ID:

dya_875

 Coordinate:

3L:23908172-23908322 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.2 -13.1 -13.0

Flybase annnotation

exon [dyak_GLEANR_3315:4]; CDS [Dyak\GE19475-cds]; intron [Dyak\GE19475-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron-
mature
  1. dya_875  3L:23908273-23908298 -
  2. X:4885565-4885590 -
  3. v2_chrUn_6631:189720-189745 -
  4. chrXh:141740-141765 -
  5. v2_chr2L_random_028:1101483-1101508 -
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TAAATTTCTATCAATTGGCAAAATCGCCCACTCTAACGCCCACAAACCGCTAAAAACTGTCAGTGCTGAAATTTCTCCTTCACGCTTCCACTAGCTGAGTAATGGGTATCAGATAGTCGGAAAATTTGTCTATAGCGTTCTTTCTTGTTTTATTGCCATTGTTTTTTCTTATCCGATACTTTTCGGTGTTTGACACTGCAGGAGGGAATTGTAATGGATCCGATGACTTACAGCGAGAAGCGTTCACGCCA
**************************************************************************.......((((((((((((.((((..........)))).)))).)))............))))).......********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528802
follicle cells		 V120
male body		 M056
embryo
 M043
female body
 V046
embryo
 V058
head
....................................................................................................................................................................................................................AATGGATCCGATGACTTACAGCGAGAA............ 27 0 1 17.00 17 17 0 0 0 0 0
..........................................................................CTCCTTCACGCTTCCACTAGCTGAGT....................................................................................................................................................... 26 0 5 4.00 20 20 0 0 0 0 0
....................................................................................................................................................................................................................AATGGATCCGATGACTTCCAGCGAGAA............ 27 1 1 2.00 2 2 0 0 0 0 0
........................................................................................................................................................................................................CGAGGGAATTGTAATGGATCCGATGACT....................... 28 1 1 2.00 2 0 2 0 0 0 0
..........................................................................................................................................................................................................AGGGAATTGTAATGGATCCGATGACT....................... 26 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................................................................TGAGGAGGGAATTGTAATG................................... 19 2 1 1.00 1 0 0 0 1 0 0
.............................................................................................................................................................................................................................GATGACTTACAGCGAGAAGCGT........ 22 0 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................................................................................................AGGGAATTGTAATGGATCC.............................. 19 0 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................................................................................................AATGGATCCGATGTCTTACAGCGGGAA............ 27 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................TGACGAGGGAATTGTAATGGATC............................... 23 3 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................................................AATGGATCCGATGCCTTACAGCGAGAA............ 27 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................TGTCTATAGCGTTCTTTCT.......................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0
..........................................................................CTCCTTCACGCTTCCACTCGCTGAGT....................................................................................................................................................... 26 1 6 0.33 2 2 0 0 0 0 0
..........................................................................CTCCTTCACGCTTGCACTAGCTGAGT....................................................................................................................................................... 26 1 5 0.20 1 1 0 0 0 0 0
..........................................................................CTCCTTCACGCTTCCACGAGCTGAGT....................................................................................................................................................... 26 1 5 0.20 1 1 0 0 0 0 0
...................................................................................................................................................................................................ATTGAGGAGGGAATTGTAAT.................................... 20 3 9 0.11 1 0 1 0 0 0 0
..........................................................................CTCCTTCCCGCTTCCACTAGCTGAGT....................................................................................................................................................... 26 1 9 0.11 1 1 0 0 0 0 0
..................................................................................................GTAATGGGTATCAGATAGTCG.................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0
.............................ACTCTAACGCCCACAAACCGCTA....................................................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 1 0 0
...................................................................................................................................ATAGCGTTCTTTCTTGGG...................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

ATTTAAAGATAGTTAACCGTTTTAGCGGGTGAGATTGCGGGTGTTTGGCGATTTTTGACAGTCACGACTTTAAAGAGGAAGTGCGAAGGTGATCGACTCATTACCCATAGTCTATCAGCCTTTTAAACAGATATCGCAAGAAAGAACAAAATAACGGTAACAAAAAAGAATAGGCTATGAAAAGCCACAAACTGTGACGTCCTCCCTTAACATTACCTAGGCTACTGAATGTCGCTCTTCGCAAGTGCGGT
**********************************************************************************************************.......((((((((((((.((((..........)))).)))).)))............))))).......************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 GSM1528802
follicle cells		 M056
embryo
 V120
male body		 M026
head
..........................................................................GAGGAAGTGCGAAGGTGATCGACT......................................................................................................................................................... 24 0 5 0.60 3 0 3 0 0 0
................................................................................................CTCATTACCCATAGTCTATCA...................................................................................................................................... 21 0 20 0.55 11 11 0 0 0 0
................CCATTTTTTCGGGTGAGATTGC..................................................................................................................................................................................................................... 22 3 4 0.25 1 0 0 1 0 0
......................TAGCGGGTGAGATTGCGGGTG................................................................................................................................................................................................................ 21 0 5 0.20 1 0 0 0 1 0
......................TAGCGGGTGAGATTGCGG................................................................................................................................................................................................................... 18 0 6 0.17 1 0 0 0 0 1
...............................................................................................ACTCATTACCCATAGTCTAT........................................................................................................................................ 20 0 20 0.10 2 2 0 0 0 0
................................................................................................CTCATTACCCATCGTCTATCA...................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0
..................................TTGCGGGTGTTTGGCGATTTTT................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0
................................................................................................CTCATTACCCATAGTCTATC....................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
.........................................................................................TGATCGACTCATTACCCATA.............................................................................................................................................. 20 0 20 0.05 1 0 0 0 1 0
.................................................................................................TCATTACCCATAGTCTATCAGC.................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3L:23908122-23908372 - dya_875 TAAATTTCTATCAATTGGCA------------AAATCGCCCACTCTAACGCCCACAAACCGCTAAAAA-CTGTCA------------------------------------------------------------------------------------------------------------------------------GT-------------GC-------------TGAA--ATTTCTCCTT----------------------------C----ACGCTT-CCACT---A-------GCTGAGTAATGGGTATCAGATAGTCGGA-A----AATTTGTCTATAGC-GTTCTTT-CTTGTTTTA-------TTGCC---------------------------ATTGTT----------------------TTTTCTTATCCGATACTTTTCGG------------------------------------TGTTTGACACTGC-----AGG--AGGGAATTGTAATGGATCCG--ATGACTTACAGCG-----AGAAGCGTTCACGCCA
droEre2 scaffold_4784:3939473-3939690 - CCAATTTCTGCCAATCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAGAAAA-AT-------------TT-------------GGAA--GTTTCTCGTT----------------------------C----GCTCTT-CCTCC---A-------GCTGAGTAATGGGTATCTGATAGTGGGG-G----AAATCGACTATAGC-GTTCTCT-CTCGCTTAAA------GTTACTTCCATGTGT----------------------------------TTTAGT-----ACAT-------GCCATTCACAGA------------------------------------ATTTCTAGATTGA-----AAG--GGTTAAATTTAAT----T----ATGGTATGCAGCTAATTCGCAAACATACTCGCTA
droSec2 scaffold_55:178027-178330 + TAAACTTCTACCGATTTGCA-------------ATT----------------------------------TGCCA-------------------------TG----------------------------CCCACACTTTTGAACAATTTTTAAACTTTTCCTCATTTTATTCACCAATATATATCGATATCCCAGAAAA-AT-------------TA-------------TGAA--ATTTCGCGTT----------------------------C----GAATTC-ACACT---A-------GCTGAGTAACGGGTATCTAATAGTCGGG-G----AACTCGTTTATAGC-ATCATCT-CTTGTTTTATTTTGCGTTCAATGTTTTCCTTGGCATTGTTGTTGCTTTGCGATT--TTTATT--------------TTTCTCTGACAATAA------TT------------------------------------TATTTATCATTT--------------------------TGGCG--AAGGCTTAAAGCG-----AGAAGGGTATATATCA
droSim2 3l:23711768-23712092 + TAAATTTCTATCGATTTTTAAAAAAGCTTTTAGCCACGCCCACTCTAACGCCCTAAAGCCGCCCACAC---------------------------------------------------------------------ATTTGAACAATTTTTAAATTCTTTCTCATTTTATTCCGCAATATCTATCGATGTCCCAGAAAAAAT-------------GA-------------TGAA--ATTTCGCTTT----------------------------C----GCATTC-ACTCT---A-------GCTGAGTAACGGGTATCTGATAGTCGGG-G----AACTCGACTATAGC-ATTCTCT-ATTGTTTTTGTTTC----C-----------------------------ATTTTATTTTCATTTTTTCCATTTAAATACCC-------GGTACTC----------------------------------------------------GCAGAGTAAA--AGGG---TATACTAGATTCGTTGTAACAGGCAGAA-----GGAAGCGTTTCCGACC
dm3 chr3L:23323140-23323359 - CGC------------------------------------CCACTCTTTCACCCACAAAACGCCCAAAC-CTGCCA-------------------------CG----------------------------CCCACAC----------------------------------------------------------------------------------------------------TTTTCGCGTT----------------------------T----TCGCTT-CCACT---A-------GCTTAGTACCGTGCATCGGATAGTCAGG-G----AATTCT----------CTCTCT-CTTGTTTTT---------TATTAT------------------------AATGCA----------------------ATTTATTCTCCGATTATTATTGG------------------------------------ACTTCTACACTGC-----AGG--AAGGAATTGTTATGGATCCC--ATGACCTACAGCG-----AAAAGCGTTCACGTCA
droEug1 scf7180000409230:508992-509187 + TGAGTTTCTATCCG------------------GCCACGCCCGCTCTAACACCCACAAACCGCGGAACA-CTGTGG-------------------------GGTCTATAATAATAATAATGCTTTCTCCGAC---------------------------------------------AAT----------------------------------------------------------AGGTGGCGCT------------------------TG--G----GTAATTTCCACT---A-------A-CAAGTAACGGGTATCTTATAGTCGCG-G----CACTCGACTATAGC-GTTTCCT-CTAGTTCTTT------TTC-------------------------------TTTT----------------------T--------------------------------------------------------------------------------------------------TCG--GTGGCTTAC------------------------A
droBia1 scf7180000302291:2847368-2847598 - GAATAATCTAACAAAATTCC------------ACAACGCCCACTCTAACACCCAAA-GCCT-------------------------------------------------------------------------------------------------------------------------------------AAAAAA-AT-------------CGTAAGTTTGAACGTTGAA--ATCTCACAATCTCGCTTTGCTGCTTGTCTATCTCCAT--------CTCC-TCTTT---A-------CCTGTGTAACAAGTATCTGATAGTCGGG-G----CACTAGCCTATAGA-TTTCTTT-CTTATTTTA-------ATTTT---------------------------TTCTGA----------------------GCCTCTAAGT-------------------------------------------------TGGTTAATGCTC--------C--AAGAAAATGCAAAGGA----------------------------------------
droTak1 scf7180000415611:708-954 - AAAAGTTATACGCAAT----------------------------------------------------------------CAAAAATTATATATCTATCTCC------------------------CTCGCACTCCCTTTAG-CTG------------------------------------------------------AGTTACGATTATTAGTCGGGACA--------C--C--AACCCGCGTT----------------------------C----GCACTC-CCTTT---A-------GCTGAGTGACGGGTATTAGATAGTCGGG-ACAACAACCCGACTATAGC-GTTCTCT-CTTGTTATA-------TTTACC--------------------------TTTTTA------------------------------------------CTA------------------------------------TTTTTAGCGCTGG-----TCA--CGGGAAATGT-ATGTATGTA--TGTACATATTGCA-----AGAATTTTTCCCCCCA
droEle1 scf7180000490557:7029-7239 - TAAAGTTTA-TAAATTTCTCTGCCGCTGCTTAGCCACTGATCGGCTGCTGTTCTGCTGCTGCTAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA--------TAAGAAAGAG-----AGAGAATTACAGAACAGAGAATCGGG-T----AACTCGACTATAGC-GTTTTTTTTTTGTTATT-------C-------------------------------------------------------------TT-------GCAACTTGTAAAATTTTTGTCTAATGCGGAAGGCTCAATGGTAGTAGTTGTTTGACGTCGT-----AGG--TGAACATT------------------------------------------------
