ID:

dya_876

 Coordinate:

3L:23909726-23909876 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.9 -20.6 -20.4

Flybase annnotation

CDS [Dyak\GE19475-cds]; exon [dyak_GLEANR_3315:3]; intron [Dyak\GE19475-in]

Repeatable elements

NameClassFamilyStrand
Hoyak2DNAhAT-Ac-
DNAREP1_DYakRCHelitron-
mature
  1. dya_876  3L:23909846-23909870 -
  2. 2L:18453807-18453831 -
  3. X:20705292-20705316 -
  4. X:21769434-21769458 -
  5. 3R:2671021-2671045 -
  6. 3R:14479656-14479680 -
  7. 3R:25113472-25113496 -
  8. 3R:27282393-27282417 -
  9. 4:714875-714899 -
  10. 4:1312477-1312501 -
  11. v2_chrUn_1013:36128-36152 -
  12. v2_chrUn_1256:607-631 -
  13. v2_chrUn_1888:2199-2223 -
  14. v2_chrUn_6728:22326-22350 -
  15. v2_chr2h_random_005:198759-198783 -
  16. v2_chrUn_6984:9790-9814 -
  17. v2_chrUh_004:330212-330236 -
  18. v2_chrUn_001:285857-285881 -
  19. v2_chrUn_004:495671-495695 -
  20. v2_chrUn_006:67444-67468 -
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACTTTTGGCCACGCCCACTCTAACGCCCACAAACCGCCAAAACCTGTCCTTCGCACTTACACTAGCTGAGTAACGGGTATCAGATAGTCGGGGAACTCGACTATAGCGTTCTCTCTTGTTTTTATAATAATTTATATAACTCATTTAAAAATATAAATTAAAGCGTAACACAACAAATTACTAACAACTTTTTATTTTTAGCAATTCGGACGCAATGCAGGAGAACTTATAAAACAAGCAGCAAAACGTCA
**************************************************.(((......((.((..(((.((((........(((((((((...)))))))))..))))))).)).))........((((((((((.............))))))))))..)))....................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V120
male body		 M043
female body
 M056
embryo
.............................................................................................................................................................................................................TCGGACGCAATGCAGGAGAACTTATAAA.................. 28 0 1 1.00 1 1 0 0
.....................................................................................................................................................................................................GCGGCAATTCGGACGCAATGCAGGA............................. 25 3 1 1.00 1 1 0 0
................................................................................................................................................................................................................GACGCAATGCAGGAGAACTT....................... 20 0 1 1.00 1 1 0 0
............................................TGTCCTTCGCACTTACACTAGCTGAG..................................................................................................................................................................................... 26 0 20 0.50 10 0 10 0
...............................AACCGCCAAAACCTGTCCTTCGCACTT................................................................................................................................................................................................. 27 0 3 0.33 1 0 1 0
...................CTAACGCCCACAAACCGCCAAAACC............................................................................................................................................................................................................... 25 0 12 0.08 1 0 0 1
.....................................................................................................................................................................................................GAGGCAATTCGGACGCAAT................................... 19 3 19 0.05 1 1 0 0
..................TCTAACGCCCACAAACCGCCAAAGCC............................................................................................................................................................................................................... 26 1 20 0.05 1 0 0 1
...............CACTCTAACGCCCACAAACCGCCAAAAC................................................................................................................................................................................................................ 28 0 20 0.05 1 0 1 0
..................................................GCGCACTTACACTAGCTGAGTAACGGG.............................................................................................................................................................................. 27 1 20 0.05 1 0 1 0
........................................................TTACACTAGCTGAGTAACGGGTATC.......................................................................................................................................................................... 25 0 20 0.05 1 0 1 0

Anti-sense strand reads

TGAAAACCGGTGCGGGTGAGATTGCGGGTGTTTGGCGGTTTTGGACAGGAAGCGTGAATGTGATCGACTCATTGCCCATAGTCTATCAGCCCCTTGAGCTGATATCGCAAGAGAGAACAAAAATATTATTAAATATATTGAGTAAATTTTTATATTTAATTTCGCATTGTGTTGTTTAATGATTGTTGAAAAATAAAAATCGTTAAGCCTGCGTTACGTCCTCTTGAATATTTTGTTCGTCGTTTTGCAGT
**************************************************.(((......((.((..(((.((((........(((((((((...)))))))))..))))))).)).))........((((((((((.............))))))))))..)))....................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 GSM1528802
follicle cells		 V046
embryo
 V120
male body		 M056
embryo
...................................CGGTTTTGGACAGGAAGCGTGAATG............................................................................................................................................................................................... 25 0 4 2.25 9 0 9 0 0 0
..............................TTTGGCGGTTTTGGACAGGAAGCG..................................................................................................................................................................................................... 24 0 3 0.67 2 2 0 0 0 0
...................................CGGTTTTGGACAGGAAGCGTGAAT................................................................................................................................................................................................ 24 0 4 0.50 2 2 0 0 0 0
..................................GCGGTTTTGGACAGGAAGCGTGAAT................................................................................................................................................................................................ 25 0 4 0.50 2 2 0 0 0 0
...................................CGGTTTTGGACAGGAAGAGTGAATG............................................................................................................................................................................................... 25 1 5 0.40 2 0 2 0 0 0
..............................TTTGGCGGTTTTGGACAGGAA........................................................................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0
.............................GTTTGGCGGTTTTGGACAGGAAGC...................................................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0
..........................GGTGTTTGGCGGTTTTGGACAGGAA........................................................................................................................................................................................................ 25 0 3 0.33 1 1 0 0 0 0
.........................GGGTGTTTGGCGGTTTTGGACAGGAA........................................................................................................................................................................................................ 26 0 3 0.33 1 1 0 0 0 0
................................TGGCGGTTTTGGACAGGAAGCGT.................................................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0
.................................GGCGGTTTTGGACAGGAAGCGT.................................................................................................................................................................................................... 22 0 4 0.25 1 1 0 0 0 0
