ID:

dya_89

 Coordinate:

X:1528094-1528156 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.6 -37.3 -37.3

Flybase annnotation

utr3 [utr3_minus_9718]

No Repeatable elements found

Sense Strand Reads

CTCCTTGCAACTTAAGAGAGAGACCAAGTGCAAAGCATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAAAAAATTCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCTCAAGGCCGCCCTCGGATCTACGCTTGT

***********************************..(((.(((....(((((((((((((.(((((((((((((...........))).)))))))))).))))))))))).))...))).)))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total M026

head

 M056

embryo

 V058

head

 V052

head

 M043

female body

 V046

embryo

 V120

male body		 SRR1275484

Male prepupae
............................................................................................TTCGTTGTCGACGAAACCTGCA................................................. 22 0 1 5137.00 5137 1672 1899 646 369 482 64 4 1
............................................................................................TTCGTTGTCGACGAAACCTGC.................................................. 21 0 1 4500.00 4500 1798 543 1093 669 316 69 12 0
............................................................................................TTCGTTGTCGACGAAACCTG................................................... 20 0 1 2374.00 2374 2014 16 135 89 119 1 0 0
..................................................CGGGTTTCGTTAGCAGCGGGCT........................................................................................... 22 0 1 823.00 823 496 167 26 13 1 117 3 0
............................................................................................TTCGTTGTCGACGAAACCTGCAA................................................ 23 1 1 451.00 451 243 108 52 28 16 4 0 0
............................................................................................TGCGTTGTCGACGAAACCTGCA................................................. 22 1 1 276.00 276 0 274 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCT................................................. 22 1 1 225.00 225 189 13 11 5 7 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCAC................................................ 23 1 1 176.00 176 149 21 2 2 2 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCAT................................................ 23 0 1 153.00 153 43 13 57 31 6 3 0 0
............................................................................................TTCGTTGTCGACGAAACCT.................................................... 19 0 1 149.00 149 104 1 16 14 14 0 0 0
..................................................CGGGTTTCGTTAGCAGCGGGCC........................................................................................... 22 1 1 146.00 146 92 54 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACC..................................................... 18 0 1 121.00 121 88 33 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCC................................................. 22 1 1 108.00 108 55 16 29 8 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGT.................................................. 21 1 1 94.00 94 5 0 61 27 1 0 0 0
............................................................................................TGCGTTGTCGACGAAACCTGC.................................................. 21 1 1 92.00 92 0 89 3 0 0 0 0 0
..................................................CGGGTTTCGTTAGCAGCGGGC............................................................................................ 21 0 1 91.00 91 54 18 5 2 0 9 2 1
............................................................................................TTCTTTGTCGACGAAACCTGCA................................................. 22 1 1 86.00 86 62 23 0 0 1 0 0 0
............................................................................................TTAGTTGTCGACGAAACCTGCA................................................. 22 1 1 79.00 79 0 78 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCG................................................. 22 1 1 71.00 71 62 1 5 2 1 0 0 0
.............................................................................................TCGTTGTCGACGAAACCTGCA................................................. 21 0 1 58.00 58 4 1 6 0 46 1 0 0
............................................................................................TTCTTTGTCGACGAAACCTGCAA................................................ 23 2 1 47.00 47 45 2 0 0 0 0 0 0
.............................................................................................TCGTTGTCGACGAAACCTGC.................................................. 20 0 1 44.00 44 1 0 3 0 40 0 0 0
..................................................CTGGTTTCGTTAGCAGCGGGCT........................................................................................... 22 1 1 40.00 40 0 40 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGG.................................................. 21 1 1 31.00 31 29 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACTAAACCTGC.................................................. 21 1 1 30.00 30 15 0 10 4 0 0 1 0
............................................................................................TTCGTTGTGGACGAAACCTGCA................................................. 22 1 1 28.00 28 0 0 0 0 28 0 0 0
............................................................................................TTCGTTGTCGACTAAACCTGCA................................................. 22 1 1 26.00 26 22 0 4 0 0 0 0 0
............................................................................................TTAGTTGTCGACGAAACCTGC.................................................. 21 1 1 23.00 23 0 20 3 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAACCCTGC.................................................. 21 1 1 23.00 23 0 0 22 1 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCAG................................................ 23 1 1 21.00 21 11 1 4 3 2 0 0 0
............................................................................................TTCGTTGTCGACCAAACCTGCA................................................. 22 1 1 20.00 20 13 2 3 2 0 0 0 0
............................................................................................TTCTTTGTCGACGAAACCTGCAT................................................ 23 1 1 20.00 20 20 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGCCGAAACCTGCA................................................. 22 1 1 19.00 19 0 12 5 2 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTTC.................................................. 21 1 1 18.00 18 0 0 11 7 0 0 0 0
..................................................CTGGTTTCGTTAGCAGCGGGCC........................................................................................... 22 2 1 18.00 18 0 18 0 0 0 0 0 0
............................................................................................TTCTTTGTCGACGAAACCTGC.................................................. 21 1 2 18.00 36 23 12 0 0 0 1 0 0
..................................................CGGGTTTCGTTAGCAGCGGGCG........................................................................................... 22 1 1 17.00 17 17 0 0 0 0 0 0 0
............................................................................................TGCGTTGTCGACGAAACCTGCAA................................................ 23 2 1 17.00 17 0 17 0 0 0 0 0 0
............................................................................................TTCCTTGTCGACGAAACCTGCA................................................. 22 1 1 17.00 17 15 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGACACCTGC.................................................. 21 1 1 16.00 16 1 2 11 2 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTCC.................................................. 21 1 1 16.00 16 1 0 10 4 1 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTAC.................................................. 21 1 1 15.00 15 9 6 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGA.................................................. 21 1 1 14.00 14 8 1 2 2 0 1 0 0
............................................................................................TTCGTTGTCGCCGAAACCTGC.................................................. 21 1 1 14.00 14 0 2 12 0 0 0 0 0
............................................................................................TTCCTTGTCGACGAAACCTGC.................................................. 21 1 1 13.00 13 13 0 0 0 0 0 0 0
............................................................................................TTCCTTGTCGACGAAACCTGCAA................................................ 23 2 1 12.00 12 12 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGCAACCTGC.................................................. 21 1 1 11.00 11 0 0 11 0 0 0 0 0
............................................................................................TTCTTTGTCGACGAAACCTG................................................... 20 1 2 11.00 22 22 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGACACCTGCA................................................. 22 1 1 11.00 11 0 1 7 3 0 0 0 0
............................................................................................TTCGTTGTCGACCAAACCTG................................................... 20 1 1 11.00 11 10 0 0 1 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCGG................................................... 20 1 1 11.00 11 11 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACTAAACCTG................................................... 20 1 1 11.00 11 8 0 3 0 0 0 0 0
............................................................................................TGCTTTGTCGACGAAACCTGCA................................................. 22 2 1 11.00 11 0 11 0 0 0 0 0 0
............................................................................................TTCGTTGGCGACGAAACCTGCA................................................. 22 1 1 10.00 10 2 0 6 2 0 0 0 0
.............................................................................................TTCTTGTCGACGAAACCTGCAA................................................ 22 3 1 10.00 10 10 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCGGC.................................................. 21 1 1 10.00 10 0 0 7 3 0 0 0 0
...........................................................................................CTTCGTTGTCGACGAAACCTGCA................................................. 23 1 1 10.00 10 5 5 0 0 0 0 0 0
..................................................CGGGTTTCGTTAGCAGCGGGCTT.......................................................................................... 23 1 1 9.00 9 8 1 0 0 0 0 0 0
............................................................................................TGCGTTGTCGACGAAACC..................................................... 18 1 1 9.00 9 0 9 0 0 0 0 0 0
............................................................................................TTCGTTGTAGACGAAACCTGCA................................................. 22 1 1 9.00 9 0 2 0 0 7 0 0 0
............................................................................................CTCGTTGTCGACGAAACCTGCA................................................. 22 1 1 9.00 9 3 5 0 1 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCCGC.................................................. 21 1 1 9.00 9 0 0 7 2 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGTA................................................. 22 1 1 9.00 9 2 3 3 1 0 0 0 0
............................................................................................TTCGTTGTCGACTAAACCTGCAA................................................ 23 2 1 9.00 9 8 0 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGCAACCTGCA................................................. 22 1 1 9.00 9 0 0 7 2 0 0 0 0
............................................................................................TTCGTTGTGGACGAAACCTGC.................................................. 21 1 1 8.00 8 0 0 0 0 8 0 0 0
............................................................................................TGAGTTGTCGACGAAACCTGCA................................................. 22 2 1 8.00 8 0 8 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAGCCTGCA................................................. 22 1 1 8.00 8 1 4 0 1 1 1 0 0
............................................................................................TTCGTTGTCAACGAAACCTGC.................................................. 21 1 1 8.00 8 1 2 1 3 0 1 0 0
............................................................................................TTCGTTGTCGACGAAACCC.................................................... 19 1 1 8.00 8 8 0 0 0 0 0 0 0
............................................................................................TTCGTGGTCGACGAAACCTGC.................................................. 21 1 1 8.00 8 2 3 0 3 0 0 0 0
.............................................................................................TCGTTGTCGACGAAACCTG................................................... 19 0 1 8.00 8 2 0 0 1 5 0 0 0
............................................................................................TTCGTTGTCGACGGAACCTGCA................................................. 22 1 1 8.00 8 0 2 2 3 0 1 0 0
............................................................................................TACGTTGTCGACGAAACCTGCA................................................. 22 1 1 8.00 8 0 5 0 1 2 0 0 0
............................................................................................TTCGTTGTCGACGAACCCTGCA................................................. 22 1 1 8.00 8 1 0 7 0 0 0 0 0
............................................................................................TTCGTTTTCGACGAAACCTGC.................................................. 21 1 1 8.00 8 0 5 1 2 0 0 0 0
.............................................................................................TCGTTGTCGACGAAACCTGCAA................................................ 22 1 1 8.00 8 8 0 0 0 0 0 0 0
............................................................................................TTCGGTGTCGACGAAACCTGC.................................................. 21 1 1 8.00 8 0 1 6 1 0 0 0 0
............................................................................................TTCGTTGTCGGCGAAACCTGC.................................................. 21 1 1 8.00 8 0 1 6 1 0 0 0 0
..............................................................................................CGTTGTCGACGAAACCTGC.................................................. 19 0 1 7.00 7 3 0 0 0 4 0 0 0
............................................................................................TTCGTTGGCGACGAAACCTGC.................................................. 21 1 1 7.00 7 0 0 5 1 0 1 0 0
............................................................................................TGCGTTGTCGACGAAACCTGCAC................................................ 23 2 1 7.00 7 0 7 0 0 0 0 0 0
............................................................................................TTCGTTGTCGTCGAAACCTGC.................................................. 21 1 1 7.00 7 0 0 6 0 0 1 0 0
............................................................................................TTCGTTGTCTACGAAACCTGCA................................................. 22 1 1 7.00 7 0 1 4 2 0 0 0 0
............................................................................................TTCGCTGTCGACGAAACCTGCA................................................. 22 1 1 7.00 7 2 2 3 0 0 0 0 0
............................................................................................TTCGTGGTCGACGAAACCTGCA................................................. 22 1 1 7.00 7 1 6 0 0 0 0 0 0
.................................................TCGGGTTTCGTTAGCAGCGGGC............................................................................................ 22 0 1 7.00 7 4 0 1 2 0 0 0 0
............................................................................................TTCGTTGTCGACCAAACCTGCAA................................................ 23 2 1 7.00 7 7 0 0 0 0 0 0 0