droRho1 scf7180000769712:533-787 + TCAATACCTATCGAAATGTAGAAGAAATTTT-------------TCAAATCGGACCATTCGTTAAAAAGTTATGCGTGATCAAAGTTTCTATCTCCA-----------------------------------------------------------------------------------------------------------------------------------------------TCTCCCT----------------------------C----GCACTC-CCTTT---A-------CCTGAGTAACGGGTATCTGATAGTCGGG-G----CATCCGACTATAGC-GTTCTCT-CTTGTTTTTATTTGAACTT-------------------------------------------------------------TTCCTTTGGAACT-------------------------------------TTAC-TTTTTAATTATGT-----AAGAAAGGGGATTGTTTTAGGTT----ACAGTTTCCCGAT-----ATGAGCTTTCTCGACT
droFic1 scf7180000453495:181810-181946 + CAAACCTTACCCAACGC-AC-----------------------------------------------------------------------------------------------------------------CCACCTAGG-CCA------------------------------------------------------ATGGAGAAACCTAAGCCAATGCA--------G--CCACCTAAGT--------------------------------AAATGCAGGC-TCCAT---T-------TCTGAGTAACGGGAATCTGAAAATCGGG-A----AACCTCACTATTGC-GTTCTCT-CTTGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302682:1552992-1553176 + TAAGTTTATTTAA-TTT-AA------------ATAACTTTTTCT----------------------------------------------------------------------------------TTGGCTTAGCTTTCTAAGCTGTATTTG---------------------------------------------------------------------------------A-------------------------------GTCTTTGTT-TAATGT--------TTTGTAATAGAGCCTTGAGTGCCGGGTATCTCATATTCGGG-G----CACTCGACAATGGC-GTTCTTT-CTTTGTTTTTTTTCAGCTTATTGCTCTCTTT----------------------------------ATTATT-----ATATTTTTTT--GT----------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13248:3799147-3799218 - AG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGTACCGGGTATCAATTAGTCAAG-A----AACTCGACTATAGT----CGAT-CTTGTTGTA----------ACT------------------------TTGTTGTT----------------------TTTT--------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396270:29571-29683 - TTAATGTTTAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------TT-------------AAAG--GTTAGTT--------------------------------AAATGTAGGT-GGAAG---A-------GATGAGAACCGGGTATAATATAGTCGGA-A----AACTCGACTATAGCCGTCCTTT-CTTGTTCCT-------C-C-----------------------------ATTGTA----------------------TT----------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group3a:1562076-1562163 + GTCGTAAAAACAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-ATTGGTT-GTTGTTGAA-------AGATC---------------------------ATTAGT----------------------TGTTCCCGTCGTAGATACTTCGG------------------------------------TGTTTGTTGTTGT-----AGA--GGGAAATT------------------------------------------------
droPer2 scaffold_3:980767-980859 - CATTATTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCATTCGTAACT-------------------------------------AATTTTATTTAATG-TGT-----AGG--AAGGTATTGTTATGGATCCC--ATGACCTACAGTG-----AGAAGCGTTCTCGTCA
droWil2 scf2_1100000004762:1018698-1018784 - AAGTTCGCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTC-TTTCTTT-CTTTTTTTT-------TTTTT---------------------------TTTGTT----------------------GTGTTTTGTTCGATGACGATCTG------------------------------------TAGCTGTAGCTGT-----AGG--AGGGAA--------------------------------------------------
droVir3 scaffold_12910:46713-46813 - TCAAATAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTAATAGC-GTTTTGC-AGTTTTGCA-------ATGCC---------------------------ACTGTA----------------------ATTTTGTATACCAGACCTTTCAG------------------------------------CTTTCT----CGT-----GGA--GAGGAATGATATAAGATTC-------------------------------------
droMoj3 scaffold_6500:28802060-28802232 + TATATTTTCATAAATGAGTT-------------TTC----------------------------------TATTT-------------------------AA----------------------------TTTATATTTTTAAAT-------------------------------------------------------------ACATCGAAATTGAAATTTTAGCCATAGT--------AAATG----------------------------G----GCATTT-TTATT---A-------GTTGGGTTCAGGGTATCT---AGTCGAGCA----CTCTCGACTAGAGT-TTTCTTA-CTTGTTTTT-------TTTTT---------------------------TTTTTT----------------------TTTTTTTAATTGAT----------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:12702567-12702673 + TTGTTTTCTAGCTGAAGGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTAGTAAATCGTATTTG-----------------------------------TGTATAAACCTTTT-----AGG--AGGGAATTGTAATGGATCCC--ATGACGTACAGTG-----ACAAACGGTCACGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TAAATTTCTATCAATTGGCA------------AAATCGCCCACTCTAACGCCCACAAACCGCTAAAAA-CTGTCA------------------------------------------------------------------------------------------------------------------------------GT-------------GC-------------TGAA--ATTTCTCCTT----------------------------C----ACGCTT-CCACT---A-------GCTGAGTAATGGGTATCAGATAGTCGGA-A----AATTTGTCTATAGC-GTTCTTT-CTTGTTTTA-------TTGCC---------------------------ATTGTT----------------------TTTTCTTATCCGATACTTTTCGG------------------------------------TGTTTGACACTGC-----AGG--AGGGAATTGTAATGGATCCG--ATGACTTACAGCG-----AGAAGCGTTCACGCCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGATCCG--ATGACTTACAGCG-----AGAA............27117.0017000000000017
.................................................................................................................................................................................................................................................CTCCTT----------------------------C----ACGCTT-CCACT---A-------GCTGAGT........................................................................................................................................................................................................................................................................2654.0020000000000020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAATTGTAATGGATCCG--ATGACT............................2611.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--ATGACTTACAGCG-----AGAAGCGT........2211.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAATTGTAATGGATCC.....................................1911.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................TGTCTATAGC-GTTCTTT-CT....................................................................................................................................................................................................................1911.00100010000000
....................................................................................................................................................................................................................................................................................................................GTAATGGGTATCAGATAGTCG.....................................................................................................................................................................................................................................................21200.05101000000000
.........................................ACTCTAACGCCCACAAACCGCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................ATAGC-GTTCTTT-CTTGGG................................................................................................................................................................................................................18200.05100000100000
droEre2
CCAATTTCTGCCAATCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAGAAAA-AT-------------TT-------------GGAA--GTTTCTCGTT----------------------------C----GCTCTT-CCTCC---A-------GCTGAGTAATGGGTATCTGATAGTGGGG-G----AAATCGACTATAGC-GTTCTCT-CTCGCTTAAA------GTTACTTCCATGTGT----------------------------------TTTAGT-----ACAT-------GCCATTCACAGA------------------------------------ATTTCTAGATTGA-----AAG--GGTTAAATTTAAT----T----ATGGTATGCAGCTAATTCGCAAACATACTCGCTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droSec2
TAAACTTCTACCGATTTGCA-------------ATT----------------------------------TGCCA-------------------------TG----------------------------CCCACACTTTTGAACAATTTTTAAACTTTTCCTCATTTTATTCACCAATATATATCGATATCCCAGAAAA-AT-------------TA-------------TGAA--ATTTCGCGTT----------------------------C----GAATTC-ACACT---A-------GCTGAGTAACGGGTATCTAATAGTCGGG-G----AACTCGTTTATAGC-ATCATCT-CTTGTTTTATTTTGCGTTCAATGTTTTCCTTGGCATTGTTGTTGCTTTGCGATT--TTTATT--------------TTTCTCTGACAATAA------TT------------------------------------TATTTATCATTT--------------------------TGGCG--AAGGCTTAAAGCG-----AGAAGGGTATATATCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................TTC-ACACT---A-------GCTGAGTAACGGG..................................................................................................................................................................................................................................................................22200.50109001
...........................................................................................................................................................................................................................................................................................TTC-ACACT---A-------GCTGAGTAACGGGTA................................................................................................................................................................................................................................................................24200.4088000
..........................................................................................................................................................................................................................................................................................ATTC-ACACT---A-------GCTGAGTAACGGG..................................................................................................................................................................................................................................................................23200.3572050
..........................................................................................................................................................................................................................................................................................ATTC-ACACT---A-------GCTGAGTAACGGGT.................................................................................................................................................................................................................................................................24200.2040040
...............................................................................................................................................................................................................................................................................................ACACT---A-------GCTGAGTAACGGGTATCTAA...........................................................................................................................................................................................................................................................2660.1710100
...............................................................................................................................................................................................................................................TTCGCGTT----------------------------C----GAATTC-ACACT---A-------GC.............................................................................................................................................................................................................................................................................2360.1710010
..............................................................................................................................................................................................TCCCAGAAAA-AT-------------TA-------------TGAA--ATTTCGCGTT----------------------------...........................................................................................................................................................................................................................................................................................................28200.1022000
.........................................................................................................................................................................................................AT-------------TA-------------TGAA--ATTTCGCGTT----------------------------...........................................................................................................................................................................................................................................................................................................18200.0510010
..............................................................................................................................................................................................TCCCAGAAAA-AT-------------TA-------------TGAA--ATTTCGCGT........................................................................................................................................................................................................................................................................................................................................27200.0511000
droSim2
TAAATTTCTATCGATTTTTAAAAAAGCTTTTAGCCACGCCCACTCTAACGCCCTAAAGCCGCCCACAC---------------------------------------------------------------------ATTTGAACAATTTTTAAATTCTTTCTCATTTTATTCCGCAATATCTATCGATGTCCCAGAAAAAAT-------------GA-------------TGAA--ATTTCGCTTT----------------------------C----GCATTC-ACTCT---A-------GCTGAGTAACGGGTATCTGATAGTCGGG-G----AACTCGACTATAGC-ATTCTCT-ATTGTTTTTGTTTC----C-----------------------------ATTTTATTTTCATTTTTTCCATTTAAATACCC-------GGTACTC----------------------------------------------------GCAGAGTAAA--AGGG---TATACTAGATTCGTTGTAACAGGCAGAA-----GGAAGCGTTTCCGACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................T---A-------GCTGAGTAACGGGTATCTGATA.........................................................................................................................................................................................................................................................24208.001600000160000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGTAACAGGCAGAA-----GGA.............2261.831100000014402000000
