------GACT--------------------ATA-----------------AGAGCTGCTACAAGAATATTTCAAAACT-----------------------TTGC--CCCGCCCACTTCCGCCCCCACAAA------GGGC--GAAATAT---------------------------------------------------------------------------------------------C-------------------------------T-------------------TTGTCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGCGG--CGTTTGCCGGAGGAGA-----GCCATGCTGACTTAGTATCGGGTATAAC-GTTCCCCC----T--------------------CGT---TTTTTAATT-----------------------------------------------------------------------------------------------------------
droPer2 scaffold_59:410403-410633 - TTATATCC-----------------GGA----------------------------CTTCTGTGATATGTCA-CTGTTACGAGAATATTTCAGAACT-----------------------TTGC--CCCGCCCACTTCCGCCTCCACAAA------GAGC--GAAAATCTG--------------------------------------------------------------------------------------------------------------------------------------------------TGGCATCCACAAT-------------TTC----------------------------------------------AAAAATAACAAGAAAACGGAAAACGGAGAATAGAGG-------------------A---TGATTATATC-TTACTCGC----T--------------------CTG---TCTCTCTCT---AACACACAGGTT-T----CAT----GGTCGGT---TTT---GACTATTGC------------------------AAA------A----TATGAGTTCAAGGATC
droWil2 scf2_1100000004585:3106701-3106830 - TTGGTACGT--------AGACTC-------GACTA----------GT--ATG-----------------TAC-AGTAATCAAGTTTATTTAAGGGTT-----------------------TTGC--CACGCCCACTTTTGCCGCCGCAAG------TTAG--ATAAAACCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------TTT---CTTAAATAT----------TATACT-----A----------------GCTAGAGGTATCAAAT
droVir3 scaffold_12932:850547-850745 - CTTTAGCTGT-------AGGTCC-------TCCCAGTGC------------C-----------------TGC-GCAGATCGAGTTTGTTTCCGATAA-----------------------TCGA--TA-ACTTACTCCGTTTCCAAGTAA------TCGA--TAAAAAT-----------------------------------------------------------------------------------------------------------------------------------------------CTATATCGAAATCCTGTTTTTTGAGCAATCTTGGT------------------------------------------GCATTTGAT----GTTGGAAGGGTATCCCTTAGTCGGGA-------G-----------CTCCCGACTAGAAC-C-TCTTAC----T--------------------TGT---TTTT-ATTT---AATT----------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:1856867-1857023 - AAGTCGCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-----------------------------------------------------------AAGTATTGAAATATC-------------------------------T-------------------A--TT--GC------T-------------CCAA-------------------------------------------------------GGGTTCAGGGGATCTCGTAGTCGAGC-------A-----------GTCTCGACTAGAGC-TTTCTTAC----T--------------------TGT---TTTTTATAT---AACTGAT--------------GCGA-------------TCTG----------TGAGGCGCATAAAAATACGCGCTTAG-----A----AGAAATATAAATATAT
droGri2 scaffold_15110:2972628-2972809 - CCGAGCTA-----------------GAGA--------------------ATA-----------------AGAAACACCAAAATTGTAATC--------------------------------------------------------------------------------G-------------------------ACAACGTATTTTCATATTG-----------------------ATTT-----------------TCTTGCGATTAGTACGTGCTTACATTTGGGCGTGCAAA-------------AGCTAGAATAT--ACTTATC-------------AGCT-------------------------------------------------------GGGTTGAGGGTATATCGTAGTCGAGC-------T-----------CACTCGACTACAGC-CTTCTTAC----T--------------------TGT---TTTCCTTTT-----------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CTGTCGCC-----------------GGGCCTGTCCAG--------AGACATA-----------------GAC-GCTGCGCAAGTTTGTTGATTCATG-----------------------TTGC--CAAGCCCACTCTATCGCCCACAAA------CCGC--CAAAAACTGT-CAG--------TGTTA-------------------------------------------------------------------AA----------------------------------------------------AACTCTCCCGCACTTCCACT-------------AGCT-------------------------------------------------------GAGTAACGGGTATCAGATAGTCGGGG-------------------AACTCGACTATAGC-GTTCTCTC----T--------------------TGT---TTTTTATTT---ATTTCACCAGGT---------GCGAGC-----------TCTG----------TGATGTTCACTACC-----GTCATAG-----A----TATAATCTAAACAAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATTT---ATTTCACCAGGT---------GCGAG..............................................................................2411.00101000000000
.................................................................................................................................................ACAAA------CCGC--CAAAAACTGT-CAG--------TGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.15303000000000
...................................AG--------AGACATA-----------------GAC-GCTGCGCAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.14101000000000
................................TCCAG--------AGACATA-----------------GAC-GCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.10100001000000
.................................................................................................................................GCCCACTCTATCGCCCACAAA------CCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGATAGTCGGGG-------------------A.........................................................................................................................................................................18200.05101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTATAGC-GTTCTCTC----T--------------------TGT---TTTTT...............................................................................................................28200.05100100000000
...................................................................................................................................CCACTCTATCGCCCACAAA------CC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
............................................................................GCGCAAGTTTGTTGATTCATG-----------------------TTGC--C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
................................................................................AAGTTTGTTGATTCATG-----------------------TTGC--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
droEre2
CTTCCAGA--------------------------------------GACATA-----------------GAC-GCAGCGCAAGTTTGTGTCCAAATG-----------------------TTGC--CACGCCCACTCTAACGCCCACAAA------CTT---------TTC-CCCAATTTCTACCG----------------------------------------------------ATATTCCAGAAAATGCTAACATTTT-------------------------------T-------------------CGTTTGCACTTCCACT-------------AGCT-------------------------------------------------------GAGTAACGGGTATCTGATAGTCGGGGATATAGCA-----------TTCCCGACTATAGC-ATTCTATC----T--------------------TGT---TTTTTAAAT---CGAA----------------------A--------T--AACA----------TGAAGATTATACCC-----GTCATAG-----GC---ATTAATACAAACTAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................T-------------AGCT-------------------------------------------------------GAGTAACGGGTATCTGATAGTCGG...............................................................................................................................................................................................29200.1530000003
...................................................................................................................................................................................................................................................................TTTT-------------------------------T-------------------CGTTTGCACTTCCACT-------------AGC...............................................................................................................................................................................................................................................................................2490.1111000000