.................................GGCGGTTTTGGACAGGAAGCGTGAAT................................................................................................................................................................................................ 26 0 4 0.25 1 1 0 0 0 0
..................................GCGGTTTTGGACAGGAAGCGTGAATGT.............................................................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0
....................................GGTTTTGGACAGGAAGCGTGAATGT.............................................................................................................................................................................................. 25 0 4 0.25 1 1 0 0 0 0
........................................TTGGACAGGAAGCGTGAATGTGAT........................................................................................................................................................................................... 24 0 20 0.25 5 1 4 0 0 0
........................CGGGTGTTTGGCGGTTTTGGACAG........................................................................................................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0
....................................GGTTTTGGACAGGACGGGCGAATG............................................................................................................................................................................................... 24 3 8 0.13 1 0 0 1 0 0
...........................GTGTTTGGCGGTTTTGGACAG........................................................................................................................................................................................................... 21 0 8 0.13 1 0 0 0 1 0
........................CGGGTGTTTGGCGGTTTTGG............................................................................................................................................................................................................... 20 0 15 0.07 1 0 0 0 0 1
.........................................TGGACAGGAAGCGTGAATGTGATCG......................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
.................................................AAGCGTGAATGTGATCGACTCATTGCCC.............................................................................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0
..............GGTGAGATTGCGGGTGTTTGGC....................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
..........................................GGACAGGAAGCGTGAATGTGATCGACT...................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
......................................................TGAATGTGATCGACTCATTGCCCATA........................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
..........................................GGACAGGAAGCGTGAATGTGATCGAC....................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
........................CGGGTGTTTGGCGGTTTTG................................................................................................................................................................................................................ 19 0 20 0.05 1 0 0 0 0 1
........................................TTGGACAGGAAGCGTGAATGTGATCG......................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.........................................TGGACAGGAAGCGTGAATGTGAT........................................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 1 0
..............................................................................TAGTCTATCAGCCCCTTGAGCTGATA................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.GAAAACCGGTGCGGGTGAGATT.................................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3L:23909676-23909926 - dya_876 ACTTTT---------------------------GGCCACGCCCA-CTCTAACGCCCACAAACCGCCAAA----AC-----------------------------------------CTGTCC-TTCGC----ACTTACACTAGCT---------------------------GAGTAACGGGTATCAGATAGTCGGGGAA-CTCGACTATA--G-CGTTCTCTCTTGTTTTTATAATAA----------------------TTT-ATATAACT--------C-----------------------------------------------------------------------------------AT-----TT--------AAAA-AT--------ATAAATTAAAGCGTAA----CACAACA--------------AATTAC-------------------------TAACAACT---TT-------------------------TTATTTT---------------------------TAG---CAATTCGGACGCAATGCAGGAGAACTTATAAAACAA-----------------------------GCAG-----CAAAACGTCA
droEre2 scaffold_250:75-292 - AAAGT----------------------------------------------------------GTTGAA----AT-----------------------------------------TTCTCG-TTTGC----ACTTCCATTAGCT---------------------------GAGTACCGGGTATCCGATAGTCGGGGAA-CTTGACTACA--T-CATTCTATCTTGTTTTATTTTAA--------------------------------------------------------------------------------------------------------------------------------------------------AA---ATCATATA-------AGATTAAAA----TGAAGACG--TATATATGACGTA---TTCATGATTTATAGG-----------------CT---CT-------------------------C------------TATTTTT--------------TTG---CAAAT------------------------ATCTCTGAAAAAATCCAAAAATTAATCCAAAATAT-GCAT-----TAAA-----A
droSec2 scaffold_28:686329-686576 - AAAAT----------------------------------------------------------GATAAA----AT-----------------------------------------TGCGCC-TTCGCAAATGCACACACAACCT---------------------------TAGTAGCAGGTATCTGATAGTCGGGGAA-CTCGACTATA--G-CATTCTCTCTGGCTTTTCT---TGTC------------------AAT----------------------G------------------------------------TGATGTGCTTTGGCAACAATTTTTATGTAATTTTTTACATCTAT--------------------------------CAATAT----------TCGA-----------------------ATATAAAA----------------------------AAATTAAAAATTAAAAATTTT--------------------------TGTTCGACTCA---------------------TAGAAACCCCCAAGGACAAATAAAACAA---------------------------TGAAAACATAGCAAAACA--T
droSim2 4:286712-286904 - TGATG--------------------------------------------------------------AA----AT-----------------------------------------TTCGCG-TTCGC----ATTCACACTAGCT---------------------------GAGTAACGGGTATCTGATAGTCGGGGAA-CTCGACTATA--G-CATCCTCCCTTGTTTAAATTCGAA----------------------TCT-GTCTC-ATGTAATAAA-ATA------------------------------------TTATATACG-------------------------------------------------------------------------------------------------------------CATGC-------------------------TAAGAATT---TG-------------------------GTATTTTAAT---------------------ATCTACAGT-----------------ACACGTATGTATAAAACAA-----------------------------CTAC-----CTAACCGGCA
dm3 chr4:352867-353079 - TCTATC---------------------------GATA----------T-AACAGAAAAAT---TATGGA----AT-----------------------------------------TTCGCG-TTCGC----ATGCACACTAGCT---------------------------GAGTAACGGGTATCTGATAGTCGGGAAA-CTCGACTGTA--G-CATTCTCCCGTGTTTAAATTCGAA----------------------TCT-GTCTT-ATCTAATAAA-ATA------------------------------------TTATATACG-------------------------------------------------------------------------------------------------------------CATGC-------------------------CAAGAATT---TG--------------------------TATTTTGAT---------------------GTGTACACT-----------------ACACGTATGTATAAAACAA-----------------------------CTAC-----CTAACCGGCA
droEug1 scf7180000409710:84157-84401 - TCCTCT---------------------------GACAAT----------------------------AG----GT-----------------------------------------GGCGCATTGTGA----ATTTCCACTAGCAAAATAAT-ATTTTAAAATTTTGTAAAACAGTAACGGGTATCTTATAGTCGCGGCA-CCCGACTATA--G-CGTTTCCTCTTGTTGGAAGACAAA----------------------ATTAATAAATTTTAGGCCAA-AATTTAATTTCTTTCG------------------TATTT--CAATAAGATAACGACC-------------------------------------------------------------------------------------CTATATATTTGTCGT---------------------------------------------------------------------------ATT---------------------TAGTGCAAT-----------------AGTGGCTTTAATATCACTG-------------------------CAA-GGAG-----CAAA-----A