..................................................CGGGTTTCGTTAACAGCGGGCT........................................................................................... 22 1 1 7.00 7 1 0 2 4 0 0 0 0
............................................................................................TTTGTTGTCGACGAAACCTGCA................................................. 22 1 1 7.00 7 4 2 1 0 0 0 0 0
...............................................................................................TTTGTCGACGAAACCTGCAA................................................ 20 2 1 6.00 6 6 0 0 0 0 0 0 0
............................................................................................TTCGTTGTAGACGAAACCTGC.................................................. 21 1 1 6.00 6 0 1 1 0 4 0 0 0
............................................................................................TTCGTTGTCTACGAAACCTGC.................................................. 21 1 1 6.00 6 0 0 4 2 0 0 0 0
............................................................................................TTCGTTGTCGACGACACCTG................................................... 20 1 1 6.00 6 0 0 6 0 0 0 0 0
............................................................................................TTCGTTGTCGACGACACCTGCC................................................. 22 2 1 6.00 6 0 0 6 0 0 0 0 0
............................................................................................TTCGTTGTCAACGAAACCTGCA................................................. 22 1 1 6.00 6 2 0 3 1 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCCGCA................................................. 22 1 1 6.00 6 0 3 2 0 0 1 0 0
............................................................................................TTCGTTGTCGACGAAACCTT................................................... 20 1 1 6.00 6 0 1 3 1 1 0 0 0
............................................................................................TTCGTTGTTGACGAAACCTGCA................................................. 22 1 1 6.00 6 0 2 1 1 2 0 0 0
............................................................................................TTCGTTGTCGACAAAACCTG................................................... 20 1 1 6.00 6 6 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACTAAACCT.................................................... 19 1 1 6.00 6 5 0 0 1 0 0 0 0
............................................................................................TTCGTTGTCGACGAAAACTGC.................................................. 21 1 1 6.00 6 0 0 2 3 0 1 0 0
............................................................................................TTCGTTGTCGACGAAACCTTCA................................................. 22 1 1 6.00 6 0 1 3 2 0 0 0 0
............................................................................................TTCGTTGTCGACGAAAC...................................................... 17 0 1 6.00 6 0 0 6 0 0 0 0 0
............................................................................................TTCGTTGTGGACGAAACCTG................................................... 20 1 1 6.00 6 1 0 0 0 5 0 0 0
............................................................................................TTCCTTGTCGACGAAACCTG................................................... 20 1 1 6.00 6 5 0 1 0 0 0 0 0
...............................................................................................GTTGTCGACGAAACCTGC.................................................. 18 0 1 6.00 6 2 0 4 0 0 0 0 0
............................................................................................TTCGTTGTCGCCGAAACCTG................................................... 20 1 1 5.00 5 0 0 4 1 0 0 0 0
............................................................................................TTCGTTGCCGACGAAACCTGC.................................................. 21 1 1 5.00 5 2 1 2 0 0 0 0 0
............................................................................................TTCGTTGTCGAAGAAACCTG................................................... 20 1 1 5.00 5 4 0 0 1 0 0 0 0
............................................................................................TTCGTTGTCGACAAAACCTGC.................................................. 21 1 1 5.00 5 4 0 0 1 0 0 0 0
............................................................................................TTCGGTGTCGACGAAACCTGCA................................................. 22 1 1 5.00 5 0 3 2 0 0 0 0 0
..............................................................................................CGTTGTCGACGAAACCTGCA................................................. 20 0 1 5.00 5 0 1 1 0 3 0 0 0
..................................................CTGGTTTCGTTAGCAGCGGGC............................................................................................ 21 1 1 5.00 5 0 5 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAAACTG................................................... 20 1 1 5.00 5 4 0 0 1 0 0 0 0
............................................................................................TTCGTTGTCGACGAGACCTGC.................................................. 21 1 1 5.00 5 2 0 2 1 0 0 0 0
............................................................................................TTCGTTGGCGACGAAACCTG................................................... 20 1 1 5.00 5 1 0 4 0 0 0 0 0
.............................................................................................TCGTTGTCGACGAAACCT.................................................... 18 0 1 5.00 5 0 0 0 0 5 0 0 0
................................................................................................TTGTCGACGAAACCTGCA................................................. 18 0 1 5.00 5 4 0 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAAGCCTGC.................................................. 21 1 1 5.00 5 2 0 2 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCCT................................................ 23 1 1 5.00 5 3 0 0 2 0 0 0 0
............................................................................................TTCGTTGTCGGCGAAACCTGCA................................................. 22 1 1 5.00 5 1 1 2 1 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACTTGCA................................................. 22 1 1 5.00 5 1 3 0 1 0 0 0 0
...........................................................................................CTTCGTTGTCGACGAAACCTGC.................................................. 22 1 1 4.00 4 0 2 1 0 1 0 0 0
..................................................CGGGTTTCGTTAGCAGCGGG............................................................................................. 20 0 1 4.00 4 0 0 2 0 0 1 0 1
............................................................................................TTCGTTGTCGACGAATCCTGCA................................................. 22 1 1 4.00 4 0 4 0 0 0 0 0 0
............................................................................................TTCCTTGTCGACGAAACCTGCAC................................................ 23 2 1 4.00 4 4 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCACA............................................... 24 2 1 4.00 4 4 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGGAACCTGC.................................................. 21 1 1 4.00 4 0 1 1 1 0 1 0 0
............................................................................................TCCGTTGTCGACGAAACCTGCA................................................. 22 1 1 4.00 4 0 4 0 0 0 0 0 0
.............................................................................................TCGTTGTCGACGAAACCTGCAT................................................ 22 0 1 4.00 4 0 0 2 0 2 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCAAC............................................... 24 2 1 4.00 4 1 1 2 0 0 0 0 0
............................................................................................TTCGTTGACGACGAAACCTGCA................................................. 22 1 1 4.00 4 1 2 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCGGCA................................................. 22 1 1 4.00 4 0 1 3 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCCA................................................ 23 2 1 4.00 4 1 1 1 1 0 0 0 0
............................................................................................TTCCTTGTCGACGAAACCTGCAT................................................ 23 1 1 4.00 4 3 0 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACATGC.................................................. 21 1 1 4.00 4 2 0 1 1 0 0 0 0
............................................................................................TTCGTTTTCGACGAAACCTGCA................................................. 22 1 1 4.00 4 0 3 0 1 0 0 0 0
............................................................................................TTCTTTGTCGACGAAACCT.................................................... 19 1 2 3.50 7 6 0 1 0 0 0 0 0
............................................................................................TTCGTTGTCGCCGAACCCTGC.................................................. 21 2 1 3.00 3 0 0 3 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAACCCTG................................................... 20 1 1 3.00 3 0 0 3 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAACCCTGCC................................................. 22 2 1 3.00 3 0 0 2 1 0 0 0 0
............................................................................................TTAGTTGTCGACGAAACCTGCAA................................................ 23 2 1 3.00 3 0 3 0 0 0 0 0 0
............................................................................................TGAGTTGTCGACGAAACCTGC.................................................. 21 2 1 3.00 3 0 3 0 0 0 0 0 0
.............................................................................................TCGTTGTCAACGAAACCTGCA................................................. 21 1 1 3.00 3 0 0 0 0 3 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCAAA............................................... 24 2 1 3.00 3 1 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGGA................................................. 22 1 1 3.00 3 1 2 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGTAACCTGC.................................................. 21 1 1 3.00 3 0 0 3 0 0 0 0 0
............................................................................................TTCATTGTCGACGAAACCTGC.................................................. 21 1 1 3.00 3 2 0 0 1 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCG.................................................... 19 1 1 3.00 3 3 0 0 0 0 0 0 0
............................................................................................GTCGTTGTCGACGAAACCTGCA................................................. 22 1 1 3.00 3 1 2 0 0 0 0 0 0
..................................................CGGGTTTCTTTAGCAGCGGGCT........................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0
............................................................................................TACGTTGTCGACGAAACCTGC.................................................. 21 1 1 3.00 3 0 3 0 0 0 0 0 0
..................................................CGGGTTTCGTTAGCAGCGGGGT........................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0
............................................................................................TGCGTTGTCGACGAAACCTGCAT................................................ 23 1 1 3.00 3 0 2 1 0 0 0 0 0
............................................................................................TTCGTTGTCGAAGAAACCTGCA................................................. 22 1 1 3.00 3 1 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCAACGAAACCTG................................................... 20 1 1 3.00 3 2 0 0 1 0 0 0 0
............................................................................................TTCGTTGTCGACGAACCCTGCAA................................................ 23 2 1 3.00 3 0 0 3 0 0 0 0 0
............................................................................................TTCGTTATCGACGAAACCTGCA................................................. 22 1 1 3.00 3 1 1 0 1 0 0 0 0
............................................................................................TTCGTTGTCGACGAGACCTGCA................................................. 22 1 1 3.00 3 2 0 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCAAT............................................... 24 2 1 3.00 3 0 2 1 0 0 0 0 0
............................................................................................TTCATTGTCGACGAAACCTGCA................................................. 22 1 1 3.00 3 0 1 0 2 0 0 0 0
...........................................................................................CGTCGTTGTCGACGAAACCTGCA................................................. 23 2 1 3.00 3 0 3 0 0 0 0 0 0
............................................................................................TTCTTTGTCGACGAAACCTGCAC................................................ 23 2 1 3.00 3 3 0 0 0 0 0 0 0
..................................................CGGTTTTCGTTAGCAGCGGGCT........................................................................................... 22 1 1 3.00 3 1 2 0 0 0 0 0 0
............................................................................................TGCGTTGTCGACGAAACCTG................................................... 20 1 1 3.00 3 0 3 0 0 0 0 0 0
............................................................................................TTCGTTTTCGACGAAACCTG................................................... 20 1 1 3.00 3 2 0 0 1 0 0 0 0
............................................................................................ATCGTTGTCGACGAAACCTG................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGGAACCTG................................................... 20 1 1 3.00 3 1 0 1 0 1 0 0 0
............................................................................................CTCGTTGTCGACGAAACCTGC.................................................. 21 1 1 3.00 3 0 0 2 0 0 1 0 0
............................................................................................TTCGCTGTCGACGAAACCTGC.................................................. 21 1 1 3.00 3 0 0 1 2 0 0 0 0
..................................................CGGGGTTCGTTAGCAGCGGGCT........................................................................................... 22 1 1 3.00 3 0 2 0 0 0 1 0 0
............................................................................................TTCGTTGTCGATGAAACCTGCA................................................. 22 1 1 3.00 3 1 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACTAAACCTTC.................................................. 21 2 1 3.00 3 0 0 3 0 0 0 0 0
............................................................................................TTCGTTGTCTACGAAACCTTC.................................................. 21 2 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCTT................................................ 23 1 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................GTCGTTGTCGACGAAACCTGC.................................................. 21 1 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TTCATTGTCGACGAAACCT.................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGCCGAAACCTGCC................................................. 22 2 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TTCGTTGGCGACGAAACCGGC.................................................. 21 2 1 2.00 2 0 0 2 0 0 0 0 0
..................................................CGGGCTTCGTTAGCAGCGGGCT........................................................................................... 22 1 1 2.00 2 1 0 0 0 0 1 0 0
.............................................................................................TCCTTGTCGACGAAACCTGCA................................................. 21 1 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGTAACCTGCA................................................. 22 1 1 2.00 2 0 1 0 1 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTCCC................................................. 22 2 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAACCCTGT.................................................. 21 2 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TGCGTTGTCTACGAAACCTGCA................................................. 22 2 1 2.00 2 0 2 0 0 0 0 0 0
