ID:

dya_867

 Coordinate:

3L:23459662-23459812 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.9 -19.9 -19.9

Flybase annnotation

CDS [Dyak\GE22654-cds]; exon [dyak_GLEANR_6310:3]; intron [Dyak\GE22654-in]

Repeatable elements

NameClassFamilyStrand
Homo2DNAhAT-Ac-
Gypsy4-I_Dya-intLTRGypsy-
Gypsy4-LTR_DyaLTRGypsy-
mature
  1. dya_867  3L:23459778-23459802 +
  2. 3L:23467012-23467036 +
  3. v2_chrUn_645:65673-65697 +
star
  1. dya_867  3L:23459668-23459693 +
  2. v2_chrUn_645:57842-57867 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTCCAGCTCCGCCGATGCCGCGGTGTCGGGCCCCACGTTGGGCGCCAGATGTAACGAACTGATTTTGTGCTGTTCTGCTCGCTACGGAATACGTTCGGCTAGCTCAGTAGATTTTGTGCGTTCGTCTCACCAACTTTATAGTATATCGTGATCACCCGGTTACCAGTAATAACACTTGCCGTTTTCGTTCTGGGGTCTTTATTCGTGCTTAGACTTACAATGGAATTTGATTATCTAGCCGTAGTGCTGGA
********************************************************.((((....(((((...((((((.((((((((.....))))..))))..))))))....)))))............(((....))).....((((((....))))))))))........................************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 V058
head
 V052
head
 GSM1528802
follicle cells		 V120
male body		 M026
head
 V046
embryo
.........................TCGAGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 1 19 107.05 2034 1605 24 186 158 0 33 13 15
.........................TCGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 0 10 107.00 1070 851 28 61 66 31 12 11 10
.........................TCGTGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 1 15 64.20 963 851 21 39 31 0 15 4 2
..........................CGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 21 0 10 12.00 120 104 10 1 3 0 0 2 0
..........................CGAGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 21 1 20 9.00 180 163 3 9 3 0 0 1 1
.......................GGTCGGGCCCCACGTTGGG................................................................................................................................................................................................................. 19 1 11 5.36 59 0 59 0 0 0 0 0 0
..........................CGTGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 21 1 20 4.70 94 94 0 0 0 0 0 0 0
.........................TCGGGCCCGACGTTGGGCGCCA............................................................................................................................................................................................................ 22 1 10 4.60 46 46 0 0 0 0 0 0 0
.......................GGTCGTGCCCCACGTTGGG................................................................................................................................................................................................................. 19 2 20 3.40 68 0 67 0 1 0 0 0 0
........................GTCGAGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 23 1 3 3.33 10 8 2 0 0 0 0 0 0
.......................................................CCAATGATTTTGTGCTGTTCT............................................................................................................................................................................... 21 3 11 2.45 27 0 0 0 0 27 0 0 0
........................GTCGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 23 0 3 2.33 7 5 2 0 0 0 0 0 0
........................GTCGTGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 23 1 3 2.33 7 7 0 0 0 0 0 0 0
......................................TGGGCGCCAGATGTAACGAACTGAT............................................................................................................................................................................................ 25 0 20 1.60 32 0 20 0 0 11 1 0 0
.........................TCGCGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 1 10 1.60 16 7 2 2 3 0 1 1 0
......................................................................................................................................................................TAATAACACTTGCCGTTTTCGTTCT............................................................ 25 0 3 1.33 4 3 1 0 0 0 0 0 0
.........................TCGTGCCCGACGTTGGGCGCCA............................................................................................................................................................................................................ 22 2 18 1.22 22 22 0 0 0 0 0 0 0
.........................TCGGGCCCAACGTTGGGCGCCA............................................................................................................................................................................................................ 22 1 10 1.10 11 11 0 0 0 0 0 0 0
.......................GGTCGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 24 1 6 1.00 6 1 5 0 0 0 0 0 0
.................................CACGTTGGGCGCCAGATGTAACGAAC................................................................................................................................................................................................ 26 0 15 0.93 14 9 2 0 0 0 0 3 0
.........................TCGGGCCCCACGTTGGGCGCCC............................................................................................................................................................................................................ 22 1 10 0.90 9 0 1 3 4 1 0 0 0
......................GTTTCGGGCCCCACGTTGGG................................................................................................................................................................................................................. 20 1 7 0.86 6 0 6 0 0 0 0 0 0
......................GTTTCGGGCCCCACGTTGGGC................................................................................................................................................................................................................ 21 1 7 0.86 6 0 6 0 0 0 0 0 0
.......................GGTCGGGCCCCACGTTGGGC................................................................................................................................................................................................................ 20 1 11 0.82 9 0 9 0 0 0 0 0 0
.........................TCGGGCCCCACGTTGGGCGCC............................................................................................................................................................................................................. 21 0 10 0.80 8 8 0 0 0 0 0 0 0
...........................GGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 20 0 18 0.78 14 9 2 0 1 0 1 1 0
......................................................................................................................................................................................................................TTACAATGGAATTTGATTATCTAGCCG.......... 27 0 4 0.75 3 2 0 0 0 0 1 0 0
......................................................................................................................................................................................................................TTACAATGGAATGTGATTATCTAGCCG.......... 27 1 4 0.75 3 2 1 0 0 0 0 0 0
......................................................................................................................................................................TAATAACACTTGCCGTTTTCGTTCTGG.......................................................... 27 0 3 0.67 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TGTGATTATCTAGCCGTAGGGCTGGA 26 2 5 0.60 3 2 1 0 0 0 0 0 0
.........................TCGGGCCCTACGTTGGGCGCCA............................................................................................................................................................................................................ 22 1 10 0.60 6 6 0 0 0 0 0 0 0
.........................TCGAGCCCCACGTTGGGCGCCG............................................................................................................................................................................................................ 22 2 20 0.55 11 7 0 2 0 0 0 1 1
.........................TCGAGCCCTACGTTGGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.55 11 11 0 0 0 0 0 0 0
........................................................AACTGATTTTGTGCTGTTCTGCTCGC......................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0
......................GTTTCGTGCCCCACGTTGGGC................................................................................................................................................................................................................ 21 2 20 0.50 10 0 10 0 0 0 0 0 0
...........................................................TGATTTTGTGCTGTTCTGCTCGCTACG..................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TACAATGGAATGTGATTATCTAGCCGT......... 27 1 4 0.50 2 1 1 0 0 0 0 0 0
.........................TCGAGCCCCACGTTGGGCGCCC............................................................................................................................................................................................................ 22 2 20 0.50 10 0 0 6 4 0 0 0 0
....................................................................................................................TGCGTTCGTCTCACCAACTTTATAGTA............................................................................................................ 27 0 4 0.50 2 2 0 0 0 0 0 0 0
...........................................................TGATTTTGTGCTGTTCTGCTCGCTAC...................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0
......................GTTTCGTGCCCCACGTTGGG................................................................................................................................................................................................................. 20 2 20 0.50 10 0 10 0 0 0 0 0 0
.......................GGTCGTGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 24 2 8 0.50 4 0 4 0 0 0 0 0 0
.........................TCGTGCCCAACGTTGGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.45 9 9 0 0 0 0 0 0 0
.......................GGTCGAGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 24 2 9 0.44 4 0 4 0 0 0 0 0 0
.........................TCGGGCCCCACGTTGGGCGCCT............................................................................................................................................................................................................ 22 1 10 0.40 4 0 3 1 0 0 0 0 0
.......................GGTCGTGCCCCACGTTGG.................................................................................................................................................................................................................. 18 2 20 0.40 8 0 8 0 0 0 0 0 0
.........................TCGAGCCCCACGTTGGGCGCC............................................................................................................................................................................................................. 21 1 20 0.40 8 8 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TGTGATTATCTAGCCGTAGGGCTGG. 25 2 5 0.40 2 1 0 0 0 0 0 0 1
.........................TCGTGCCCCACGTTGGGCGCC............................................................................................................................................................................................................. 21 1 15 0.40 6 5 0 0 1 0 0 0 0
..........................CGGGCCCCGCGTTGGGCGCCA............................................................................................................................................................................................................ 21 1 15 0.40 6 6 0 0 0 0 0 0 0
.......................GGTCGGGCCCCACGTTGG.................................................................................................................................................................................................................. 18 1 11 0.36 4 0 4 0 0 0 0 0 0
.........................................................................................................................................................................TAACACTTGCCGTTTTCGTTCTGG.......................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0
..................GGCGGGGTCGGCCCCCACGTTGGGC................................................................................................................................................................................................................ 25 3 3 0.33 1 0 1 0 0 0 0 0 0
...............TGCCGCGGTGTCGGGCCCCACGTT.................................................................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................TGTCGAGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 24 1 3 0.33 1 1 0 0 0 0 0 0 0
......................GTCTCGGGCCCCACGTTGGGC................................................................................................................................................................................................................ 21 1 6 0.33 2 0 2 0 0 0 0 0 0
.......................CGTCGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 24 1 3 0.33 1 0 1 0 0 0 0 0 0
.....................GGAGTCGAGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 26 2 3 0.33 1 1 0 0 0 0 0 0 0
.........................TCGTGCCCTACGTTGGGCGCCA............................................................................................................................................................................................................ 22 2 15 0.33 5 5 0 0 0 0 0 0 0
........................GTCGGGCCCCACGATGGGCGCCA............................................................................................................................................................................................................ 23 1 3 0.33 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................TAATAACACTTGCCGTTTTCGTTC............................................................. 24 0 3 0.33 1 0 1 0 0 0 0 0 0
........................GTCGAGCCCCACGCTGGGCGCCA............................................................................................................................................................................................................ 23 2 3 0.33 1 1 0 0 0 0 0 0 0
.........................TCGGGCCCCACGTTGGGCGCCG............................................................................................................................................................................................................ 22 1 10 0.30 3 3 0 0 0 0 0 0 0
......................................TGGGCGCCAGATGTAACGAACTGATT........................................................................................................................................................................................... 26 0 20 0.30 6 0 0 0 0 0 3 1 2
...............................................................................................................................................................................................................................AATTTGGTTATCTAGCTGTATT...... 22 3 10 0.30 3 0 0 1 0 0 0 0 2
.....................................TTGGGCGCCAGATGTAACGAACTGATT........................................................................................................................................................................................... 27 0 20 0.30 6 6 0 0 0 0 0 0 0
.........................TCGGGCCCCACGGTGGGCGCCA............................................................................................................................................................................................................ 22 1 11 0.27 3 2 0 1 0 0 0 0 0
.........................TCGTGCCCCACGTTGGGCGCCC............................................................................................................................................................................................................ 22 2 15 0.27 4 0 2 2 0 0 0 0 0
.....................GATCTCGGGCCCCACGTTGGGCGCCT............................................................................................................................................................................................................ 26 3 4 0.25 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................GCTTAGACTTACAATGGAATGTGA..................... 24 1 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TATTCGTGCTTAGACTTACAATGGAAA......................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GGAATGTGATTATCTAGCCGTAGGGC.... 26 2 4 0.25 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................CGTGCTTAGACTTACAATGGAA.......................... 22 0 4 0.25 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTACAATGGAATTTGATTATCTAGCC........... 26 0 4 0.25 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTACAATGGAATGTGATTATCTAGCC........... 26 1 4 0.25 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................TACAATGGAATTTGATTATCTAGCCGT......... 27 0 4 0.25 1 1 0 0 0 0 0 0 0
..................................................................................................................TGTGCGTTCGTCTCACCAACTTTA................................................................................................................. 24 0 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TACAATGGAATTTGATTATCTAGCCG.......... 26 0 4 0.25 1 1 0 0 0 0 0 0 0
............................................................................................................................TCTCACCATCTTTATAGTATATCGTGA.................................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0
.........................CCGAGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.25 5 5 0 0 0 0 0 0 0
........................................................................................................................................................................................TCGTTCTGGGGTCTTTATTCGTGCTTA........................................ 27 0 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TGCTTAGACTTACAATGGAATGTGA..................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................TGTTCGTGCTTAGACTTACAATGGAATG........................ 28 2 4 0.25 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TCGTGCTTAGACTTACAATGGAATT........................ 25 0 4 0.25 1 0 1 0 0 0 0 0 0
.........................................................................................TACTTTCGGCTAGCTCAGTAGATT.......................................................................................................................................... 24 1 4 0.25 1 0 0 0 0 0 1 0 0
.......................................................................................................................................TTATAGTATATCGTGATCACCCGGT........................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................TGGGGTCTTTATTCGTGCTTAGACT.................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0
............................GGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 19 0 20 0.25 5 5 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TACAATGGAATGTGATTATCTAGCCGC......... 27 2 4 0.25 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................TATTCGTGCTTAGACTTACAATGGAA.......................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TACAATGGAATGTGATTATCTAGCCG.......... 26 1 4 0.25 1 0 0 0 0 0 1 0 0
.......................................................................................................TCAGTAGATTTTGTGCGTTCGTCT............................................................................................................................ 24 0 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TACAATGGAATTTGATTATCTAGCCGC......... 27 1 4 0.25 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................TGGAATGTGATTATCTAGCCGTAGGG..... 26 2 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TACAATGGAATGTGATTATCTAGCC........... 25 1 4 0.25 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................GAATGTGATTATCTAGCCGTAGGGC.... 25 2 4 0.25 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TAGACTTACAATGGAATGTGATTATCT............... 27 1 4 0.25 1 0 1 0 0 0 0 0 0
....................................................................................................................................................TGATCACCCGGTTACCAGTAATAACACT........................................................................... 28 0 20 0.25 5 5 0 0 0 0 0 0 0
...........................GGGCCCCACGTTGGGCGCCG............................................................................................................................................................................................................ 20 1 18 0.22 4 4 0 0 0 0 0 0 0
......................GTGTTCGGCCCCACGTTGGG................................................................................................................................................................................................................. 20 2 14 0.21 3 0 3 0 0 0 0 0 0
.......................GGTCGTGCCCCACGTTGGGC................................................................................................................................................................................................................ 20 2 20 0.20 4 0 4 0 0 0 0 0 0
.........................................................................TCTGCTCGCTACGGAATACGTTCGG......................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0 0
......................GTTTCGGGCCCCACGTTGGGCGCC............................................................................................................................................................................................................. 24 1 5 0.20 1 0 1 0 0 0 0 0 0
..............ATGCCGTGGGTTCGGGCCCCACGTTGGGC................................................................................................................................................................................................................ 29 3 5 0.20 1 0 1 0 0 0 0 0 0
.........................CCGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 1 10 0.20 2 1 0 1 0 0 0 0 0
.........................TCGAGCCCCCCGTTGGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.20 4 0 0 4 0 0 0 0 0
.........................TCGGGCCCCACGTTGGGCGCCAGGGGC....................................................................................................................................................................................................... 27 3 5 0.20 1 1 0 0 0 0 0 0 0
.........................................................................ACTGCTCGCTACGGAATACGTTCGGC........................................................................................................................................................ 26 1 5 0.20 1 0 1 0 0 0 0 0 0
..........................CGAGCCCCGCGTTGGGCGCCA............................................................................................................................................................................................................ 21 2 20 0.20 4 4 0 0 0 0 0 0 0
.........................GCGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 1 15 0.20 3 3 0 0 0 0 0 0 0
.....GCTCCGCCGATGCCGCGGTGTCGGG............................................................................................................................................................................................................................. 25 0 5 0.20 1 1 0 0 0 0 0 0 0
.........................TCGAGCCCCACGTTGGGCGCCAGGTGGA...................................................................................................................................................................................................... 28 3 5 0.20 1 1 0 0 0 0 0 0 0
.........................TCGGCCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 1 10 0.20 2 0 0 0 1 1 0 0 0
.........................TCGGGCCCCACGTCGGGCGCCA............................................................................................................................................................................................................ 22 1 11 0.18 2 0 0 0 2 0 0 0 0
.......................TGTCGGGCCCCACGTTGGGC................................................................................................................................................................................................................ 20 0 6 0.17 1 0 1 0 0 0 0 0 0
.........................TCGTGCCCCACGTTGGGCGCCT............................................................................................................................................................................................................ 22 2 18 0.17 3 2 1 0 0 0 0 0 0
........................GTCGTGCCCCACGTTGGG................................................................................................................................................................................................................. 18 1 6 0.17 1 0 1 0 0 0 0 0 0
.......................GGTCGGGCCCCACGTTGGGCGCC............................................................................................................................................................................................................. 23 1 6 0.17 1 0 1 0 0 0 0 0 0
.........................TCGGGCCCCACGTTGGGCGCCAGG.......................................................................................................................................................................................................... 24 1 6 0.17 1 1 0 0 0 0 0 0 0
.......................GGTCGGGCCCCACGTTGGGCGCCC............................................................................................................................................................................................................ 24 2 6 0.17 1 0 1 0 0 0 0 0 0
......................GTCTCGGGCCCCACGTTGGG................................................................................................................................................................................................................. 20 1 6 0.17 1 0 1 0 0 0 0 0 0
........................GTCGGGCCCCACGTTGGGCGCTA............................................................................................................................................................................................................ 23 1 6 0.17 1 1 0 0 0 0 0 0 0
.......................GGTCGGGCCCCACGTTTGGCGCCT............................................................................................................................................................................................................ 24 3 6 0.17 1 0 0 0 1 0 0 0 0
..........................CGGGCCCCACGTTGGGCG............................................................................................................................................................................................................... 18 0 13 0.15 2 0 0 0 0 0 0 2 0
......................................TGGGCGCCAGATGTAACGAACTGA............................................................................................................................................................................................. 24 0 20 0.15 3 2 0 0 0 0 0 0 1
......................................TGGGCGCCAGATGTAACGAAC................................................................................................................................................................................................ 21 0 20 0.15 3 3 0 0 0 0 0 0 0
.....................GGGGTCGTGCCCCACGTTGGGC................................................................................................................................................................................................................ 22 2 20 0.15 3 0 3 0 0 0 0 0 0
.........................TCGAGCTCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.15 3 1 0 1 1 0 0 0 0
.........................ACGAGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.15 3 3 0 0 0 0 0 0 0
..........................CGAGCCCCCCGTTGGGCGCCA............................................................................................................................................................................................................ 21 2 20 0.15 3 3 0 0 0 0 0 0 0
.....................GGGGTCGTGCCCCACGTTGGG................................................................................................................................................................................................................. 21 2 20 0.15 3 0 3 0 0 0 0 0 0
.........................TCGAGCCCCACGTTGGGCGCCAG........................................................................................................................................................................................................... 23 1 7 0.14 1 1 0 0 0 0 0 0 0
.......................GGTCGCGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 24 2 7 0.14 1 0 1 0 0 0 0 0 0
.........................TCGAGCCCCACGTTGGGCGCCAGG.......................................................................................................................................................................................................... 24 2 7 0.14 1 1 0 0 0 0 0 0 0
...................CAGGGGTCGGGCCCCACGTTGGGC................................................................................................................................................................................................................ 24 3 7 0.14 1 0 1 0 0 0 0 0 0
....................CTGCTTCGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 27 3 7 0.14 1 1 0 0 0 0 0 0 0
.......................TTTCGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 24 1 7 0.14 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TTTGTTCGTGCTTAGACTTACA................................ 22 1 7 0.14 1 1 0 0 0 0 0 0 0
.......................TTTCGTGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 24 2 14 0.14 2 1 0 0 0 0 1 0 0
....................CCAAGTCGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 27 3 7 0.14 1 1 0 0 0 0 0 0 0
......................GTTTCGGCCCCCACGTTGGGC................................................................................................................................................................................................................ 21 2 7 0.14 1 0 1 0 0 0 0 0 0
.........................TCGTGCCCCACGTTGGGCGCCAGG.......................................................................................................................................................................................................... 24 2 7 0.14 1 1 0 0 0 0 0 0 0
....................CGGACTCGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 27 2 7 0.14 1 1 0 0 0 0 0 0 0
......................GTTGCGGGCCCCACGTTGGGC................................................................................................................................................................................................................ 21 2 7 0.14 1 0 1 0 0 0 0 0 0
.................................CACGTTGGGCGCCAGATGTAACGAA................................................................................................................................................................................................. 25 0 15 0.13 2 0 2 0 0 0 0 0 0
.........................TCGTGCCCCACGTTGGGCGCCAGCG......................................................................................................................................................................................................... 25 3 8 0.13 1 1 0 0 0 0 0 0 0
.......................AGTCGAGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 24 2 8 0.13 1 1 0 0 0 0 0 0 0
......................GTTTCGGACCCCACGTTGGAC................................................................................................................................................................................................................ 21 3 8 0.13 1 0 1 0 0 0 0 0 0
......................GTTTCGGGCCCCACCTTGGGC................................................................................................................................................................................................................ 21 2 8 0.13 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................TTAGACTTACAATGGAATGTGATTATC................ 27 1 9 0.11 1 1 0 0 0 0 0 0 0
.....................GTGGTCGGGCCCCACGTTGGG................................................................................................................................................................................................................. 21 2 9 0.11 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................TATTTGATTATCTAGCTGTAC....... 21 3 9 0.11 1 0 0 1 0 0 0 0 0
..........................CGAGCCCCACGTTGGGCGCCG............................................................................................................................................................................................................ 21 2 20 0.10 2 2 0 0 0 0 0 0 0
.................................................................................................GCTAGCTCAGTAGATTTTGTGCGTT................................................................................................................................. 25 0 10 0.10 1 0 1 0 0 0 0 0 0
......................ATTTCGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 25 2 10 0.10 1 1 0 0 0 0 0 0 0
..........................CGGGCCCCACGTTGGGCGCCG............................................................................................................................................................................................................ 21 1 10 0.10 1 1 0 0 0 0 0 0 0
..........................CGGGCCCCACGTTGGGCGCCC............................................................................................................................................................................................................ 21 1 10 0.10 1 0 1 0 0 0 0 0 0
.........................TCGTGCCCCACGTTGGGCG............................................................................................................................................................................................................... 19 1 20 0.10 2 1 0 0 0 0 0 1 0
..........................CGGGCCCCACGTTGGGCGCC............................................................................................................................................................................................................. 20 0 10 0.10 1 0 1 0 0 0 0 0 0
.........................TCGGGCCCCACGTTGCGCGCCA............................................................................................................................................................................................................ 22 1 10 0.10 1 0 0 0 1 0 0 0 0
.........................TCGTGCCCCACGTTGGGCGC.............................................................................................................................................................................................................. 20 1 20 0.10 2 2 0 0 0 0 0 0 0
..........................CGTGCCCCACGCTGGGCGCCA............................................................................................................................................................................................................ 21 2 20 0.10 2 1 0 0 1 0 0 0 0
.........................TCGAGCCCCACGTTCGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.10 2 0 0 1 1 0 0 0 0
.........................TCGAGCCCCACGGTGGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.10 2 2 0 0 0 0 0 0 0
........................................GGCGCCAGATGTAACGAACTGATTTT......................................................................................................................................................................................... 26 0 20 0.10 2 1 1 0 0 0 0 0 0
.........................TCGGGCCCCACGTTGGTCGCCA............................................................................................................................................................................................................ 22 1 10 0.10 1 0 0 0 1 0 0 0 0
.........................TCGAGCCCCACGTTGGGGGCCA............................................................................................................................................................................................................ 22 2 20 0.10 2 1 1 0 0 0 0 0 0
......................................TGGGCGCCAGATGTAACGAACT............................................................................................................................................................................................... 22 0 20 0.10 2 0 2 0 0 0 0 0 0
.........................TCGAGCCCCACTTTGGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.10 2 2 0 0 0 0 0 0 0
........................................GTCGCCAGATGTAACGAACTGATTTT......................................................................................................................................................................................... 26 1 20 0.10 2 0 2 0 0 0 0 0 0
...........................GGGCCCCACGTTGGGCGC.............................................................................................................................................................................................................. 18 0 20 0.10 2 0 1 0 0 0 0 1 0
................................CCACGTTGGGCGCCAGATGTAACGAAC................................................................................................................................................................................................ 27 0 11 0.09 1 1 0 0 0 0 0 0 0
.......................CGTCGTGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 24 2 11 0.09 1 1 0 0 0 0 0 0 0
.......................TTTCGGGCCCCACGTTGGG................................................................................................................................................................................................................. 19 1 11 0.09 1 0 1 0 0 0 0 0 0