.TTCCAGA--------------------------------------GACATA-----------------GAC-GCAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1022000000
.................................................ATA-----------------GAC-GCAGCGCAAGTTTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
..............................................................................................................................................................................................................................................................................................................................TGCACTTCCACT-------------AGCT-------------------------------------------------------GAGTAACGGG.............................................................................................................................................................................................................26200.0511000000
.............................................................................................................................................................TT---------TTC-CCCAATTTCTACCG----------------------------------------------------ATAT.......................................................................................................................................................................................................................................................................................................................................................................................23200.0511000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AACGGGTATCTGATAGTC.................................................................................................................................................................................................18200.0510000010
.................................................................................................................................................................................................................................................................................................................................ACTTCCACT-------------AGCT-------------------------------------------------------GAGTAACGGGT............................................................................................................................................................................................................24200.0510000010
..............................................................................................................................................................T---------TTC-CCCAATTTCTACCG----------------------------------------------------ATATTCCA...................................................................................................................................................................................................................................................................................................................................................................................26200.0511000000
droSec2
CGATAATA-----------------GGAACTATTAGAGCT-----AGACATA-----------------GAC-GTATCACAACTTTGTTTAATGATG-----------------------TTCG--CATGAC------------CACAAA------ACGC--CCAAAACTG-CGAAAATTGTGTCGATA-----------------------------------------------------------AAATGTTGACCTTTC-------------------------------T-------------------CTGTCGCGCTCCCAAT-------------AGC----------------------------------------------ACTAATGA--TAGTAATGGGTATCTGACAGTCGAGA-------------------AACTCAACTACAGC-GTTCTCTC----T--------------------TGT---GTCTACATATATAATTTAT--------------CTAAGT--------TTT---CTCAAATGC----------ACTATT-----TTC----AGTAAACATTCATCATCCAAAACAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droSim2
CGATAATA-----------------GAAACTATTAGAGCT-----AGACATA-----------------GAC-GTATCACAACTTTGTTGTTTAATG------------------ATG--TTCG--CATGAC------------CACAAA------ACGC--CCAAAACTG-CGAAAATTGTGTCGATA-----------------------------------------------------------AAATGTTGACCTTTC-------------------------------T-------------------CTGTTGCGCTCCCAAT-------------AGC----------------------------------------------ACTAATGA--TAGGAATGGGTATCTCACAGTCGAGA-------------------AACTTAACTACAGC-GTTCTCTC----T--------------------TGT---GTCTACATATATAATTTAT--------------GTATGT--------TTT---CTCAAATGC----------ACTATT-----TTC----AGTAAACATTCATCATCCAAAGCAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................CAAAACTG-CGAAAATTGTGTCGATA-----------------------------------------------------------AAA..............................................................................................................................................................................................................................................................................................................................................................................2812.00200000020000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGTCGAGA-------------------AACTTAACTACAGC-GT.........................................................................................................................................................2812.00200000011000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACTACAGC-GTTCTCTC----T--------------------TGT---GTC.................................................................................................................2611.00100000000001000000
.......................................T-----AGACATA-----------------GAC-GTATCACAACTTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTACAGC-GTTCTC.....................................................................................................................................................1511.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGA--TAGGAATGGGTATCTCACAGTCGAGA-------------------..........................................................................................................................................................................2911.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGTCGAGA-------------------AACTTAACTA................................................................................................................................................................2111.00100000000010000000
...TAATA-----------------GAAACTATTAGAGCT-----AGACAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGTCGAGA-------------------AACTTAACTACAGC-G..........................................................................................................................................................2711.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGC-GTTCTCTC----T--------------------TGT---GT..................................................................................................................1911.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGC-GTTCTCTC----T--------------------TGT---GTC.................................................................................................................2111.00100000000100000000
...TAATA-----------------GAAACTATTAGAGCT-----AGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TAGGAATGGGTATCTCACAGTCGAGA-------------------..........................................................................................................................................................................2611.00100000001000000000
............................ACTATTAGAGCT-----AGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1530.33100000000001000000
dm3