.................................................................................................................................................................................................................................................................................................................TGAGTAACGGGTATCTGATAGTC......................................................................................................................................................................................................................................................23201.4529000000000000290000
............................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGGG-G----AACTCGA......................................................................................................................................................................................................................................23201.2024000000012570000000
........................................................................................................................................................................................................................................................................................................................................GGG-G----AACTCGACTATAGC-ATTCTC........................................................................................................................................................................................................................24201.0521000000000000210000
..........................................................................................................................................................................................................................................................................................................................................G-G----AACTCGACTATAGC-ATTCTCT-ATT...................................................................................................................................................................................................................2651.00500000020200010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGTAACAGGCAGAA-----GGAAGCGTT.......2851.00500000002110010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGTAACAGGCAGAA-----GGAA............2360.83500000000041000000
.................................................................................................................................................................................................................................................................................................................TGAGTAACGGGTATCTGATAGT.......................................................................................................................................................................................................................................................22200.7515000000000000150000
.................................................................................................................................................................................................................................................................................................................TGAGTAACGGGTATCT.............................................................................................................................................................................................................................................................16200.7014000000000014000000
...................................................................................................................................................................................................................................................................................................T---A-------GCTGAGTAACGGGTATCTGATAGT.......................................................................................................................................................................................................................................................26200.6513000000000000130000
.................................................................................................................................................................................................................................................................................................................TGAGTAACGGGTATCTGATAGTCGGG-..................................................................................................................................................................................................................................................26200.6513000000000013000000
.................................................................................................................................................................................................................................................................................................................TGAGTAACGGGTATCTGATAGTCG.....................................................................................................................................................................................................................................................24200.5511000000110000000000
.................................................................................................................................................................................................................................................................................................................TGAGTAACGGGTATCTGATAGTCGGG-G----.............................................................................................................................................................................................................................................27200.501000000000002080000
..........................................................................................................................................................................................................................................................................................................................................G-G----AACTCGACTATAGC-ATTCTCT-......................................................................................................................................................................................................................23200.45900000000000081000
.........................................................................................................................................................................................................................................................................................................................GGGTATCTGATAGTCGGG-G----AACT.........................................................................................................................................................................................................................................23200.45900000070020000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAA--AGGG---TATACTAGATTCGTTGTT...............................2690.44400000010110010000
.................................................................................................................................................................................................................................................................................................................TGAGTAACGGGTATCTGATAGTCGG....................................................................................................................................................................................................................................................25200.40800000000000080000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAGAA-----GGAAGCGT........18200.35700000000007000000
.......................................................................................................................................................................................................................................................................................................................................CGGG-G----AACTCGACTATAGC-ATTCT.........................................................................................................................................................................................................................24200.35700100001000050000
.......................................................................................................................................................................................................................................................................................................................................CGGG-G----AACTCGACTATAGC-ATTCTCT-......................................................................................................................................................................................................................26200.35700000000000070000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAA-----GGAAGCGT........15200.35700000000007000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGTAACAGGCAGAA-----GG..............2160.33200000010010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTCGTTGTAACAGGC.........................1860.33201100000000000000
........................................................................................................................................................................................................................................................................................................................................GGG-G----AACTCGACTATAGC-ATTCTCT-......................................................................................................................................................................................................................25200.30600000000000060000
..............................................................................................................................................................................................................................................................................................................................TCTGATAGTCGGG-G----AACTCGACTAT..................................................................................................................................................................................................................................25200.30600300001200000000
............................................................................................................................................................................................................................................................................................TC-ACTCT---A-------GCTGAGTAACGGGTATCTGA...........................................................................................................................................................................................................................................................2870.29200000010001000000
..........................................................................................................................................................................................................................................................................................................................................G-G----AACTCGACTATAGC-ATTCTCT-AT....................................................................................................................................................................................................................2570.29200000000200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAACAGGCAGAA-----GGAAGCGTT.......24110.27300000001002000000
..........................................................................................................................................................................................................................................................................................................................................G-G----AACTCGACTATAGC-ATTCTC........................................................................................................................................................................................................................22200.25500000000000050000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAA-----GGAAGCGTT.......23200.25500000000203000000
..........................................................................................................................................................................................................T-------------GA-------------TGAA--ATTTCGCT.........................................................................................................................................................................................................................................................................................................................................1580.25200000000002000000
...............................................................................................................................................................................CAATATCTATCGATGTCCCAGAA........................................................................................................................................................................................................................................................................................................................................................................................2390.22200010001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------------------------------------------GCAGAGTAAA--AGGG---TATACTAG.........................................24140.21300010000002000000
...........................TTTTAGCCACGCCCACTCTAACGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.20100000010000000000
.....TTCTATCGATTTTTAAAAAAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.20100000000001000000
...........................................................................................................................................................................TCCGCAATATCTATCGATGTCCCAGA.........................................................................................................................................................................................................................................................................................................................................................................................2650.20100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAGATTCGTTGTAACAGGCAGA......................2550.20100000000100000000
............................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGGG-G----AACTCGACT....................................................................................................................................................................................................................................25200.20400000004000000000
......................................................................................................................................................................TTTATTCCGCAATATCTATCGATGTC..............................................................................................................................................................................................................................................................................................................................................................................................2650.20100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATTTAAATACCC-------GGTACTC----------------------------------------------------GCAGAA..............................................................2850.20100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGATTCGTTGTAACAGGCAA.......................2650.20100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGATTCGTTGTAACAGGCA........................2550.20100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATACCC-------GGTACTC----------------------------------------------------GCAGAGTAAA--........................................................2750.20100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------GGTACTC----------------------------------------------------GCAGAGTAAA--AGGG---TA...............................................2450.20100000000001000000
.......................................................................................................................................................................................................................................................................................................................................CGGG-G----AACTCGACTATAGC-ATTCTC........................................................................................................................................................................................................................25200.20400000004000000000
.........................................................................................................................................................................................................................................................................................................................................................TATAGC-ATTCTCT-ATTGTTTTTGTT..........................................................................................................................................................................................................2550.20100000001000000000
.................................................................................................................................................................................................................................................................................................................TGAGTAACGGGTATCTGATAG........................................................................................................................................................................................................................................................21200.20400000040000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGATTCGTTGTAACAGGCAG.......................2650.20100000000000010000
............GATTTTTAAAAAAGCTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.20100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATACCC-------GGTACTC----------------------------------------------------GCAGAGTAAA--A.......................................................2750.20100000000000010000
..........................................................................................................................................................................................................................................................................................................................................G-G----AACTCGACTATAGC-ATTCTCT-A.....................................................................................................................................................................................................................24110.18200000000000020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGTAAA--AGGG---TATACTAGATTCGT...................................27110.18200000000101000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGTAACAGGCAGA......................1860.17100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGTAACAGGCAGAA-----GGACTT..........2560.17100000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGTAACAGGCAGAA-----GGAA............2260.17100000000010000000
.................................................................................................................................................................................................................................................................................................................................................AACTCGACTATAGC-ATTCTCT-ATTGTT................................................................................................................................................................................................................2760.17101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGTAACAGGCAGAA-----GGAT............2360.17100000000000001000
...............................AGCCACGCCCACTCTAACGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.17100010000000000000
................................................................................................................................................................................................CCAGAAAAAAT-------------GA-------------TGAA--AT...............................................................................................................................................................................................................................................................................................................................................1960.17100000000001000000
.........................................................................................................................................................................................................................................................................................................................GGGTATCTGATAGTCGGG-G----AA...........................................................................................................................................................................................................................................21200.15300000002100000000
........................................................................................................................................................................................................................................................................................................................................GGG-G----AACTCGACTATAGC-ATTC..........................................................................................................................................................................................................................22200.15300000000000030000
.................................................................................................................................................................................................................................................................................................................TGAGTAACGGGTATCTGATAGTCGGG-G----A............................................................................................................................................................................................................................................28200.15300000003000000000
.................................................................................................................................................................................................................................................................................................................TGAGTAACGGGTATCTGATAGTCGGG-G----AA...........................................................................................................................................................................................................................................29200.15300000030000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAA--AGGG---TATACTAGATTCGT...................................22200.15300000000003000000
.........................................................................................................................................................................................................................................................................................................................................GG-G----AACTCGACTATAGC-ATTCTCT-AT....................................................................................................................................................................................................................2670.14100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGG---TATACTAGATTCGTTGTAA..............................2270.14100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGG---TATACTAGATTCGTTGTAA..............................2370.14100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------------------------------GCAGAGTAAA--AGGG---TATACTAGA........................................24140.14200000000200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAA--AGGG---TATACTAGATTCGTTGT................................2670.14100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------------------------------------------GCAGAGTAAA--AGGG---TATACTAGA........................................25140.14200010000001000000
...........................................................................................................................................................................................................................................................................................TTC-ACTCT---A-------GCTGAGTAACGGGTATCTGA...........................................................................................................................................................................................................................................................2970.14100000000000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------------------------------------------GCAGAGTAAA--AGGG---TATACTAGAT.......................................26140.14200000000002000000
..........................................................................................................................................................................................................................................................................................ATTC-ACTCT---A-------GCTGAGTAACGGGT.................................................................................................................................................................................................................................................................2490.11100000001000000000
...........................................................................................................................................................................................................................................................................................TTC-ACTCT---A-------GCTGAGTAACGGGTA................................................................................................................................................................................................................................................................2490.11100000000000010000
.............................................................................................................................................................................................................................................................................................C-ACTCT---A-------GCTGAGTAACG....................................................................................................................................................................................................................................................................1890.11100000000001000000
...........................................................................................................................................................................................................................................................................................TTC-ACTCT---A-------GCTGAGTAACGGGTAT...............................................................................................................................................................................................................................................................2590.11100000000000001000