............................................................................................TGCGTTGTCGACGAAACCGGC.................................................. 21 2 1 2.00 2 0 0 1 1 0 0 0 0
............................................................................................TTCGTTCTCGACGAAACCTGC.................................................. 21 1 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TTCGTTGTCGATGAAACCTG................................................... 20 1 1 2.00 2 1 0 0 1 0 0 0 0
............................................................................................TTCGTTGTCGTCGAAACCTGCA................................................. 22 1 1 2.00 2 0 0 2 0 0 0 0 0
..................................................CGGGTTTCGTTAGCAGCTGGCT........................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TTCATTGTCGACGAAACCTG................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGACACCTGT.................................................. 21 2 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TTCGTTTTCGCCGAAACCTGC.................................................. 21 2 1 2.00 2 0 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCGATGAAACCTGC.................................................. 21 1 1 2.00 2 1 0 0 1 0 0 0 0
............................................................................................TTCGTTGTCGACAAAACCTGCA................................................. 22 1 1 2.00 2 0 1 1 0 0 0 0 0
............................................................................................TGCGTTGTCGACGACACCTGCA................................................. 22 2 1 2.00 2 0 2 0 0 0 0 0 0
..................................................CGGGTTTCGTTAGCACCGGGCC........................................................................................... 22 2 1 2.00 2 1 1 0 0 0 0 0 0
.................................................CGGGTTTTCGTTAGCAGCGGGCT........................................................................................... 23 3 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCAGCA................................................. 22 1 1 2.00 2 0 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGAC................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................TTCTTTGTCGACGAAACCTGCAAA............................................... 24 3 1 2.00 2 1 1 0 0 0 0 0 0
...................................................CGGTTTCGTTAGCAGCGGGCT........................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0
..................................................CGGGTTTCGTTAGCAGCGGGT............................................................................................ 21 1 1 2.00 2 1 0 0 0 0 1 0 0
............................................................................................TTCGTTGTCGACGAGACCTG................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACATGCA................................................. 22 1 1 2.00 2 0 0 1 1 0 0 0 0
..................................................CGGGTTTCTTTAGCAGCGGGCC........................................................................................... 22 2 1 2.00 2 1 1 0 0 0 0 0 0
...............................................................................................GTTGTCGACGAAACCTGCAA................................................ 20 1 1 2.00 2 1 0 0 1 0 0 0 0
...............................................................................................TTTGTCGACGAAACCTGCAT................................................ 20 1 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGTT................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCATA............................................... 24 1 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................ATCGTTGTCGACGAAACCTGC.................................................. 21 1 1 2.00 2 0 0 0 2 0 0 0 0
.............................................................................................TTCTTGTCGACGAAACCTGC.................................................. 20 2 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCTACGAAACCTG................................................... 20 1 1 2.00 2 1 0 1 0 0 0 0 0
............................................................................................TGCGTTGTCGACAAAACCTGCA................................................. 22 2 1 2.00 2 0 2 0 0 0 0 0 0
............................................................................................TTCGTCGTCGACGAAACCTGCA................................................. 22 1 1 2.00 2 0 1 1 0 0 0 0 0
............................................................................................TTCGTTGCCGACGAAACCTG................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................TGCGTTGTCGAAGAAACCTGCA................................................. 22 2 1 2.00 2 0 2 0 0 0 0 0 0
............................................................................................TTCGTGGTCGACGAAACCGGC.................................................. 21 2 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TTCGTCGGCGACGAAACCTGC.................................................. 21 2 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TGCGTTGTCGACGAAACCTGCT................................................. 22 2 1 2.00 2 0 2 0 0 0 0 0 0
............................................................................................TTCGTTGGCGACTAAACCTGC.................................................. 21 2 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACTAAACCTTCA................................................. 22 2 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TTCGTTGACGACGAAACCTG................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0
..................................................CGGGTCTCGTTAGCAGCGGGCT........................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAATCCTGC.................................................. 21 1 1 2.00 2 0 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGCAACCTG................................................... 20 1 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TGCGTTGTCGATGAAACCTGCA................................................. 22 2 1 2.00 2 0 2 0 0 0 0 0 0
...................................................GGGTTTCGTTAGCAGCGGGCT........................................................................................... 21 0 1 2.00 2 1 0 0 0 0 1 0 0
............................................................................................TGCGTTGACGACGAAACCTGCA................................................. 22 2 1 2.00 2 0 2 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTACA................................................. 22 1 1 2.00 2 0 0 1 0 0 1 0 0
..................................................CGGGTTTCGTTAGTAGCGGGCT........................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTA................................................... 20 1 1 2.00 2 1 0 0 1 0 0 0 0
..................................................CGGGTTTCGTTAGCATCGGGCT........................................................................................... 22 1 1 2.00 2 1 0 0 1 0 0 0 0
..................................................CGGGTTTCGTTAGCAGCGGGAC........................................................................................... 22 2 1 2.00 2 1 1 0 0 0 0 0 0
............................................................................................TTCGCTGTCGACGAAACCTGCAA................................................ 23 2 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................TTCGTTGCCGACGAAACCTGCA................................................. 22 1 1 2.00 2 1 0 1 0 0 0 0 0
..................................................CGGGTTTCGTTACCAGCGGGCT........................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAATCCTGCAA................................................ 23 2 1 2.00 2 0 2 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCATT............................................... 24 1 1 2.00 2 1 0 1 0 0 0 0 0
............................................................................................TTCGTTGTAGACGAAACCTG................................................... 20 1 1 2.00 2 0 0 0 0 2 0 0 0
............................................................................................TTCGTTGTCGCCGACACCTGC.................................................. 21 2 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACGATACCTCA.................................................. 21 3 1 2.00 2 0 0 1 1 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCAGC.................................................. 21 1 1 2.00 2 1 0 1 0 0 0 0 0
............................................................................................TGCGTTGTCGACGAAACCTGCC................................................. 22 2 2 1.50 3 0 3 0 0 0 0 0 0
...............................................................................................TTTGTCGACGAAACCTGC.................................................. 18 1 2 1.50 3 3 0 0 0 0 0 0 0
..................................................CAGATTTCGTCAGCAGCGGGCT........................................................................................... 22 3 3 1.33 4 4 0 0 0 0 0 0 0
............................................................................................TTCGCTCTCGACGAAACCAGCA................................................. 22 3 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TGCGCTGTCGACGAAACCTGCA................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTCCT................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................CTCGGTGTAGACGAAACCTGC.................................................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................................................TTCTTGTCGACGAAACCTGCAT................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................TTCGCTGTCGACGAAACCTG................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................TGCGTTGTCGACGAGACCTGT.................................................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTCGCTGTCGCCGAAACCTGC.................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................ATCGTTGTCTACGAAACCTACA................................................. 22 3 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTCGTTGCCGACGAAACCTTCAA................................................ 23 3 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCCCCC................................................. 22 3 1 1.00 1 0 0 0 1 0 0 0 0
..................................................CGGGTTTCGTTAGCAGCGAGG............................................................................................ 21 2 1 1.00 1 0 0 0 0 0 1 0 0
............................................................................................TTCGTTGTCGACGAAACGTGCC................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................TTCGCTATCGACGAAACCTGC.................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTAGTAGTCGACGAAACCTGC.................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................TTCGTTGTCCACGAAACCTGC.................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0
............................................................................................TTCGTTGGCGACGAAACCCGC.................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCCTC.................................................. 21 2 1 1.00 1 0 0 0 1 0 0 0 0
............................................................................................TTCGTTGACGACTAAACCTGCA................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
..................................................TGGGTTTCGTTAACAGCGGGC............................................................................................ 21 2 1 1.00 1 0 0 1 0 0 0 0 0
..................................................CGGGTTTCTCTAGCAGCGGACT........................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................TTCGTCGACGACGAAACCTGC.................................................. 21 2 1 1.00 1 0 0 0 1 0 0 0 0
............................................................................................TTCGTTGAAGACGAAACCTGCA................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................TTCGTTGTAGACGAAACCTGCAT................................................ 23 1 1 1.00 1 0 0 0 0 1 0 0 0
.............................................................................................TTGTTGTCGACGAAACCTGC.................................................. 20 1 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACTAACCCTGCA................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0 0
..................................................CGGGTTTCGTTAGCAGCGGTCT........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTCGATGTCGACGAAACCTGCA................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGACCCCTGC.................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACGTGGT................................................. 22 3 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTACAA................................................ 23 2 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTCGTTATCGACGAAACCTG................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0
............................................................................................TTCGGTGTCGTCGAAACCTGC.................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACTAAACCTGG.................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................TGCGTTTTCGACGAAACCTGC.................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................TTCCTTGTCGACGAAACCT.................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGCCGAAGACTGC.................................................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0
.................................................TCGGGGTTCGTTAGCAGCGGG............................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................TTAGTTGTGGACGAAACCTGCA................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCTC................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCCACGAAACCTT................................................... 20 2 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTCGTTGTCGTCGAAACCTGA.................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTCGGTGTCGACGAAACCTGCAA................................................ 23 2 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................TTCGTTGTGGACGAAACCTGCAA................................................ 23 2 1 1.00 1 0 0 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAAAAATGC.................................................. 21 2 1 1.00 1 0 0 0 1 0 0 0 0
............................................................................................TTCGGGGTCGACGAAACCTGCG................................................. 22 3 1 1.00 1 0 0 0 1 0 0 0 0
............................................................................................TTCGTTGGCTACGACACCTGCA................................................. 22 3 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCCG................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGACCCCTGT.................................................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................TTAGTTGTCGACGACACCTGCA................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTTCC................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................TGCGTTGTCGACGAAACCTAC.................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAATCTGCA................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................TTCGTTGGCGACGAAACCT.................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0