.........................TCGGGCCCCACGCTGGGCGCCA............................................................................................................................................................................................................ 22 1 11 0.09 1 0 0 0 1 0 0 0 0
.........................ACGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 1 11 0.09 1 1 0 0 0 0 0 0 0
.........................CCGGGCCGCACGTTGGGGGCCA............................................................................................................................................................................................................ 22 3 11 0.09 1 0 0 1 0 0 0 0 0
.........................ACGGGCCCCACGTTGGGCGCCC............................................................................................................................................................................................................ 22 2 11 0.09 1 0 1 0 0 0 0 0 0
.......................TTTCGGGCCCCACGTTGGGC................................................................................................................................................................................................................ 20 1 11 0.09 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................TGAGGTCTTTTTTAGTGCTTA........................................ 21 3 11 0.09 1 0 0 0 0 0 0 0 1
.........................TCGGGCCCCACGCTGGGCGCCT............................................................................................................................................................................................................ 22 2 11 0.09 1 0 0 1 0 0 0 0 0
.......................GGTCGGGCCCCACGTTGGGA................................................................................................................................................................................................................ 20 2 11 0.09 1 0 1 0 0 0 0 0 0
.......................GGTCGGGCCCAACGTTGGG................................................................................................................................................................................................................. 19 2 12 0.08 1 0 1 0 0 0 0 0 0
.....................................................ACGGACTGAGTTTGTGC..................................................................................................................................................................................... 17 2 12 0.08 1 0 0 1 0 0 0 0 0
.........................TCGGCCCCCACGTGGGGCGCCC............................................................................................................................................................................................................ 22 3 12 0.08 1 0 0 1 0 0 0 0 0
..........................CGGGCCCCCCGTTGGGCGCCA............................................................................................................................................................................................................ 21 1 12 0.08 1 1 0 0 0 0 0 0 0
.......................GGTCGGGCCCCACGTTGGC................................................................................................................................................................................................................. 19 2 12 0.08 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTGATTATCTATCCGGA........ 17 2 13 0.08 1 0 0 1 0 0 0 0 0
.........................TCGGGCCCCACGTTGGGCG............................................................................................................................................................................................................... 19 0 13 0.08 1 1 0 0 0 0 0 0 0
..........................CGGTCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 21 1 13 0.08 1 0 1 0 0 0 0 0 0
..........................CGCGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 21 1 13 0.08 1 0 1 0 0 0 0 0 0
.......................GGTCGGGCCCCAAGTTGGG................................................................................................................................................................................................................. 19 2 13 0.08 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................TTCGTTCTGGGATCTTTATTCGTGCT.......................................... 26 1 13 0.08 1 1 0 0 0 0 0 0 0
................................CCACGTTGGGCGCCAGATGTAACG................................................................................................................................................................................................... 24 0 14 0.07 1 0 1 0 0 0 0 0 0
.......................GGTCGGGCCCCCCGTTGGGC................................................................................................................................................................................................................ 20 2 14 0.07 1 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................................................ATGGAATGTGGTTATCTTGCC........... 21 3 14 0.07 1 0 0 1 0 0 0 0 0
.........................GCGGGCCCCACGTTGGGCGCCG............................................................................................................................................................................................................ 22 2 15 0.07 1 0 0 1 0 0 0 0 0
.................................CACGTTGGCCGCCAGATGTAACGAAC................................................................................................................................................................................................ 26 1 15 0.07 1 1 0 0 0 0 0 0 0
................................GCACGTTGGGCGCCAGATGTAACGAAC................................................................................................................................................................................................ 27 1 15 0.07 1 0 1 0 0 0 0 0 0
..................................ACGTTGGGCGCCAGATGTAACGAAC................................................................................................................................................................................................ 25 0 15 0.07 1 1 0 0 0 0 0 0 0
.................................CACGTTGGGCGCCAGATGTAACGAACT............................................................................................................................................................................................... 27 0 15 0.07 1 1 0 0 0 0 0 0 0
.........................TCGTGCACCACGTTGCGCGCCA............................................................................................................................................................................................................ 22 3 15 0.07 1 0 0 1 0 0 0 0 0
.........................TCGTGCCCCACGTTGGACGCCA............................................................................................................................................................................................................ 22 2 15 0.07 1 1 0 0 0 0 0 0 0
.................................CACGTTGGTCGCCAGATGTAACGAA................................................................................................................................................................................................. 25 1 15 0.07 1 1 0 0 0 0 0 0 0
.........................TCGGGCCCCACGTTGGGC................................................................................................................................................................................................................ 18 0 15 0.07 1 0 0 0 0 0 0 1 0
.................................CACGTTGGGCGCCAGATGTAACGAACA............................................................................................................................................................................................... 27 1 15 0.07 1 1 0 0 0 0 0 0 0
......................TAGTCGAGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 25 3 15 0.07 1 1 0 0 0 0 0 0 0
.........................TCGTGCCCCAAGTTGGGCGCCC............................................................................................................................................................................................................ 22 3 15 0.07 1 0 0 0 0 0 0 0 1
.........................TCGTGCCCCACGTTGGGCGCCG............................................................................................................................................................................................................ 22 2 15 0.07 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GAACTTGATTATTTAGCCCT......... 20 3 16 0.06 1 1 0 0 0 0 0 0 0
.........................TCGTGCCCCACGTTGGGCGTCA............................................................................................................................................................................................................ 22 2 16 0.06 1 0 1 0 0 0 0 0 0
.........................TCGCGCCCCGCGTTGGGCGCCT............................................................................................................................................................................................................ 22 3 16 0.06 1 0 0 1 0 0 0 0 0
.........................TCGTGCCCCACGTCGGGCGCCA............................................................................................................................................................................................................ 22 2 16 0.06 1 0 0 1 0 0 0 0 0
.........................TCGGGCCCCCCGTTTGTCGCCA............................................................................................................................................................................................................ 22 3 16 0.06 1 0 0 1 0 0 0 0 0
...................................CGTTGGGCGCCAGATGTAACGAACT............................................................................................................................................................................................... 25 0 16 0.06 1 1 0 0 0 0 0 0 0
.........................TAGGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 1 16 0.06 1 1 0 0 0 0 0 0 0
...................................................................................................TAGCTCAGTAGATTTTGTGCGTTCT............................................................................................................................... 25 1 17 0.06 1 1 0 0 0 0 0 0 0
.........................TCGTGCCACACGTTGGGAGCCA............................................................................................................................................................................................................ 22 3 18 0.06 1 0 0 1 0 0 0 0 0
...........................GGGCCCCAGGTTGGGCGCCA............................................................................................................................................................................................................ 20 1 18 0.06 1 1 0 0 0 0 0 0 0
.................................CACGTTGGGCGCCAGTTGTAACGATC................................................................................................................................................................................................ 26 2 18 0.06 1 0 0 0 0 0 0 1 0
.........................TCCGGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 1 18 0.06 1 0 0 1 0 0 0 0 0
.......................GGTCGGGCCCCACTTTGG.................................................................................................................................................................................................................. 18 2 18 0.06 1 0 1 0 0 0 0 0 0
.........................TCGAGCCCCACGTTGGTCGCCA............................................................................................................................................................................................................ 22 2 19 0.05 1 0 0 0 1 0 0 0 0
.........................TCGAGCCCCACGTGGGGCGCCA............................................................................................................................................................................................................ 22 2 19 0.05 1 0 0 1 0 0 0 0 0
.........................TCGAGCCCCACGTTGCGCGCCA............................................................................................................................................................................................................ 22 2 19 0.05 1 0 0 1 0 0 0 0 0
...........................GGTCCCCACGTTGGGCG............................................................................................................................................................................................................... 17 1 20 0.05 1 0 0 1 0 0 0 0 0
.........................TCGATCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.05 1 1 0 0 0 0 0 0 0
...........................GGGCCCCACGTTGGGCG............................................................................................................................................................................................................... 17 0 20 0.05 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................GATCACCCGGTTACCAGTAATAACAC............................................................................ 26 0 20 0.05 1 0 1 0 0 0 0 0 0
.....................GGTTTCGTGCCCCACGTTGGG................................................................................................................................................................................................................. 21 2 20 0.05 1 0 1 0 0 0 0 0 0
......................................TCGGCGCCAGATGTAACGAACTGATT........................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0
..........................CGAGCCCCACGTTGGGCGCCC............................................................................................................................................................................................................ 21 2 20 0.05 1 0 1 0 0 0 0 0 0
.........................TCGACCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.05 1 0 0 1 0 0 0 0 0
......................GTTCCGTGCCCCACGTTGGGC................................................................................................................................................................................................................ 21 3 20 0.05 1 0 1 0 0 0 0 0 0
..........................CGTGCCCCGCGTTGGGCGCCA............................................................................................................................................................................................................ 21 2 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................TCACCCGGTTACCAGTAATAACACTTGC........................................................................ 28 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................TCGAGCCCCACGTCGGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.05 1 0 0 0 1 0 0 0 0
...............................CCCACGTGGGGCGCCA............................................................................................................................................................................................................ 16 1 20 0.05 1 0 0 0 0 1 0 0 0
......................GGGTCGTGCCCCACGTTGGGCG............................................................................................................................................................................................................... 22 2 20 0.05 1 0 1 0 0 0 0 0 0
.........................TCGAGCCCCACTTCGGGCGCCA............................................................................................................................................................................................................ 22 3 20 0.05 1 0 0 0 1 0 0 0 0
......................GTCTCGAGCCCCACGTTGGG................................................................................................................................................................................................................. 20 2 20 0.05 1 0 1 0 0 0 0 0 0
....................................GTTGGGCGCCAGATGTAACGAACTGAT............................................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0 0 0
..........................CGAGCCCCACGTTGGGCGCC............................................................................................................................................................................................................. 20 1 20 0.05 1 1 0 0 0 0 0 0 0
.......................GGTCGTGCCCAACGTTGGG................................................................................................................................................................................................................. 19 3 20 0.05 1 0 1 0 0 0 0 0 0
..........................................CGCCAGATGTAACGAACTGATT........................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................TCACCCGGTTACCAGTAATAACACT........................................................................... 25 0 20 0.05 1 0 1 0 0 0 0 0 0
.........................TCGAGCCCCACGCTGGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.05 1 0 0 1 0 0 0 0 0
.........................TCGAGCCCCACGTTGGTCCCCA............................................................................................................................................................................................................ 22 3 20 0.05 1 0 0 1 0 0 0 0 0
.......................TGTCTTGCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 24 2 20 0.05 1 0 1 0 0 0 0 0 0
..........................CGATCCCCACGTTGGGCGCC............................................................................................................................................................................................................. 20 2 20 0.05 1 0 1 0 0 0 0 0 0
.........................TCGAGCCCCACATTGGGCGCCA............................................................................................................................................................................................................ 22 2 20 0.05 1 0 0 0 1 0 0 0 0
.....................GTGGTCGTGCCCCACGTTGGG................................................................................................................................................................................................................. 21 3 20 0.05 1 0 1 0 0 0 0 0 0
......................GGGTCGTGCCCCACGTTGGG................................................................................................................................................................................................................. 20 2 20 0.05 1 1 0 0 0 0 0 0 0
.......................................GGGCGCCAGATGTAACGAACTGATT........................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0 0 0
......................................TGGGCGCCAGATGTAACGAACTGATTT.......................................................................................................................................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 1
..........................CGTGCCCCACGTTGGGCGCCT............................................................................................................................................................................................................ 21 2 20 0.05 1 0 0 0 1 0 0 0 0
...........................................................................TGCTCGCTACGGAATACG.............................................................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0
..........................CGAGCCCCACGTTGGTCGCCA............................................................................................................................................................................................................ 21 2 20 0.05 1 0 0 1 0 0 0 0 0
......................................TGGGCGCCAGATGTAACGAACTG.............................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................GGGCGCCAGATGTAACGAACTGAT............................................................................................................................................................................................ 24 0 20 0.05 1 0 1 0 0 0 0 0 0
..........................CGTGCCCCACGTTGGGCGCCC............................................................................................................................................................................................................ 21 2 20 0.05 1 0 1 0 0 0 0 0 0
..........................CGAGCCCCACGCTCGGCGCCA............................................................................................................................................................................................................ 21 3 20 0.05 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................ACCCGGTTACCAGTAATAACACT........................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
......................................TGCTCGCCAGATGTAACGAACTGATT........................................................................................................................................................................................... 26 2 20 0.05 1 0 1 0 0 0 0 0 0
.....................GGGGTCGTGCCCCACGTTGGAC................................................................................................................................................................................................................ 22 3 20 0.05 1 0 1 0 0 0 0 0 0
...........................GGCCCCCACGTTGGGCGCCA............................................................................................................................................................................................................ 20 1 20 0.05 1 0 1 0 0 0 0 0 0
.......................................................................GTTCTGCTCGCTACGGAATACGTGC........................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0
.........................TCGAGCCCCACGTTGCGCGCCC............................................................................................................................................................................................................ 22 3 20 0.05 1 0 0 1 0 0 0 0 0
.........................ACGAGCCCCACGTTGGCCGCCA............................................................................................................................................................................................................ 22 3 20 0.05 1 0 0 1 0 0 0 0 0
......................GTTTCGTGCCCCACGTTGGAC................................................................................................................................................................................................................ 21 3 20 0.05 1 0 1 0 0 0 0 0 0
.....................................TTGGGCGCCAGATGTAACGAACTGATA........................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................GTTCTGCTCGCTACGGAATACGTGCGGC........................................................................................................................................................ 28 1 20 0.05 1 0 1 0 0 0 0 0 0
.......................GGTCGTGCCCCACGTTAGGC................................................................................................................................................................................................................ 20 3 20 0.05 1 0 1 0 0 0 0 0 0
.......................TTTCGTGCCCCACGTTGGGC................................................................................................................................................................................................................ 20 2 20 0.05 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................GCTTTCAATGGAATTAGAT.................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0
.........................TCGATCCCCACGTTGGGAGCCA............................................................................................................................................................................................................ 22 3 20 0.05 1 0 0 0 1 0 0 0 0
.........................TCGAGCCCCACGTGGGGCGCCC............................................................................................................................................................................................................ 22 3 20 0.05 1 0 0 1 0 0 0 0 0
..........................................CGCCAGATGTAACGAACTGA............................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

GAGGTCGAGGCGGCTACGGCGCCACAGCCCGGGGTGCAACCCGCGGTCTACATTGCTTGACTAAAACACGACAAGACGAGCGATGCCTTATGCAAGCCGATCGAGTCATCTAAAACACGCAAGCAGAGTGGTTGAAATATCATATAGCACTAGTGGGCCAATGGTCATTATTGTGAACGGCAAAAGCAAGACCCCAGAAATAAGCACGAATCTGAATGTTACCTTAAACTAATAGATCGGCATCACGACCT
************************************************************.((((....(((((...((((((.((((((((.....))))..))))..))))))....)))))............(((....))).....((((((....))))))))))........................******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 GSM1528802
follicle cells		 V058
head
 V120
male body
.....................................................................................................CGAGTCATCTAAAACACGCAAGCAG............................................................................................................................. 25 0 12 1.75 21 14 7 0 0 0
....................................................................................................TCGAGTCATCTAAAACACG.................................................................................................................................... 19 0 17 1.06 18 0 0 18 0 0
......................................................................................................................................................TAGTGGGCCAATGGTCATTATTGTGA........................................................................... 26 0 20 0.95 19 0 0 19 0 0
........................................................................AAGACGAGCGATGCCTTATGCAAGCCG........................................................................................................................................................ 27 0 4 0.75 3 0 0 3 0 0
.......................................................................................................................................................................................................ACAAGCACGAATCTGAATGTTACCT........................... 25 1 4 0.75 3 3 0 0 0 0
......................................................................................................................................................................................................AACAAGCACGAATCTGAATGTTACCTT.......................... 27 1 4 0.50 2 0 2 0 0 0
..................................................................CACGACAAGACGAGCGATGCCTTATG............................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
...........................................CGGTCTACATTGCTTGACTAAAACAC...................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................................................CTGAATGTTACCTTACACTAATAGAT.............. 26 1 5 0.40 2 1 1 0 0 0
.................................................................................................CGATCGAGTCATCTAAAACACGCAAG................................................................................................................................ 26 0 10 0.40 4 1 3 0 0 0
......GAGGCGGCTACGGCGCCACAGCCCGGG.......................................................................................................................................................................................................................... 27 0 3 0.33 1 1 0 0 0 0
.................................................................................................................................................................................CGGCAAAAGCAAGACCCCAGAAAT.................................................. 24 0 3 0.33 1 0 1 0 0 0
....................................................................................................TCGAGTCATCTAAAACACGCAAGCAG............................................................................................................................. 26 0 12 0.33 4 3 1 0 0 0
.................................................................................................................................................................................................CCAGAAACAAGCACGAATCTGAATGT................................ 26 1 6 0.33 2 0 2 0 0 0
....................................CAACCCGCGGTCTACATTGCTTGACT............................................................................................................................................................................................. 26 0 20 0.30 6 0 0 6 0 0
..........................................................................................................................................................................................................................TTACCTTACACTAATAGATCGGCATCCC..... 28 2 4 0.25 1 1 0 0 0 0
.......................................................................................................................................................................................................ACAAGCACGAATCTGAATGTTACCTT.......................... 26 1 4 0.25 1 1 0 0 0 0
........................................................................AAGACGAGCGCTGCCTTATGCAAGCCG........................................................................................................................................................ 27 1 4 0.25 1 0 0 1 0 0
...........................................................................................................................................................................................................GCACGAATCTGAATGTTACCTTACACTA.................... 28 1 4 0.25 1 1 0 0 0 0
.......................................................................................................................................................................................................ACAAGCACGAATCTGAATGTTACCTTAC........................ 28 2 4 0.25 1 1 0 0 0 0
...................................................................................TGCCTTATGCAAGCCGATCGAGTCATCT............................................................................................................................................ 28 0 4 0.25 1 1 0 0 0 0
........................................................................................................................................................................................................CAAGCACGAATCTGAATGTTACCT........................... 24 1 4 0.25 1 1 0 0 0 0
...........................................................................................................................................................................................................GCACGAATCTGAATGTTACCTTACACT..................... 27 1 4 0.25 1 1 0 0 0 0
...................................................................................................................................................................................................AGAAACAAGCACGAATCTGAAGGTTACCT........................... 29 2 4 0.25 1 0 0 1 0 0
......................................................................................................................................................................................................AACAAGCACGAATCTGAATGTTACCT........................... 26 1 4 0.25 1 0 1 0 0 0
............................................................................................................................................................................................................CACGAATCTGAATGTTACCT........................... 20 0 4 0.25 1 0 1 0 0 0
.........................................................................................................................................................................................................AAGCACGAATCTGAATGTTACCTT.......................... 24 0 4 0.25 1 1 0 0 0 0
..........................................................................................................................................................................................................AGCACGAATCTGAATGTTACCTT.......................... 23 0 4 0.25 1 1 0 0 0 0
.................................................................................................................................GGTTGAAATATCATATAGCACTAG.................................................................................................. 24 0 4 0.25 1 1 0 0 0 0
...............................................................................................GCCGATCGAGTCATCTAAAACACGCAA................................................................................................................................. 27 0 10 0.20 2 2 0 0 0 0
................................................................................................................................................................................................................................TACACTAATAGATCGGCATCCCGACCT 27 2 5 0.20 1 1 0 0 0 0
..........................ATCCGGGGTGCAACCCGCGGTCTACAT...................................................................................................................................................................................................... 27 2 5 0.20 1 1 0 0 0 0
.................................................................................................................................................AGCACTAGTGGGCCAATGGTCATTAT................................................................................ 26 0 5 0.20 1 1 0 0 0 0
.................................................................................................................................................................................................................................ACACTAATAGATCGGCATCCCGACCT 26 2 5 0.20 1 0 1 0 0 0
...................................................................................................ATCGAGTCATCTAAAACACGCAAGCAG............................................................................................................................. 27 0 11 0.18 2 2 0 0 0 0
.................................................................................................................................................................................................CCAGAAACAAGCACGAATCTGAATGTT............................... 27 1 6 0.17 1 0 1 0 0 0
......................CACACCCCGGGGTGCAACCCGCGGTCCG......................................................................................................................................................................................................... 28 3 6 0.17 1 1 0 0 0 0
................................................................................................................................................................................................CCCAGAAACAAGCACGAATCTGAATG................................. 26 1 6 0.17 1 1 0 0 0 0
.................................................................................................................................................................................................CCAGAAACAAGCACGAATCTGAATTT................................ 26 2 7 0.14 1 0 1 0 0 0
...................................................................................................................................................................................................AGAAACAAGCACGAATCTGAATGT................................ 24 1 7 0.14 1 1 0 0 0 0
..........................GGGCGGGGTGCAACCCGCGGTCTACA....................................................................................................................................................................................................... 26 2 8 0.13 1 1 0 0 0 0
.................................................................................................CGATCGAGTCATCTAAAACACGCAAGC............................................................................................................................... 27 0 9 0.11 1 1 0 0 0 0
...............................................................................................................................................................................................................GAATCTGAATGTTACCTTACACTAATAG................ 28 1 9 0.11 1 1 0 0 0 0
..................................................................................................GATCGAGTCATCTAAAACACGCAAGC............................................................................................................................... 26 0 9 0.11 1 1 0 0 0 0
...................................................................................................................................................................................................................CTGAATGTTACCTTACACTAATAG................ 24 1 10 0.10 1 0 0 0 0 1
................................................................................................CCGATCGAGTCATCTAAAACACGCAA................................................................................................................................. 26 0 10 0.10 1 1 0 0 0 0
.................................................................................................CGATCGAGTCATCTAAAACACGCAA................................................................................................................................. 25 0 10 0.10 1 1 0 0 0 0
...................................GCAACCCGCGGTCTACATGGCTTGACT............................................................................................................................................................................................. 27 1 12 0.08 1 1 0 0 0 0
......................................................................................................GAGTCATCTAAAACACGCAAGCAG............................................................................................................................. 24 0 13 0.08 1 1 0 0 0 0