TGATCAATAT-------CAATAGCCGAGT-----CGATCT-----AGTCAAA-----------------AA--------------------AACTTT-----------------------TGGC--CACACCCACTCTAACTCCCTAAAA------CCGC--CCAAAACTAACTAATTTTCTGTCG----------------------------------------------------ATTT-GCAGA------AAACATTTT--------------------------------------------GCCA-CCACCACGCATTCTCACT-------------AGCT-------------------------------------------------------GAGTAACGGGTATCTGGTAGTCGGGG-------------------AACTTGACTATAGA-ATTCTCTT----T--------------------TGA---TTTATATTC---AATTGCTAAAG-TGTT---G--------------A---ACTA----------TGAAG--CATTACA-----ATAATA-----------GAGAAGTTGAACTAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------GAGTAACGGGTATCTGGTAGTCGGG..............................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GGGTATCTGGTAGTCGGGG-------------------AAC.......................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................T-------------AGCT-------------------------------------------------------GAGTAACGGGTATCTGGTA....................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTT----T--------------------TGA---TTTATATT............................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GGTATCTGGTAGTCGGGG-------------------AAC.......................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TAACGGGTATCTGGTAGTCGGG..............................................................................................................................................................................................2221.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATTC---AATTGCTAAAG-TGTT---G--------------A---AC................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CAATAGCCGAGT-----CGATCT-----AGTCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTT---G--------------A---ACTA----------TGAAG--CATTACA-----ATAA.............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACTA----------TGAAG--CATTACA-----ATAATA-----------GAGAAGT.........3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TGTT---G--------------A---ACTA----------TGAAG--CA...........................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------GAGTAACGGGTATCTGGTAGTC.................................................................................................................................................................................................2321.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................T-------------AGCT-------------------------------------------------------GAGTAACGGGTATCTGGTAG...................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................ATTCTCACT-------------AGCT-------------------------------------------------------GAGTAACGGGT............................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTAACGGGTATCTGGTAGTCG................................................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................TCTCACT-------------AGCT-------------------------------------------------------GAGTAACGGG.............................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CAATAGCCGAGT-----CGATCT-----AGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTCGGGG-------------------AACTTGACTA................................................................................................................................................................19170.4170000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................T-------------AGCT-------------------------------------------------------GAGTAACGGGTATCTG.......................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000001010000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GAGTAACGGGTATCTGGTAGT..................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------GAGTAACGGGTATCTGGTAG...................................................................................................................................................................................................2130.3310000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................CCCACTCTAACTCCCTAAAA------CCGC--A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................CTAAAA------CCGC--CCAAAACTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........AT-------CAATAGCCGAGT-----CGATCT-----A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000020000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........T-------CAATAGCCGAGT-----CGATCT-----AGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........T-------CAATAGCCGAGT-----CGATCT-----AGTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......TAT-------CAATAGCCGAGT-----CGATCT-----A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------GAGTAACGGGTATCTGGTAGTCGC...............................................................................................................................................................................................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........T-------CAATAGCCGAGT-----CGATCT-----AG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TAAAA------CCGC--CCAAAACTAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TAGCCGAGT-----CGATCT-----AGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------GAGTAACGGGTATCTGGTAGTG.................................................................................................................................................................................................2360.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CT-------------AGCT-------------------------------------------------------GAGTAACGGGTATCT........................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------GAGTAACGGGTATCTGG......................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCACT-------------AGCT-------------------------------------------------------GAGTAACGGGTA...........................................................................................................................................................................................................21170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................T-------------AGCT-------------------------------------------------------GAGTAACGGGTATCTGGTAT...................................................................................................................................................................................................2590.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCACT-------------AGCT-------------------------------------------------------GAGTAACGGGTATCTG.......................................................................................................................................................................................................25100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CACT-------------AGCT-------------------------------------------------------GAGTAACGGGTA...........................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CACT-------------AGCT-------------------------------------------------------GAGTAACGGG.............................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CACT-------------AGCT-------------------------------------------------------GAGTAACGGGTAT..........................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------GAGTAACGGGTATCTGGTAGTCGGGA-------------------..........................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000