Anti-sense strand reads

GAGGAACGTTGAATTCTCTCTCTGGTTCACGTTTCGTAGGAGTGACTTCAGCCCAAAGCAATCGTCGCCCGACAAAATTTTTTAAGTTGTTCAAGCAACAGCTGCTTTGGACGTACGACACACCTTTTAGTTGCGAGTTCCGGCGGGAGCCTAGATGCGAACA

***********************************..(((.(((....(((((((((((((.(((((((((((((...........))).)))))))))).))))))))))).))...))).)))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total M026

head

 GSM1528802

follicle cells
..........................................................................................CCAAGCAACAGCTGCTTTGGACGT................................................. 24 1 1 1.00 1 1 0
............................................................................................................GGACGTACGACAAACC....................................... 16 1 4 0.25 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droYak3 X:1528044-1528206 - dya_89 confident CTCCTTGCA------ACT----------------------------TAAGAGA---------GAGACCAAGT------G-CAAAGCATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAAAAAAT--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACGCTCAAGGCCGCCCTCGGAT-----CTACGCTTG---T
droEre2 scaffold_4644:1660942-1661101 - der_13 confident CAACT-GCAACTGCAACT----------------------------TAAGAG---------GGCA-CCAACT------G-CAAAGCATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAAAT--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACGCTCTAGGCCGCC-TCGGAT-----CTAC---------
droSec2 scaffold_10:1477735-1477889 - dse_18 confident CTCCTTGCAACTCCAACT---------------------------------------------------------TAGG-ATAAACATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAAAT--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACGCTCAAGGCCACTTAAGGAT-----CCACGTTTC---T
droSim2 x:1540995-1541149 - dsi-mir-981 Known_mirbase CTCCTTGCAACTGCAACT---------------------------------------------------------TAGG-ATAAACATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAAAT--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACGCTCAAGGCCACCCAAAGAT-----CCACGTTTC---T
dm3 chrX:1682860-1683013 - dme-mir-981 Known_mirbase CTCCTTGCA-CTGCAACT---------------------------------------------------------TAGG-AGAAACATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAAAT--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACGCTCAAGGCCGCCCAAGGAT-----TCACGTTTT---T
droEug1 scf7180000408994:414293-414441 - ATCTATGT------------------------CAAGTGATTAATTTTA--AG---------GAC----AACTATAAAGCT-CCTCGATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTCTTTACTTT--------TCAACTAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACG--------------------------------CTTAA
droBia1 scf7180000301760:4274663-4274803 - CTCCTCAAA---------------A----------GTGAT----TTTAAAATTATAAAACGGA---------------A-ATAAAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTACACTCTTT--------TCAACGAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACG--------------------------------CT---
droTak1 scf7180000415704:1276936-1277060 - TT--------------------------------------------TAAAATA---------ATA-CCT------AAGA-ACAAAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTACGTACTTT--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACG--------------------------------CT---
droEle1 scf7180000491043:308361-308508 + TTTAATGTA--------TTCAGGAA----------GTGAT----TTTGATAT---------GATA-CT-------AATC-AAAGAAGTCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTATAACC-GT--------TTGACAAGTTCGTTGTCGACGAAACCTGCATACTGTGT-GGAAAGTCAACA--------------------------------TTAAA
droRho1 scf7180000779976:18393-18558 - AACATTCGA-A----------AACAGTGGTGTCATGTG--------TAATAA---------GAC----AACT---AATCTACCAAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTACAAC-AAT--------TGGACAAGTTCGTTGTCGACGAAACCTGCATACTGTGT-GGAAAATCAACAA---------CCCATCGAT-----ATA--TTCT---T
droFic1 scf7180000453253:126087-126223 - AAAC---------------------------------------------------------------A-------AAGTTACAAAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTTTATTGTTA--------TTAGCAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAACTCAACATTACAAGCAGCCG----TTACGATCT----------A
droKik1 scf7180000302398:393012-393113 + A---------------------------------------------------------------------------------GAAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGTCTATAAT------T--------TTAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAAACAACG--------------------------------TTCAA
droAna3 scaffold_12929:1586948-1587049 + dan_9 confident ---------------------------------------------------------------------------------------TCCTCACTGAAGCCGGGTTTCGTTAACAGCGGGCTGTCATTTCGAAA--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAATAACAACG--------------------------------TTTAA
droBip1 scf7180000396543:52368-52478 + T-----------------------------------------------------------------------------G-TGAATTATCCTCACTGAAGCCGGGTTTCGTTAACAGCGGACTGTCATTTCGAAA--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAATGACAACG--------------------------------TTTAA
dp5 XL_group1a:4258921-4259025 - dps-mir-981 Known_mirbase TG------------------------------------------------------------------------------CGAAAAATCCACATTGAAATCGGGTTTCGTTAACAGCGGGCTGTTATGAATAAA--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAGAAACAAC--------------------------------------
droPer2 scaffold_11:835055-835159 - dpe_26 confident TG------------------------------------------------------------------------------CGAAAAATCCACATTGAAATCGGGTTTCGTTAACAGCGGGCTGTTATGAATAAA--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAGAAACAAC--------------------------------------
droWil2 scf2_1100000004909:4683233-4683341 + dwi_23 confident --------------------------------------------------------------------------------------ATCCACACTGAAATCGGGTTTCGCTAGCAGCGGACTGTCATGATAAATGTGAAAAACAAACAAGTTCGTTGTCGACGAAACCTGCATCATGTGTCGGACAAACAGCT--------------------------------CT---
droVir3 scaffold_12942:51505-51599 + dvi-mir-981 Known_mirbase --------------------------------------------------------------------------------------ATCTACATTGAACTCAGATTTCGTCAGCAGCGGGCTGTGATGATT--A--------TGAACAAGTTCGTTGTCGACGAAACCTGCATACTGTGT-GGAGTGGCAAC--------------------------------------
droMoj3 scaffold_6328:4397492-4397588 + dmo_26 confident --------------------------------------------------------------------------------------ATCTACATTGAACTCAGGTTTCGTTAGCAACGGGCTGTGATGATTAAA--------AGAACAAGTTCGTTGTCGACGAAACCTGCATGCTATGT-GGAGAGGCAAC--------------------------------------
droGri2 scaffold_14853:795296-795391 + dgr_59 candidate-rescued ---------------------------------------------------------------------------------------TCCACATTGAGCTCGGGTTTCGTCAGCAGCGGGCTGTGATGACTA-A--------AAAACAAGTTCGTTGTCGACGAAACCTGCATACTGTGT-GGAGAGTCAACG-------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CTCCTTGCA------ACT----------------------------TAAGAGA---------GAGACCAAGT------G-CAAAGCATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAAAAAAT--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACGCTCAAGGCCGCCCTCGGAT-----CTACGCTTG---TSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCA..........................................................2215137.005137167248218996436964640010
......................................................................................................................................................TTCGTTGTCGACGAAACCTGC...........................................................2114500.0045001798316543696691093120000
......................................................................................................................................................TTCGTTGTCGACGAAACCTG............................................................2012374.00237420141191618913500000
....................................................................................................CGGGTTTCGTTAGCAGCGGGCT............................................................................................................221823.008234961167117132630000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA.........................................................231451.00451243161084285200000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCT..........................................................221225.00225189713051100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC.........................................................231176.0017614922102200000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT.........................................................231153.00153436133315700000
......................................................................................................................................................TTCGTTGTCGACGAAACCT.............................................................191149.001491041410141600000
....................................................................................................CGGGTTTCGTTAGCAGCGGGCC............................................................................................................221146.001469205400000000
......................................................................................................................................................TTCGTTGTCGACGAAACC..............................................................181121.001218803300000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCC..........................................................221108.0010855016082900000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGT...........................................................21194.00945100276100000
....................................................................................................CGGGTTTCGTTAGCAGCGGGC.............................................................................................................21191.00915401892520010
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCG..........................................................22171.0071621102500000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCA..........................................................21158.0058446110600000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGC...........................................................20144.0044140000300000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGG...........................................................21131.0031290100100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG.........................................................23121.0021112103400000
....................................................................................................CGGGTTTCGTTAGCAGCGGGCG............................................................................................................22117.0017170000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGA...........................................................21114.001480112200000
....................................................................................................CGGGTTTCGTTAGCAGCGGGCTT...........................................................................................................2319.00980100000000
......................................................................................................................................................TTCGTTGTCGACGAAACCC.............................................................1918.00880000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTG............................................................1918.00825001000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAA.........................................................2218.00880000000000
........................................................................................................................................................CGTTGTCGACGAAACCTGC...........................................................1917.00734000000000
...................................................................................................TCGGGTTTCGTTAGCAGCGGGC.............................................................................................................2217.00740002100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTT............................................................2016.00601101300000
......................................................................................................................................................TTCGTTGTCGACGAAAC...............................................................1716.00600000600000
.........................................................................................................................................................GTTGTCGACGAAACCTGC...........................................................1816.00620000400000
........................................................................................................................................................CGTTGTCGACGAAACCTGCA..........................................................2015.00503100100000
.......................................................................................................................................................TCGTTGTCGACGAAACCT.............................................................1815.00505000000000
..........................................................................................................................................................TTGTCGACGAAACCTGCA..........................................................1815.00541000000000
....................................................................................................CGGGTTTCGTTAGCAGCGGG..............................................................................................................2014.00400010200010
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCACA........................................................2414.00440000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAT.........................................................2214.00402000200000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAC........................................................2414.00410100200000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCCA.........................................................2314.00410101100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA........................................................2413.00310100100000
......................................................................................................................................................TTCGTTGTCGACGAAACCG.............................................................1913.00330000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAT........................................................2413.00300200100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGAC..........................................................2212.00220000000000
....................................................................................................CGGGTTTCGTTAGCAGCGGGT.............................................................................................................2112.00210010000000
.........................................................................................................................................................GTTGTCGACGAAACCTGCAA.........................................................2012.00210001000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGTT..........................................................2212.00220000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATA........................................................2412.00220000000000
.....................................................................................................GGGTTTCGTTAGCAGCGGGCT............................................................................................................2112.00210010000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTA............................................................2012.00210001000000
....................................................................................................CGGGTTTCGTTAGCAGCGGGAC............................................................................................................2212.00210100000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT........................................................2412.00210000100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCTC.........................................................2311.00110000000000
droEre2
CAACT-GCAACTGCAACT----------------------------TAAGAG---------GGCA-CCAACT------G-CAAAGCATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAAAT--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACGCTCTAGGCCGCC-TCGGAT-----CTAC---------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
......................................................................................................................................................TTCGTTGTCGACGAAACCTGC...........................................................21121489.00214894587911479954196520
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCA..........................................................2214377.004377978278584633124430
....................................................................................................CGGGTTTCGTTAGCAGCGGGCT............................................................................................................2211148.00114821745621310090
......................................................................................................................................................TTCGTTGTCGACGAAACCTG............................................................201730.00730235075024180
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA.........................................................231337.00337361051202380
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT.........................................................231235.0023522335011740
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCA..........................................................211113.00113102030080
......................................................................................................................................................TTCGTTGTCGACGAAACCTGT...........................................................211106.00106301901830
......................................................................................................................................................TTCGTTGTCGACGAAACCTGA...........................................................21196.009610600890
.......................................................................................................................................................TCGTTGTCGACGAAACCTGC...........................................................20195.0095460300460
....................................................................................................CGGGTTTCGTTAGCAGCGGGC.............................................................................................................21184.008413620720
......................................................................................................................................................TTCGTTGTCGACGAAACCT.............................................................19164.0064160300450
.........................................................................................................................................................GTTGTCGACGAAACCTGC...........................................................18140.004010000390
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCC..........................................................22133.0033021800130
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCT..........................................................22128.002853320150
.......................................................................................................................................................TCGTTGTCGACGAAACCTG............................................................19126.002624000020
........................................................................................................................................................CGTTGTCGACGAAACCTGC...........................................................19119.001930100150
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC.........................................................23118.00182540070
...................................................................................................TCGGGTTTCGTTAGCAGCGGGC.............................................................................................................22117.001700100160
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG.........................................................23116.001630300100
.....................................................................................................GGGTTTCGTTAGCAGCGGGCT............................................................................................................21114.001400101120
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCG..........................................................22112.001200100110
.........................................................................................................................................................GTTGTCGACGAAACCTGCA..........................................................19112.00121020090
........................................................................................................................................................CGTTGTCGACGAAACCTGCA..........................................................20110.00104010050
......................................................................................................................................................TTCGTTGTCGACGAAACCTT............................................................2019.0090010080
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA........................................................2418.0080010070
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAA.........................................................2218.0081110050
......................................................................................................................................................TTCGTTGTCGACGAAACC..............................................................1818.0081500020
....................................................................................................CGGGTTTCGTTAGCAGCGGGCC............................................................................................................2218.0080800000
......................................................................................................................................................TTCGTTGTCGACGAAACCTC............................................................2016.0061000050
....................................................................................................CGGGTTTCGTTAGCAGCGGG..............................................................................................................2015.0050010040
..........................................................................................................................................................TTGTCGACGAAACCTGCA..........................................................1815.0050000050
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT........................................................2414.0041010020
....................................................................................................CGGGTTTCGTTAGCAGCGGGT.............................................................................................................2113.0030010020
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCCA.........................................................2313.0030030000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAT........................................................2413.0030000030
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCT..........................................................2113.0031000020
......................................................................................................................................................TTCGTTGTCGACGAAACCTCA...........................................................2112.0020000020
.......................................................................................................................................................TCGTTGTCGACGAAACCT.............................................................1812.0022000000
........................................................................................................................................................CGTTGTCGACGAAACCTG............................................................1812.0021000010
....................................................................................................CGGGTTTCGTTAGCAGCGGGA.............................................................................................................2112.0020000020
.......................................................................................................................................................TCGTTGTCGACGAAACCTGA...........................................................2012.0021000010
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAG.........................................................2212.0021000010
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAGT........................................................2412.0020010010
.........................................................................................................................................................GTTGTCGACGAAACCTGCAA.........................................................2012.0020010010
........................................................................................................................................................CGTTGTCGACGAAACCTGCAA.........................................................2112.0021000010
...................................................................................................TCGGGTTTCGTTAGCAGC.................................................................................................................1812.0020000020
......................................................................................................................................................TTCGTTGTCGACGAAACTGC............................................................2061.3380000080
........................................................................................................................................................CGTTGTCGACGAAACCTGCC..........................................................2011.0010000010
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCATT........................................................2311.0011000000
droSec2
CTCCTTGCAACTCCAACT---------------------------------------------------------TAGG-ATAAACATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAAAT--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACGCTCAAGGCCACTTAAGGAT-----CCACGTTTC---TSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
......................................................................................................................................................TTCGTTGTCGACGAAACCTGC...........................................................21113672.00136722452218713218
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCA..........................................................2212713.00271340392762025
....................................................................................................CGGGTTTCGTTAGCAGCGGGCT............................................................................................................2211028.001028312501512
......................................................................................................................................................TTCGTTGTCGACGAAACCTG............................................................201551.0055115014396
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT.........................................................231372.003721364349
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA.........................................................231201.0020115310173
......................................................................................................................................................TTCGTTGTCGACGAAACCTGT...........................................................211162.00162610155
......................................................................................................................................................TTCGTTGTCGACGAAACCT.............................................................19194.0094120082
......................................................................................................................................................TTCGTTGTCGACGAAACCTGA...........................................................21180.008010079