....................................................................................GCCTTTTGCTAGCCGATC..................................................................................................................................................... 18 2 13 0.08 1 0 0 0 1 0
.....................................................................................................CGAGTCATCTAAAACACGCAAGCGG............................................................................................................................. 25 1 16 0.06 1 0 1 0 0 0
.....................................................................................................CGAGTCATCTAAAACACCCAAGCAG............................................................................................................................. 25 1 16 0.06 1 0 1 0 0 0
...................................GCAACCCGCGGTCTACGTTGCTTGA............................................................................................................................................................................................... 25 1 16 0.06 1 1 0 0 0 0
................................................................................................CCGATCGAGTCATCTAAAACAC..................................................................................................................................... 22 0 16 0.06 1 1 0 0 0 0
...................................................................................................................CTCGGAAGTAGAGTGGTTG..................................................................................................................... 19 3 17 0.06 1 1 0 0 0 0
.......................................CCCGCGGCCTACATTGCTTGACTAAAA......................................................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................CTAGTGGGCCAATGGTCATTAT................................................................................ 22 0 20 0.05 1 1 0 0 0 0
....................................................TTGCGTGCCTCAAACACGA.................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0
....................................CAACCCGCGGTCTACATTGCGT................................................................................................................................................................................................. 22 1 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................................................................CGAAAGTTACCTTAATCTAA................... 20 3 20 0.05 1 1 0 0 0 0
.........................................CGCGGTCTACATTGCTTGAC.............................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................CACTAGTGGGCCAATGGTCATTA................................................................................. 23 0 20 0.05 1 0 1 0 0 0
........................................CCGCGGTCTACATTGCTTGACTAAA.......................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3L:23459612-23459862 + dya_867 CTCCAGCTCCGC-CGATGCCG--------C-GGTGTCGGGCCCCACG--TTGGGCGCCAGATGTAACGAACTGATTTTGTGCT--GT--T--CTGCTCGCTACGG--AATACGT----------TCGGCTAGC-TCAGTAGATTTTGTGCGTTCGTC-TCACCAACTTTATAGTA-TATCGTGATCACCCGGTT-ACCA---GTAATA-----A---CACTTG---------CC-GT-TTTC-GTTC------------------------------------TGGGGTCTTTATTCG------------------TGCTTAGACTTACAATGGAATTTGATT-----------ATCT--------AG-CCGTAGT-----G--CTGG--------------------A
droEre2 scaffold_4845:2090686-2090899 + -------------------------------------------------TTGGACGCCACATGTAACGAACTGATTTTT-GTT--GG--T--CTGCTCGCTACGC--GGTACTT----------GCAGCTAGC-TCAAAAT-------ATGTTCTTC-TCACCAAATTTATATT--AAACTTGATCACCCCATT-ACCA---GTAA-----------CACTT--------AGCA-GT-TTTTGTTTC---C---------------------------------TTGATCTTTATTTG-------------------TCTCTT-TTTACAATTTGGTTTGACTCTCCATTG--------TGGGTTTCA-CCTCCGT-----C--GTGG-------------------AA
droSec2 scaffold_8:3584564-3584784 + C----------------------------------------CCCACG--TTGGGCGCCAGATATGACGAACTGATTTTG-ATT--GG--T--CTGCTCGCTACGA--GATACGT----------GCGGCTAGC-TCAGAGGATTTTGTGTGTTCGTC-CCACCAAATTTATATC--AATCGTGATCACCCGGTT-A----------GA-----A---CACTA--------AGTT-GT-TCTTATGTC---C---------------------------------TTGATCTTTATTA---------------------TTCGC-TTTACACTGCAACTCGATCTCCCGTGG--------TAGGTTTCT-CCTCAGT-----A--GTGG--------------------A
droSim2 node_86489:1445-1632 - -------------------------------------------------------------TGTAACGAACTGATTTTG--TT--TG--T--CTGCTCGCTACGG--AATACGT----------GCGGCTAGC-TCAGTAGAGTTTGTGCGTTCGTC-CCACCAAATTTATAGAA-TAACGTGATCACCCGGTT-ACCA---GTAATA-----A---CACTCG---------CA-G--TTTC-GTTC------------------------------------TCGGGTCTTTATTTG------------------AGCTCAG-TTTACAATGTACTTCAATTGTCCGG--------------------A-------------------------------------CG
dm3 chrU:129687-129877 + ------------------------------------------------------------ATGTAACAAACCGATTTAA--TT--GG--T--CTGCTCGCTACAA--GATACGC----------GAGGCTAGC-TCAGAAATTTTCAAGTGTTCGTC-CCACCAAATTTATAGA--AAACGTCATCACCCGGTT-ACCA---GTATCA-----A---CAATT--------AGCA-GT-TCTC-GTTT------------------------------------CATTTTTTTCATTTT------------------GGCTCGC-TTGCCACCTAAATTTGATCTCCCGT------------------------AG--------------------------------TG
droEug1 scf7180000409539:3123-3145 + GAATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--------GA-TCGTAGG-----G--CTGC--------------------A
droBia1 scf7180000301207:26966-27202 - TTCCCACTCTGT-TGATGTAGC-TTTCAC-CGCTG-GGACAATCACGTTTTGGCCGCCAGATGTAACGAACTGATTTGT--TTGCAT--T--CTGCTCGTTACGA--TATTTGT----------GCGGCTAGC-TCAGTAGATTGTGTGTGTTCGTC-CCACAAAATTTATAT---AAACGTGACCGCCCAGTAGTTCA---GTGAGA-----A---AGCA--CAGAATTCACG-G--TTTC-GTAG------------------------------------TGGG-------------------------------------TTTATTGCGGG-T---A-----------TAATTAC-----------------ATTCGG--CT---------------------TT
droTak1 scf7180000412469:24124-24326 - -------------------------------------------------TTGGGCGCCAGATGTAACGAACTGATTTTT--AC--GG--T--TTGCTCGCTACGA--AGATCGT----------GCGGCTAGC-TCAGTAGA-TTTGTGTGTTCGTC-CCACCAAATTTATAT---AAACGTGACCGCCCGGTT-AACA---GTAA-A-----A---CATTT-CAGAA----------TTAA-GTTCAAGGAGGC-GTTTATTTACGGC------------------------------------------------TCTGGT-TTTACAATGAT-T-----------------ATTG--------TG-A-CTCGT-----G--CTG---------------------A
droEle1 scf7180000489042:2685-2992 - CCCCATTTCTGTTTGATGCTGAATTTCAC-TGTCA-GGAAAATCACGTTTTGGGCGCCAGATGTAACGAACAGATTTTC--TTGGCTTAT--CCGCTCGCTACGA--ATGTCGT----------GCGGCTAGC-TCAGAAGA-TGTAAGTGTTCGTC-CCACCAAATTTATAT---AAACGTGATCGCCCTATTGATCA---GAGAAA-----A---CGCA--CAGAC--AGAT-TGGGAATATACG---AAGATCTTTTATTTGCCGACTTGACCCTCGGCCGGGGTT-----------------------------TTGTA-TTGACAATGC----------TCCGTCG--------TCGGCTCCTAT-----C-----CACGTTGAACGTCTCGCTGGAGTGTGAT
droRho1 scf7180000769026:7409-7613 - G-------------------------------------GGCCCCACG--TTGGGTGCCAGATGTAACGAACTGTTTTTTTTAT--GT--T--TTGCTCGCTACGA--ATTTCGT----------GCGGCTAGC-TCAGTAGAATTTGTGCGTTCGTC-CCACCAAATTTATATT--AAACGTGACCGCCCGGTT-AACA---GTAACA-----A---AACTT-CAGAA----------TTCA-GTAA-AGGAGGC-GTTTATTTACG--------------------------------------------------GCTCTGGTTGACAAT--------------------------------------------ATTTGA--AT---------------------AT
droFic1 scf7180000448751:7086-7321 + TCCCATCTTTGC-TGTTTCC---ATTCACCTGTTA-CGACAATCACG--TTGGGCGCCATATGTAACGAACTGTTTTTG-CTTACTT--TTTGTTCTCGTTACTG--AAT-TGT----------GCGGCTAGC-TCAGCAATAGTTATATGTCCGTC-CCACCAAATTTATAT----GTTGTGATTGCCCAA----CCA---GTGAAAAGATAA---CAACTT---------TG-TT-TCTC-GTTT------------------------------------CACAA----------CTTATTTATTCG------ATCTCTGAATCTCAAT--------------------------------------------ATTTG--------------------------AT
droKik1 scf7180000301528:3480-3522 + TTGGATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAATTGGAAGTTATT-----------ATAC--------TG-CCGTAGT-----G--TCGG--------------------A
droAna3 scaffold_13339:1523920-1524151 + GTCGTG--------------------------GGTTCGAGTCCCACG--TTGGGCGCCAGGTGTAACGAACTGTTTTGC-TAT--GT--T--TTGCTGGCAATAA--ACGC--C----------GCGGCTAGC-TCAC-AGAGGTTGAGGGTACGTT-CCACCGAATTTATAGATTCGACGTGATTGCCCGA-G-CCCA---GAAATA-----ACACGGTATT--------GCT-TC-TTTTCAAAT--------------------------AAATCCC---------CTTTATT-G------------------TAATTAA-TTTACAAAGGAATAAA----------GAGAATCT--------CA-CCG---------G--CTG--------------------TC
droBip1 scf7180000396091:8592-8815 - CTCCAC-G---------------GGCCACGCGCTG-T-GGCCCCACG--TTGGGCGCCAGTTGTAACGAACTGTTTTGT--CTG-CT--T--CCGCTCGCCACAA--TATG-CC----------GCGGCTAGC-TCAT-AGAGTCTGCGGGTTAGTT-CCATCGAATTTATAGTT-CGACGCGCTTGCCCGA-G-CCCA---GAAATA-----ATA-CAAAT--------AGCT-TG-TATTTTATC---CAGTCTCTTTATTTGCTGC--------TCC--------------------------------------TTCTA-TTTACAATAATAT----------------------------------------------------------------------TT
dp5 Unknown_group_335:8783-9012 - GTCCTACT---------------ATTCATC-GTTG-TAGGCCCCACA--TTGGGCGCGAGTTGTAACGGACCTACTTTT--TG--G---------GCCGTTT--G--AGTTTGC----------TGGGCTCGC-TCAGCGGT--CGGCAGATTCGTT-GCAACGTATTTTTATT------GTTGCCCCCCAACG-ACAA---ATAATA-----A---AACCTT----------------CTTTAATC-------------------------TAATTTCG---------CTTTATTCG--TAGTTA----------TATTAGGACTTATGGCTAGATATGA-----------CAATTT--------TA-C-TTAGC-----C--ACG---------------------G
droPer2 scaffold_28:49297-49469 - G--------------------------------------GCCCCACG--TTGGGCGCCAGTTGTAACGAACCTGCTTTT--TG----------GGCTCGCTT--G--AGTTTGC----------TGGGCTTGC-TCAGCGGT--CGGCAGATTCGCA-GCAACGTATTTTTATT------GTTGCC-CCCAACG-ACAACAAATGATA-----A---GACTTT---------CCTTT-TCTTTACTT-------------------------GAATTTCG---------CTTTA------------------------------TTCGCAA----------------------------------------------------------------------------TT
droWil2 scf2_1100000004925:73271-73366 - -------------------------------------------CACG--TTGGGCGCCAGATGTAACGATCCTTTCTCG--TC--C-------------CTT--TGGATATTTCTGCTATCTCTTGGG------------------CCAGGTTCGGC-ACAACAAAATTTATTT------TGTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13050:2763779-2763800 + TCG-----------------------------------GACCCCACG--TTGGGCGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6541:2420128-2420314 + G-------------------------------------GGCCCCACG--TTGGGCGCCAGTTGTAACGAACCTTCGG----TT--TA--T-----CCCGAG------TCTAAGC----------TGGGCTAGTTTCAGCTGA--CTGTGGATTCGTTGCCAACAAATTTATTTG------TTGAAGCCCCTGCG-ATAA---TTAATT-----A---GTCTTG---------TG-GT-TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTATATTTTCTTAAATA-------AAT--------------------------------------------ATGC----AA---------------------TG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CTCCAGCTCCGC-CGATGCCG--------C-GGTGTCGGGCCCCACG--TTGGGCGCCAGATGTAACGAACTGATTTTGTGCT--GT--T--CTGCTCGCTACGG--AATACGT----------TCGGCTAGC-TCAGTAGATTTTGTGCGTTCGTC-TCACCAACTTTATAGTA-TATCGTGATCACCCGGTT-ACCA---GTAATA-----A---CACTTG---------CC-GT-TTTC-GTTC------------------------------------TGGGGTCTTTATTCG------------------TGCTTAGACTTACAATGGAATTTGATT-----------ATCT--------AG-CCGTAGT-----G--CTGG--------------------ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................TCGGGCCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................2210107.00107011851281066611200031
....................................CGGGCCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................211012.0012021041003100000
..................................GTCGGGCCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................2332.33705200000000
..................................................TGGGCGCCAGATGTAACGAACTGAT..............................................................................................................................................................................................................................................................................................................................................25201.60320020000100011
...........................................................................................................................................................................................................TAATA-----A---CACTTG---------CC-GT-TTTC-GTTC------------------------------------T.............................................................................................................................2531.33403100000000
...........................................CACG--TTGGGCGCCAGATGTAACGAAC..................................................................................................................................................................................................................................................................................................................................................26150.931439200000000
...................................TCGGGCCCCACG--TTGGGCGCCC..............................................................................................................................................................................................................................................................................................................................................................22100.90900104300001
...................................TCGGGCCCCACG--TTGGGCGCC...............................................................................................................................................................................................................................................................................................................................................................21100.80808000000000
.....................................GGGCCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................20180.781419201010000
.....................................................................................................................................................................................................................................................................................................................................TTACAATGGAATTTGATT-----------ATCT--------AG-CCG.....................................2740.75302000010000
...........................................................................................................................................................................................................TAATA-----A---CACTTG---------CC-GT-TTTC-GTTC------------------------------------TGG...........................................................................................................................2730.67202000000000
....................................................................AACTGATTTTGTGCT--GT--T--CTGCTCGC.....................................................................................................................................................................................................................................................................................................................2620.50101000000000
.......................................................................TGATTTTGTGCT--GT--T--CTGCTCGCTACG.................................................................................................................................................................................................................................................................................................................2720.50101000000000
...................................................................................................................................................TGCGTTCGTC-TCACCAACTTTATAGTA-.........................................................................................................................................................................................................................................2740.50202000000000
.......................................................................TGATTTTGTGCT--GT--T--CTGCTCGCTAC..................................................................................................................................................................................................................................................................................................................2620.50101000000000
...................................TCGGGCCCCACG--TTGGGCGCCT..............................................................................................................................................................................................................................................................................................................................................................22100.40400300100000
..............................................................................................................................................................................................................TA-----A---CACTTG---------CC-GT-TTTC-GTTC------------------------------------TGG...........................................................................................................................2430.33101000000000
................TGCCG--------C-GGTGTCGGGCCCCACG--TT......................................................................................................................................................................................................................................................................................................................................................................2430.33101000000000
...........................................................................................................................................................................................................TAATA-----A---CACTTG---------CC-GT-TTTC-GTTC------------------------------------..............................................................................................................................2430.33100100000000
...................................TCGGGCCCCACG--TTGGGCGCCG..............................................................................................................................................................................................................................................................................................................................................................22100.30303000000000
..................................................TGGGCGCCAGATGTAACGAACTGATT.............................................................................................................................................................................................................................................................................................................................................26200.30610020030000
.................................................TTGGGCGCCAGATGTAACGAACTGATT.............................................................................................................................................................................................................................................................................................................................................27200.30606000000000
....................................................................................................................................................................................................................................................................................................TATTCG------------------TGCTTAGACTTACAATGGAAA........................................................................2740.25101000000000
........................................................................................................................................................................................................................................................................................................CG------------------TGCTTAGACTTACAATGGAA.........................................................................2240.25101000000000
.....................................................................................................................................................................................................................................................................................................................................TTACAATGGAATTTGATT-----------ATCT--------AG-CC......................................2640.25101000000000
......................................................................................................................................................................................................................................................................................................................................TACAATGGAATTTGATT-----------ATCT--------AG-CCGT....................................2740.25101000000000
.................................................................................................................................................TGTGCGTTCGTC-TCACCAACTTTA...............................................................................................................................................................................................................................................2440.25101000000000
......................................................................................................................................................................................................................................................................................................................................TACAATGGAATTTGATT-----------ATCT--------AG-CCG.....................................2640.25101000000000
................................................................................................................................................................................................................................................TC-GTTC------------------------------------TGGGGTCTTTATTCG------------------TGCTTA.......................................................................................2740.25101000000000
.......................................................................................................................................................................................................................................................................................................TCG------------------TGCTTAGACTTACAATGGAATT.......................................................................2540.25100100000000
.......................................................................................................................................................................TTATAGTA-TATCGTGATCACCCGGT........................................................................................................................................................................................................................2540.25101000000000
...........................................................................................................................................................................................................................................................................................TGGGGTCTTTATTCG------------------TGCTTAGACT...................................................................................2540.25101000000000
......................................GGCCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................19200.25505000000000
....................................................................................................................................................................................................................................................................................................TATTCG------------------TGCTTAGACTTACAATGGAA.........................................................................2640.25101000000000
......................................................................................................................................TCAGTAGATTTTGTGCGTTCGTC-T..........................................................................................................................................................................................................................................................2440.25101000000000
......................................................................................................................................................................................................................................................................................................................................TACAATGGAATTTGATT-----------ATCT--------AG-CCGC....................................2740.25100100000000
.....................................................................................................................................................................................TGATCACCCGGTT-ACCA---GTAATA-----A---CACT............................................................................................................................................................................................28200.25505000000000
.....................................GGGCCCCACG--TTGGGCGCCG..............................................................................................................................................................................................................................................................................................................................................................20180.22404000000000
.........................................................................................T--CTGCTCGCTACGG--AATACGT----------TCGG.........................................................................................................................................................................................................................................................................................2550.20101000000000
.....GCTCCGC-CGATGCCG--------C-GGTGTCGGG.................................................................................................................................................................................................................................................................................................................................................................................2550.20101000000000
.................................TGTCGGGCCCCACG--TTGGGC..................................................................................................................................................................................................................................................................................................................................................................2060.17100100000000
...................................TCGGGCCCCACG--TTGGGCGCCAGG............................................................................................................................................................................................................................................................................................................................................................2460.17101000000000
....................................CGGGCCCCACG--TTGGGCG.................................................................................................................................................................................................................................................................................................................................................................18130.15220000000000
..................................................TGGGCGCCAGATGTAACGAACTGA...............................................................................................................................................................................................................................................................................................................................................24200.15302010000000
..................................................TGGGCGCCAGATGTAACGAAC..................................................................................................................................................................................................................................................................................................................................................21200.15303000000000
...........................................CACG--TTGGGCGCCAGATGTAACGAA...................................................................................................................................................................................................................................................................................................................................................25150.13200200000000
...............................................................................................................................GCTAGC-TCAGTAGATTTTGTGCGTT................................................................................................................................................................................................................................................................25100.10100100000000
....................................CGGGCCCCACG--TTGGGCGCCG..............................................................................................................................................................................................................................................................................................................................................................21100.10101000000000
....................................CGGGCCCCACG--TTGGGCGCCC..............................................................................................................................................................................................................................................................................................................................................................21100.10100100000000
....................................CGGGCCCCACG--TTGGGCGCC...............................................................................................................................................................................................................................................................................................................................................................20100.10100100000000
....................................................GGCGCCAGATGTAACGAACTGATTTT...........................................................................................................................................................................................................................................................................................................................................26200.10201100000000
..................................................TGGGCGCCAGATGTAACGAACT.................................................................................................................................................................................................................................................................................................................................................22200.10200200000000
.....................................GGGCCCCACG--TTGGGCGC................................................................................................................................................................................................................................................................................................................................................................18200.10210100000000
..........................................CCACG--TTGGGCGCCAGATGTAACGAAC..................................................................................................................................................................................................................................................................................................................................................27110.09101000000000
...................................TCGGGCCCCACG--TTGGGCG.................................................................................................................................................................................................................................................................................................................................................................19130.08101000000000
..........................................CCACG--TTGGGCGCCAGATGTAACG.....................................................................................................................................................................................................................................................................................................................................................24140.07100100000000
............................................ACG--TTGGGCGCCAGATGTAACGAAC..................................................................................................................................................................................................................................................................................................................................................25150.07101000000000
...........................................CACG--TTGGGCGCCAGATGTAACGAACT.................................................................................................................................................................................................................................................................................................................................................27150.07101000000000
...................................TCGGGCCCCACG--TTGGGC..................................................................................................................................................................................................................................................................................................................................................................18150.07110000000000
...........................................CACG--TTGGGCGCCAGATGTAACGAACA.................................................................................................................................................................................................................................................................................................................................................27150.07101000000000
.............................................CG--TTGGGCGCCAGATGTAACGAACT.................................................................................................................................................................................................................................................................................................................................................25160.06101000000000
.................................................................................................................................TAGC-TCAGTAGATTTTGTGCGTTCT..............................................................................................................................................................................................................................................................25170.06101000000000
.....................................GGGCCCCACG--TTGGGCG.................................................................................................................................................................................................................................................................................................................................................................17200.05100000100000
......................................................................................................................................................................................GATCACCCGGTT-ACCA---GTAATA-----A---CAC.............................................................................................................................................................................................26200.05100100000000
........................................................................................................................................................................................TCACCCGGTT-ACCA---GTAATA-----A---CACTTG---------C................................................................................................................................................................................28200.05101000000000
..............................................G--TTGGGCGCCAGATGTAACGAACTGAT..............................................................................................................................................................................................................................................................................................................................................27200.05101000000000
......................................................CGCCAGATGTAACGAACTGATT.............................................................................................................................................................................................................................................................................................................................................22200.05101000000000