..........................................................................................................................................................................................................................................................................................ATTC-ACTCT---A-------GCTGAGTAACGGGTA................................................................................................................................................................................................................................................................2590.11100000000001000000
............................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGGG-G----AACTCGACTA...................................................................................................................................................................................................................................26200.10200000020000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAA--AGGG---TATACTAGATTCG....................................21200.10200000000002000000
..............................................................................................................................................................................................................................................................................................................................TCTGATAGTCGGG-G----AACTCGAC.....................................................................................................................................................................................................................................22200.10200000010001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--AGGG---TATACTAGATTCGTTGTT...............................24100.10100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTAAA--AGGG---TATACTAGATTCGTT..................................26200.10200000010001000000
...................................................................................................................................................................................................................................................................................................T---A-------GCTGAGTAACGGGTATCTGATAG........................................................................................................................................................................................................................................................25200.10200000002000000000
.........................................................................................................................................................................................................................................................................................................................GGGTATCTGATAGTCGGG-G----AACTC........................................................................................................................................................................................................................................24200.10200000001010000000
...........................................................................................................................................................................................................................................................................................................................GTATCTGATAGTCGGG-G----AACTCGA......................................................................................................................................................................................................................................24200.10200000000200000000
............................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGGG-G----AACTCGAC.....................................................................................................................................................................................................................................24200.10200000020000000000
............................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGGG-G----AACT.........................................................................................................................................................................................................................................20200.10220000000000000000
........................................................................................................................................................................................................................................................................................................................CGGGTATCTGATAGTCGGG-G----AACTCGAC.....................................................................................................................................................................................................................................28200.10200000000200000000
....................................................................................................................................................................................................................................................................................................................................................TCGACTATAGC-ATTCTCT-......................................................................................................................................................................................................................18200.10200000000002000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAA-----GGAAG...........19200.10200000000002000000
.......................................................................................................................................................................................................................................................................................................A-------GCTGAGTAACGGGTATCTGATAGTC......................................................................................................................................................................................................................................................26200.10200000000002000000
.......................................................................................................................................................................................................................................................................................................A-------GCTGAGTAACGGGTATCTGATAGT.......................................................................................................................................................................................................................................................25200.10200000000200000000
...............................................................................................................................................................................................................................................................................................................................CTGATAGTCGGG-G----AACTCGAC.....................................................................................................................................................................................................................................21200.10202000000000000000
.........................................................................................................................................................................................................................................AA--ATTTCGCTTT----------------------------C----GCA...................................................................................................................................................................................................................................................................................................16110.09100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAACAGGCAGAA-----GGAAGCGTTTC.....26110.09100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGG---TATACTAGATTCGTTGTT...............................21110.09100000000001000000
..................................................................................................................................................................................................................................................................................................................................................ACTCGACTATAGC-ATTCTCT-A.....................................................................................................................................................................................................................21120.08100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTC----------------------------------------------------GCAGAGTAAA--AGGG---TATACTAG.........................................27120.08100000000001000000
.................................................................................................................................................................................................................................................................................................TCT---A-------GCTGAGTAACGGGTATCTG............................................................................................................................................................................................................................................................23120.08100000000000010000
..........................................................................................................................................................................................................................................................................................................................................G-G----AACTCGACTATAGC-ATTCTCT-AA....................................................................................................................................................................................................................25120.08100000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAACAGGCAGAA-----GGA.............18130.08100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGTAAA--AGGG---TATACTAGATT......................................24140.07100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAGTAAA--AGGG---TATACTAGA........................................23140.07100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------------------------------------------GCAGAGTAAA--AGGG---TATACTA..........................................23150.07100000000001000000
.....................................GCCCACTCTAACGCCCTAAAGCCGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26170.06100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGTAAA--AGGG---TATACT...........................................19190.05100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------------------------------GCAGAGTAAA--AGGG---TA...............................................17190.05100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGTAAA--AGGG---TATA.............................................17190.05100000000001000000
..............................................................................................................................................................................................................................................................................................................................TCTGATAGTCGGG-G----AACTCGA......................................................................................................................................................................................................................................21200.05100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAA--AGGG---TATACTAGATTCGTTG.................................25200.05100000001000000000
.........................................................................................................................................................................................................................................................................................................................GGGTATCTGATAGTCGGG-G----AACTCGA......................................................................................................................................................................................................................................26200.05100000001000000000
................................................................................................................................................................................................................................................................................................................................TGATAGTCGGG-G----AACTCGACT....................................................................................................................................................................................................................................21200.05100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAA--AGGG---TATACTAGA........................................17200.05100000000001000000
..................................................................................................................................................................................................................................................................................................................................................ACTCGACTATAGC-ATTC..........................................................................................................................................................................................................................17200.05100000010000000000