droBia1 scf7180000302087:192230-192490 - AATGT-----------------------------CCCACGCCCA-CTCTAACGCCCACAAACGGTTAAAACGCTTAAATCTGCCCTAAAATATAGCTTTGCTGCTTATATATCTCCATTT-----CCCTTTTGCTCCCTTAAGCT---------------------------GAGTAACGGGTATCTGATAGTCGAGGCA-CTCGAATATATAG-CGTTCTTTCTTGTTTTTAG---T---T--------TTGGTAA-T----------------------C-----------------------------------------------------------------------------------AT-----TT--------ACGA-TA--------GTAAATTAAAATGTAA----GA-------------------------------------------CTTTCTTCATATTT-----------------------------------------------------------------TTG---TAATT---------------AAAACTTAGTTTACTA-----------------------------AAAA-----TTGAAAAGCA
droTak1 scf7180000413538:2884-3133 + GTTACG---------------------------G-CGGATCAAAGTTT-AACCCACGAGTTAAGCC-AA----TT-----------------------------------------ATCTCC-TTCGC----TCTCCCTTTAGCT---------------------------GAGTAACGGGTATCTGATAGTCGGGGCA-CTCGACTATA--G-CGTTCTCTCTTGTCTTTTTTCCTATT------------------AATTT-G---------------------------------------------------------CAATAAATTTTCGACC-------------------------------------------------------------------------------------G--TTCCTATGACAGC---TATATGATAAAGTGTACCGATTTTTTCTAATTT--------------------T-----------TAT----------------------TCGAAATTCAT-----------AAATATTT-CATAAAAACTACAAAACTA-----------------------------GAAT-----TAAA-----A
droEle1 scf7180000491024:472014-472192 - TG--------------------------------------------------------------------------------------------------------------------------------------------GCT---------------------------GAGTAACGGGTATCTAGTAGTAGAGAAA-CTCGACTATA--A-AACTC--TCTTGTTTTTTT---T---T--------TTGATAACT----------------------C-----------------------------------------------------------------------------------CT-----TT--------ATAA-AT--------ACAATAT---------TAGT-----------------------AT--------------------------------TATTATTACAAATTAAAAACATTTTC-------TTGCCGTAAC---------------------GGGTATAAT-----------------AAAAATGTTTATAAAACTG-----------------------------GAAAAAGAAGCAAACTTCG
droRho1 scf7180000773776:644-898 - ATTTTCAAATCGGACCATTCTTTAAAAAGTTATGCGTGATCAAAGTTTC------------------------------------------------------------TATCTCCATCTCC-CTCGC----ACTCCCTTTACCT---------------------------GAGTAACGGGTATCTGATAGTCGGGGCA-CCCGACTATA--G-CGTTCTCTCTTGTTTTTTT---T---TTTTTACATAATGTGA-A----------------------T-----------------------------------------------------------------------------------AA-----T-----------------------------------------AGT-----------------------GACCATAGGAAAAAGG-----------------------------GAC--------------------------AACAAGTTCAAATTATCAATTTGAATTCGG---CGATCT---CTTAGTGCTGGCAGCTTTACAGCACGA-----------------------------GCAT-----CAGCA----C
droFic1 scf7180000454115:865693-865811 - TTTGC-------------------------------CACTCCCA-CTTTTACGCCCAC----------------------------------------------------------------------------------CAGCCTTGTGGCCGTGTTCAGGCTCCATATCTAAGTAACGGGTATCTGGTAGTCGGTGCT-CCCAACTATA--G-CGTTCTCTCTTGCTTTTTC---A---A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droKik1 scf7180000302485:18720-18785 + AAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------TTTCCCT---------------------------TAG---CAATTTGGACGTAATGCTGGAGAACTTATAAAGCAA-----------------------------GCAG-----CCAAGCGGCA
droAna3 scaffold_13082:3604224-3604371 + TTTCTA---------------------------TTATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCCATCTCTGTATAATGTACCAATATAATA---TTCTTATT-------ACATGACAA----AAAAAAAT--TTTA-------------------------------------------------------------CCTTA---GCCATTT----------ATTTATTTTT--------------CAG---CAATTTGGTCGAAACGCAGGGGAACTTATAAAACAA-----------------------------GCAG-----CAAAACGACA
droBip1 scf7180000396714:539590-539729 + AG---------------------------------------------------------------------------------------------------------------------------------------------AT---------------------------GAGTAGCGGGCATAATGTAGTCGGGAAA-CTCGACTATA--GCCGTCCTCTCTTGTTTTTAT---T---------------------GATTT-GCATC---------------------------------------------------------A-----------AT------------------------AT-----CT--------ACAACTA--------GTAAACTA-----------------------------------------------------------------------ATTTTACAAATTTTTAAATTT---TGTATGA----------ATGCTTCTTT--------------TAG---CA---------------------------------------------------------------------------------A
dp5 Unknown_group_25:12503-12547 + ACTTT-----------------------------GCCCCGCCCA-CTTCCGCCCCCACAAAGG------------------------------------------------------------------------------------------------------------------GCGAAAATCTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_6:456028-456132 + GT----------------------------------------------------------------------------------------------------------------------------------------------T---------------------------GAGAAGCGGGTATTTTGTAGTCGGAACC-CTCGACTAAG--G-CATTTTTTCTCGTTTGAAAAA--------------AATGTTA-A----------------------A-----------------------------------------------------------------------------------AA-----TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACAAATAAATTAA-----------------------AAGAT-GTAA----------ACGAA
droWil2 scf2_1100000004967:1501477-1501590 - TGGTTT---------------------------TAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTCTTTTGGTTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------AA-AT--------CTACATTGAAAGGTAA----TACAAAC--------------GTTTGT-------------------------CAAAAGTT---AG-------------------------TTATTTT-AA---------------------ATTGATAAG-----------------AGACAATTGA--------------------------------AAAAA-GTAT-----ACAA-----A
droVir3 scaffold_12958:975418-975509 - AAAACA---------------------------AATG---------------------------------------------------------------------------------------------------------------------------------------------AAGGCATCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAAG--------------AACCT--------------------------------------T-------------------------GATAATC---------------------------TAG---CAATTCGGTCGTAACGCTGGAGAACTCATCAAACAA-----------------------------GCAG-----CAAAACGTCA
droMoj3 scaffold_6473:13791745-13791906 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTATCTCCTAGTCGAGCAGTCCCGACTGGA--G-CCTTCTTACTTGTTTTAAAATGAA----------------------AAT-AGGTAAATTAGACTAT-AAA----------------------------------------------------------------------------------------------------------------CTATAT----------TAGT-----------------------AAGCAAAA-------------------------AAAA---AAAATAAC--------------------------AATATGTTTCCATTAACAAA------------------------------AGAAAATACCAAAAAACAA-----------------------AAGAA-GTAA----------CAAAA
droGri2 scaffold_14906:12699683-12699850 + AATCCG---------------------------GACCACGCCCG-CTCAAGCCCCCAAAAACTATAAAA------------------------------------------------------------------------------------------------------------------GCCTAA------------------------------ATTTCCCGAAATT---------------------------TAAGA-GCAAC------------AGT-------------TGCCAAACTTGGAAGTTGG-----------------------------------------------------------------ATTGCTA--------CGAAACTT-------------------------------------GT-------------------------CTAATA------T-------------------------TTTT-------------------------------------------------------------------TACCA--CAAATTTAAAGGCTAACTTGAAGGAT-AGATTAC--TAGGAACCTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
ACTTTT---------------------------GGCCACGCCCA-CTCTAACGCCCACAAACCGCCAAA----AC-----------------------------------------CTGTCC-TTCGC----ACTTACACTAGCT---------------------------GAGTAACGGGTATCAGATAGTCGGGGAA-CTCGACTATA--G-CGTTCTCTCTTGTTTTTATAATAA----------------------TTT-ATATAACT--------C-----------------------------------------------------------------------------------AT-----TT--------AAAA-AT--------ATAAATTAAAGCGTAA----CACAACA--------------AATTAC-------------------------TAACAACT---TT-------------------------TTATTTT---------------------------TAG---CAATTCGGACGCAATGCAGGAGAACTTATAAAACAA-----------------------------GCAG-----CAAAACGTCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGACGCAATGCAGGAGAACTTATAAA....................................................2811.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCAATGCAGGAGAACTT.........................................................2011.00100000010000