........................................................................................................................................................................................TCACCCGGTT-ACCA---GTAATA-----A---CACT............................................................................................................................................................................................25200.05100100000000
...................................................GGGCGCCAGATGTAACGAACTGATT.............................................................................................................................................................................................................................................................................................................................................25200.05100100000000
..................................................TGGGCGCCAGATGTAACGAACTGATTT............................................................................................................................................................................................................................................................................................................................................27200.05100010000000
.............................................................................................TGCTCGCTACGG--AATACG........................................................................................................................................................................................................................................................................................................18200.05101000000000
..................................................TGGGCGCCAGATGTAACGAACTG................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
...................................................GGGCGCCAGATGTAACGAACTGAT..............................................................................................................................................................................................................................................................................................................................................24200.05100100000000
..........................................................................................................................................................................................ACCCGGTT-ACCA---GTAATA-----A---CACT............................................................................................................................................................................................23200.05101000000000
.................................................TTGGGCGCCAGATGTAACGAACTGATA.............................................................................................................................................................................................................................................................................................................................................27200.05101000000000
......................................................CGCCAGATGTAACGAACTGA...............................................................................................................................................................................................................................................................................................................................................20200.05101000000000
droEre2
-------------------------------------------------TTGGACGCCACATGTAACGAACTGATTTTT-GTT--GG--T--CTGCTCGCTACGC--GGTACTT----------GCAGCTAGC-TCAAAAT-------ATGTTCTTC-TCACCAAATTTATATT--AAACTTGATCACCCCATT-ACCA---GTAA-----------CACTT--------AGCA-GT-TTTTGTTTC---C---------------------------------TTGATCTTTATTTG-------------------TCTCTT-TTTACAATTTGGTTTGACTCTCCATTG--------TGGGTTTCA-CCTCCGT-----C--GTGG-------------------AASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droSec2
C----------------------------------------CCCACG--TTGGGCGCCAGATATGACGAACTGATTTTG-ATT--GG--T--CTGCTCGCTACGA--GATACGT----------GCGGCTAGC-TCAGAGGATTTTGTGTGTTCGTC-CCACCAAATTTATATC--AATCGTGATCACCCGGTT-A----------GA-----A---CACTA--------AGTT-GT-TCTTATGTC---C---------------------------------TTGATCTTTATTA---------------------TTCGC-TTTACACTGCAACTCGATCTCCCGTGG--------TAGGTTTCT-CCTCAGT-----A--GTGG--------------------ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................ATC--AATCGTGATCACCCGGTT-A----------GA-----A---C...............................................................................................................................................................................................2611.0011000
.......................................................................TGATTTTG-ATT--GG--T--CTGCTCGC.....................................................................................................................................................................................................................................................................................................................2211.0010010
................................................................................................................................................................................................................................................................................................................................................CTCGATCTCCCGTGG--------TAGGTT............................................2111.0010010
......................................................................................................................................................................................................................................................................................................................................TACACTGCAACTCGATCTCCCGTGG--------T.................................................2611.0011000
..........................................................................................................................................AGGATTTTGTGTGTTCGTC-CCACCAAA...................................................................................................................................................................................................................................................2711.0011000
..........................................................................................................................................AGGATTTTGTGTGTTCGTC-CCACCA.....................................................................................................................................................................................................................................................2511.0011000
........................................................................................................A--GATACGT----------GCGGCTAGC-TCAG...............................................................................................................................................................................................................................................................................2190.1110010
droSim2
-------------------------------------------------------------TGTAACGAACTGATTTTG--TT--TG--T--CTGCTCGCTACGG--AATACGT----------GCGGCTAGC-TCAGTAGAGTTTGTGCGTTCGTC-CCACCAAATTTATAGAA-TAACGTGATCACCCGGTT-ACCA---GTAATA-----A---CACTCG---------CA-G--TTTC-GTTC------------------------------------TCGGGTCTTTATTTG------------------AGCTCAG-TTTACAATGTACTTCAATTGTCCGG--------------------A-------------------------------------CGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CCACCA.....................................................................................................................................................................................................................................................242012.502500000000249000001000
............................................................................................................................................GAGTTTGTGCGTTCGTC-CCACCAA....................................................................................................................................................................................................................................................24204.5591000000007840000000
............................................................................................................................................GAGTTTGTGCGTTCGTC-CCACCAAA...................................................................................................................................................................................................................................................25201.1523000000103190000000
.................................................................................................................................................TGTGCGTTCGTC-CCACCAAATT.................................................................................................................................................................................................................................................22200.851700010048400000000
............................................................................................................................................GAGTTTGTGCGTTCGTC-...........................................................................................................................................................................................................................................................17200.6012000000000012000000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CCACC......................................................................................................................................................................................................................................................23200.501000000000054010000
............................................................................................................................................GAGTTTGTGCGTTCGTC-CCACCT.....................................................................................................................................................................................................................................................23200.40800000003050000000
............................................................................................................................................GAGTTTGTGCGTTCGTC-CCACCAAAA..................................................................................................................................................................................................................................................26200.40800000000170000000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CC.........................................................................................................................................................................................................................................................20200.35700000000000034000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CCACCAA....................................................................................................................................................................................................................................................25200.35700000050020000000
.......................................................................................................................................................TTCGTC-CCACCAAATT.................................................................................................................................................................................................................................................16200.30600000000006000000
................................................................................................................................................TTGTGCGTTCGTC-CCACCAAATT.................................................................................................................................................................................................................................................23200.30600000002040000000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CCACCAAAT..................................................................................................................................................................................................................................................27200.30600020012010000000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CCAC.......................................................................................................................................................................................................................................................22200.30600100003010001000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CCA........................................................................................................................................................................................................................................................21200.25500000003000020000
.................................................................................................................................................................................................................................................C-GTTC------------------------------------TCGGGTCTTG....................................................................................................................1540.25100000000010000000
..........................................................................TTTTG--TT--TG--T--CTGCTC.......................................................................................................................................................................................................................................................................................................................1640.25100000000001000000
.................................................................................................................................................TGTGCGTTCGTC-CCACC......................................................................................................................................................................................................................................................17200.20400000000013000000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CCACCAAAAA.................................................................................................................................................................................................................................................28200.20400000002110000000
............................................................................................................................................GAGTTTGTGCGTTCGTC-CCACCAT....................................................................................................................................................................................................................................................24200.20400000000040000000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CCACCT.....................................................................................................................................................................................................................................................24200.20400000010102000000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-...........................................................................................................................................................................................................................................................18200.15300000000003000000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CCACCAAA...................................................................................................................................................................................................................................................26200.15300000000002100000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CCACCAAATA.................................................................................................................................................................................................................................................28200.15300000000210000000
................................................................................................................................................TTGTGCGTTCGTC-CCACCAAAT..................................................................................................................................................................................................................................................22200.10200000000020000000
............................................................................................................................................GAGTTTGTGCGTTCGTC-CCACCAAAAA.................................................................................................................................................................................................................................................27200.10200000000020000000
......................................................................................................................................................GTTCGTC-CCACCAAATT.................................................................................................................................................................................................................................................17200.10200000000002000000
...................................................................................................................................................TGCGTTCGTC-CCACCAAATT.................................................................................................................................................................................................................................................20200.10200010001000000000
............................................................................................................................................GAGTTTGTGCGTTCGTC-CCACCAAG...................................................................................................................................................................................................................................................25200.05100000000010000000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CCACCAAAAAA................................................................................................................................................................................................................................................29200.05100000001000000000
................................................................................................................................................TTGTGCGTTCGTC-CC.........................................................................................................................................................................................................................................................15200.05100000000010000000
.................................................................................................................................................TGTGCGTTCGTC-CCACCAA....................................................................................................................................................................................................................................................19200.05100000000001000000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CCAA.......................................................................................................................................................................................................................................................22200.05100000001000000000
................................................................................................................................................TTGTGCGTTCGTC-CCACCA.....................................................................................................................................................................................................................................................19200.05100000000001000000
.............................................................................................................................................AGTTTGTGCGTTCGTC-CCACCAAATT.................................................................................................................................................................................................................................................26200.05100000000010000000
............................................................................................................................................GAGTTTGTGCGTTCGTC-CCACTT.....................................................................................................................................................................................................................................................23200.05100000000010000000
.................................................................................................................................................TGTGCGTTCGTC-CCACCAAA...................................................................................................................................................................................................................................................20200.05100000001000000000
............................................................................................................................................GAGTTTGTGCGTTCGTC-CCACCAAAT..................................................................................................................................................................................................................................................26200.05100000010000000000
.............................................................TGTAACGAACTGATTTA...........................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
..................................................................................................................................................GTGCGTTCGTC-CCACCA.....................................................................................................................................................................................................................................................17200.05100000000001000000
..............................................................................................................................................GTTTGTGCGTTCGTC-CCACCAAATT.................................................................................................................................................................................................................................................25200.05100000000100000000
...............................................................................................................................................TTTGTGCGTTCGTC-CCACCA.....................................................................................................................................................................................................................................................20200.05100000001000000000
..............................................................................................................................................GTTTGTGCGTTCGTC-CCACCA.....................................................................................................................................................................................................................................................21200.05100000000100000000
................................................................................................................................................TTGTGCGTTCGTC-CCACCAAAAA.................................................................................................................................................................................................................................................23200.05100000000010000000
..............................................................................................................................................GTTTGTGCGTTCGTC-CCACCAA....................................................................................................................................................................................................................................................22200.05100000001000000000
...........................................................................................................................................AGAGTTTGTGCGTTCGTC-CCACCAAAC..................................................................................................................................................................................................................................................27200.05100000000001000000
...............................................................................................................................................TTTGTGCGTTCGTC-CCACCAAA...................................................................................................................................................................................................................................................22200.05100000001000000000
................................................................................................................................................TTGTGCGTTCGTC-CCACCAAA...................................................................................................................................................................................................................................................21200.05100000010000000000
.............................................................TGTAACGAACTGATTA............................................................................................................................................................................................................................................................................................................................................16200.05100000000010000000
............................................................................................................................................GAGTTTGTGCGTTCGTC-CCA........................................................................................................................................................................................................................................................20200.05100000000001000000
............................................................................................................................................GAGTTTGTGCGTTCGTC-CCACCA.....................................................................................................................................................................................................................................................23200.05100000000000010000
dm3
------------------------------------------------------------ATGTAACAAACCGATTTAA--TT--GG--T--CTGCTCGCTACAA--GATACGC----------GAGGCTAGC-TCAGAAATTTTCAAGTGTTCGTC-CCACCAAATTTATAGA--AAACGTCATCACCCGGTT-ACCA---GTATCA-----A---CAATT--------AGCA-GT-TCTC-GTTT------------------------------------CATTTTTTTCATTTT------------------GGCTCGC-TTGCCACCTAAATTTGATCTCCCGT------------------------AG--------------------------------TGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................TTTTTTTCATTTT------------------GGCTCGC-TT...................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CGC-TTGCCACCTAAATTTGATCTC................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................AGGCTAGC-TCAGAAATTTTC.......................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................TTAA--TT--GG--T--CTGCTCGCTACAA--GA............................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TT--GG--T--CTGCTCGCTACAA--GAT...........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TTTTTTTCATTTT------------------GGCTCGC-TTGCCACC.............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GCTAGC-TCAGAAATTTTCAAGTGTTC...............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................TATAGA--AAACGTCATCACCCGGTT-AC....................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................ACCA---GTATCA-----A---CAATT--------AGCA-GT-TC.........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................A--TT--GG--T--CTGCTCGCTACAA--G.............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................CAA--GATACGC----------GAGGCTAGC-TC.................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................TTTAA--TT--GG--T--CTGCTCGCTACAA--GATA..........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TT--GG--T--CTGCTCGCTACAA--GATA..........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................T-ACCA---GTATCA-----A---CAATT--------AGCA-GT-TCTC-......................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TAGA--AAACGTCATCACCCGGT........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................CAAATTTATAGA--AAACGTCATCACCCGG.........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TCACCCGGTT-ACCA---GTAAA..........................................................................................................................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
droEug1
GAATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--------GA-TCGTAGG-----G--CTGC--------------------ASizeHit CountTotal NormTotal
No Reads
droBia1
TTCCCACTCTGT-TGATGTAGC-TTTCAC-CGCTG-GGACAATCACGTTTTGGCCGCCAGATGTAACGAACTGATTTGT--TTGCAT--T--CTGCTCGTTACGA--TATTTGT----------GCGGCTAGC-TCAGTAGATTGTGTGTGTTCGTC-CCACAAAATTTATAT---AAACGTGACCGCCCAGTAGTTCA---GTGAGA-----A---AGCA--CAGAATTCACG-G--TTTC-GTAG------------------------------------TGGG-------------------------------------TTTATTGCGGG-T---A-----------TAATTAC-----------------ATTCGG--CT---------------------TTSizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------------------------------TTGGGCGCCAGATGTAACGAACTGATTTTT--AC--GG--T--TTGCTCGCTACGA--AGATCGT----------GCGGCTAGC-TCAGTAGA-TTTGTGTGTTCGTC-CCACCAAATTTATAT---AAACGTGACCGCCCGGTT-AACA---GTAA-A-----A---CATTT-CAGAA----------TTAA-GTTCAAGGAGGC-GTTTATTTACGGC------------------------------------------------TCTGGT-TTTACAATGAT-T-----------------ATTG--------TG-A-CTCGT-----G--CTG---------------------ASizeHit CountTotal NormTotal
No Reads
droEle1
CCCCATTTCTGTTTGATGCTGAATTTCAC-TGTCA-GGAAAATCACGTTTTGGGCGCCAGATGTAACGAACAGATTTTC--TTGGCTTAT--CCGCTCGCTACGA--ATGTCGT----------GCGGCTAGC-TCAGAAGA-TGTAAGTGTTCGTC-CCACCAAATTTATAT---AAACGTGATCGCCCTATTGATCA---GAGAAA-----A---CGCA--CAGAC--AGAT-TGGGAATATACG---AAGATCTTTTATTTGCCGACTTGACCCTCGGCCGGGGTT-----------------------------TTGTA-TTGACAATGC----------TCCGTCG--------TCGGCTCCTAT-----C-----CACGTTGAACGTCTCGCTGGAGTGTGATSizeHit CountTotal NormTotal
No Reads
droRho1
G-------------------------------------GGCCCCACG--TTGGGTGCCAGATGTAACGAACTGTTTTTTTTAT--GT--T--TTGCTCGCTACGA--ATTTCGT----------GCGGCTAGC-TCAGTAGAATTTGTGCGTTCGTC-CCACCAAATTTATATT--AAACGTGACCGCCCGGTT-AACA---GTAACA-----A---AACTT-CAGAA----------TTCA-GTAA-AGGAGGC-GTTTATTTACG--------------------------------------------------GCTCTGGTTGACAAT--------------------------------------------ATTTGA--AT---------------------ATSizeHit CountTotal NormTotal
No Reads
droFic1
TCCCATCTTTGC-TGTTTCC---ATTCACCTGTTA-CGACAATCACG--TTGGGCGCCATATGTAACGAACTGTTTTTG-CTTACTT--TTTGTTCTCGTTACTG--AAT-TGT----------GCGGCTAGC-TCAGCAATAGTTATATGTCCGTC-CCACCAAATTTATAT----GTTGTGATTGCCCAA----CCA---GTGAAAAGATAA---CAACTT---------TG-TT-TCTC-GTTT------------------------------------CACAA----------CTTATTTATTCG------ATCTCTGAATCTCAAT--------------------------------------------ATTTG--------------------------ATSizeHit CountTotal NormTotal
No Reads
droKik1
TTGGATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAATTGGAAGTTATT-----------ATAC--------TG-CCGTAGT-----G--TCGG--------------------ASizeHit CountTotal NormTotal
No Reads
droAna3
GTCGTG--------------------------GGTTCGAGTCCCACG--TTGGGCGCCAGGTGTAACGAACTGTTTTGC-TAT--GT--T--TTGCTGGCAATAA--ACGC--C----------GCGGCTAGC-TCAC-AGAGGTTGAGGGTACGTT-CCACCGAATTTATAGATTCGACGTGATTGCCCGA-G-CCCA---GAAATA-----ACACGGTATT--------GCT-TC-TTTTCAAAT--------------------------AAATCCC---------CTTTATT-G------------------TAATTAA-TTTACAAAGGAATAAA----------GAGAATCT--------CA-CCG---------G--CTG--------------------TCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..CGTG--------------------------GGTTCGAGTCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................29114.00140000311
...................................................................................................................................................................................CGTGATTGCCCGA-G-CCCA---GAAATA-----AC..................................................................................................................................................................................................26207.4514901490000
..................................TTCGAGTCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................2313.003110001
.....................................................................................................................................................................................TGATTGCCCGA-G-CCCA---GAAATA-----ACACGG..............................................................................................................................................................................................28202.10424200000
....TG--------------------------GGTTCGAGTCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................2712.002010001
................................GGTTCGAGTCCCACG--TTGGG...................................................................................................................................................................................................................................................................................................................................................................2012.002100001
.TCGTG--------------------------GGTTCGAGTCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................3012.002000011
................................GGTTCGAGTCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................2512.002000002
...................................................................................................................................................................................CGTGATTGCCCGA-G-CCCA---GAAATA-----ACAC................................................................................................................................................................................................28201.30260260000
.....................................................................................................................................................................................TGATTGCCCGA-G-CCCA---GAAATA-----ACA.................................................................................................................................................................................................25201.05210210000
.................................GTTCGAGTCCCACG--TTGG....................................................................................................................................................................................................................................................................................................................................................................1811.001000001
................................GGTTCGAGTCCCACG--TTGGGCG.................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................TCCCACG--TTGGGCGCCAGGTGTAACGAAC..................................................................................................................................................................................................................................................................................................................................................2911.001010000
...GTG--------------------------GGTTCGAGTCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................2811.001010000
.................................GTTCGAGTCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................2411.001000001
GTCGTG--------------------------GGTTCGAGTCCCA............................................................................................................................................................................................................................................................................................................................................................................1921.002100001
...................................................................GAACTGTTTTGC-TAT--GT--T--TTGCTGGC.....................................................................................................................................................................................................................................................................................................................2620.501010000