...................................................................................................................................................................................................................................................................................................T---A-------GCTGAGTAACGGGTATCTGATAGTC......................................................................................................................................................................................................................................................27200.05100000000000010000
...........................................................................................................................................................................................................................................................................................................................GTATCTGATAGTCGGG-G----A............................................................................................................................................................................................................................................18200.05110000000000000000
.......................................................................................................................................................................................................................................................................................................................................CGGG-G----AACTCGACTATAGC-ATT...........................................................................................................................................................................................................................22200.05100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAA--AGGG---TATACTAGATTCGTT..................................25200.05100000010000000000
.......................................................................................................................................................................................................................................................................................................................ACGGGTATCTGATAGTCGGG-G----.............................................................................................................................................................................................................................................21200.05100000000000010000
.......................................CCACTCTAACGCCCTAAAGCCGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAA-----GGAAGCGTTTCCGA..26200.05100000000001000000
.............................................................................................................................................................................................................................................................................................................................ATCTGATAGTCGGG-G----AACTCGAC.....................................................................................................................................................................................................................................23200.05100000010000000000
..................................CACGCCCACTCTAACGCCCTAAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000001000000000
......................................................................................................................................................................................................................................................................................................................AACGGGTATCTGATAGTCGGG-G----AACTC........................................................................................................................................................................................................................................27200.05100000001000000000
...................................................................................................................................................................................................................................................................................................................................TAGTCGGG-G----AACTCGACTATAGC-..............................................................................................................................................................................................................................23200.05100000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAA--AGGG---TATACTAGATTCGTTG.................................26200.05100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAGGCAGAA-----GGAA............17200.05100000000001000000
.....................................................................................................................................................................................................................................................................................................................TAACGGGTATCTGATAGTCGGG-G----A............................................................................................................................................................................................................................................24200.05100000000000010000
.......................................................................................................................................................................................................................................................................................................A-------GCTGAGTAACGGGTATCTGATAGTCG.....................................................................................................................................................................................................................................................27200.05100000010000000000
................................................................................................................................................................................................................................................................................................................................TGATAGTCGGG-G----AACTCGAC.....................................................................................................................................................................................................................................20200.05100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAA-----GGAAGCGTTTCCG...27200.05100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCAGAA-----GGAAGCGTTTCCG...22200.05100000000001000000
.................................................................................................................................................................................................................................................................................................................................................AACTCGACTATAGC-ATTCTCT-......................................................................................................................................................................................................................21200.05110000000000000000
........................................................................................................................................................................................................................................................................................................................CGGGTATCTGATAGTCGGG-G----AA...........................................................................................................................................................................................................................................22200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................AACGGGTATCTGATAGTCGGG-G----AACTCG.......................................................................................................................................................................................................................................28200.05100000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAA--AGGG---TATACTAGATTCGTTG.................................24200.05100000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGCAGAA-----GGAA............15200.05100000000001000000
..................................................................................................................................................................................................................................................................................................................................................ACTCGACTATAGC-AT............................................................................................................................................................................................................................15200.05100000000001000000
.........................................................................................................................................................................................................................................................................................................................GGGTATCTGATAGTCGGG-G----AACTCGAC.....................................................................................................................................................................................................................................27200.05100000010000000000
.......................................................................................................................................................................................................................................................................................................................................CGGG-G----AACTCGACTATAGC-ATTCTCA-......................................................................................................................................................................................................................26200.05100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAA-----GGAAGCGTT.......21200.05100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAGGCAGAA-----GGAAGCGT........21200.05100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAA-----GGAA............18200.05100000000001000000
.......................................................................................................................................................................................................................................................................................................................................CGGG-G----AACTCGACTATAGC-AT............................................................................................................................................................................................................................21200.05100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTAAA--AGGG---TATACTAGA........................................21200.05100000000001000000
...................................................................................................................................................................................................................................................................................................................................TAGTCGGG-G----AACTCGACTATAGC-ATT...........................................................................................................................................................................................................................26200.05100000000000001000
.....................................................................................................................................................................................................................................................................................................................TAACGGGTATCTGATA.........................................................................................................................................................................................................................................................16200.05100000001000000000
............................................................................................................................................................................................................................................................................................................................................G----AACTCGACTATAGC-ATT...........................................................................................................................................................................................................................18200.05100000010000000000
...................................................................................................................................................................................................................................................................................................................AGTAACGGGTATCTGATAGTCG.....................................................................................................................................................................................................................................................22200.05100000010000000000
...........................................................................................................................................................................................................................................................................................................................GTATCTGATAGTCGGG-..................................................................................................................................................................................................................................................16200.05100000000001000000