.....................................................................................................................TGTCC-TTCGC----ACTTACACTAGCT---------------------------GAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.5010010000000000
...........................................................AACCGCCAAA----AC-----------------------------------------CTGTCC-TTCGC----ACTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.33101000000000
...............................................CTAACGCCCACAAACCGCCAAA----AC-----------------------------------------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.08100100000000
..........................................CA-CTCTAACGCCCACAAACCGCCAAA----AC-----------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000000000
......................................................................................................................................TTACACTAGCT---------------------------GAGTAACGGGTATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
droEre2
AAAGT----------------------------------------------------------GTTGAA----AT-----------------------------------------TTCTCG-TTTGC----ACTTCCATTAGCT---------------------------GAGTACCGGGTATCCGATAGTCGGGGAA-CTTGACTACA--T-CATTCTATCTTGTTTTATTTTAA--------------------------------------------------------------------------------------------------------------------------------------------------AA---ATCATATA-------AGATTAAAA----TGAAGACG--TATATATGACGTA---TTCATGATTTATAGG-----------------CT---CT-------------------------C------------TATTTTT--------------TTG---CAAAT------------------------ATCTCTGAAAAAATCCAAAAATTAATCCAAAATAT-GCAT-----TAAA-----ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droSec2
AAAAT----------------------------------------------------------GATAAA----AT-----------------------------------------TGCGCC-TTCGCAAATGCACACACAACCT---------------------------TAGTAGCAGGTATCTGATAGTCGGGGAA-CTCGACTATA--G-CATTCTCTCTGGCTTTTCT---TGTC------------------AAT----------------------G------------------------------------TGATGTGCTTTGGCAACAATTTTTATGTAATTTTTTACATCTAT--------------------------------CAATAT----------TCGA-----------------------ATATAAAA----------------------------AAATTAAAAATTAAAAATTTT--------------------------TGTTCGACTCA---------------------TAGAAACCCCCAAGGACAAATAAAACAA---------------------------TGAAAACATAGCAAAACA--TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................GTATCTGATAGTCGGGGAA-CTCGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1022000
droSim2
TGATG--------------------------------------------------------------AA----AT-----------------------------------------TTCGCG-TTCGC----ATTCACACTAGCT---------------------------GAGTAACGGGTATCTGATAGTCGGGGAA-CTCGACTATA--G-CATCCTCCCTTGTTTAAATTCGAA----------------------TCT-GTCTC-ATGTAATAAA-ATA------------------------------------TTATATACG-------------------------------------------------------------------------------------------------------------CATGC-------------------------TAAGAATT---TG-------------------------GTATTTTAAT---------------------ATCTACAGT-----------------ACACGTATGTATAAAACAA-----------------------------CTAC-----CTAACCGGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................T---------------------------GAGTAACGGGTATCTGATAGTCGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................26202.9559000000590000000000
....................................................................................................................................................................................................GGAA-CTCGACTATA--G-CATCCTCC........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000010000
................................................................................................................................................................................................................................TTGTTTAAATTCGAA----------------------TCT-GTC...........................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
........................................................................................................................................................................................................................................ATTCGAA----------------------TCT-GTCTC-ATGTAAT.................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
.......................................................................................................................................................................................................................................................................T-GTCTC-ATGTAATAAA-ATA------------------------------------TTATA.................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
....................................................................................................................................ATTCACACTAGCT---------------------------GAGTAACGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.6513000000001300000000
.....................................................................................................................................TTCACACTAGCT---------------------------GAGTAACGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.35700010000006000000
.........................................................................................................................................CACTAGCT---------------------------GAGTAACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.35700000000007000000
.....................................................................................................................................TTCACACTAGCT---------------------------GAGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.35700000000007000000
.........................................................................................................................................CACTAGCT---------------------------GAGTAACGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.25500000000005000000
.....................................................................................................................................TTCACACTAGCT---------------------------GAGTAACGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.25500000000000032000
................................................................................................................................................T---------------------------GAGTAACGGGTATCTGATAGTCGGGGAA-..............................................................................................................................................................................................................................................................................................................................................................................................................................................29200.20400000000400000000
............................................................................................................................................TAGCT---------------------------GAGTAACGGGTATCTGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.15300000000000030000
...............................................................................................................................................................................TAACGGGTATCTGATAGTCGGGGAA-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.15300000000300000000