....................................................................................................CGGGTTTCGTTAGCAGCGGGC.............................................................................................................21171.0071031751
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCA..........................................................21154.0054410112
.......................................................................................................................................................TCGTTGTCGACGAAACCTGC...........................................................20150.0050240125
.........................................................................................................................................................GTTGTCGACGAAACCTGC...........................................................18126.002600224
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCT..........................................................22121.002110218
.......................................................................................................................................................TCGTTGTCGACGAAACCTG............................................................19118.001816002
...................................................................................................TCGGGTTTCGTTAGCAGCGGGC.............................................................................................................22116.001601015
.....................................................................................................GGGTTTCGTTAGCAGCGGGCT............................................................................................................21115.001500510
....................................................................................................CGGGTTTCGTTAGCAGCGGG..............................................................................................................20111.00110047
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA........................................................2419.0090018
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG.........................................................2319.0090018
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC.........................................................2319.0090009
......................................................................................................................................................TTCGTTGTCGACGAAACCTGG...........................................................2118.0084004
......................................................................................................................................................TTCGTTGTCGACGAAACCTC............................................................2018.0080026
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCG..........................................................2218.0081016
........................................................................................................................................................CGTTGTCGACGAAACCTGCA..........................................................2017.0076001
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCC..........................................................2216.0060006
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAT.........................................................2215.0051004
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAA.........................................................2215.0052003
......................................................................................................................................................TTCGTTGTCGACGAAACCTGTT..........................................................2214.0040004
....................................................................................................CGGGTTTCGTTAGCAGCGGGCC............................................................................................................2213.0030012
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT........................................................2413.0031002
......................................................................................................................................................TTCGTTGTCGACGAAACCTT............................................................2013.0031002
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCTA.........................................................2312.0020002
........................................................................................................................................................CGTTGTCGACGAAACCTGC...........................................................1912.0021001
........................................................................................................................................................CGTTGTCGACGAAACCTG............................................................1812.0022000
...................................................................................................TCGGGTTTCGTTAGCAGCGGGCT............................................................................................................2312.0020002
...................................................................................................TCGGGTTTCGTTAGCAGCGGG..............................................................................................................2112.0020002
......................................................................................................................................................TTCGTTGTCGACGAAACCTGACC.........................................................2321.5030003
......................................................................................................................................................TTCGTTGTCGACGAAACCTGTC..........................................................2211.0010001
..........................................................................................................................................................TTGTCGACGAAACCTGCA..........................................................1811.0010001
....................................................................................................CGGGTTTCGTTAGCAGCGG...............................................................................................................1911.0010001
......................................................................................................................................................TTCGTTGTCGACGAAACCTGAC..........................................................2211.0010001
....................................................................................................CGGGTTTCGTTAGCAGCGGGCTT...........................................................................................................2311.0011000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATA........................................................2411.0010001
.........................................................................................................................................................GTTGTCGACGAAACCTGCAA.........................................................2011.0010001
.......................................................................................................................................................TCGTTGTCGACGAAACCT.............................................................1811.0010001
....................................................................................................CGGGTTTCGTTAGCAGCG................................................................................................................1811.0010001
....................................................................................................CGGGTTTCGTTAGCAGCGGT..............................................................................................................2011.0010001
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATTT.......................................................2511.0010001
.........................................................................................................................................................GTTGTCGACGAAACCTGCA..........................................................1911.0010001
......................................................................................................................................................TTCGTTGTCGACGAAACCGC............................................................2011.0010001
......................................................................................................................................................TTCGTTGTCGACGAAACCTCA...........................................................2111.0010001
....................................................................................................CGGGTTTCGTTAGCAGCGGGCTC...........................................................................................................2311.0010001
droSim2
CTCCTTGCAACTGCAACT---------------------------------------------------------TAGG-ATAAACATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAAAT--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACGCTCAAGGCCACCCAAAGAT-----CCACGTTTC---TSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
......................................................................................................................................................TTCGTTGTCGACGAAACCTG............................................................20119993.001999319743574731410800200100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGC...........................................................2119626.0096269295346554112001814012308002
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCA..........................................................2217704.0077047016503825022010526505906001
......................................................................................................................................................TTCGTTGTCGACGAAACCT.............................................................1913350.00335029028481441100000000102
....................................................................................................CGGGTTTCGTTAGCAGCGGGCT............................................................................................................2211660.001660113054080060000011001000
......................................................................................................................................................TTCGTTGTCGACGAAACC..............................................................1811162.0011629602130917800000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA.........................................................231893.0089384124520000020100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCT..........................................................221429.004294192700000010000000
....................................................................................................CGGGTTTCGTTAGCAGCGGGC.............................................................................................................211328.0032827943500800000200000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCG..........................................................221286.0028625732600000000000000
....................................................................................................CGGGTTTCGTTAGCAGCGGGCC............................................................................................................221226.0022617704900000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC.........................................................231172.001721670410000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGG...........................................................211154.001541500310000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCC..........................................................221131.001311212700000000100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT.........................................................231100.00100940010400000100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGT...........................................................211100.00100972010000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGA...........................................................21174.0074740000000000000000
...................................................................................................TCGGGTTTCGTTAGCAGCGGGC.............................................................................................................22173.0073710100000000100000
....................................................................................................CGGGTTTCGTTAGCAGCGGGCG............................................................................................................22155.00553402100000000000000
..........................................................................................................................................................TTGTCGACGAAACCTGCA..........................................................18136.0036321300000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCG.............................................................19132.0032320000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCC.............................................................19232.0064640000000000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCA..........................................................21129.0029210240200000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGC...........................................................20126.0026210040100000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTG............................................................19123.0023221000000000000000
..........................................................................................................................................................TTGTCGACGAAACCTGCAA.........................................................19121.0021210000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG.........................................................23121.0021200100000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA........................................................24119.0019160100000110000000
.........................................................................................................................................................GTTGTCGACGAAACCTGCA..........................................................19119.0019190000000000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAA.........................................................22117.0017160100000000000000
....................................................................................................CGGGTTTCGTTAGCAGCG................................................................................................................18116.0016000021400000000000
........................................................................................................................................................CGTTGTCGACGAAACCTG............................................................18113.0013130000000000000000
.........................................................................................................................................................GTTGTCGACGAAACCTGC...........................................................18111.0011110000000000000000
....................................................................................................CGGGTTTCGTTAGCAGCGG...............................................................................................................19110.0010000001000000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCT.............................................................1819.00950000400000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT........................................................2419.00990000000000000000
....................................................................................................CGGGTTTCGTTAGCAGCGGGCTT...........................................................................................................2318.00880000000000000000
........................................................................................................................................................CGTTGTCGACGAAACCTGC...........................................................1917.00750000100000100000
........................................................................................................................................................CGTTGTCGACGAAACCTGCA..........................................................2017.00770000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTT............................................................2017.00760010000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTC............................................................2017.00770000000000000000
....................................................................................................CGGGTTTCGTTAGCAGCGGGCTA...........................................................................................................2315.00511200000000100000
......................................................................................................................................................TTCGTTGTCGACGAAACT..............................................................1815.00550000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCACT........................................................2415.00550000000000000000
........................................................................................................................................................CGTTGTCGACGAAACCTGCAA.........................................................2115.00550000000000000000
....................................................................................................CGGGTTTCGTTAGCAGCGGG..............................................................................................................2015.00520000300000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAC.........................................................2214.00440000000000000000
.........................................................................................................................................................GTTGTCGACGAAACCTGCAA.........................................................2014.00430100000000000000
...................................................................................................TCGGGTTTCGTTAGCAGC.................................................................................................................1813.00310000200000000000
....................................................................................................CGGGTTTCGTTAGCAGCGGGAC............................................................................................................2213.00330000000000000000
...................................................................................................TCGGGTTTCGTTAGCAGCG................................................................................................................1913.00300000300000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTA............................................................2013.00330000000000000000
....................................................................................................CGGGTTTCGTTAGCAGCGGGG.............................................................................................................2113.00330000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAAA.......................................................2512.00220000000000000000
.....................................................................................................GGGTTTCGTTAGCAGCGGGCT............................................................................................................2112.00200200000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCACA........................................................2412.00220000000000000000
...................................................................................................TCGGGTTTCGTTAGCAGCGGGCC............................................................................................................2312.00220000000000000000
...................................................................................................TCGGGTTTCGTTAGCAGCGGGCT............................................................................................................2312.00220000000000000000
....................................................................................................CGGGTTTCGTTAGCAGCGGGGG............................................................................................................2212.00210100000000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCT..........................................................2112.00220000000000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCC..........................................................2112.00220000000000000000
....................................................................................................CGGGTTTCGTTAGCAGCGGGGC............................................................................................................2212.00220000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATC........................................................2411.00110000000000000000
dm3
CTCCTTGCA-CTGCAACT---------------------------------------------------------TAGG-AGAAACATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAAAT--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACGCTCAAGGCCGCCCAAGGAT-----TCACGTTTT---TSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCA..........................................................221126486.00126486000077021131477221461804000472390000600067710441104023111200010000000000001010007240000000000000000066342222194271192279080515687501393710114546640132442175295507728306763312962583218267671263101332121153661482109611448446829511392812751041378125000000020015130300100100000000000000061845405035351372857449711044268840201266683010000078901808000060600000000000000000132112130210370031138005965055430131064374115121671000282200120367280018343227100104302050200218415823541915181314216382000167022560003022100011200231146740601023400
......................................................................................................................................................TTCGTTGTCGACGAAACCTGC...........................................................211114701.0011470100005083010533270723020970000504147178296923781680000000101000000100000112000000000000000001010870701360111717127711877293458035111181754112109981621563585040101471315263522911534121131800209909692646938738577495900000000009135000100300000000000000036803390019532052873272482321081472145677968600000823154125000018019000000000000000003601400000000500110000132201242725651713142471873912125455109638140030183271085361061007254101001008011218925512198481543159365220020217112421602001247140011169068393161478121920014800
......................................................................................................................................................TTCGTTGTCGACGAAACCTG............................................................20124654.002465400005400000030014005600005000219359739196600000000000000000000001100000000000000000000002466200007421523113057214170148226530082686391142180565102716612310441364835160000000000000000000000000000000000001679175407105479111234010892622009308417600000239860100005000000000000000000000020000000000000000210161553000463151220000241000001110223100000000000010013013715435801331100005024000000000000000019600100000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA.........................................................2318318.008318000076101170132010022300000000000000000000000000000000000000000000000000000000021211251617710152873131328340892510253161265840094983755110612028131951501401412340714854800000000002000000000000000000000000051048202311010024471734210032612000002783000000000000000000000000000100000000005005915002001200100191022110000012001010100192500002110100000002912216703322000004041000000000002002006500000000100
....................................................................................................CGGGTTTCGTTAGCAGCGGGCT............................................................................................................2216481.006481000020010000000000000000010540000000000000000000000000003000000000000000000000001110340070125241500217125600001233032610223101111810300209140000000000120371000000005000000000000335102895202812175652995200000747060000109000000000000000001001000000015013000055540155740142840101010294201004501201549311001667170023006474202481082181802485012105022351530123135040333943665241477275103972913186432182641042041400
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATC........................................................2415384.005384000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033752008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCT.............................................................1913437.003437000000000000000000100000010018731603300000000000000000000000000000000000000000000007000000011037305341212201353100045144200030201422132101043698105000000000000000000000000000000000000383465022301146993518168114230000055000000000000000000000000000000000000000000000000002150000080000000400000000010100000000000000009413340010000000000000000000000000000800000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCC..........................................................2211906.001906000000000000001000000000000000000000000000000000000000000000000000000000000000006601020030013511512311200032100011310010001728016622908422020711225174000000000000000000000000000000000000182740531011002060700000013000000000000000000000000000000000000000000000001003360000432020000210000202006120000000000000000100111100000000101000000000000000000100000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT.........................................................2311898.0018980000250000001002000500000000000000000000000000000000000000110000000000000000010002000010020068701398640281556200013046016100001411060972503312813000000000010000000000000000000000000112105051002632430331331000009000000000000000000000000000000000000000100017100000011702102910907000011600001010080100000000000000011418143400011000003020000000100000000006500100000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGT...........................................................2111347.001347000016000000100010000000000000000000000000000000000000000000000000000000000000000390000000100540122110000820003110001000422150140641002511624000000000000000000000000000000000000384302400264415629206710000097300000000100000000000000000000000000000000000000001261000668080000011000011000311000020000000000048294791001000000030030000000000001010113100000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCT..........................................................2211044.0010440000300000000000012000000000000000000000000000000000000000000000000000000000120010031300067111930537110103200100227530101140156020516016123900000000000000000000000000000000000080720420011511921703300000070000000100000000000000000000000000000000000110001012200041300000000000020000601000000000000000012240200000000100000000000000000000700000000000
....................................................................................................CGGGTTTCGTTAGCAGCGGGC.............................................................................................................211823.008230000000000000003000000000003100000000000000000000000000000000000000000000000000000000001000000000000000000000000000011000010000000000000000010800000000000000000000006202450153115000000002020000002000000000000001000000000000000071000024035710012501002044110167010064250001000000000220311417323901310000012023100003515180411703860212210021361200