.TCGTG--------------------------GGTTCGAGTCCCA............................................................................................................................................................................................................................................................................................................................................................................1820.501000010
...................................................................................................................................................................................CGTGATTGCCCGA-G-CCCA---GAAATA-----ACA.................................................................................................................................................................................................27200.357700000
........................................................................................................A--ACGC--C----------GCGGCTAGC-TCAC-AGAGGTT.......................................................................................................................................................................................................................................................................26200.357700000
...........................................................................................................................................................................................................................TATT--------GCT-TC-TTTTCAAAT--------------------------AAATCCC---------C.......................................................................................................................26200.306060000
.............................................................................................................................................................................................................................TT--------GCT-TC-TTTTCAAAT--------------------------AAATCCC---------CTT.....................................................................................................................26200.306600000
..........................................................................................................................................................................TAGATTCGACGTGATTGCCCGA-G-CCCA---...............................................................................................................................................................................................................27200.255500000
........................................................................................................................................................................TATAGATTCGACGTGATTGCCCGA-G-C.....................................................................................................................................................................................................................26200.204400000
..............................................................................................................C--C----------GCGGCTAGC-TCAC-AGAGGTTGAGGG..................................................................................................................................................................................................................................................................27200.153300000
.........................................................................................................................................................................ATAGATTCGACGTGATTGCCC...........................................................................................................................................................................................................................21200.153030000
............................................................................................................................................................................GATTCGACGTGATTGCCCGA-G-CCCA---GA.............................................................................................................................................................................................................27200.153300000
..................................................................................................................................AGC-TCAC-AGAGGTTGAGGGTACGTT-C..........................................................................................................................................................................................................................................................26200.153300000
..................................................TGGGCGCCAGGTGTAACGAACT.................................................................................................................................................................................................................................................................................................................................................22200.153300000
...........................................................................................................................................................................AGATTCGACGTGATTGCCCGA-G-CCCA---...............................................................................................................................................................................................................26200.153300000
...........................................CACG--TTGGGCGCCAGGTGTAACGAACTG................................................................................................................................................................................................................................................................................................................................................28140.142200000
......................................................................................................................................................................TTTATAGATTCGACGTGATTGCCCG..........................................................................................................................................................................................................................25200.102200000
......................................................................................................................................................................................................................................................................................................................................TACAAAGGAATAAA----------GAGAATCT--------CA-CCG---------G--C........................29200.102200000
........................................................................................................................................................................TATAGATTCGACGTGATTGCCCGA-G-......................................................................................................................................................................................................................25200.102020000
...............................................................................................................................................................................TCGACGTGATTGCCCGA-G-CCCA---GAAATA-----....................................................................................................................................................................................................28200.102020000
...............................................................................................................................................................................................................A-----ACACGGTATT--------GCT-TC-TTTTCAAAT--------------------------AAA.....................................................................................................................................28200.102200000
.........................................................................................................................................C-AGAGGTTGAGGGTACGTT-CCACCGAAT..................................................................................................................................................................................................................................................28200.102200000
....................................................................................................................................................................AATTTATAGATTCGACGTGATTGCCCGA-........................................................................................................................................................................................................................28200.102200000
......................................................................................................................................................................................................................................................................................................................................TACAAAGGAATAAA----------GAGAATCT--------CA-CC......................................26200.102200000
......................................................................................................................................................................................GATTGCCCGA-G-CCCA---GAAATA-----ACACGG..............................................................................................................................................................................................27200.102020000
..........................................CCACG--TTGGGCGCCAGGTGTAACGAACT.................................................................................................................................................................................................................................................................................................................................................28120.081100000
.........................................CCCACG--TTGGGCGCCAGGTGTAACGAAC..................................................................................................................................................................................................................................................................................................................................................28120.081100000
...........................................CACG--TTGGGCGCCAGGTGTAACGAAC..................................................................................................................................................................................................................................................................................................................................................26140.071100000
.............................................CG--TTGGGCGCCAGGTGTAACGAAC..................................................................................................................................................................................................................................................................................................................................................24140.071100000
...........................................CACG--TTGGGCGCCAGGTGTAACGAAT..................................................................................................................................................................................................................................................................................................................................................26140.071100000
............................................ACG--TTGGGCGCCAGGTGTAACGAACTG................................................................................................................................................................................................................................................................................................................................................27140.071100000
...........................................CACG--TTGGGCGCCAGGTGTAACGA....................................................................................................................................................................................................................................................................................................................................................24140.071100000
............................................................GTGTAACGAACTGTTTTGC-TAT--GT--T--.............................................................................................................................................................................................................................................................................................................................25200.051001000
...............................................................................................................................................................................................................................................TTTCAAAT--------------------------AAATCCC---------CTTTATT-G------------------TAAT.........................................................................................27200.051010000
...................................................................................................................................................................GAATTTATAGATTCGACGTGATTGC.............................................................................................................................................................................................................................25200.051010000
..........................................................................................................................................................................TAGATTCGACGTGATTGCC............................................................................................................................................................................................................................19200.051010000
....................................................................................................................................................................................................................................................................................................................................TTTACAAAGGAATAAA----------GAGAATCT--------CA-CCG---------............................29200.051100000
..................................................................................................................................................................................ACGTGATTGCCCGA-G-CCCA---GAAATA-----A...................................................................................................................................................................................................26200.051010000
..................................................................................................................................AGC-TCAC-AGAGGTTGAGGGTACGTT-...........................................................................................................................................................................................................................................................25200.051100000
...........................................................................................................................................................................................................................TATT--------GCT-TC-TTTTCAAAT--------------------------AAATCCC---------CTT.....................................................................................................................28200.051010000
...........................................................................................................................................................................................................................................................................................................................................AGGAATAAA----------GAGAATCT--------CA-CC......................................21200.051100000
........................................................................................................................................................................................................................................................................................................................................CAAAGGAATAAA----------GAGAATCT--------CA-CC......................................24200.051010000
.........................................................................................................................................................................ATAGATTCGACGTGATTGCCCGA-G-CCC...................................................................................................................................................................................................................27200.051010000
..................................................................................................................................................................................................................................................................................................................................................AA----------GAGAATCT--------CA-CCG---------G--CTG--------------------T.20200.051100000
............................................................................................................................GCGGCTAGC-TCAC-AGAGGT........................................................................................................................................................................................................................................................................19200.051000001
....................................................................................................................................................................................................................................................................................................................................TTTACAAAGGAATAAA----------GAGAATCT--------CA-........................................26200.051100000
.........................................................................................................................................................CGTT-CCACCGAATTTATAGATTCG.......................................................................................................................................................................................................................................24200.051010000
..................................................................................................................................AGC-TCAC-AGAGGTTGAGGGTAC...............................................................................................................................................................................................................................................................22200.051010000
....................................................................................................................................................................AATTTATAGATTCGACGTGAT................................................................................................................................................................................................................................21200.051100000
..............................................................................................................................................................................................................TA-----ACACGGTATT--------GCT-TC-TTTTC......................................................................................................................................................................22200.051010000
..................................................TGGGCGCCAGGTGTAACGAACTGT...............................................................................................................................................................................................................................................................................................................................................24200.051100000
.......................................................................................................................................CAC-AGAGGTTGAGGGTACGTT-CC.........................................................................................................................................................................................................................................................23200.051010000
........................................................................................................................................................................TATAGATTCGACGTGATTGCCCG..........................................................................................................................................................................................................................23200.051000010
...........................................................................................................................................................................................................................................................................................................................................AGGAATAAA----------GAGAATCT--------CA-CCG---------G--C........................24200.051010000
...........................................................................................................................................................................................................AAATA-----ACACGGTATT--------GCT-TC-TTTTCAAA...................................................................................................................................................................28200.051100000
.........................................................................................................................................................................................................................................................................................................................................AAAGGAATAAA----------GAGAATCT--------CA-CCG---------G--CTG--------------------..28200.051100000
..........................................................................................................................................................................................................................................................................................................................................AAGGAATAAA----------GAGAATCT--------CA-CCG---------G--CTG--------------------TC29200.051100000
...................................................................................................................................GC-TCAC-AGAGGTTGAGGGTACGTT-CC.........................................................................................................................................................................................................................................................26200.051100000
......................................................................................................................................................GTACGTT-CCACCGAATTTATAGATTCGAC.....................................................................................................................................................................................................................................29200.051010000
................................................................................................................................................................................CGACGTGATTGCCCGA-G-CCC...................................................................................................................................................................................................................20200.051010000
........................................................................................................................................................................TATAGATTCGACGTGATTGCCCGA-G-CCCA---...............................................................................................................................................................................................................29200.051100000
............................................................................................................................................GAGGTTGAGGGTACGTT-CCACCGAAT..................................................................................................................................................................................................................................................26200.051100000
.................................................................................................................................TAGC-TCAC-AGAGGTTGAGGGTA................................................................................................................................................................................................................................................................22200.051100000
.........................................................................................................................................................................................TGCCCGA-G-CCCA---GAAATA-----ACACGG..............................................................................................................................................................................................24200.051100000
.................................................................................................................................................................................................G-CCCA---GAAATA-----ACACGGTATT--------GCT-..............................................................................................................................................................................24200.051010000
.........................................................................................................................................................................................................................................T-TC-TTTTCAAAT--------------------------AAATCCC---------CTTTATT-................................................................................................................26200.051100000
...................................................................................................................................GC-TCAC-AGAGGTTGAGGGTACG..............................................................................................................................................................................................................................................................22200.051001000
.................................................................................................................................................TGAGGGTACGTT-CCACCGAATTTATA.............................................................................................................................................................................................................................................26200.051100000
droBip1
CTCCAC-G---------------GGCCACGCGCTG-T-GGCCCCACG--TTGGGCGCCAGTTGTAACGAACTGTTTTGT--CTG-CT--T--CCGCTCGCCACAA--TATG-CC----------GCGGCTAGC-TCAT-AGAGTCTGCGGGTTAGTT-CCATCGAATTTATAGTT-CGACGCGCTTGCCCGA-G-CCCA---GAAATA-----ATA-CAAAT--------AGCT-TG-TATTTTATC---CAGTCTCTTTATTTGCTGC--------TCC--------------------------------------TTCTA-TTTACAATAATAT----------------------------------------------------------------------TTSizeHit CountTotal NormTotal
No Reads
dp5
GTCCTACT---------------ATTCATC-GTTG-TAGGCCCCACA--TTGGGCGCGAGTTGTAACGGACCTACTTTT--TG--G---------GCCGTTT--G--AGTTTGC----------TGGGCTCGC-TCAGCGGT--CGGCAGATTCGTT-GCAACGTATTTTTATT------GTTGCCCCCCAACG-ACAA---ATAATA-----A---AACCTT----------------CTTTAATC-------------------------TAATTTCG---------CTTTATTCG--TAGTTA----------TATTAGGACTTATGGCTAGATATGA-----------CAATTT--------TA-C-TTAGC-----C--ACG---------------------GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................T--G--AGTTTGC----------TGGGCTCGC-TCAGCG.............................................................................................................................................................................................................................................................................24204.509008900010000
............................................................TTGTAACGGACCTACTTTT--TG--G---------..........................................................................................................................................................................................................................................................................................................................2261.5090400000500
............................................................................................................................................GT--CGGCAGATTCGTT-GCAACGTAT..................................................................................................................................................................................................................................................2461.1770700000000
............................................................................................................................................GT--CGGCAGATTCGTT-GCAACGTA...................................................................................................................................................................................................................................................2361.0060600000000
...........................ATC-GTTG-TAGGCCCCACA--TTGG....................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...........................................................GTTGTAACGGACCTACTTTT--TG--G---------GC........................................................................................................................................................................................................................................................................................................................2531.0030100000020
....TACT---------------ATTCATC-GTTG-TAGGCCCCA............................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.................................................................................TG--G---------GCCGTTT--G--AGTTTGC----------TGGGC........................................................................................................................................................................................................................................................................................2311.0010100000000
.............................................................................TT--TG--G---------GCCGTTT--G--AGTTTG........................................................................................................................................................................................................................................................................................................1911.0010100000000
...............................................................TAACGGACCTACTTTT--TG--G---------GC........................................................................................................................................................................................................................................................................................................................2151.0050200000210
.................................................................................TG--G---------GCCGTTT--G--AGTTTGC----------TGG..........................................................................................................................................................................................................................................................................................2111.0010100000000
.............................................................................................................................................T--CGGCAGATTCGTT-GCAACGTATTT................................................................................................................................................................................................................................................2560.6740400000000
..................................................................................................................................................................................................................................................TAATC-------------------------TAATTTCG---------CTTTATTCG--TAG..........................................................................................................2550.6030100000200
......................................................................................................................................TCAGCGGT--CGGCAGATTCG..............................................................................................................................................................................................................................................................19200.501001000000000
............................................................................................................................................GT--CGGCAGATTCGTT-GCAACGTATTTT...............................................................................................................................................................................................................................................2760.5030300000000
.............................................................................................................................................T--CGGCAGATTCGTT-GCAACGTATTTT...............................................................................................................................................................................................................................................2660.5030300000000
........................................................................................................G--AGTTTGC----------TGGGCTCGC-TCAGCGG............................................................................................................................................................................................................................................................................24200.4590900000000
.............................................................................................................................................T--CGGCAGATTCGTT-GCAACGTAT..................................................................................................................................................................................................................................................2360.3320200000000
............................................................................................................................................GT--CGGCAGATTCGTT-GCAACGTATTT................................................................................................................................................................................................................................................2660.3320200000000
............................................................TTGTAACGGACCTACTTTT--TG--G---------GCCG......................................................................................................................................................................................................................................................................................................................2630.3310000000010
.............................................................TGTAACGGACCTACTTTT--TG--G---------..........................................................................................................................................................................................................................................................................................................................2180.2520100000100
..................................................................................................................................................................................................................................................TAATC-------------------------TAATTTCG---------CTTTATTCG--TAGTTA----------.............................................................................................2840.2510100000000
............................................................................................................................TGGGCTCGC-TCAGCGGT--CGGCAGATT................................................................................................................................................................................................................................................................26200.2550300000200
............................................................................................................................TGGGCTCGC-TCAGCGGT--CGGC.....................................................................................................................................................................................................................................................................21200.2550500000000