....................................................................................................................................ATTCACACTAGCT---------------------------GAGTAACGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15300000000300000000
..................................................................................................................................................................................CGGGTATCTGATAGTCGGGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200000020000000000
...............................................................................................................................................................................TAACGGGTATCTGATAGTCGGGGAA-CT............................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000010001000000
.....................................................................................................................................TTCACACTAGCT---------------------------GAGTAACGGGTAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000002000000000
....................................................................................................................................................................................GGTATCTGATAGTCGGGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200000010000010000
.............................................................................................................................CGC----ATTCACACTAGCT---------------------------GA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.10200000000002000000
...........................................................................................................................TTCGC----ATTCACACTAGCT---------------------------GAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10201010000000000000
........................................................................................................................................................................................TCTGATAGTCGGGGAA-CTCGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000000200000000
..................................................................................................................................................................................CGGGTATCTGATAGTCGGGGAA-CTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000001000000
..ATG--------------------------------------------------------------AA----AT-----------------------------------------TTCGCG-TTCGC----A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
......................................................................................................................................TCACACTAGCT---------------------------GAGTAACGGGTATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010000000000000
..............................................................................................................................................................................GTAACGGGTATCTGATAGTCGGGGAA-CT............................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000100000000
...................................................................................................................................................................................GGGTATCTGATAGTCGGGGAA-..............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000000010000
........................................................................................................................................................................................TCTGATAGTCGGGGAA-CTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110000000000000000
.....................................................................................................................................................................................GTATCTGATAGTCGGGGAA-CT............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110000000000000000
........................................................................................................................................................................................TCTGATAGTCGGGGAA-CTCGACTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000010000000000
....................................................................................................................................ATTCACACTAGCT---------------------------GAGTAACGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010000000000000
..............................................................................................................................GC----ATTCACACTAGCT---------------------------GAGTAACGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000100000000
.........................................................................AT-----------------------------------------TTCGCG-TTCGC----ATTCACACTAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000001000000
..................................................................................................................................................................................CGGGTATCTGATAGTCGGGGAA-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000100000000
...................................................................................................................................................................................GGGTATCTGATAGTCGGGGAA-CTCGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000001000000000
..........................................................................................................................................................................................TGATAGTCGGGGAA-CTCGACTATA--G-C...............................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000001000000000
......................................................................................................................CGCG-TTCGC----ATTCACACTAGCT---------------------------GAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000001000000
............................................................................................................................TCGC----ATTCACACTAGCT---------------------------GAGTAACGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05100000000100000000
dm3
TCTATC---------------------------GATA----------T-AACAGAAAAAT---TATGGA----AT-----------------------------------------TTCGCG-TTCGC----ATGCACACTAGCT---------------------------GAGTAACGGGTATCTGATAGTCGGGAAA-CTCGACTGTA--G-CATTCTCCCGTGTTTAAATTCGAA----------------------TCT-GTCTT-ATCTAATAAA-ATA------------------------------------TTATATACG-------------------------------------------------------------------------------------------------------------CATGC-------------------------CAAGAATT---TG--------------------------TATTTTGAT---------------------GTGTACACT-----------------ACACGTATGTATAAAACAA-----------------------------CTAC-----CTAACCGGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.....................................................................................................................................TGCACACTAGCT---------------------------GAGTAACGGGTATCTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.5010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TAACGGGTATCTGATAGTCGGGAAA-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................26190.4280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000002000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000