.................CAATAGCCGAGT-----CGATCT-----AG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCACT-------------AGCT-------------------------------------------------------GAGTAACGGGTATCT........................................................................................................................................................................................................24110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTCGGGG-------------------AACTTGACTAT...............................................................................................................................................................20160.0610000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTCGGGG-------------------AACTTGACTATA..............................................................................................................................................................21160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CACT-------------AGCT-------------------------------------------------------GAGTAACGGGTATCTG.......................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGG-------------------AACTTGACTATAG.............................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTCTT----T--------------------TGA---TTTACC..............................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................ACT-------------AGCT-------------------------------------------------------GAGTAACGGGT............................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.......................................................................................................................................................................................................................................................................................................................................ACT-------------AGCT-------------------------------------------------------GAGTAACGGGTATCT........................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................T-------------AGCT-------------------------------------------------------GAGTAACGGGTAT..........................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AT-------CAATAGCCGAGT-----CGATCT-----AG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
droEug1
TTGAGATT-----------------AAGC--------------------ATGAAGATTCTTGAGATCCCGGG-ACAGCGCAAGTTTATTTCTGCATT-----------------------CTGC--CACGACCACTCTAACGCCCACAAA------TCAC--GAAAAACGAA-AAT--------AGGTGAAATCTCGCGAACTATTTTAAAA----------------------------------------------------------------------------------------------------------------TTGTGT-------------AAAA-------------------------------------------------------CAGTAATGGGTATCTTATAGTCGCGA-------------------CAGTCGACTATAGC-GTTTCCTC----T--------------------TGT---TAATTGTGT---CATC---------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droBia1
GTGTCTGCCGTCCACATA-----------------ACATCTACTGAA--ATA-----------------TCC-GTTAG---------------------------------------------------------------------GTG------GCGC--CTTAAA----------------------------------------------------------------ATATAGCTTT-GTTGC------TTATGTATC--------------------------------------------CCCATTTACCTTTTGCTCCCTTA-------------CGCT-------------------------------------------------------GAGTAAAGGGTATCTGATAGTCGTGG-------------------CACTCGGCCGTAGC-GTTCTTTC----T--------------------TGT---TTTCGTTTT---GTTTTATAAGTT-T----CGA----TAT--------------------------------AGTTTT-----TTAA---------------TAATTTAAA--CACSizeHit CountTotal NormTotal
No Reads
droTak1
CAATCGCCAC------------------------------------------------------------------------------------------------------------------------TC------------CAAAAA------TTGT--TCAAATCTG-------------------------ACAATTTATTTAAAAGCTGATACCCCCTCTCGGAAACAGTCGCTTA-GCTGC------TTGCATATC--------------------------------------------TTCATCTTCCCCGCACTACCTTT-------------AGCT-------------------------------------------------------CAGTAACGGGTATCTGATATT----------------------------CGACTATAGC-TCTCTTGT----TAGTATTGTAGTTTTTTATTTTCTTGGCTTTAGTCT---CA-------------------------------------CTT----------TGATGGCCAATTAA-----GCCATA------A----GCTAAGCCAAACAAACSizeHit CountTotal NormTotal
No Reads
droEle1
CTAGAGATTT------------------------GGGACT-----TGTCATGCAGATTCTAGTAATTCCTAA-CCATTGCAAGTTTATTTCAAACTCTGACACTAGCTTCTAGTGTTGGCTTTGCAGTTGGA------------CAGATG------GCGCCACCTAAACTT-CGATTGTTTTGTAGTGG-----------------------------------------------------------AAATACTTAG-----------------------------------------------------------GTTAAATTTTGTT-------------GGCT-------------------------------------------------------GATTAACGGGTACCTAATAGTCGGGG-------------------AACTCGAGTAAAGC-GTTCTTTC----T--------------------TGT---TTTCACTTT---AATTATTCAAT-CGTTTCCAT----GGC----AGA---TATA----------TGATGTTTTCGATT-----TTAAT--------------------AAAATTAASizeHit CountTotal NormTotal
No Reads
droRho1
GTTTTATT-----------------GTGTTTATCAATACCTATCGAAATGTA-----------------GAA-GC-------------------------------------------------------------------------AA------TTTT--TCAAATCGG-------------------------ACCATTCGTTAAAAAG---------------------------------------TTATGCGTGATC-------------------------------A-AAGTTTCTATCTCCATCTCCCTCGCACTCCCTTT-------------ACCT-------------------------------------------------------GAGTAACGGGTATCTGATAGTCGGGG-------------------TACCCGACTATAGC-GTTCTCTC----T--------------------TGT---TTTTTTATT---GATTTCTAATT-TTGTATCAT----CTT----TGA---C---------GTGATAATGGCTAATTTT-----TTTAT--------------AAATGCAATCTGACSizeHit CountTotal NormTotal
No Reads
droFic1
CTGC--------------------------------------------------------------------------GCAAGATTGTTAAGCATTT-----------------------GTGC--CACGCTCACTATTACGCACACCACCCTATGGGGC--GTATCAT---------------------------------------------------------------------------------------------C------------------------------------------------------TCCT--ATTGTTT-------------AATT-------------------------------------------------------GAGGAATGGGTATCTGATAGTCGATG-------------------CACTAGACTATAGC-GATCTCTCTTATT--------------------TGA---TT-----TT---ATTT---------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotal
No Reads
droKik1
AAGCTAATA----------------AAAACTAGCACGAAT-----AAAAATT-----------------AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----TCG-----TTTTT---GGCTGAGTTACGAT-------------------------------------------------------AGATTTAAAATGCCAAGTGTAGGGGT-------------------AAACAGACTTTGGC-TTCCCTTC----T--------------------TGT---CTTTTATTT---AATTTA--------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTACTGGGTATCATCTAGTCCAGA-------------------AACTCAACTCTACC-CTTTCCCT----T--------------------TCTTGTTTTATATTT---AATTCCA--------------GTTG------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ATAAAGCTAT------------------------AGGATT-----TGGCATGGAGACTCCTACAATGAATCG-GTACTATG-----------------------------------------------------------------------------GC--C-----------------------------------------------------------------------GTAGGTTT-GTTGC------TAACAAACA--------------------------------------------AAAATTTA--TT---------------GCTGAGAATCCATACCGTTAAAGCTTAAACTTTAAAGGTTAGATAAATTCTGGGTGGAAAAGAT----GAGTAACGGGTATAATATAGCCGGGA-------------------AAC-TGACAATGGCCATCATTTC----T--------------------TGT---TTTT-ATTT---ATTTAGT--------------GTGGGG-----------TATGT---------TGAGTTTCTGAACC-----GCAA---------------TAAT----ACAACCSizeHit CountTotal NormTotal
No Reads
dp5