......................................................................................................................................................TTCGTTGTCGACGAAACCTGA...........................................................211692.00692000025000110200000010000000000000000000000000000000000000000000000000000000000000200000010003031301001054000220300000021521061017102509061000000000000000000000000000000000000021230120011260151440700000006100000000000000000000000000000000000000000000100000113000031803000009000000000000000000001000000016623160000000000200000000000000000000500000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCA..........................................................211633.006330000400000010000000000000000000000000000000000000000000000000000000000000000000011000100730219085603002216100022710051200087010125012091400000000000000000000000000000000000043250150027270370801200000042000000000000000000000000000000000000000000000000000300001300000001000010000000000000000000000002220001000000100000000000000000000300000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCG..........................................................221436.00436000010101010400200030000000000000000000000000000000000000000000000000000000000001161012002001300119031125850002610071110184010111040710000000000000000000000000000000000003030016005110801003410000023000000000000000000000000000000000000000000000000000200003302000001000000000003000000000000000025140000000000000000000000000000000100000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGC...........................................................201362.0036200002000000000000000000000001000000000000000000000000000000000000000000000000000200000030003002300001042000000100000323220707515070640000000000000000000000000000000000001631070019230221807000000220000000000000000000000000000000000000000000000000009000021101000003000000000000000000000000000042640000000000000000000000000000000500000000000
....................................................................................................CGGGTTTCGTTAGCAGCGGG..............................................................................................................201287.00287000000000000000000000000010000010110000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000140110012000701000000000000010000000000000000000000000000000110000000000010001601000000000019000030210000000000000000342121000160000010000000003300253171112811201010000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC.........................................................231276.002760000200000010000001000000000000000000000000000000000000000000000000000000000000080000002000903150100019000001001600000204000105050613000000000000000000000000000000000000191501000250203060000006000000000000000000000000000000000000000000022000000000000300000000000001000001000000000000000010020000000000100000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACC..............................................................181239.00239000000000000000000000000000031220300000000000000000000000100000000000000000000002000000000060029000000471000500000000030000000039820000000000000000000000000000000000001140210622231815160000036000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTT............................................................201229.0022900000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000310000000324128210000000000000000000000000000000000001080500000101010000003000000000000000000000000000000000000000000000000000100000200000000000000000000000000000000000000060000000000000000000000000000000000000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAA.........................................................221202.002020000200000000000000000000000000000000000000000000000000000000000000000000000000030000004003110142211207300001804040130010000000020100000000000000000000000000000000000001060500530704010000007100000000000000000000000000000000000000000000000000000000301000011000000000100000000000000000001100000000100000000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGG...........................................................211195.00195000030000000001000000000000000000000000000000000000000000000000000000000000000001200000000007003000000700000000100000280100123000230000000000000000000000000000000000001260600750201902930000017000000000000000000000000000000000000000000000000000400002700000003000000000000000000000000000012220000000000000000000000000010000000000000000
.........................................................................................................................................................GTTGTCGACGAAACCTGC...........................................................181169.0016900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000321060245010310000000000000000000000000000000000008130500970400010000003100100000000000000000000000000000000000000000000100050000040000000100000000000000000000000000000441100000000000000000000000000000100400000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA........................................................241163.0016300001000000000000010000000000000000000000000000000000000000000000000000000000000200000000003011500010039100080102000002000000000040000000000000000000000000000000000000121305001408080120000005000000000000000000000000000000000000000000011000000000003101000002000000000000000000000000000010100100000000100000000000000000000100000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCCA.........................................................231140.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000400000020006011300000020000000000000122001000002322370000000000000000000000000000000000001570400000000000000000000000000000000000000000000000000000000000000000000200000500000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TCGGGTTTCGTTAGCAGCGGGC.............................................................................................................221137.00137000000000000000100000000000014011000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000121016011110000000000000000000000000000000000000000000000001000000000030000020000001000000110000000000000000000001174401100000002010000000100000302025400010000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG.........................................................231113.0011300003000010000000000000000000000000000000000000000000000000000000000000000000000100000020101009010000240000110302010000300000002001000000000000000000000000000000000000690300200014080000002000000000100000000000000000000000000000000101000000000001101000000000000000200000000000000000000100000000000000000000000000000000300000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGTT..........................................................221106.0010600000000000000000000000000000000000000000000000000000000000000000000000000000000240000000000600000000005000010000000000000000001021000000000000000000000000000000000000030100020300020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGATC.........................................................231106.0010600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004660000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTG............................................................19198.009800000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000002000000120000000000000010000000031300000000000000000000000000000000000001570100411214040200000013000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................GTTGTCGACGAAACCTGCA..........................................................19187.008700000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000500001010100100000000000000000000000000000000000058061071307000000000013000000000000000000000000000000000000000000000000100001000000000000000000000200000130000000000002140100000000000000000000000000000000000000000
....................................................................................................CGGGTTTCGTTAGCAGCG................................................................................................................18179.007900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000100000000000000000000000000000000000000000000000000001000000010000000100000000000000000000000000000000000000000000000000000000000000000000007000024010000000000000000221100204000000000000000020000000012200000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTC............................................................20168.00680000100000000000000000000000000000000000000000000000000000000000000000000000000030000000000100100000000000000000000020000000021530000000000000000000000000000000000006803005302010420000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTA............................................................20161.0061000030000000000000000000000000000000000000000000000000000000000000000000000000004000000000030000000005000000000000002010000000011000000000000000000000000000000000000540400040325030000008000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001010000000000000000000000000000000000000000000
.....................................................................................................GGGTTTCGTTAGCAGCGGGCT............................................................................................................21158.00580000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000302001010000000000010000000000000000000000000000000000000000000000000000000000000000000000101001000000100000000000432125000000002021000100000001403001200000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCTA.........................................................23152.00520000000000000000000000000000000000000000000000000000000000000000000000000000000040000000100100130000019000110001000001000000101010000000000000000000000000000000000000360500000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAT........................................................24152.0052000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000030000001300002000000000110000000000100000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000001213000000000001100000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................CGTTGTCGACGAAACCTGCA..........................................................20148.0048000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000020013204000000000000000000000000000000000000000000000000000000000000000320200330500010000006000000000000000000000000000000000000000000000002000000000000000000000000000011000030000000000000210000000000000000000000000000000000000000000
droEug1
ATCTATGT------------------------CAAGTGATTAATTTTA--AG---------GAC----AACTATAAAGCT-CCTCGATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTCTTTACTTT--------TCAACTAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACG--------------------------------CTTAASizeHit CountTotal NormTotal
No Reads
droBia1
CTCCTCAAA---------------A----------GTGAT----TTTAAAATTATAAAACGGA---------------A-ATAAAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTACACTCTTT--------TCAACGAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACG--------------------------------CT---SizeHit CountTotal NormTotal
No Reads
droTak1
TT--------------------------------------------TAAAATA---------ATA-CCT------AAGA-ACAAAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTACGTACTTT--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAATCAACG--------------------------------CT---SizeHit CountTotal NormTotal
No Reads
droEle1
TTTAATGTA--------TTCAGGAA----------GTGAT----TTTGATAT---------GATA-CT-------AATC-AAAGAAGTCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTATAACC-GT--------TTGACAAGTTCGTTGTCGACGAAACCTGCATACTGTGT-GGAAAGTCAACA--------------------------------TTAAASizeHit CountTotal NormTotal
No Reads
droRho1
AACATTCGA-A----------AACAGTGGTGTCATGTG--------TAATAA---------GAC----AACT---AATCTACCAAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTACAAC-AAT--------TGGACAAGTTCGTTGTCGACGAAACCTGCATACTGTGT-GGAAAATCAACAA---------CCCATCGAT-----ATA--TTCT---TSizeHit CountTotal NormTotal
No Reads
droFic1
AAAC---------------------------------------------------------------A-------AAGTTACAAAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTTTATTGTTA--------TTAGCAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAACTCAACATTACAAGCAGCCG----TTACGATCT----------ASizeHit CountTotal NormTotal
No Reads
droKik1
A---------------------------------------------------------------------------------GAAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGTCTATAAT------T--------TTAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAAAAACAACG--------------------------------TTCAASizeHit CountTotal NormTotal
No Reads
droAna3
---------------------------------------------------------------------------------------TCCTCACTGAAGCCGGGTTTCGTTAACAGCGGGCTGTCATTTCGAAA--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAATAACAACG--------------------------------TTTAASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
......................................................................................................................................................TTCGTTGTCGACGAAACCTGC...........................................................21120626.0020626831139539455018608
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCA..........................................................2212509.002509120527193614659
......................................................................................................................................................TTCGTTGTCGACGAAACCTG............................................................201964.00964451201782331
....................................................................................................CGGGTTTCGTTAACAGCGGGCT............................................................................................................221670.0067012312292603
......................................................................................................................................................TTCGTTGTCGACGAAACCTGT...........................................................211318.003185001146193
......................................................................................................................................................TTCGTTGTCGACGAAACCTGA...........................................................211224.0022400070217
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA.........................................................231162.001623039120072
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCA..........................................................211131.0013113100000
......................................................................................................................................................TTCGTTGTCGACGAAACCT.............................................................191130.00130292075024
.......................................................................................................................................................TCGTTGTCGACGAAACCTGC...........................................................201108.0010895000013
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT.........................................................23164.0064112021426
....................................................................................................CGGGTTTCGTTAACAGCGGGC.............................................................................................................21160.00601304052
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCT..........................................................22137.00377118020
.......................................................................................................................................................TCGTTGTCGACGAAACCTG............................................................19131.00313100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCC..........................................................22121.0021510708
.........................................................................................................................................................GTTGTCGACGAAACCTGC...........................................................18117.00171000016
.....................................................................................................GGGTTTCGTTAACAGCGGGCT............................................................................................................21115.00150020013
......................................................................................................................................................TTCGTTGTCGACGAAACCTT............................................................20114.0014300407
......................................................................................................................................................TTCGTTGTCGACGAAACCTGG...........................................................21114.00141001012
........................................................................................................................................................CGTTGTCGACGAAACCTGCA..........................................................20111.00111100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCG..........................................................22110.0010500401
......................................................................................................................................................TTCGTTGTCGACGAAACC..............................................................18110.0010090001
......................................................................................................................................................TTCGTTGTCGACGAAACCTC............................................................2019.009000009
....................................................................................................CGGGTTTCGTTAACAGCGGGCC............................................................................................................2219.009080001
........................................................................................................................................................CGTTGTCGACGAAACCTGC...........................................................1919.009600003
....................................................................................................CGGGTTTCGTTAACAGCGGG..............................................................................................................2018.008000008
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG.........................................................2316.006100203
....................................................................................................CGGGTTTCGTTAACAGCG................................................................................................................1814.004000103
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC.........................................................2314.004040000
........................................................................................................................................................CGTTGTCGACGAAACCTG............................................................1814.004400000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA........................................................2414.004130000
.......................................................................................................................................................TCGTTGTCGACGAAACCT.............................................................1813.003300000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGTT..........................................................2213.003000201
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAA.........................................................2213.003300000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGT...........................................................2012.002100100
......................................................................................................................................................TTCGTTGTCGACGAAACCTTA...........................................................2112.002000002
......................................................................................................................................................TTCGTTGTCGACGAAAC...............................................................1712.002000200
......................................................................................................................................................TTCGTTGTCGACGAAACCC.............................................................1912.002000002
.....................................................................................................................................................GTTCGTTGTCGACGAAACCTGCA..........................................................2312.002200000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAT........................................................2412.002100001
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATTAG......................................................2612.002000002
....................................................................................................CGGGTTTCGTTAACAGCGGT..............................................................................................................2011.001000010
......................................................................................................................................................TTCGTTGTCGACGAAACCTGGT..........................................................2211.001000001
....................................................................................................CGGGTTTCGTTAACAGCGGGA.............................................................................................................2111.001000001
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT........................................................2411.001000100
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAT.........................................................2211.001000100
.................................................................................................................................................ACAAGTTCGTTGTCGACGAAACCTGC...........................................................2611.001000001
droBip1
T-----------------------------------------------------------------------------G-TGAATTATCCTCACTGAAGCCGGGTTTCGTTAACAGCGGACTGTCATTTCGAAA--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAATGACAACG--------------------------------TTTAASizeHit CountTotal NormTotal
No Reads
dp5
TG------------------------------------------------------------------------------CGAAAAATCCACATTGAAATCGGGTTTCGTTAACAGCGGGCTGTTATGAATAAA--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAGAAACAAC--------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
......................................................................................................................................................TTCGTTGTCGACGAAACCTGC...........................................................21111733.001173321527144774616518701100268
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCA..........................................................2219261.009261220469095098194789301219
......................................................................................................................................................TTCGTTGTCGACGAAACCTG............................................................2012235.00223551263672802290004
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA.........................................................231430.004301863722856100012
......................................................................................................................................................TTCGTTGTCGACGAAACCT.............................................................191407.0040726823110240000
....................................................................................................CGGGTTTCGTTAACAGCGGGCT............................................................................................................221291.00291125919148584000
......................................................................................................................................................TTCGTTGTCGACGAAACC..............................................................181285.00285019275000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCA..........................................................211185.00185017608010000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGT...........................................................211157.0015701502801131000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT.........................................................231154.0015401801091240002
.......................................................................................................................................................TCGTTGTCGACGAAACCTGC...........................................................201143.00143013802030000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCT..........................................................221140.0014001241004180002
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCC..........................................................221129.00129043994190000
.......................................................................................................................................................TCGTTGTCGACGAAACCTG............................................................191125.00125012401000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC.........................................................231112.0011207794040000
......................................................................................................................................................TTCGTTGTCGACGAAACCC.............................................................19146.004600046000000
....................................................................................................CGGGTTTCGTTAACAGCGGGC.............................................................................................................21127.002700231370002
....................................................................................................CGGGTTTCGTTAACAGCGGGCC............................................................................................................22123.002300167000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGA...........................................................21118.001804040100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG.........................................................23118.00180223030008
......................................................................................................................................................TTCGTTGTCGACGAAACCTT............................................................20115.001501002030000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGG...........................................................21113.001301010200000
....................................................................................................CGGGTTTCGTTAACAGCGGG..............................................................................................................20112.00120002190000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAA.........................................................22112.001201001010000
........................................................................................................................................................CGTTGTCGACGAAACCTGCA..........................................................20110.00100900010000
........................................................................................................................................................CGTTGTCGACGAAACCTGC...........................................................19110.00100603000001
.......................................................................................................................................................TCGTTGTCGACGAAACCT.............................................................1818.0080800000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT........................................................2417.0070114000001
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCG..........................................................2217.0070401020000
.........................................................................................................................................................GTTGTCGACGAAACCTGC...........................................................1817.0070201220000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGTT..........................................................2216.0060201030000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA........................................................2415.0050013010000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCCA.........................................................2315.0050103010000
.........................................................................................................................................................GTTGTCGACGAAACCTGCA..........................................................1915.0050001100003