................................................................................................................................................................................................TCGGGAAA-CTCGACTGTA--G-CATT............................................................................................................................................................................................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGTCGGGAAA-CTCGACTGTA--G-CATT............................................................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CGGGAAA-CTCGACTGTA--G-CAT.............................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
................................................................................................................................................................................AACGGGTATCTGATAGTCGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3060000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000000000000000000000030000000000000000000000000
.................................................................................................................................................................................................CGGGAAA-CTCGACTGTA--G-................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TAACGGGTATCTGATAGTCGGGAAA-..............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000000100000
.......................................................................................................................................................................................ATCTGATAGTCGGGAAA-CTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000
............................................................................................................................................................................GAGTAACGGGTATCTGATAGTCGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000002020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................ACGGGTATCTGATAGTCGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
............................................................................................................................................TAGCT---------------------------GAGTAACGGGTATCTGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GCT---------------------------GAGTAACGGGTATCTGATAGTCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CT---------------------------GAGTAACGGGTATCTGATAGTCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GCT---------------------------GAGTAACGGGTATCTGATAGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................GGGTATCTGATAGTCGGGAAA-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CTAGCT---------------------------GAGTAACGGGTATCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................CACACTAGCT---------------------------GAGTAACGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GGTATCTGATAGTCGGGAAA-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TATCTGATAGTCGGGAAA-CTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CACTAGCT---------------------------GAGTAACGGGTAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
................................................................................................................................................T---------------------------GAGTAACGGGTATCTGATAGTCGGGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.1530000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TCTGATAGTCGGGAAA-CTCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000
.....................................................................................................................................................................................GTATCTGATAGTCGGGAAA-CTCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................25160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................GTAACGGGTATCTGATAGTCGGGAAA-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................27170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................CACTAGCT---------------------------GAGTAACGGGTATCTGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TATCTGATAGTCGGGAAA-CTCGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
................................................................................................................................................................................AACGGGTATCTGATAGTCGGGAAA-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
........................................................................................................................................................................................TCTGATAGTCGGGAAA-CTCGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000
........................................................................................................................................ACACTAGCT---------------------------GAGTAACGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................GGGTATCTGATAGTCGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...............................................................................................................................................CT---------------------------GAGTAACGGGTATCTGATAGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................CACACTAGCT---------------------------GAGTAACGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................GGGTATCTGATAGTCGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................AGCT---------------------------GAGTAACGGGTATCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
............................................................................................................................................................................GAGTAACGGGTATCTGATAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TAGCT---------------------------GAGTAACGGGTATCTGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TATCTGATAGTCGGGAAA-CTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................TAACGGGTATCTGATAGTCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000
...............................................................................................................................................................................TAACGGGTATCTGATAGTCGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
................................................................................................................................................T---------------------------GAGTAACGGGTATCTGATAGTCGGGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
............................................................................................................................................TAGCT---------------------------GAGTAACGGGTATCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000
.............................................................................................................................................AGCT---------------------------GAGTAACGGGTATCTGATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................ATCTGATAGTCGGGAAA-CTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000