....................................................................................................................................................................................................................................................................................TTCG---------CTTTATTCG--TAGTTA----------TATT.........................................................................................2350.2010100000000
...................................................................................................................................................................................................................................................................................................TTATTCG--TAGTTA----------TATTAGGACT...................................................................................2350.2010100000000
..................................................................CGGACCTACTTTT--TG--G---------GCC.......................................................................................................................................................................................................................................................................................................................1950.2010100000000
.....................................................................................................................................................................................................................................................................................TCG---------CTTTATTCG--TAGTTA----------TATTAGG......................................................................................2550.2010000000010
.................................................................ACGGACCTACTTTT--TG--G---------GCC.......................................................................................................................................................................................................................................................................................................................2050.2010100000000
.....................................................................................................................................................................................................................................................................................TCG---------CTTTATTCG--TAGTTA----------TATTA........................................................................................2350.2010100000000
.......................................................................................................................................CAGCGGT--CGGCAGATTCGTT-GCA........................................................................................................................................................................................................................................................2350.2010100000000
.....................................................................................................................................................................................................................................................................................TCG---------CTTTATTCG--TAGTTA----------TATTAGGACT...................................................................................2850.2010100000000
........................................................................................................G--AGTTTGC----------TGGGCTCGC-TCAGC..............................................................................................................................................................................................................................................................................22200.2040400000000
.................................................................................................................................TCGC-TCAGCGGT--CGGCAGATTC...............................................................................................................................................................................................................................................................22200.2040400000000
..................................................................................................................................................................................................................................................................................................TTTATTCG--TAGTTA----------TATTAGGACTT..................................................................................2550.2010000000010
............................................................................................................................................GT--CGGCAGATTCGTT-GCAACGTATT.................................................................................................................................................................................................................................................2560.1710100000000
.................................................................................................................................TCGC-TCAGCGGT--CGGCAGATTCGTT-G..........................................................................................................................................................................................................................................................2660.1710100000000
..........................................................................................................................................CGGT--CGGCAGATTCGTT-GCAACGTAT..................................................................................................................................................................................................................................................2660.1710100000000
.................................................................................................................................TCGC-TCAGCGGT--CGGCAGATTCGTT-...........................................................................................................................................................................................................................................................2560.1710100000000
.............................................................................................................................................T--CGGCAGATTCGTT-GCAACGTA...................................................................................................................................................................................................................................................2260.1710100000000
.....................................................................................................T--G--AGTTTGC----------TGGGCTCGC-TC.................................................................................................................................................................................................................................................................................20200.1530300000000
..................................................................................................................................CGC-TCAGCGGT--CGGCAGATTCG..............................................................................................................................................................................................................................................................22200.1530300000000
...................................................................................................................................................CAGATTCGTT-GCAACGTATTTTTA.............................................................................................................................................................................................................................................2470.1410100000000
.....................................................................................................................................................GATTCGTT-GCAACGTATTT................................................................................................................................................................................................................................................1970.1410100000000
............................................................TTGTAACGGACCTACTTTT--TG--....................................................................................................................................................................................................................................................................................................................................2170.1410100000000
.................................................................................................................................TCGC-TCAGCGGT--CGGCAGATTCGT.............................................................................................................................................................................................................................................................2480.1310100000000
......................................................................................................................................TCAGCGGT--CGGCAGATTCGT.............................................................................................................................................................................................................................................................2080.1310100000000
...............................................................TAACGGACCTACTTTT--TG--G---------..........................................................................................................................................................................................................................................................................................................................1980.1310000000010
.................................................................................................................................................................ACGTATTTTTATT------GTTGCCCCC............................................................................................................................................................................................................................22200.1020000000200
.....................................................................................................T--G--AGTTTGC----------TGGGCTCGC-TCAAA..............................................................................................................................................................................................................................................................................23200.1020200000000
............................................................................................................................TGGGCTCGC-TCAGCGGT--CGGCAG...................................................................................................................................................................................................................................................................23200.1020200000000
..................................................................................................................................CGC-TCAGCGGT--CGGCAGATT................................................................................................................................................................................................................................................................20200.1020200000000
...............................................................................................................TGC----------TGGGCTCGC-TCAGCGGT--CG.......................................................................................................................................................................................................................................................................22200.1020200000000
.....................................................................................................T--G--AGTTTGC----------TGGGCTCGC-TCAGA..............................................................................................................................................................................................................................................................................23200.1020200000000
........................................................................................................G--AGTTTGC----------TGGGCTCGC-TCAGCGGA--.........................................................................................................................................................................................................................................................................25200.1020200000000
.....................................................................................................T--G--AGTTTGC----------TGGGCTCGC-TCAGCGT............................................................................................................................................................................................................................................................................25200.1020000200000
.................................................................................................................C----------TGGGCTCGC-TCAGCGGT--CGGCAGA..................................................................................................................................................................................................................................................................25200.0510001000000
............................................................................................................................TGGGCTCGC-TCAGCGGT--CGGCAA...................................................................................................................................................................................................................................................................23200.0510000000100
................................................................................................................................CTCGC-TCAGCGGT--CGGCAGATTCG..............................................................................................................................................................................................................................................................24200.0510000100000
....................................................................................................TT--G--AGTTTGC----------TGGGCTCGC-TCAG...............................................................................................................................................................................................................................................................................23200.0510000001000
.................................................................................................................C----------TGGGCTCGC-TCAGCGGT--CGGCAC...................................................................................................................................................................................................................................................................24200.0510100000000
..............................................................................................................................GGCTCGC-TCAGCGGT--CGGCAG...................................................................................................................................................................................................................................................................21200.0510100000000
.................................................................................................................................TCGC-TCAGCGGT--CGGCAGAT.................................................................................................................................................................................................................................................................20200.0510010000000
......................................................................................................................................TCAGCGGT--CGGCAGATTC...............................................................................................................................................................................................................................................................18200.0510010000000
....................................................................................................TT--G--AGTTTGC----------TGGGCTCGC-TCAGC..............................................................................................................................................................................................................................................................................24200.0510100000000
...............................................................................................................................GCTCGC-TCAGCGGT--CGGA.....................................................................................................................................................................................................................................................................18200.0510100000000
.....................................................................................................T--G--AGTTTGC----------TGGGCTCGC-TT.................................................................................................................................................................................................................................................................................20200.0510100000000
....................................................................................................TT--G--AGTTTGC----------TGGGCTCGC-TCAGAAA............................................................................................................................................................................................................................................................................26200.0510100000000
..............................................................................................................TTGC----------TGGGCTCGC-TCAGCGGT--CG.......................................................................................................................................................................................................................................................................23200.0510100000000
............................................................................................................................TGGGCTCGC-TCAGCGGT--CGG......................................................................................................................................................................................................................................................................20200.0510100000000
....................................................................................................TT--G--AGTTTGC----------TGGGCTCGC-TCAAA..............................................................................................................................................................................................................................................................................24200.0510100000000
.................................................................................................................................TCGC-TCAGCGGT--CGGCAGATTCA..............................................................................................................................................................................................................................................................23200.0510100000000
.....................................................................................................T--G--AGTTTGC----------TGGGCTCGC-TCAGAA.............................................................................................................................................................................................................................................................................24200.0510100000000
.....................................................................................................T--G--AGTTTGC----------TGGGCTCGC-TCAGCGG............................................................................................................................................................................................................................................................................25200.0510000001000
...............................................................................................................................................................CAACGTATTTTTATT------GTTGCCC..............................................................................................................................................................................................................................22200.0510100000000
.................................................................................................................C----------TGGGCTCGC-TCAGCGGT--CGGC.....................................................................................................................................................................................................................................................................22200.0510100000000
............................................................................................................GTTTGC----------TGGGCTCGC-TCAGCGGT--CG.......................................................................................................................................................................................................................................................................25200.0510100000000
droPer2
G--------------------------------------GCCCCACG--TTGGGCGCCAGTTGTAACGAACCTGCTTTT--TG----------GGCTCGCTT--G--AGTTTGC----------TGGGCTTGC-TCAGCGGT--CGGCAGATTCGCA-GCAACGTATTTTTATT------GTTGCC-CCCAACG-ACAACAAATGATA-----A---GACTTT---------CCTTT-TCTTTACTT-------------------------GAATTTCG---------CTTTA------------------------------TTCGCAA----------------------------------------------------------------------------TTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-T..................................................................................................................................................................................................................................................................................20201.903824130001
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-TCAGCGG............................................................................................................................................................................................................................................................................26201.55310265000
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-TCAGCG.............................................................................................................................................................................................................................................................................25201.20240240000
....................................................................................................................................................................................................CAACAAATGATA-----A---GACTTT---------CCTTT-TCT........................................................................................................................................................................2711.001010000
.....................................................................................................................................................................................................AACAAATGATA-----A---GACTTT---------CCTTT-TC.........................................................................................................................................................................2511.001010000
.........................................................................................................................................................................................C-CCCAACG-ACAACAAATGATA-----A---GACTT...........................................................................................................................................................................................2711.001010000
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-TC.................................................................................................................................................................................................................................................................................21200.95190180001
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-TCAG...............................................................................................................................................................................................................................................................................23200.60120120000
..............................................................................................................................................................................................................TA-----A---GACTTT---------CCTTT-TCTTTACTT-------------------------GAAT.....................................................................................................................................27200.459081000
.................................................................................TG----------GGCTCGCTT--G--AGTTTGC----------TGG..........................................................................................................................................................................................................................................................................................22200.408080000
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-TA.................................................................................................................................................................................................................................................................................21200.357070000
..................................................TGGGCGCCAGTTGTAACGAACCTGCTT............................................................................................................................................................................................................................................................................................................................................27200.357070000
..................................................TGGGCGCCAGTTGTAACGAACCTG...............................................................................................................................................................................................................................................................................................................................................24200.357070000
............................................................TTGTAACGAACCTGCTTTT--TG----------GGCT........................................................................................................................................................................................................................................................................................................................25200.255050000
.................................................................................................CGCTT--G--AGTTTGC----------TGGGCTTG.....................................................................................................................................................................................................................................................................................21200.255140000
.....................................................................................................T--G--AGTTTGC----------TGGGCTTGC-TCAGC..............................................................................................................................................................................................................................................................................23200.204040000
..................................................TGGGCGCCAGTTGTAACGAACCTGCT.............................................................................................................................................................................................................................................................................................................................................26200.204130000
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-TCAAA..............................................................................................................................................................................................................................................................................24200.204040000
..............................................................................................................................................................................................................TA-----A---GACTTT---------CCTTT-TCTTTACTT-------------------------GAA......................................................................................................................................26200.204040000
..............................................................................................................................................................................................................TA-----A---GACTTT---------CCTTT-TCTTTACTT-------------------------GAAA.....................................................................................................................................27200.153030000
................................................................................................TCGCTT--G--AGTTTGC----------TGGGCT.......................................................................................................................................................................................................................................................................................20200.153030000
............................................................................................................................TGGGCTTGC-TCAGCGGT--CGGCAG...................................................................................................................................................................................................................................................................23200.153030000
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-C..................................................................................................................................................................................................................................................................................20200.153300000
..........................................CCACG--TTGGGCGCCAGTTGTAACGA....................................................................................................................................................................................................................................................................................................................................................25200.153210000
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-TTT................................................................................................................................................................................................................................................................................22200.102200000
.....................................................................................................T--G--AGTTTGC----------TGGGCTTGC-TCAGCGG............................................................................................................................................................................................................................................................................25200.102020000
............................................................................................................................TGGGCTTGC-TCAGCGGT--CGGCA....................................................................................................................................................................................................................................................................22200.102020000
...................................................GGGCGCCAGTTGTAACGAACCT................................................................................................................................................................................................................................................................................................................................................22200.102200000
............................................................................................................................................GT--CGGCAGATTCGCA-GCA........................................................................................................................................................................................................................................................18200.102020000
............................................................................................................................................................................................................................................T-TCTTTACTT-------------------------GAATTTCG---------CTTTA------------------------------TT...................................................................................25200.102020000
............................................................................................................................TGGGCTTGC-TCAGCGGT--CGGCAGA..................................................................................................................................................................................................................................................................24200.102020000
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-AA.................................................................................................................................................................................................................................................................................21200.102020000
..................................................TGGGCGCCAGTTGTAACGAACCTGCTTT...........................................................................................................................................................................................................................................................................................................................................28200.102020000
..................................................TGGGCGCCAGTTGTAACGAACCTGC..............................................................................................................................................................................................................................................................................................................................................25200.102020000
.................................................................................................................................................................ACGTATTTTTATT------GTTGCC-..............................................................................................................................................................................................................................19200.102020000
..............................................................................................................................................................................................................TA-----A---GACTTT---------CCTTT-TCTTTACTT-------------------------GAATT....................................................................................................................................28200.102020000
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-G..................................................................................................................................................................................................................................................................................20200.102200000
...............................................................................................................................................................................................................................................CTTTACTT-------------------------GAATTTCG---------CTTTA------------------------------TTCGCA...............................................................................27200.102020000