.......................................................................................................................................................TCGTTGTCGACGAAACCTGT...........................................................2013.0030300000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTA............................................................2013.0030100020000
........................................................................................................................................................CGTTGTCGACGAAACCTG............................................................1812.0020200000000
.....................................................................................................GGGTTTCGTTAACAGCGGGCT............................................................................................................2112.0020000110000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCCC.........................................................2312.0020101000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGAC..........................................................2212.0020011000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCC..........................................................2112.0020200000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAC.........................................................2212.0020200000000
....................................................................................................CGGGTTTCGTTAACAGCGG...............................................................................................................1912.0020000011000
......................................................................................................................................................TTCGTTGTCGACGAAACCTC............................................................2011.0010001000000
droPer2
TG------------------------------------------------------------------------------CGAAAAATCCACATTGAAATCGGGTTTCGTTAACAGCGGGCTGTTATGAATAAA--------TCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGT-GGAGAAACAAC--------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
......................................................................................................................................................TTCGTTGTCGACGAAACCTGC...........................................................2113596.0035962637411113461630109
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCA..........................................................2211470.001470126287505164883
......................................................................................................................................................TTCGTTGTCGACGAAACCTG............................................................201616.006162426011341970
....................................................................................................CGGGTTTCGTTAACAGCGGGCT............................................................................................................221342.0034214112475983
......................................................................................................................................................TTCGTTGTCGACGAAACCTGT...........................................................211202.00202090351517
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA.........................................................231114.001142515030440
......................................................................................................................................................TTCGTTGTCGACGAAACCT.............................................................19147.004712209150
....................................................................................................CGGGTTTCGTTAACAGCGGGC.............................................................................................................21144.004418027170
.......................................................................................................................................................TCGTTGTCGACGAAACCTGC...........................................................20144.00440410210
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT.........................................................23137.003715115141
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCA..........................................................21130.00300270030
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCC..........................................................22130.00301300980
.......................................................................................................................................................TCGTTGTCGACGAAACCTG............................................................19125.00251230100
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCT..........................................................22124.00241141350
....................................................................................................CGGGTTTCGTTAACAGCGGG..............................................................................................................20120.00200006113
......................................................................................................................................................TTCGTTGTCGACGAAACCTGA...........................................................21119.00190107101
....................................................................................................CGGGTTTCGTTAACAGCGGGCC............................................................................................................22111.0011900101
.........................................................................................................................................................GTTGTCGACGAAACCTGCA..........................................................1919.009210222
........................................................................................................................................................CGTTGTCGACGAAACCTGC...........................................................1918.008020600
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC.........................................................2317.007120220
......................................................................................................................................................TTCGTTGTCGACGAAACCTGG...........................................................2117.007230110
....................................................................................................CGGGTTTCGTTAACAGCGGGCG............................................................................................................2216.006600000
.........................................................................................................................................................GTTGTCGACGAAACCTGC...........................................................1815.005001220
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCG..........................................................2215.005200120
......................................................................................................................................................TTCGTTGTCGACGAAACCTCT...........................................................2114.004000220
....................................................................................................CGGGTTTCGTTAACAGCGG...............................................................................................................1913.003000030
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAA.........................................................2213.003020100
.....................................................................................................GGGTTTCGTTAACAGCGGGCT............................................................................................................2113.003001020
......................................................................................................................................................TTCGTTGTCGACGAAACCTTT...........................................................2112.002010010
....................................................................................................CGGGTTTCGTTAACAGCG................................................................................................................1812.002000020
....................................................................................................CGGGTTTCGTTAACAGCGGGT.............................................................................................................2112.002000110
......................................................................................................................................................TTCGTTGTCGACGAAACC..............................................................1812.002200000
........................................................................................................................................................CGTTGTCGACGAAACCTGCA..........................................................2012.002010010
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA........................................................2412.002000110
......................................................................................................................................................TTCGTTGTCGACGAAACCTGTT..........................................................2212.002000110
...................................................................................................TCGGGTTTCGTTAACAGCGGGC.............................................................................................................2212.002000110
.......................................................................................................................................................TCGTTGTCGACGAAACCT.............................................................1812.002020000
......................................................................................................................................................TTCGTTGTCGACGAAACCTT............................................................2012.002000200
....................................................................................................CGGGTTTCGTTAACAGCGGT..............................................................................................................2012.002000020
......................................................................................................................................................TTCGTTGTCGACGAAACCTGTC..........................................................2211.001000100
......................................................................................................................................................TTCGTTGTCGACGAAACCTGGC..........................................................2211.001010000
......................................................................................................................................................TTCGTTGTCGACGAAACCTCA...........................................................2111.001010000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGTTC.........................................................2311.001000010
..........................................................................................................................GTTATGAATAAA--------TCAACAAG................................................................................2011.001000010
......................................................................................................................................................TTCGTTGTCGACGAAACCTC............................................................2011.001000010
droWil2
--------------------------------------------------------------------------------------ATCCACACTGAAATCGGGTTTCGCTAGCAGCGGACTGTCATGATAAATGTGAAAAACAAACAAGTTCGTTGTCGACGAAACCTGCATCATGTGTCGGACAAACAGCT--------------------------------CT---SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
......................................................................................................................................................TTCGTTGTCGACGAAACCTGC...........................................................21118076.001807644012001826113196
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCA..........................................................2219560.0095606753685106281484
......................................................................................................................................................TTCGTTGTCGACGAAACCTG............................................................2015515.00551552657205173
....................................................................................................CGGGTTTCGCTAGCAGCGGACT............................................................................................................2212100.00210055320604941
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA.........................................................231784.007846443201989
......................................................................................................................................................TTCGTTGTCGACGAAACCT.............................................................191432.00432402100020
......................................................................................................................................................TTCGTTGTCGACGAAACC..............................................................181326.003263250001
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCG..........................................................221196.001961881124
....................................................................................................CGGGTTTCGCTAGCAGCGGAC.............................................................................................................211170.0017014700815
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC.........................................................231122.001221211000
...................................................................................................TCGGGTTTCGCTAGCAGCGGACT............................................................................................................231109.001093301867
......................................................................................................................................................TTCGTTGTCGACGAAACCTGA...........................................................21182.00821020070
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCT..........................................................22178.0078740004
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT.........................................................23175.00752650440
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCA..........................................................21168.0068658004
...................................................................................................TCGGGTTTCGCTAGCAGCGGAC.............................................................................................................22166.00664500021
......................................................................................................................................................TTCGTTGTCGACGAAACCTGT...........................................................21157.00571500141
......................................................................................................................................................TTCGTTGTCGACGAAACCTGG...........................................................21151.0051490002
....................................................................................................CGGGTTTCGCTAGCAGCGGACC............................................................................................................22147.0047440012
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCC..........................................................22142.0042331008
.......................................................................................................................................................TCGTTGTCGACGAAACCTGC...........................................................20135.00352170016
.........................................................................................................................................................GTTGTCGACGAAACCTGCA..........................................................19125.0025500020
.........................................................................................................................................................GTTGTCGACGAAACCTGC...........................................................18123.0023300119
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG.........................................................23121.0021180003
.....................................................................................................GGGTTTCGCTAGCAGCGGACT............................................................................................................21120.0020000515
........................................................................................................................................................CGTTGTCGACGAAACCTGC...........................................................19118.0018400014
..........................................................................................................................................................TTGTCGACGAAACCTGCA..........................................................18114.0014130001
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA........................................................24114.0014130001
...................................................................................................TCGGGTTTCGCTAGCAGCGGA..............................................................................................................21113.0013000013
....................................................................................................CGGGTTTCGCTAGCAGCGGACG............................................................................................................22112.0012120000
..........................................................................................................................................................TTGTCGACGAAACCTGCAA.........................................................1918.00880000
........................................................................................................................................................CGTTGTCGACGAAACCTGCA..........................................................2018.00831004
......................................................................................................................................................TTCGTTGTCGACGAAACCTC............................................................2017.00701015
.........................................................................................................................................................GTTGTCGACGAAACCTGCAA.........................................................2016.00640002
..........................................................................................................................GTCATGATAAATGTGAAAAACA......................................................................................2216.00620004
......................................................................................................................................................TTCGTTGTCGACGAAACCC.............................................................1925.5011110000
.......................................................................................................................................................TCGTTGTCGACGAAACCTG............................................................1915.00503002
......................................................................................................................................................TTCGTTGTCGACGAAACCG.............................................................1914.00440000
.....................................................................................................................................................GTTCGTTGTCGACGAAACCTGCC..........................................................2314.00440000
....................................................................................................CGGGTTTCGCTAGCAGCGGA..............................................................................................................2014.00400004
.....................................................................................................................................................GTTCGTTGTCGACGAAACCTGC...........................................................2213.00300030
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCACT........................................................2413.00330000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAA.........................................................2213.00320001
.....................................................................................................................................................GTTCGTTGTCGACGAAACCTGCT..........................................................2313.00330000
...................................................................................................TCGGGTTTCGCTAGCAGCGG...............................................................................................................2013.00310002
...................................................................................................TCGGGTTTCGCTAGCAGCGGACC............................................................................................................2312.00220000
....................................................................................................CGGGTTTCGCTAGCAGCGGAA.............................................................................................................2112.00200002
........................................................................................................TTTCGCTAGCAGCGGACT............................................................................................................1812.00220000
..........................................................................................................................................................TTGTCGACGAAACCTGCAT.........................................................1912.00220000
...................................................................................................TCGGGTTTCGCTAGCAGCGGAT.............................................................................................................2212.00200002
......................................................................................................................................................TTCGTTGTCGACGAAACCTCA...........................................................2112.00201010
........................................................................................................TTTCGCTAGCAGCGGACC............................................................................................................1811.00110000
..........................................................................................................................................................TTGTCGACGAAACCTGCGA.........................................................1911.00110000
..........................................................................................................................GTCATGATAAATGTGAAA..........................................................................................1811.00110000
droVir3
--------------------------------------------------------------------------------------ATCTACATTGAACTCAGATTTCGTCAGCAGCGGGCTGTGATGATT--A--------TGAACAAGTTCGTTGTCGACGAAACCTGCATACTGTGT-GGAGTGGCAAC--------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCA..........................................................22110262.00102622510156324420310801000001154741281577543286308299390470143840321853202770010250010000000000102122201875870001833910331281016920221610
......................................................................................................................................................TTCGTTGTCGACGAAACCTGC...........................................................2117933.0079331510733331290290467350001738527272613427231128078670020099111481441189000014000001000000100011002012349000510429000010936
......................................................................................................................................................TTCGTTGTCGACGAAACCTG............................................................2013543.003543301553169105000000001651687317513710843073450100026728411860100600000000000000000000125000000132100010000
....................................................................................................CAGATTTCGTCAGCAGCGGGCT............................................................................................................2212349.002349591635111602314090000191013211743161400000111141902300000130110100006265127421380491401900001505124211401
....................................................................................................CAGATTTCGTCAGCAGCGGGC.............................................................................................................211974.0097423806820100010000421200121100000321401400000200000000000010310752521100000002000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCT.............................................................191381.003812237421000000000078913510182000000110002000000000000000000000006004000000003000000010
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA.........................................................231357.0035705113600000000002520612540192112101452811241030000000000000000000001190000201763520303761712
....................................................................................................CAGATTTCGTCAGCAGCGGGCC............................................................................................................221266.002661124905000000000000000000000000000000000000000000000000000000010000000000000000000
.......................................................................................TCTACATTGAACTCAGATTTCGTCAGC....................................................................................................................271198.0019800000000100000000000000003300017000014700000000000000000000000000000000000000000000
.......................................................................................TCTACATTGAACTCAGATTTCGTCAGCA...................................................................................................................281163.0016300000000000000000000000002000010000013300000000000000000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCC..........................................................221162.00162091501000000003283611111456000002004010000040000000000000000000010100010000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGGCTT...........................................................................................................231146.00146196300000010000010111027000003401020000040000000000000000000012600000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCT..........................................................221124.00124177510000000000150212013001002001000000000000000000000000020013000001000201000011
....................................................................................................CAGATTTCGTCAGCAGCG................................................................................................................181111.0011129900000000000000000010000000000202000000000000000000000000005000000000000000000
.................................................................................................................................TT--A--------TGAACAAGTTCGTTGTCGACGA..................................................................251110.001100000000050000000000000000120001500007800000000000000000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACC..............................................................181106.0010619105000000000010100001000000000000000000000000000000001111100000000000100000000
....................................................................................................CAGATTTCGTCAGCAGCGGG..............................................................................................................20196.00961124004000000001011113200000079160131000030000000000000000000020500000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGT...........................................................21186.008605200300000000690363049000002100020000010000000000000000000030000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGG...............................................................................................................19178.007833610040000000000000060000000120108000005000000000000000000009200000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT.........................................................23176.0076385000000000006232231220000021121000000000000000000000000020016100000000000001100