............................................................................................................................................................................................................................................................................................................................................G----AACTCGACTATAGC-ATTCT.........................................................................................................................................................................................................................20200.05100000000000001000
..................................................................................................................................................................................................................................................................................................CT---A-------GCTGAGTAACGGGTATCTGAT..........................................................................................................................................................................................................................................................24200.05100000000000001000
.................................CCACGCCCACTCTAACGCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000000000
dm3
CGC------------------------------------CCACTCTTTCACCCACAAAACGCCCAAAC-CTGCCA-------------------------CG----------------------------CCCACAC----------------------------------------------------------------------------------------------------TTTTCGCGTT----------------------------T----TCGCTT-CCACT---A-------GCTTAGTACCGTGCATCGGATAGTCAGG-G----AATTCT----------CTCTCT-CTTGTTTTT---------TATTAT------------------------AATGCA----------------------ATTTATTCTCCGATTATTATTGG------------------------------------ACTTCTACACTGC-----AGG--AAGGAATTGTTATGGATCCC--ATGACCTACAGCG-----AAAAGCGTTCACGTCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................CGCGTT----------------------------T----TCGCTT-CCACT---A-------GC.............................................................................................................................................................................................................................................................................21110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--ATGACCTACAGCG-----AAAAGCGTTC......2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTACAGCG-----AAAAGCGTTT......2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCC--ATGACCTACAGCG-----AAAAGCGTT.......2613.0030000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTATTGG------------------------------------ACTTCTACACTGC-----AA...........................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200
....................................................................................................................................CACAC----------------------------------------------------------------------------------------------------TTTTCGCGTT----------------------------T----TCG...................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACCTACAGCG-----AAAAGCGTTC......2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTACAGCG-----AAAAGCGTTC......2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTACAGCG-----AAAAGCGTTCAC....2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................AGTACCGTGCATCGGATA.........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TCGGATAGTCAGG-G----AATT.........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGATCCC--ATGACCTACAGCG-----AAT.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AGTCAGG-G----AATTCT----------CTCTCT-......................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGGATCCC--ATGACCTACAGCG-----AA..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TCAGG-G----AATTCT----------CTCTCT-CTTGT.................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TCGGATAGTCAGG-G----AATTCT----------CTCT.........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATTGTTATGGATCCC--ATGACCT...........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--AAGGAATTGTTATGGATC......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTATTGG------------------------------------ACTTCTACACTGC-----A............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTATTGG------------------------------------ACTTCTACACTGC-----AG...........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACAGCG-----AAAAGCGTTCA.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCG-----AAAAGCGTTCACG...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAGCG-----AAAAGCGTTCAC....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCCC--ATGACCTACAGC......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGG------------------------------------ACTTCTACACTGC-----A............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTATTGG------------------------------------ACTTCTACACTG...................................................................2111.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--ATGACCTACAGCG-----AAAAGCGTT.......2411.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTATGGATCCC--ATGACCTACAGCG-----A...............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTACAGCG-----AAAAGCGTTC......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--ATGACCTACAGCG-----AAAAGCGTTC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GTACCGTGCATCGGATAGTCAGG-..................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTGG------------------------------------ACTTCTACACTGC-----AG...........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACTGC-----AGG--AAGGAATTGTTATGGA........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTATGGATCCC--ATGACCTACAGCG-----AAA.............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................CCAAAC-CTGCCA-------------------------CG----------------------------CCCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
TGAGTTTCTATCCG------------------GCCACGCCCGCTCTAACACCCACAAACCGCGGAACA-CTGTGG-------------------------GGTCTATAATAATAATAATGCTTTCTCCGAC---------------------------------------------AAT----------------------------------------------------------AGGTGGCGCT------------------------TG--G----GTAATTTCCACT---A-------A-CAAGTAACGGGTATCTTATAGTCGCG-G----CACTCGACTATAGC-GTTTCCT-CTAGTTCTTT------TTC-------------------------------TTTT----------------------T--------------------------------------------------------------------------------------------------TCG--GTGGCTTAC------------------------ASizeHit CountTotal NormTotal
No Reads
droBia1
GAATAATCTAACAAAATTCC------------ACAACGCCCACTCTAACACCCAAA-GCCT-------------------------------------------------------------------------------------------------------------------------------------AAAAAA-AT-------------CGTAAGTTTGAACGTTGAA--ATCTCACAATCTCGCTTTGCTGCTTGTCTATCTCCAT--------CTCC-TCTTT---A-------CCTGTGTAACAAGTATCTGATAGTCGGG-G----CACTAGCCTATAGA-TTTCTTT-CTTATTTTA-------ATTTT---------------------------TTCTGA----------------------GCCTCTAAGT-------------------------------------------------TGGTTAATGCTC--------C--AAGAAAATGCAAAGGA----------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AAAAGTTATACGCAAT----------------------------------------------------------------CAAAAATTATATATCTATCTCC------------------------CTCGCACTCCCTTTAG-CTG------------------------------------------------------AGTTACGATTATTAGTCGGGACA--------C--C--AACCCGCGTT----------------------------C----GCACTC-CCTTT---A-------GCTGAGTGACGGGTATTAGATAGTCGGG-ACAACAACCCGACTATAGC-GTTCTCT-CTTGTTATA-------TTTACC--------------------------TTTTTA------------------------------------------CTA------------------------------------TTTTTAGCGCTGG-----TCA--CGGGAAATGT-ATGTATGTA--TGTACATATTGCA-----AGAATTTTTCCCCCCASizeHit CountTotal NormTotal
No Reads
droEle1
TAAAGTTTA-TAAATTTCTCTGCCGCTGCTTAGCCACTGATCGGCTGCTGTTCTGCTGCTGCTAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA--------TAAGAAAGAG-----AGAGAATTACAGAACAGAGAATCGGG-T----AACTCGACTATAGC-GTTTTTTTTTTGTTATT-------C-------------------------------------------------------------TT-------GCAACTTGTAAAATTTTTGTCTAATGCGGAAGGCTCAATGGTAGTAGTTGTTTGACGTCGT-----AGG--TGAACATT------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCAATACCTATCGAAATGTAGAAGAAATTTT-------------TCAAATCGGACCATTCGTTAAAAAGTTATGCGTGATCAAAGTTTCTATCTCCA-----------------------------------------------------------------------------------------------------------------------------------------------TCTCCCT----------------------------C----GCACTC-CCTTT---A-------CCTGAGTAACGGGTATCTGATAGTCGGG-G----CATCCGACTATAGC-GTTCTCT-CTTGTTTTTATTTGAACTT-------------------------------------------------------------TTCCTTTGGAACT-------------------------------------TTAC-TTTTTAATTATGT-----AAGAAAGGGGATTGTTTTAGGTT----ACAGTTTCCCGAT-----ATGAGCTTTCTCGACTSizeHit CountTotal NormTotal
No Reads
droFic1
CAAACCTTACCCAACGC-AC-----------------------------------------------------------------------------------------------------------------CCACCTAGG-CCA------------------------------------------------------ATGGAGAAACCTAAGCCAATGCA--------G--CCACCTAAGT--------------------------------AAATGCAGGC-TCCAT---T-------TCTGAGTAACGGGAATCTGAAAATCGGG-A----AACCTCACTATTGC-GTTCTCT-CTTGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TAAGTTTATTTAA-TTT-AA------------ATAACTTTTTCT----------------------------------------------------------------------------------TTGGCTTAGCTTTCTAAGCTGTATTTG---------------------------------------------------------------------------------A-------------------------------GTCTTTGTT-TAATGT--------TTTGTAATAGAGCCTTGAGTGCCGGGTATCTCATATTCGGG-G----CACTCGACAATGGC-GTTCTTT-CTTTGTTTTTTTTCAGCTTATTGCTCTCTTT----------------------------------ATTATT-----ATATTTTTTT--GT----------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGTACCGGGTATCAATTAGTCAAG-A----AACTCGACTATAGT----CGAT-CTTGTTGTA----------ACT------------------------TTGTTGTT----------------------TTTT--------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TTAATGTTTAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------TT-------------AAAG--GTTAGTT--------------------------------AAATGTAGGT-GGAAG---A-------GATGAGAACCGGGTATAATATAGTCGGA-A----AACTCGACTATAGCCGTCCTTT-CTTGTTCCT-------C-C-----------------------------ATTGTA----------------------TT----------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
GTCGTAAAAACAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-ATTGGTT-GTTGTTGAA-------AGATC---------------------------ATTAGT----------------------TGTTCCCGTCGTAGATACTTCGG------------------------------------TGTTTGTTGTTGT-----AGA--GGGAAATT------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CATTATTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCATTCGTAACT-------------------------------------AATTTTATTTAATG-TGT-----AGG--AAGGTATTGTTATGGATCCC--ATGACCTACAGTG-----AGAAGCGTTCTCGTCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AAGTTCGCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTC-TTTCTTT-CTTTTTTTT-------TTTTT---------------------------TTTGTT----------------------GTGTTTTGTTCGATGACGATCTG------------------------------------TAGCTGTAGCTGT-----AGG--AGGGAA--------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TCAAATAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTAATAGC-GTTTTGC-AGTTTTGCA-------ATGCC---------------------------ACTGTA----------------------ATTTTGTATACCAGACCTTTCAG------------------------------------CTTTCT----CGT-----GGA--GAGGAATGATATAAGATTC-------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATACCAGACCTTTCAG------------------------------------CTTTCT----CG...................................................................2714.004000000000000000000000000001110000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TAATAGC-GTTTTGC-AGTTTTGCA-------ATG...................................................................................................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATACCAGACCTTTCAG------------------------------------CTTTCT----.....................................................................2511.001000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTATACCAGACCTTTCAG------------------------------------CTTTCT----.....................................................................2811.001000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTGCA-------ATGCC---------------------------ACTGTA----------------------ATTTTGTATA................................................................................................................................2620.501000000000000000000000000000010000000000000000000000000000000000
droMoj3
TATATTTTCATAAATGAGTT-------------TTC----------------------------------TATTT-------------------------AA----------------------------TTTATATTTTTAAAT-------------------------------------------------------------ACATCGAAATTGAAATTTTAGCCATAGT--------AAATG----------------------------G----GCATTT-TTATT---A-------GTTGGGTTCAGGGTATCT---AGTCGAGCA----CTCTCGACTAGAGT-TTTCTTA-CTTGTTTTT-------TTTTT---------------------------TTTTTT----------------------TTTTTTTAATTGAT----------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................T-------------------------------------------------------------ACATCGAAATTGAAATTTTAGCCA........................................................................................................................................................................................................................................................................................................................................................25201.00201600040
..........................................................................................................................................................................................................................................................................................................................GGTATCT---AGTCGAGCA----CTCTCGAC.....................................................................................................................................................................................................................................2420.501000010