TGTTCAAA-----------------GACT--------------------ATA-----------------AGAGCTGCTACAAGAATATTTCAAAACT-----------------------TTGC--CCCGCCCACTTCCGCCCCCACAAA------GGGC--GAAATAT---------------------------------------------------------------------------------------------C-------------------------------T-------------------TTGTCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGCGG--CGTTTGCCGGAGGAGA-----GCCATGCTGACTTAGTATCGGGTATAAC-GTTCCCCC----T--------------------CGT---TTTTTAATT-----------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................TGTCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGCGG--C............................................................................................................................................................................................................252032.00640063700030000
...........................................................................................................................................................................................................................................................................................................................TGTCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGCGG--.............................................................................................................................................................................................................242030.85617000000061700
........................................................................................................................................................................T---------------------------------------------------------------------------------------------C-------------------------------T-------------------TTGTCGTGTCG--TTT-----------------------------------------------------------------AAT----ATT....................................................................................................................................................................................................................23203.106200000006200
......AA-----------------GACT--------------------ATA-----------------AGAGCTGCTACAAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000020
...TCAAA-----------------GACT--------------------ATA-----------------AGAGCTGCTACAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000020
........................................................................................TTCAAAACT-----------------------TTGC--CCCGCCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21201.553103100000000
..........................................................................................................................................................................................................................................................................................................................TTGTCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGCGG--C............................................................................................................................................................................................................26201.402800000002530
.......................................................................................TTTCAAAACT-----------------------TTGC--CCCGCCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22201.152302300000000
........................................................................................TTCAAAACT-----------------------TTGC--CCCGCCCACTTCCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28201.102202200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTAGTATCGGGTATAAC-G..........................................................................................................................................................2111.0010100000000
......AA-----------------GACT--------------------ATA-----------------AGAGCTGCTACAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000010
...........................................................................................AAAACT-----------------------TTGC--CCCGCCCACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.801601600000000
..........................................................................TGCTACAAGAATATTTCAAAACT-----------------------T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.801600000001600
......................................................................................................................................................................................................................................................................................................T-------------------TTGTCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAG..................................................................................................................................................................................................................23200.75150600000090
..........................................................................................................................................................................................................................................................................................................................TTGTCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAG..................................................................................................................................................................................................................22200.65130600000070
...........................................................................................................................................................................................................................................................................................................................TGTCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGC.................................................................................................................................................................................................................22200.601200000012000
.....................................................................................TATTTCAAAACT-----------------------TTGC--CCCGCCCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.4590090000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGGAGGAGA-----GCCATGCTG...............................................................................................................................................................................2150.4020200000000
......................................................................................................................................................................................................................................................................C-------------------------------T-------------------TTGTCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGC.................................................................................................................................................................................................................25200.3570700000000
..................................................................................................................................................................................................................................................................................................................................TCG--TTT-----------------------------------------------------------------AAT----ATTAGCGG--CGTTTG.......................................................................................................................................................................................................2330.3310100000000