....................................................................................................CAGATTTCGTCAGCAGCGGGCG............................................................................................................22172.007246400000000000000000000000000000000000000000000000000000000301000000000000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCA..........................................................21166.006601600000000000012000000100000000100000000000000000000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCG..........................................................22157.005724610000000000000001000000000010000000000000000000000000000006000000000000000000
.................................................................................................................................TT--A--------TGAACAAGTTCGTTGTCGACGAA.................................................................26153.0053000000002000000000000000013000700003100000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGT..............................................................................................................20145.0045012000204000000000000200000000002010000000000000000000000000014800000000000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGC...........................................................20144.004400380000000000000100000200000000000000000000000000000000000003000000000000000000
.................................................................................................................................TT--A--------TGAACAAGTTCGTTGTCGACGAAA................................................................27144.004400000000000000000000000006000200003600000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGT...............................................................................................................19137.0037022100000000000100000010000001000000000010000000000000000000010000000000000000000
.......................................................................................TCTACATTGAACTCAGATTTCGTCA......................................................................................................................25136.003600000000000000000000000006000600002400000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGTT..............................................................................................................20133.0033016000100000000001001210000000000000000000000000000000000000011000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGG...........................................................21129.002902610000000000001000000000000000000000000000000000000000000001000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGGCTC...........................................................................................................23126.00269200010000000000000010000000100202000002000000000000000000300200000010000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC.........................................................23125.002511022000000000012000001000000010000000000000000000000000000001000010000000001002
....................................................................................................CAGATTTCGTCAGCAGCGGGT.............................................................................................................21121.00210520000104000001001000100000010100000000000000000000000000004000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGA...........................................................21121.00210310000000000011104102000000000000000000000000000000000000007000000000000000000
.........................................................................................................................................................GTTGTCGACGAAACCTGC...........................................................18120.00200100000000000013112102200000000100000000000000000000000001004000000000000000000
.....................................................................................................AGATTTCGTCAGCAGCGGGCT............................................................................................................21119.001901400000000000010000000000000000101000000000000000000000000002000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGGCTTA..........................................................................................................24116.001601600000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTT............................................................20114.00140140000000000000001102100000000000000000000000000000000001003000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGTT.............................................................................................................21113.00130300000001000000000000000000100001000000000000000000000000007000000000000000000
.........................................................................................................................................................GTTGTCGACGAAACCTGCA..........................................................19112.00120000000000000010011001200000001100000001000000000000000000003000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGTA..............................................................................................................20110.00100500000000000000100000000000000000000000000000000000000000004000000000000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTG............................................................19110.00100090000000000000000000000000000000000000000000000000000000001000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCC.............................................................1919.0090900000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TT--A--------TGAACAAGTTCGTTGTCGACG...................................................................2419.0090000000000000000000000000200010000600000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGGCTTC..........................................................................................................2418.0080700000000000000000000000000000000000000000000000000000000001000000000000000000
..........................................................................................................................................................TTGTCGACGAAACCTGCA..........................................................1818.0080500000000000000000000000000001100000000000000000000000000001000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGGCTA...........................................................................................................2318.0080600000000000010000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG.........................................................2317.0070310000000000000100000000000000100000000000000000000000000001000000000000000000
........................................................................................................................................................CGTTGTCGACGAAACCTGCA..........................................................2017.0071030000000000000000000000000110000000000000000000000000000001000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCT................................................................................................................1817.0070700000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TCTACATTGAACTCAGATTTCGTCAG.....................................................................................................................2616.0060000000010000000000000000000020000300000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGTTT.............................................................................................................2136.001805000000000000000000000000000000000000000000000000000000000011200000000000000000
..............................................................................................................................................TGAACAAGTTCGTTGTCGACGAAACC..............................................................2616.0060000000000000000000000000000000000600000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGGCTGT..........................................................................................................2416.0060600000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TT--A--------TGAACAAGTTCGTTGTCGACGAAAC...............................................................2815.0050000000000000000000000000000000000500000000000000000000000000000000000000000000
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAA.........................................................2215.0050300000000000010000000000000000000000000000000000000000000000000000001000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTC............................................................2015.0050000000000000000000000100000000000000000000000000000000000004000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGC..............................................................................................................2015.0050300000000000000000000000000000000000000000000000000000000002000000000000000000
.................................................................................................................................TT--A--------TGAACAAGTTCGTTGTCGACGAAACC..............................................................2915.0050000000000000000000000000400000000100000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGGA.............................................................................................................2114.0040200000000000000000100000000000000000000000000000000000000001000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGGG.............................................................................................................2114.0040400000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGA...............................................................................................................1914.0040100000000000000000000000000000000000000000000000000000000003000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAAC...............................................................1714.0040000000000000000000000000000000000000000000000000000000000004000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT........................................................2414.0040101000000000000000000000000000000000000000000000000000000001000000000100000000
.................................................................................................................................TT--A--------TGAACAAGTTCGTTGTCGA.....................................................................2213.0030000000000000000000000000000000000300000000000000000000000000000000000000000000
...................................................................................................TCAGATTTCGTCAGCAGCGGGC.............................................................................................................2213.0030200000000000000000010000000000000000000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGTG.............................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000003000000000000000000
........................................................................................................................................................CGTTGTCGACGAAACCTG............................................................1813.0030020000000000000000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCCC.........................................................2313.0031000000000000000000000000000110000000000000000000000000000000000000000000000000
.....................................................................................................AGATTTCGTCAGCAGCGGGCTT...........................................................................................................2213.0030100000000000000000000000000000000000000000000000000000000001100000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTA............................................................2013.0030110000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................TT--A--------TGAACAAGTTCGTTGTCGAC....................................................................2313.0030000000000000000000000000100000000200000000000000000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCCA.........................................................2313.0030000000000000010001000000000000000100000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGGAC............................................................................................................2212.0020100000000000000000010000000000000000000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGA..............................................................................................................2012.0020100000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................................................................CATTGAACTCAGATTTCGTCAGCAGC.................................................................................................................2612.0020000000000000000000000000000000000200000000000000000000000000000000000000000000
..........................................................................................................................GTGATGATT--A--------TGAACAAG................................................................................1812.0020000000000000001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................TCTACATTGAACTCAGATTTCGTC.......................................................................................................................2412.0020000000000000000000000000100000000100000000000000000000000000000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCTA.........................................................2312.0020000000020000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGGCTAA..........................................................................................................2412.0020200000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGTA.............................................................................................................2112.0020200000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGGCA............................................................................................................2212.0020100000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................ATTTCGTCAGCAGCGGGCT............................................................................................................1912.0020010000000000000000000100000000000000000000000000000000000000000000000000000000
...................................................................................................TCAGATTTCGTCAGCAGCGGGCT............................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000002000000000000000000
......................................................................................................................................................TTCGTTGTCGACGAAACCGC............................................................2012.0020000000000000000000000000000000000000000000000000000000000002000000000000000000
.........................................................................................................................................................GTTGTCGACGAAACCTGCT..........................................................1912.0020000000000000010000000000000010000000000000000000000000000000000000000000000000
....................................................................................................CAGATTTCGTCAGCAGCGGGCTG...........................................................................................................2312.0020110000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
--------------------------------------------------------------------------------------ATCTACATTGAACTCAGGTTTCGTTAGCAACGGGCTGTGATGATTAAA--------AGAACAAGTTCGTTGTCGACGAAACCTGCATGCTATGT-GGAGAGGCAAC--------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
......................................................................................................................................................TTCGTTGTCGACGAAACCTGC...........................................................2112880.00288043717986126316116
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCA..........................................................2212537.002537839273316007337
....................................................................................................CAGGTTTCGTTAGCAACGGGCT............................................................................................................221334.0033442934562083
......................................................................................................................................................TTCGTTGTCGACGAAACCTG............................................................201322.003221410809830
......................................................................................................................................................TTCGTTGTCGACGAAACCTGT...........................................................211159.0015940698501
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCA..........................................................21186.00867801340
....................................................................................................CAGGTTTCGTTAGCAACGGGC.............................................................................................................21182.00822300770
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA.........................................................23163.00632501116110
....................................................................................................CAGGTTTCGTTAGCAACGGGCC............................................................................................................22153.00530000530
.......................................................................................................................................................TCGTTGTCGACGAAACCTGC...........................................................20149.00494701100
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT.........................................................23148.0048190111521
......................................................................................................................................................TTCGTTGTCGACGAAACCT.............................................................19143.0043200111110
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCC..........................................................22137.00371020790
......................................................................................................................................................TTCGTTGTCGACGAAACCTGA...........................................................21121.00210021900
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCT..........................................................22117.0017402470
.......................................................................................................................................................TCGTTGTCGACGAAACCTG............................................................19113.00131300000
.....................................................................................................AGGTTTCGTTAGCAACGGGCT............................................................................................................21111.0011111440
......................................................................................................................................................TTCGTTGTCGACGAAACC..............................................................18110.0010100090
.........................................................................................................................................................GTTGTCGACGAAACCTGC...........................................................1817.007101500
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAA.........................................................2217.007201400
....................................................................................................CAGGTTTCGTTAGCAACGGGCTT...........................................................................................................2316.006001140
........................................................................................................................................................CGTTGTCGACGAAACCTGC...........................................................1915.005301100
........................................................................................................................................................CGTTGTCGACGAAACCTGCA..........................................................2015.005500000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC.........................................................2315.005100130
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCG..........................................................2215.005001400
......................................................................................................................................................TTCGTTGTCGACGAAAC...............................................................1713.003000300
....................................................................................................CAGGTTTCGTTAGCAACGGG..............................................................................................................2013.003001200
......................................................................................................................................................TTCGTTGTCGACGAAACCTT............................................................2012.002001100
.....................................................................................................AGGTTTCGTTAGCAACGGGC.............................................................................................................2012.002000110
......................................................................................................................................................TTCGTTGTCGACGAAACCTGG...........................................................2112.002101000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT........................................................2412.002101000
.........................................................................................................................................................GTTGTCGACGAAACCTGCA..........................................................1912.002002000
....................................................................................................CAGGTTTCGTTAGCAACGGGCTC...........................................................................................................2312.002000020
..........................................................................................................................................................TTGTCGACGAAACCTGCA..........................................................1812.002001100
......................................................................................................................................................TTCGTTGTCGACGAAACCTGAC..........................................................2211.001000010
........................................................................................................................................................CGTTGTCGACGAAACCTGCAA.........................................................2111.001100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCTGA........................................................2411.001000100
.....................................................................................................................................................GTTCGTTGTCGACGAAACCTG............................................................2111.001100000
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCATCT.......................................................2511.001000100
.....................................................................................................................................................GTTCGTTGTCGACGAAACCTGCA..........................................................2311.001100000
....................................................................................................CAGGTTTCGTTAGCAACGGGT.............................................................................................................2111.001000100
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCACC........................................................2311.001100000
.......................................................................................................GTTTCGTTAGCAACGGGCT............................................................................................................1911.001000010
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCCA.........................................................2311.001001000
....................................................................................................CAGGTTTCGTTAGCAACGGGCTA...........................................................................................................2311.001001000
droGri2
---------------------------------------------------------------------------------------TCCACATTGAGCTCGGGTTTCGTCAGCAGCGGGCTGTGATGACTA-A--------AAAACAAGTTCGTTGTCGACGAAACCTGCATACTGTGT-GGAGAGTCAACG-------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCA..........................................................221105.001051050
......................................................................................................................................................TTCGTTGTCGACGAAACCTGC...........................................................21183.0083794
......................................................................................................................................................TTCGTTGTCGACGAAACCTG............................................................20131.0031310
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCA..........................................................21110.0010100
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT.........................................................2316.00660
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCT..........................................................2214.00440
.......................................................................................................................................................TCGTTGTCGACGAAACCTGC...........................................................2013.00330
......................................................................................................................................................TTCGTTGTCGACGAAACCT.............................................................1913.00330
.......................................................................................................................................................TCGTTGTCGACGAAACCTG............................................................1913.00330
.......................................................................................................................................................TCGTTGTCGACGAAACCTGCAT.........................................................2212.00220
........................................................................................................................................................CGTTGTCGACGAAACCTGC...........................................................1912.00220
.....................................................................................................................................................GTTCGTTGTCGACGAAACCTGCA..........................................................2311.00110
......................................................................................................................................................TTCGTTGTCGACGAAACC..............................................................1811.00110
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCACT........................................................2411.00110
......................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC.........................................................2311.00110

Generated: 10/20/2015 at 07:44 PM