................................................................................................................................................T-------------------------------------------------------------ACATCGAAATTGAAATTTTAGCCATAG.....................................................................................................................................................................................................................................................................................................................................................28200.255400010
...............................................................................................................................................AT-------------------------------------------------------------ACATCGAAATTGAAATTTTAGCC.........................................................................................................................................................................................................................................................................................................................................................25200.204400000
................................................................................................................................................T-------------------------------------------------------------ACATCGAAATTGAAATTTTAGC..........................................................................................................................................................................................................................................................................................................................................................23200.153000030
....................................................................................................................................................................................................................................................................................................................................................TCGACTAGAGT-TTTCTTA-CTTGT.................................................................................................................................................................................................................23200.153300000
.................................................................................................................................................................................................................TCGAAATTGAAATTTTAGCCATAGT--------............................................................................................................................................................................................................................................................................................................................................25200.153200010
.........................................................................................................................................................................................................................................T--------AAATG----------------------------G----GCATTT-TTATT---A-------GTTGGGT........................................................................................................................................................................................................................................................................26200.102000002
...................................................................................................................................................................................................................GAAATTGAAATTTTAGCC.........................................................................................................................................................................................................................................................................................................................................................18200.102000020
.............................................................................................................................................................................................................................................................................................................................ATCT---AGTCGAGCA----CTCTCGAC.....................................................................................................................................................................................................................................21200.102000020
...................................................................................................................................................................................................................................................................................................................................................CTCGACTAGAGT-TTTCTTA-CTTGTTT...............................................................................................................................................................................................................26200.051000010
................................................................................................................................................................................................................ATCGAAATTGAAATTTTAGCCATAGT--------............................................................................................................................................................................................................................................................................................................................................26200.051100000
.........................................................................................................................................................................................................................GAAATTTTAGCCATAGT--------ATT.........................................................................................................................................................................................................................................................................................................................................20200.051100000
...............................................................................................................................................AT-------------------------------------------------------------ACATCGAAATTGAAATTTTAGC..........................................................................................................................................................................................................................................................................................................................................................24200.051100000
....................................................................................................................................................................................................................AAATTGAAATTTTAGCCATAGT--------A...........................................................................................................................................................................................................................................................................................................................................23200.051100000
....................................................................................................................................................................................................................AAATTGAAATTTTAGCCATAGT--------AAAT........................................................................................................................................................................................................................................................................................................................................26200.051100000
.........................................................................................................................................................................................................................................T--------AAATG----------------------------G----GCATTT-TTATT---A-------GTTGGGTTC......................................................................................................................................................................................................................................................................28200.051000001
....................................................................................................................................................................................................................................................................................................................................................TCGACTAGAGT-TTTCTTA-CTTGTTTTT-------......................................................................................................................................................................................................27200.051100000
..................................................................................................................................................................................................................................................AAATG----------------------------G----GCATTT-TTATT---A-------GTTGG..........................................................................................................................................................................................................................................................................23200.051100000
....................................................................................................................................TATATTTTTAAAT-------------------------------------------------------------ACATCGAAATTG....................................................................................................................................................................................................................................................................................................................................................................25200.051100000
................................................................................................................................................................................................................ATCGAAATTGAAATTTTAGCCATA......................................................................................................................................................................................................................................................................................................................................................24200.051000010
............................................................................................................................................TAAAT-------------------------------------------------------------ACATCGAAATTGAAATTTTAGC..........................................................................................................................................................................................................................................................................................................................................................27200.051100000
.........................................................................................................................................................................................................................................................................................................................................AGCA----CTCTCGACTAGAGT-TTTCTT........................................................................................................................................................................................................................24200.051100000
.....................................................................................................................................................................................................................................................TG----------------------------G----GCATTT-TTATT---A-------GTTGGGT........................................................................................................................................................................................................................................................................22200.051000010
.......................................................................................................................................................................................................................TTGAAATTTTAGCCATAGT--------AAATG----------------------------G----......................................................................................................................................................................................................................................................................................................25200.051100000
..........................................................................................................................................TTTAAAT-------------------------------------------------------------ACATCGAAATTGAAATTTT.............................................................................................................................................................................................................................................................................................................................................................26200.051000010
droGri2
TTGTTTTCTAGCTGAAGGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTAGTAAATCGTATTTG-----------------------------------TGTATAAACCTTTT-----AGG--AGGGAATTGTAATGGATCCC--ATGACGTACAGTG-----ACAAACGGTCACGGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:32 PM