.............................................................................................................................................................................................................................................................................................................................TCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGCGG--CGTT.........................................................................................................................................................................................................2630.3310000000100
.........................................................................................TCAAAACT-----------------------TTGC--CCCGCCCACTTCCGCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.2550050000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGACTTAGTATCGGGTATAAC-...........................................................................................................................................................2440.2510010000000
...........................................................................GCTACAAGAATATTTCAAAACT-----------------------T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2550500000000
.......................................................................................................................................................................AT---------------------------------------------------------------------------------------------C-------------------------------T-------------------TTGTCGTGTCG--TTT-----------------------------------------------------------------AAT----AT.....................................................................................................................................................................................................................2340.2510100000000
.............................................................................................................................................................................................................................................................................................................................TCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGC.................................................................................................................................................................................................................20200.2550500000000
...............................................................................................................................................................................................................................................................................................................................GTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGCGG--C............................................................................................................................................................................................................21200.2550500000000
.......................................................................................TTTCAAAACT-----------------------TTGC--CCCGCCCACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2040040000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGGAGGAGA-----GCCATGC.................................................................................................................................................................................1960.1710100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TAGCGG--CGTTTGCCGGAGGA...............................................................................................................................................................................................2060.1710100000000
........................................................................................TTCAAAACT-----------------------TTGC--CCCGCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530030000000
........................................................................................TTCAAAACT-----------------------TTGC--CCCGCCCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530030000000
...........................................................................................................................................................................................................................................................................................................................TGTCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAG..................................................................................................................................................................................................................21200.1530000000300
..............................................................................................................................................................................................................................................................................................................................CGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGCG................................................................................................................................................................................................................20200.1530000003000
.........................................................................................TCAAAACT-----------------------TTGC--CCCGCCCACTTCCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000101000
..............................................................................................ACT-----------------------TTGC--CCCGCCCACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020200000000
..........................................................................................................................GC--CCCGCCCACTTCCGCCCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020002000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGCCGGAGGAGA-----GCCAT...................................................................................................................................................................................21100.1010100000000
..........................................................................TGCTACAAGAATATTTCAAAACT-----------------------TTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020200000000
................................................................................................T-----------------------TTGC--CCCGCCCACTTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
..........................................................................TGCTACAAGAATATTTCAAAACT-----------------------TTGC--CC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.0510100000000
.................................................................................................................................................................................................................................................................................................................................GTCG--TTT-----------------------------------------------------------------AAT----ATTAGCGG--.............................................................................................................................................................................................................18200.0510100000000