...............................................................................................................................................................................................................A-----A---GACTTT---------CCTTT-TCTTTACTT-------------------------G........................................................................................................................................23200.102020000
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-TCAGCGGT--.........................................................................................................................................................................................................................................................................27200.102020000
...........................................................GTTGTAACGAACCTGCTTTT--TG----------GGC.........................................................................................................................................................................................................................................................................................................................25200.102020000
.................................................................................................CGCTT--G--AGTTTGC----------TGGGCTT......................................................................................................................................................................................................................................................................................20200.102020000
................................................................................................TCGCTT--G--AGTTTGC----------TGGGCTTGC-...................................................................................................................................................................................................................................................................................23170.061010000
.................................................................................TG----------GGCTCGCTT--G--AGTTTGC----------TGGGCTT......................................................................................................................................................................................................................................................................................26170.061010000
..................................................................................................................................................................................................................................................TACTT-------------------------GAATTTCG---------CTTTA------------------------------TTC..................................................................................21200.051010000
.................................................TTGGGCGCCAGTTGTAACGAACCTG...............................................................................................................................................................................................................................................................................................................................................25200.051010000
.....................................................................................................T--G--AGTTTGC----------TGGGCTTGC-TA.................................................................................................................................................................................................................................................................................20200.051010000
......................................................CGCCAGTTGTAACGAACCTG...............................................................................................................................................................................................................................................................................................................................................20200.051010000
...........................................................................................................................................................................................................................................TT-TCTTTACTT-------------------------GAATTTCG---------CTTTA------------------------------TT...................................................................................26200.051010000
..................................................................................................................................................................................................................................................TACTT-------------------------GAATTTCG---------CTTTA------------------------------TTCGCAA----------------------------------------------------------------------------..25200.051010000
......................................................................................................................................................................................................ACAAATGATA-----A---GACTTT---------CCTTT-TCT........................................................................................................................................................................25200.051010000
.........................................................................................................................................................................................................................GACTTT---------CCTTT-TCTTTACTT-------------------------GAATT....................................................................................................................................25200.051010000
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-TCA................................................................................................................................................................................................................................................................................22200.051001000
.....................................................................................................T--G--AGTTTGC----------TGGGCTTGC-TCAGCGA............................................................................................................................................................................................................................................................................25200.051010000
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-TCAA...............................................................................................................................................................................................................................................................................23200.051010000
...............................................................TAACGAACCTGCTTTT--TG----------GGCTCGC.....................................................................................................................................................................................................................................................................................................................25200.051010000
.............................................................................................................................................T--CGGCAGATTCGCA-GCATA......................................................................................................................................................................................................................................................19200.051010000
.........................................................CAGTTGTAACGAACCTGCTTTT--........................................................................................................................................................................................................................................................................................................................................22200.051010000
..................................................TGGGCGCCAGTTGTAACGA....................................................................................................................................................................................................................................................................................................................................................19200.051001000
...................................................GGGCGCCAGTTGTAACGAACCTGCT.............................................................................................................................................................................................................................................................................................................................................25200.051010000
...................................................................................................................................................................................................................................................ACTT-------------------------GAATTTCG---------CTTTA------------------------------TTCG.................................................................................21200.051010000
..................................................TGGGCGCCAGTTGTAACGAACCT................................................................................................................................................................................................................................................................................................................................................23200.051010000
.............................................................TGTAACGAACCTGCTTTT--TG----------GGCTC.......................................................................................................................................................................................................................................................................................................................25200.051001000
..............................................................................................................................................................................................................TA-----A---GACTTT---------CCTTT-TCTTTACTT-------------------------GA.......................................................................................................................................25200.051010000
...........................................................................TTTT--TG----------GGCTCGCTT--G--AGTTTGC----------TGG..........................................................................................................................................................................................................................................................................................26200.051010000
.................................................................................................................C----------TGGGCTTGC-TCAGCGGT--CGGCAGA..................................................................................................................................................................................................................................................................25200.051010000
.................................................................................TG----------GGCTCGCTT--G--AGTTTGC----------TGGGC........................................................................................................................................................................................................................................................................................24200.051010000
..................................................TGGGCGCCAGTTGTAACGAACCTGCTTA...........................................................................................................................................................................................................................................................................................................................................28200.051010000
..................................................TGGGCGCCAGTTGTAACGAACC.................................................................................................................................................................................................................................................................................................................................................22200.051100000
............................................................TTGTAACGAACCTGCTTTT--TG----------GG..........................................................................................................................................................................................................................................................................................................................23200.051010000
........................................................................................................G--AGTTTGC----------TGGGCTTGC-TCAGCGG............................................................................................................................................................................................................................................................................24200.051010000
..........................................................AGTTGTAACGAACCTGCTTTT--........................................................................................................................................................................................................................................................................................................................................21200.051010000
...............................................................................................................................................................................................................................................CTTTACTT-------------------------GAATTTCG---------CTTTA------------------------------TT...................................................................................23200.051010000
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-TT.................................................................................................................................................................................................................................................................................21200.051010000
..........................................................AGTTGTAACGAACCTGCTTTT--TG----------G...........................................................................................................................................................................................................................................................................................................................24200.051010000
.....................................................................................................T--G--AGTTTGC----------TGGGCTTGC-TCAG...............................................................................................................................................................................................................................................................................22200.051010000
..............................................................GTAACGAACCTGCTTTT--TG----------GGCTCGC.....................................................................................................................................................................................................................................................................................................................26200.051010000
...............................................................................................................................................................................................................................................CTTTACTT-------------------------GAATTTCG---------CTTTA------------------------------TTCGC................................................................................26200.051010000
.................................................................................TG----------GGCTCGCTT--G--AGTTTGC----------TGGGCTAT.....................................................................................................................................................................................................................................................................................27200.051010000
..............................................................................................................................................................................................................TA-----A---GACTTT---------CCTTT-TCTTTACTT-------------------------.........................................................................................................................................23200.051010000
....................................................................................................TT--G--AGTTTGC----------TGGGCTTGC-TCAGCA.............................................................................................................................................................................................................................................................................25200.051010000
............................................................TTGTAACGAACCTGCTTTT--TG----------GGCTCG......................................................................................................................................................................................................................................................................................................................27200.051001000
.........................................................................................................................................................................................................................................CTTT-TCTTTACTT-------------------------GAATTTCG---------CTT.....................................................................................................................24200.051010000
........................................................CCAGTTGTAACGAACCTGCTTTT--........................................................................................................................................................................................................................................................................................................................................23200.051010000
..........................................................................CTTTT--TG----------GGCTCGCTT--G--AGTTTGC----------TG...........................................................................................................................................................................................................................................................................................26200.051010000
.................................................................................................................................TTGC-TCAGCGGT--CGGCAGATTCGCA-G..........................................................................................................................................................................................................................................................26200.051010000
..............................................................GTAACGAACCTGCTTTT--TG----------G...........................................................................................................................................................................................................................................................................................................................20200.051010000
.........................................................................................................................................................................................................................................CTTT-TCTTTACTT-------------------------GAATTTCG---------C.......................................................................................................................22200.051010000
..........................................................................................................................................................................TATT------GTTGCC-CCCAACG-ACAA..................................................................................................................................................................................................................21200.051010000
.................................................................................................................C----------TGGGCTTGC-TCAGCGGT--CGGCA....................................................................................................................................................................................................................................................................23200.051010000
..................................................................................................................................TGC-TCAGCGGT--CGGCAGATTCGCA-GC.........................................................................................................................................................................................................................................................26200.051010000
............................................................................................................................TGGGCTTGC-TCAGCGGT--CGT......................................................................................................................................................................................................................................................................20200.051010000
.........................................................CAGTTGTAACGAACCTGCTTTT--TG----------G...........................................................................................................................................................................................................................................................................................................................25200.051010000
.................................................................................................CGCTT--G--AGTTTGC----------TGGGCTTGC-TC.................................................................................................................................................................................................................................................................................24200.051010000
..................................................................................G----------GGCTCGCTT--G--AGTTTGC----------TG...........................................................................................................................................................................................................................................................................................20200.051010000
droWil2
-------------------------------------------CACG--TTGGGCGCCAGATGTAACGATCCTTTCTCG--TC--C-------------CTT--TGGATATTTCTGCTATCTCTTGGG------------------CCAGGTTCGGC-ACAACAAAATTTATTT------TGTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................TATTTCTGCTATCTCTTGGG------------------CCAGG..................................................................................................................................................................................................................................................................2578.5760053070
............................................................ATGTAACGATCCTTTCTCG--TC--C-------------CT....................................................................................................................................................................................................................................................................................................................2436.6720018020
............................................................................................................TATTTCTGCTATCTCTTGGG------------------CCAGGT.................................................................................................................................................................................................................................................................2673.8627018090
...................................................................................................................................................CAGGTTCGGC-ACAACAAAATTTATTT------.....................................................................................................................................................................................................................................26173.5961054070
...................................................................................................................................................CAGGTTCGGC-ACAACAAAATTTATTT------TG...................................................................................................................................................................................................................................28143.0042034080
..................................................................................................................TGCTATCTCTTGGG------------------CCAGGTTCGG.............................................................................................................................................................................................................................................................24202.45490320170
.............................................................TGTAACGATCCTTTCTCG--TC--C-------------CT....................................................................................................................................................................................................................................................................................................................23202.2044044000
............................................................................................................TATTTCTGCTATCTCTTGGG------------------CCAG...................................................................................................................................................................................................................................................................2472.1415014010
...................................................................................................................................................CAGGTTCGGC-ACAACAAAATTTATT............................................................................................................................................................................................................................................25171.8832031010
...............................................................................................................TTCTGCTATCTCTTGGG------------------CCAGGTTCGG.............................................................................................................................................................................................................................................................2781.7514011030
............................................................................................................TATTTCTGCTATCTCTTGGG------------------C......................................................................................................................................................................................................................................................................2171.711208040
..................................................................................................................TGCTATCTCTTGGG------------------CCAGGTTCGGC-...........................................................................................................................................................................................................................................................25191.68320220100
............................................................................................................TATTTCTGCTATCTCTTGGG------------------CCA....................................................................................................................................................................................................................................................................2371.14804040
...............................................................................................................TTCTGCTATCTCTTGGG------------------CCAGGTTCG..............................................................................................................................................................................................................................................................2681.13906030
................................................................................................................TCTGCTATCTCTTGGG------------------CCAGGTTCGG.............................................................................................................................................................................................................................................................2681.13908010
.................................................................................TC--C-------------CTT--TGGATATTTCTGCTATCTCT.............................................................................................................................................................................................................................................................................................2621.00202000
.............................................................................................................ATTTCTGCTATCTCTTGGG------------------CCAGG..................................................................................................................................................................................................................................................................2471.00707000
.....................................................................................................................TATCTCTTGGG------------------CCAGGTTCGGC-ACA........................................................................................................................................................................................................................................................25190.8917010070
..................................................................................................................TGCTATCTCTTGGG------------------CCAGGTTCGGC-A..........................................................................................................................................................................................................................................................26190.8917016010
..................................................................................................................TGCTATCTCTTGGG------------------CCAGGTTCGGC-AC.........................................................................................................................................................................................................................................................27180.7814012020
............................................................ATGTAACGATCCTTTCTCG--TC--C-------------CTT--.................................................................................................................................................................................................................................................................................................................2530.67202000
.....................................................................................................................TATCTCTTGGG------------------CCAGGTTCGGC-AC.........................................................................................................................................................................................................................................................24200.6513010030
...............................................................................................................TTCTGCTATCTCTTGGG------------------CCAGGTT................................................................................................................................................................................................................................................................2480.50402020
.............................................................TGTAACGATCCTTTCTCG--TC--C-------------CTT--T................................................................................................................................................................................................................................................................................................................2520.50101000
.....................................................................................................................TATCTCTTGGG------------------CCAGGTTCGGC-A..........................................................................................................................................................................................................................................................23200.501006040
................................................................................................................TCTGCTATCTCTTGGG------------------CCAGGTTCGGC-A..........................................................................................................................................................................................................................................................2880.50403010
...............................................................................................................TTCTGCTATCTCTTGGG------------------CCAGGTTCGGC-...........................................................................................................................................................................................................................................................2880.50402020
..........................................................................TCTCG--TC--C-------------CTT--TGGATATTTCTGC....................................................................................................................................................................................................................................................................................................2420.50101000
..................................................TGGGCGCCAGATGTAACGAG...................................................................................................................................................................................................................................................................................................................................................2020.50101000
...................................................................................................................................................CAGGTTCGGC-ACAACAAAATTTAT.............................................................................................................................................................................................................................................24180.44808000
.............................................................................................................ATTTCTGCTATCTCTTGGG------------------C......................................................................................................................................................................................................................................................................2070.43303000
.............................................................................................................ATTTCTGCTATCTCTTGGG------------------CCAGGT.................................................................................................................................................................................................................................................................2570.43302010
............................................................................................................TATTTCTGCTATCTCTTGGG------------------CCAGGTT................................................................................................................................................................................................................................................................2770.43302010
...................................................................................................................................................CAGGTTCGGC-ACAACAAAATTTATTT------T....................................................................................................................................................................................................................................27160.38606000