....................................................................................................................................................................................GGTATCTGATAGTCGGGAAA-CTCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................26150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................GGGTATCTGATAGTCGGGAAA-CTCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................27150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................CGGGTATCTGATAGTCGGGAAA-CTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................26170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................CGGGTATCTGATAGTCGGGAAA-CTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................25180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................T---------------------------GAGTAACGGGTATCTGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CTAGCT---------------------------GAGTAACGGGTATCTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TGATAGTCGGGAAA-CTCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................ACACTAGCT---------------------------GAGTAACGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GAGTAACGGGTATCTGATAGTCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................GGGTATCTGATAGTCGGGAAA-CTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................GAGTAACGGGTATCTGATAGTCGGGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GTATCTGATAGTCGGGAAA-CTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TAGCT---------------------------GAGTAACGGGTATCTGATAGTCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................T---------------------------GAGTAACGGGTATCTGATAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................T---------------------------GAGTAACGGGTATCTGATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................GGTATCTGATAGTCGGGAAA-..............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................GCT---------------------------GAGTAACGGGTATCTGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.........................................................................................................................................CACTAGCT---------------------------GAGTAACGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GCT---------------------------GAGTAACGGGTATCTGATAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TAGCT---------------------------GAGTAACGGGTATCTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
droEug1
TCCTCT---------------------------GACAAT----------------------------AG----GT-----------------------------------------GGCGCATTGTGA----ATTTCCACTAGCAAAATAAT-ATTTTAAAATTTTGTAAAACAGTAACGGGTATCTTATAGTCGCGGCA-CCCGACTATA--G-CGTTTCCTCTTGTTGGAAGACAAA----------------------ATTAATAAATTTTAGGCCAA-AATTTAATTTCTTTCG------------------TATTT--CAATAAGATAACGACC-------------------------------------------------------------------------------------CTATATATTTGTCGT---------------------------------------------------------------------------ATT---------------------TAGTGCAAT-----------------AGTGGCTTTAATATCACTG-------------------------CAA-GGAG-----CAAA-----ASizeHit CountTotal NormTotal
No Reads
droBia1
AATGT-----------------------------CCCACGCCCA-CTCTAACGCCCACAAACGGTTAAAACGCTTAAATCTGCCCTAAAATATAGCTTTGCTGCTTATATATCTCCATTT-----CCCTTTTGCTCCCTTAAGCT---------------------------GAGTAACGGGTATCTGATAGTCGAGGCA-CTCGAATATATAG-CGTTCTTTCTTGTTTTTAG---T---T--------TTGGTAA-T----------------------C-----------------------------------------------------------------------------------AT-----TT--------ACGA-TA--------GTAAATTAAAATGTAA----GA-------------------------------------------CTTTCTTCATATTT-----------------------------------------------------------------TTG---TAATT---------------AAAACTTAGTTTACTA-----------------------------AAAA-----TTGAAAAGCASizeHit CountTotal NormTotal
No Reads
droTak1
GTTACG---------------------------G-CGGATCAAAGTTT-AACCCACGAGTTAAGCC-AA----TT-----------------------------------------ATCTCC-TTCGC----TCTCCCTTTAGCT---------------------------GAGTAACGGGTATCTGATAGTCGGGGCA-CTCGACTATA--G-CGTTCTCTCTTGTCTTTTTTCCTATT------------------AATTT-G---------------------------------------------------------CAATAAATTTTCGACC-------------------------------------------------------------------------------------G--TTCCTATGACAGC---TATATGATAAAGTGTACCGATTTTTTCTAATTT--------------------T-----------TAT----------------------TCGAAATTCAT-----------AAATATTT-CATAAAAACTACAAAACTA-----------------------------GAAT-----TAAA-----ASizeHit CountTotal NormTotal
No Reads
droEle1
TG--------------------------------------------------------------------------------------------------------------------------------------------GCT---------------------------GAGTAACGGGTATCTAGTAGTAGAGAAA-CTCGACTATA--A-AACTC--TCTTGTTTTTTT---T---T--------TTGATAACT----------------------C-----------------------------------------------------------------------------------CT-----TT--------ATAA-AT--------ACAATAT---------TAGT-----------------------AT--------------------------------TATTATTACAAATTAAAAACATTTTC-------TTGCCGTAAC---------------------GGGTATAAT-----------------AAAAATGTTTATAAAACTG-----------------------------GAAAAAGAAGCAAACTTCGSizeHit CountTotal NormTotal
No Reads
droRho1
ATTTTCAAATCGGACCATTCTTTAAAAAGTTATGCGTGATCAAAGTTTC------------------------------------------------------------TATCTCCATCTCC-CTCGC----ACTCCCTTTACCT---------------------------GAGTAACGGGTATCTGATAGTCGGGGCA-CCCGACTATA--G-CGTTCTCTCTTGTTTTTTT---T---TTTTTACATAATGTGA-A----------------------T-----------------------------------------------------------------------------------AA-----T-----------------------------------------AGT-----------------------GACCATAGGAAAAAGG-----------------------------GAC--------------------------AACAAGTTCAAATTATCAATTTGAATTCGG---CGATCT---CTTAGTGCTGGCAGCTTTACAGCACGA-----------------------------GCAT-----CAGCA----CSizeHit CountTotal NormTotal
No Reads
droFic1
TTTGC-------------------------------CACTCCCA-CTTTTACGCCCAC----------------------------------------------------------------------------------CAGCCTTGTGGCCGTGTTCAGGCTCCATATCTAAGTAACGGGTATCTGGTAGTCGGTGCT-CCCAACTATA--G-CGTTCTCTCTTGCTTTTTC---A---A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droKik1
AAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------TTTCCCT---------------------------TAG---CAATTTGGACGTAATGCTGGAGAACTTATAAAGCAA-----------------------------GCAG-----CCAAGCGGCASizeHit CountTotal NormTotal
No Reads
droAna3
TTTCTA---------------------------TTATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCCATCTCTGTATAATGTACCAATATAATA---TTCTTATT-------ACATGACAA----AAAAAAAT--TTTA-------------------------------------------------------------CCTTA---GCCATTT----------ATTTATTTTT--------------CAG---CAATTTGGTCGAAACGCAGGGGAACTTATAAAACAA-----------------------------GCAG-----CAAAACGACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AG---------------------------------------------------------------------------------------------------------------------------------------------AT---------------------------GAGTAGCGGGCATAATGTAGTCGGGAAA-CTCGACTATA--GCCGTCCTCTCTTGTTTTTAT---T---------------------GATTT-GCATC---------------------------------------------------------A-----------AT------------------------AT-----CT--------ACAACTA--------GTAAACTA-----------------------------------------------------------------------ATTTTACAAATTTTTAAATTT---TGTATGA----------ATGCTTCTTT--------------TAG---CA---------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
dp5
ACTTT-----------------------------GCCCCGCCCA-CTTCCGCCCCCACAAAGG------------------------------------------------------------------------------------------------------------------GCGAAAATCTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................GCCCCGCCCA-CTTCCGCCCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020002000000
..TTT-----------------------------GCCCCGCCCA-CTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
.CTTT-----------------------------GCCCCGCCCA-CTTCCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
droPer2
GT----------------------------------------------------------------------------------------------------------------------------------------------T---------------------------GAGAAGCGGGTATTTTGTAGTCGGAACC-CTCGACTAAG--G-CATTTTTTCTCGTTTGAAAAA--------------AATGTTA-A----------------------A-----------------------------------------------------------------------------------AA-----TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACAAATAAATTAA-----------------------AAGAT-GTAA----------ACGAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TGGTTT---------------------------TAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTCTTTTGGTTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------AA-AT--------CTACATTGAAAGGTAA----TACAAAC--------------GTTTGT-------------------------CAAAAGTT---AG-------------------------TTATTTT-AA---------------------ATTGATAAG-----------------AGACAATTGA--------------------------------AAAAA-GTAT-----ACAA-----ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