..................................................................................GAATATTTCAAAACT-----------------------TTGC--C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.....................................................................................TATTTCAAAACT-----------------------TTGC--CCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010000000
............................................................................................AAACT-----------------------TTGC--CCCGCCCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
..................................................................................GAATATTTCAAAACT-----------------------TTGC--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.............................................................................TACAAGAATATTTCAAAACT-----------------------T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.............................................................................................................................................................................................................................................................................................................................TCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGCGG--CGT..........................................................................................................................................................................................................25200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTAGTATCGGGTATA..............................................................................................................................................................18200.0510100000000
.............................................................................................AACT-----------------------TTGC--CCCGCCCACTTCCGCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010000000
............................................................................................................................................................................................................................................................................................................................GTCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGCGG--CGT..........................................................................................................................................................................................................26200.0510000000100
...................................................................................AATATTTCAAAACT-----------------------TTGC--CCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010000000
..................................................................................GAATATTTCAAAACT-----------------------TTGC--CC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
...........................................................................................................................................................................................................................................................................................................................TGTCGTGTCG--TTT-----------------------------------------------------------------AAT----ATTAGCGG--CG...........................................................................................................................................................................................................26200.0510000010000
..........................................................................TGCTACAAGAATATTTCAAAACT-----------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000010
.................................................................................AGAATATTTCAAAACT-----------------------TTGC--C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
........................................................................................................................................................................T---------------------------------------------------------------------------------------------C-------------------------------T-------------------TTGTCGTGTCG--TTT-----------------------------------------------------------------AA............................................................................................................................................................................................................................19200.0510000000010
droPer2
TTATATCC-----------------GGA----------------------------CTTCTGTGATATGTCA-CTGTTACGAGAATATTTCAGAACT-----------------------TTGC--CCCGCCCACTTCCGCCTCCACAAA------GAGC--GAAAATCTG--------------------------------------------------------------------------------------------------------------------------------------------------TGGCATCCACAAT-------------TTC----------------------------------------------AAAAATAACAAGAAAACGGAAAACGGAGAATAGAGG-------------------A---TGATTATATC-TTACTCGC----T--------------------CTG---TCTCTCTCT---AACACACAGGTT-T----CAT----GGTCGGT---TTT---GACTATTGC------------------------AAA------A----TATGAGTTCAAGGATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCT---AACACACAGGTT-T----CAT----GGTCGGT---.....................................................................27200.70141400000
.......................................................................................................................................TTCCGCCTCCACAAA------GAGC--GA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000100
................................................................................................................................................CACAAA------GAGC--GAAAATCTG--------------------------------------------------------------------------------------------------------------------------------------------------TGGCATCC....................................................................................................................................................................................................................................................................................................27200.102020000
.......................................................................................TTTCAGAACT-----------------------TTGC--CCCGCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.091010000
........................................................................................TTCAGAACT-----------------------TTGC--CCCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18120.081010000
...............................................................GATATGTCA-CTGTTACGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.061100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGC----T--------------------CTG---TCTCTCTCT---AACACAC.................................................................................................24200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----T--------------------CTG---TCTCTCTCT---AACACA..................................................................................................20200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGC------------------------AAA------A----TATGAGTTCAAG....20200.051000001
......CC-----------------GGA----------------------------CTTCTGTGATATGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
......CC-----------------GGA----------------------------CTTCTGTGATATGTCA-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