AAAACA---------------------------AATG---------------------------------------------------------------------------------------------------------------------------------------------AAGGCATCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAAG--------------AACCT--------------------------------------T-------------------------GATAATC---------------------------TAG---CAATTCGGTCGTAACGCTGGAGAACTCATCAAACAA-----------------------------GCAG-----CAAAACGTCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAACGCTGGAGAACTCAT.......................................................2011.001100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTCGTAACGCTGGAGAACTCATCA.....................................................2711.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACAA-----------------------------GCAG-----CAAAACGT..1911.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAACGCTGGAGAACT..........................................................1711.001000000000000000000000000000000000000000000000000000000000000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAACTCATCAAACAA-----------------------------GCA................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTATCTCCTAGTCGAGCAGTCCCGACTGGA--G-CCTTCTTACTTGTTTTAAAATGAA----------------------AAT-AGGTAAATTAGACTAT-AAA----------------------------------------------------------------------------------------------------------------CTATAT----------TAGT-----------------------AAGCAAAA-------------------------AAAA---AAAATAAC--------------------------AATATGTTTCCATTAACAAA------------------------------AGAAAATACCAAAAAACAA-----------------------AAGAA-GTAA----------CAAAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................TAGACTAT-AAA----------------------------------------------------------------------------------------------------------------CTATAT----------TAGT-----------------------AAGCA..........................................................................................................................................................................................2651.608800000
.................................................................................................................................................................................................................................................................................TAGACTAT-AAA----------------------------------------------------------------------------------------------------------------CTATAT----------TAGT-----------------------AAGC...........................................................................................................................................................................................2561.006500010
...............................................................................................................................................................................................GTCGAGCAGTCCCGACTGGA--G-C...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAA------------------------------AGAAAATACCAAAAAA...................................................2020.501000010
........................................................................................................................................................................................................TCCCGACTGGA--G-CCTTCTTACTTGTT..................................................................................................................................................................................................................................................................................................................................................................................................................2620.501000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAAA------------------------------AGAAAATACCAAAAAACAA-----------------------A........................2720.501100000
.................................................................................................................................................................................................................................................................................TAGACTAT-AAA----------------------------------------------------------------------------------------------------------------CTATAT----------TAGT-----------------------AAGCAA.........................................................................................................................................................................................2750.402200000
.................................................................................................................................................................................................................................................................................TAGACTAT-AAA----------------------------------------------------------------------------------------------------------------CTATAT----------TAGT-----------------------AAGCAAA........................................................................................................................................................................................2850.201100000
..................................................................................................................................................................................................................................................................................AGACTAT-AAA----------------------------------------------------------------------------------------------------------------CTATAT----------TAGT-----------------------AAGC...........................................................................................................................................................................................2470.141100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC--------------------------AATATGTTTCCATTAACAAA------------------------------A..................................................................23200.051000010
.................................................................................................................................................................................................................................................................................TAGACTAT-AAA----------------------------------------------------------------------------------------------------------------CTATAT----------TAGT-----------------------AAG............................................................................................................................................................................................24200.051100000
droGri2
AATCCG---------------------------GACCACGCCCG-CTCAAGCCCCCAAAAACTATAAAA------------------------------------------------------------------------------------------------------------------GCCTAA------------------------------ATTTCCCGAAATT---------------------------TAAGA-GCAAC------------AGT-------------TGCCAAACTTGGAAGTTGG-----------------------------------------------------------------ATTGCTA--------CGAAACTT-------------------------------------GT-------------------------CTAATA------T-------------------------TTTT-------------------------------------------------------------------TACCA--CAAATTTAAAGGCTAACTTGAAGGAT-AGATTAC--TAGGAACCTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:32 PM