.................................................................................................................................................ACAAA------GAGC--GAAAATCTG--------------------------------------------------------------------------------------------------------------------------------------------------TGGCATCC....................................................................................................................................................................................................................................................................................................26200.051100000
..................................................................................................................................................CAAA------GAGC--GAAAATCTG--------------------------------------------------------------------------------------------------------------------------------------------------TGG.........................................................................................................................................................................................................................................................................................................20200.051000001
droWil2
TTGGTACGT--------AGACTC-------GACTA----------GT--ATG-----------------TAC-AGTAATCAAGTTTATTTAAGGGTT-----------------------TTGC--CACGCCCACTTTTGCCGCCGCAAG------TTAG--ATAAAACCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------TTT---CTTAAATAT----------TATACT-----A----------------GCTAGAGGTATCAAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CTTTAGCTGT-------AGGTCC-------TCCCAGTGC------------C-----------------TGC-GCAGATCGAGTTTGTTTCCGATAA-----------------------TCGA--TA-ACTTACTCCGTTTCCAAGTAA------TCGA--TAAAAAT-----------------------------------------------------------------------------------------------------------------------------------------------CTATATCGAAATCCTGTTTTTTGAGCAATCTTGGT------------------------------------------GCATTTGAT----GTTGGAAGGGTATCCCTTAGTCGGGA-------G-----------CTCCCGACTAGAAC-C-TCTTAC----T--------------------TGT---TTTT-ATTT---AATT----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................TCTTGGT------------------------------------------GCATTTGAT----GTTGGA.................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TCCTGTTTTTTGAGCAATCTTGGT------------------------------------------GCA.................................................................................................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................C-GCAGATCGAGTTTGTTTCCGATAA-----------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153000000003000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGACTAGAAC-C-TCTTAC----T--------------------TG........................................................................................................................21200.153003000000000000000000000000000000000000000000000000000000000000
....................................TGC------------C-----------------TGC-GCAGATCGAGTTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000002000000000000000000000000000000000000000000000000000000
......................................................................................GTTTCCGATAA-----------------------TCGA--TA-ACTTACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000010000000000000000000000000000000
......................C-------TCCCAGTGC------------C-----------------TGC-GCAGATCGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................TCCGTTTCCAAGTAA------TCGA--TAAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000001000000000000000000000000000000000
.........................................................................................TCCGATAA-----------------------TCGA--TA-ACTTACTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000100000000000000000000000000000000000
...................................................................................TTTGTTTCCGATAA-----------------------TCGA--TA-A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCGACTAGAAC-C-TCTTAC----T--------------------TGT---....................................................................................................................24200.051000000000000000000000000000000001000000000000000000000000000000
droMoj3
AAGTCGCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-----------------------------------------------------------AAGTATTGAAATATC-------------------------------T-------------------A--TT--GC------T-------------CCAA-------------------------------------------------------GGGTTCAGGGGATCTCGTAGTCGAGC-------A-----------GTCTCGACTAGAGC-TTTCTTAC----T--------------------TGT---TTTTTATAT---AACTGAT--------------GCGA-------------TCTG----------TGAGGCGCATAAAAATACGCGCTTAG-----A----AGAAATATAAATATATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGACTAGAGC-TTTCTTAC----T--------------------T.........................................................................................................................22200.204000040
................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTAGTCGAGC-------A-----------GTCTCGAC..................................................................................................................................................................21200.102000020
..............................................................................................................................................................................................................................................................TGAAATATC-------------------------------T-------------------A--TT--GC------T-------------CCAA-------------------------------------------------------GGG....................................................................................................................................................................................................................23200.051000001
.......GA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-----------------------------------------------------------AAGTATTGAAATATC-------------------------------T-------------------A--TT--GC------T-------------C.................................................................................................................................................................................................................................................................................27200.051000010
.................................................................................................................................................................................................................................................................................................................................GC------T-------------CCAA-------------------------------------------------------GGGTTCAGGGGATCTCGTA....................................................................................................................................................................................................26200.051010000
droGri2
CCGAGCTA-----------------GAGA--------------------ATA-----------------AGAAACACCAAAATTGTAATC--------------------------------------------------------------------------------G-------------------------ACAACGTATTTTCATATTG-----------------------ATTT-----------------TCTTGCGATTAGTACGTGCTTACATTTGGGCGTGCAAA-------------AGCTAGAATAT--ACTTATC-------------AGCT-------------------------------------------------------GGGTTGAGGGTATATCGTAGTCGAGC-------T-----------CACTCGACTACAGC-CTTCTTAC----T--------------------TGT---TTTCCTTTT-----------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:42 PM