...............................................................................................................TTCTGCTATCTCTTGGG------------------CCAGGTTCGGC-A..........................................................................................................................................................................................................................................................2980.38303000
............................................................ATGTAACGATCCTTTCTCG--TC--C-------------C.....................................................................................................................................................................................................................................................................................................................2330.33101000
.....................................................................................................................TATCTCTTGGG------------------CCAGGTTCGGC-ACAA.......................................................................................................................................................................................................................................................26190.32606000
............................................................................................................TATTTCTGCTATCTCTTGG..........................................................................................................................................................................................................................................................................................1970.29201010
.............................................................................................................ATTTCTGCTATCTCTTGGG------------------.......................................................................................................................................................................................................................................................................1970.29202000
..............................................................................................................TTTCTGCTATCTCTTGGG------------------CCAGGTTCGG.............................................................................................................................................................................................................................................................2870.29202000
............................................................................................................................TGGG------------------CCAGGTTCGGC-ACAACAAAATT................................................................................................................................................................................................................................................26150.27404000
................................................................................................................TCTGCTATCTCTTGGG------------------CCAGGT.................................................................................................................................................................................................................................................................2280.25202000
................................................................................................................TCTGCTATCTCTTGGG------------------CCAGGTTCGGC-AC.........................................................................................................................................................................................................................................................2980.25202000
..................................................................................................................TGCTATCTCTTGGG------------------CCAGGTTCGGC-ACA........................................................................................................................................................................................................................................................28160.25403010
.....................................................................................................................TATCTCTTGGG------------------CCAGGTTCGGC-...........................................................................................................................................................................................................................................................22200.25502030
.....................................................................................................................TATCTCTTGGG------------------CCAGGTTCGG.............................................................................................................................................................................................................................................................21200.20402020
..................................................................................................................TGCTATCTCTTGGG------------------CCAGGTTCG..............................................................................................................................................................................................................................................................23200.20404000
........................................................................................................TGGATATTTCTGCTATCTCTTGGG------------------C......................................................................................................................................................................................................................................................................2550.20101000
.....................................................................................................................TATCTCTTGGG------------------CCAGGTTCGGC-ACAAC......................................................................................................................................................................................................................................................27170.18303000
...................................................................................................................GCTATCTCTTGGG------------------CCAGGTTCGGC-...........................................................................................................................................................................................................................................................24190.16303000
.............................................................................................................ATTTCTGCTATCTCTTGGG------------------CCAG...................................................................................................................................................................................................................................................................2370.14101000
..............................................................................................................TTTCTGCTATCTCTTGGG------------------CCAGGTT................................................................................................................................................................................................................................................................2570.14101000
..............................................................................................................TTTCTGCTATCTCTTGGG------------------CCAG...................................................................................................................................................................................................................................................................2270.14101000
..............................................................................................................TTTCTGCTATCTCTTGGG------------------CCAGGTTC...............................................................................................................................................................................................................................................................2670.14101000
..............................................................................................................TTTCTGCTATCTCTTGGG------------------C......................................................................................................................................................................................................................................................................1970.14110000
...........................................................................................................ATATTTCTGCTATCTCTTGGG------------------CCAGGT.................................................................................................................................................................................................................................................................2770.14101000
..........................................................................................................GATATTTCTGCTATCTCTTGGG------------------CCA....................................................................................................................................................................................................................................................................2570.14101000
............................................................................................................TATTTCTGCTATCTCTTGGG------------------CC.....................................................................................................................................................................................................................................................................2270.14101000
............................................................................................................TATTTCTGCTATCTCTTGGG------------------.......................................................................................................................................................................................................................................................................2070.14101000
..............................................................................................................TTTCTGCTATCTCTTGGG------------------CCAGGT.................................................................................................................................................................................................................................................................2470.14101000
............................................................................................................TATTTCTGCTATCTCTTGGG------------------CCAGGTTC...............................................................................................................................................................................................................................................................2870.14101000
...............................................................................................................TTCTGCTATCTCTTGGG------------------CCAGGT.................................................................................................................................................................................................................................................................2380.13101000
...............................................................................................................TTCTGCTATCTCTTGGG------------------CCAGGTTC...............................................................................................................................................................................................................................................................2580.13101000
................................................................................................................TCTGCTATCTCTTGGG------------------CCAGGTT................................................................................................................................................................................................................................................................2380.13101000
...............................................................................................................TTCTGCTATCTCTTGGG------------------CCAGGTTCGA.............................................................................................................................................................................................................................................................2780.13101000
................................................................................................................TCTGCTATCTCTTGGG------------------CCAGGTTCG..............................................................................................................................................................................................................................................................2580.13101000
.................................................................................................................CTGCTATCTCTTGGG------------------CCAGGTTCGGC-...........................................................................................................................................................................................................................................................2680.13101000
...............................................................................................................TTCTGCTATCTCTTGGG------------------CCAGG..................................................................................................................................................................................................................................................................2280.13100010
.................................................................................................................CTGCTATCTCTTGGG------------------CCAGGTTCGG.............................................................................................................................................................................................................................................................2580.13101000
.......................................................................................................................TCTCTTGGG------------------CCAGGTTCGGC-ACAA.......................................................................................................................................................................................................................................................24190.11202000
.......................................................................................................................................................TTCGGC-ACAACAAAATTTATTT------TGTG.................................................................................................................................................................................................................................26200.10202000
...........................................................................................................................TTGGG------------------CCAGGTTCGGC-ACAACAAAATT................................................................................................................................................................................................................................................27150.07101000
............................................................................................................................TGGG------------------CCAGGTTCGGC-ACAACAAAAT.................................................................................................................................................................................................................................................25150.07101000
........................................................................................................................CTCTTGGG------------------CCAGGTTCGGC-ACAACA.....................................................................................................................................................................................................................................................25160.06101000
......................................................................................................................ATCTCTTGGG------------------CCAGGTTCGGC-ACAACA.....................................................................................................................................................................................................................................................27160.06101000
.......................................................................................................................TCTCTTGGG------------------CCAGGTTCGGC-ACAACA.....................................................................................................................................................................................................................................................26160.06101000
.......................................................................................................................TCTCTTGGG------------------CCAGGTTCGGC-ACAACAT....................................................................................................................................................................................................................................................27160.06101000
......................................................................................................................ATCTCTTGGG------------------CCAGGTTCGGC-ACAAC......................................................................................................................................................................................................................................................26170.06101000
....................................................................................................................CTATCTCTTGGG------------------CCAGGTTCGGC-ACAAC......................................................................................................................................................................................................................................................28170.06101000
...................................................................................................................................................CAGGTTCGGC-ACAACAAAATTTA..............................................................................................................................................................................................................................................23180.06100010
...................................................................................................................GCTATCTCTTGGG------------------CCAGGTTCGGC-AC.........................................................................................................................................................................................................................................................26180.06101000
.....................................................................................................................TATCTCTTGGG------------------CCAGGTTCGGC-ACAACT.....................................................................................................................................................................................................................................................28180.06101000
.....................................................................................................................TATCTCTTGGG------------------CCAGGTTCGGC-ACAT.......................................................................................................................................................................................................................................................26190.05100010
..................................................................................................................TGCTATCTCTTGGG------------------CCAGGTTCGGC-AT.........................................................................................................................................................................................................................................................27190.05101000
.......................................................................................................................TCTCTTGGG------------------CCAGGTTCGGC-ACA........................................................................................................................................................................................................................................................23190.05101000
...................................................................................................................GCTATCTCTTGGG------------------CCAGGTTCGGC-A..........................................................................................................................................................................................................................................................25190.05101000
...................................................................................................................................................CAGGTTCGGC-ACAACAAAATT................................................................................................................................................................................................................................................21190.05100010
.............................................................TGTAACGATCCTTTCTCG--TC--C-------------C.....................................................................................................................................................................................................................................................................................................................22200.05100010
..............................................................GTAACGATCCTTTCTCG--TC--C-------------CT....................................................................................................................................................................................................................................................................................................................22200.05100010
....................................................................................................................CTATCTCTTGGG------------------CCAGGTTCGG.............................................................................................................................................................................................................................................................22200.05101000
...................................................................................................................GCTATCTCTTGGG------------------CCAGGTTCG..............................................................................................................................................................................................................................................................22200.05101000
......................................................................................................................ATCTCTTGGG------------------CCAGGTTCGG.............................................................................................................................................................................................................................................................20200.05101000
..................................................................................................................TGCTATCTCTTGGG------------------CCAGGTT................................................................................................................................................................................................................................................................21200.05101000
.............................................................TGTAACGATCCTTTCTCG--T.......................................................................................................................................................................................................................................................................................................................................19200.05101000
.......................................................................................................................TCTCTTGGG------------------CCAGGTTCGG.............................................................................................................................................................................................................................................................19200.05101000
...................................................................................................................GCTATCTCTTGGG------------------CCAGGTTCGG.............................................................................................................................................................................................................................................................23200.05101000
.......................................................................................................................TCTCTTGGG------------------CCAGGTTCGGC-AC.........................................................................................................................................................................................................................................................22200.05101000
....................................................................................................................CTATCTCTTGGG------------------CCAGGTTCGGC-A..........................................................................................................................................................................................................................................................24200.05101000
droVir3
TCG-----------------------------------GACCCCACG--TTGGGCGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................CCCACG--TTGGGCGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------162032.9065800000000000000000000000000000000000000000000102022300033292951290000
TCG-----------------------------------GACCCCACG--TTGGGCGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------22123.00230000000000000011021000180000000000000000000000000000000000000000
.........................................CCCACG--TTGGGCGCC...............................................................................................................................................................................................................................................................................................................................................................152013.6027200000000000000000000000000000000000000000000030050100101198810380007
........................................CCCCACG--TTGGGCGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------172010.95219000000000000000000000000000000000000000000101000007024000013000191
........................................CCCCACG--TTGGGCGCC...............................................................................................................................................................................................................................................................................................................................................................16205.451090000000000000000000000000000000000000000023200009013001919004200000
..........................................CCACG--TTGGGCGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------15200.5511000000000000000000000000000000000000000001040020000103000000000
.......................................ACCCCACG--TTGGGCGCC...............................................................................................................................................................................................................................................................................................................................................................1760.503000000000000000000000000000000000000000000000000000000000000003
........................................CCCCACG--TTGGGCGC................................................................................................................................................................................................................................................................................................................................................................15200.204000000000000000000000000000000000000000000000000000000022000000
droMoj3
G-------------------------------------GGCCCCACG--TTGGGCGCCAGTTGTAACGAACCTTCGG----TT--TA--T-----CCCGAG------TCTAAGC----------TGGGCTAGTTTCAGCTGA--CTGTGGATTCGTTGCCAACAAATTTATTTG------TTGAAGCCCCTGCG-ATAA---TTAATT-----A---GTCTTG---------TG-GT-TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTATATTTTCTTAAATA-------AAT--------------------------------------------ATGC----AA---------------------TGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................TAACGAACCTTCGG----TT--TA--T-----CCCGAG------T.............................................................................................................................................................................................................................................................................................................26204.85979700000
............................................................TTGTAACGAACCTTCGG----TT--TA--T-----CCCGA.....................................................................................................................................................................................................................................................................................................................27203.15630000630
............................................................TTGTAACGAACCTTCGG----TT--TA--T-----CCC.......................................................................................................................................................................................................................................................................................................................25202.90580100570
.....................................................................................................................................................GATTCGTTGCCAACAAATTTATTTG------T....................................................................................................................................................................................................................................26202.15430410002
...............................................................TAACGAACCTTCGG----TT--TA--T-----CCCGAG------TC............................................................................................................................................................................................................................................................................................................27202.05410000410
............................................................TTGTAACGAACCTTCGG----TT--TA--T-----CCCGAG------T.............................................................................................................................................................................................................................................................................................................29201.65333300000
........................................................................................................................................................................................................................................TG-GT-TTAG-GTTT------------------------------------TATAG----------CGCAGTGG.......................................................................................................25201.55312510014
..............................................................................................................................................................................................TGCG-ATAA---TTAATT-----A---GTCTTG---------TG-GT-TT.........................................................................................................................................................................27201.15232300000
.....................................................................................................................................................GATTCGTTGCCAACAAATTTATTTG------.....................................................................................................................................................................................................................................25201.10220220000
.........................................................................................................................................................................................................................GTCTTG---------TG-GT-TTAG-GTTT------------------------------------TATAG----------CGC............................................................................................................26201.00201360001
...............................................................................................................................................................................................GCG-ATAA---TTAATT-----A---GTCTTG---------TG-G.............................................................................................................................................................................23200.95191900000
...............................................................TAACGAACCTTCGG----TT--TA--T-----CCCG......................................................................................................................................................................................................................................................................................................................23200.95191900000
.......................................................................................................................................................TTCGTTGCCAACAAATTTATTTG------T....................................................................................................................................................................................................................................24200.80160000160
......................................................................................................................................................ATTCGTTGCCAACAAATTTATTTG------T....................................................................................................................................................................................................................................25200.70141400000
......................................................................................................................................................ATTCGTTGCCAACAAATTTATTTG------.....................................................................................................................................................................................................................................24200.60121200000
.....................................................................................................................................TTCAGCTGA--CTGTGGATTCGTTGCC.........................................................................................................................................................................................................................................................25200.55110100100
.............................................................TGTAACGAACCTTCGG----TT--TA--T-----CCCGAG------T.............................................................................................................................................................................................................................................................................................................28200.5010500050
..............................................................................................................................................................................................TGCG-ATAA---TTAATT-----A---GTCTTG---------.................................................................................................................................................................................21200.50101000000
........................................................................................................................................................................................................................................TG-GT-TTAG-GTTT------------------------------------TATAG----------CGCAGTGGT......................................................................................................26200.459800001
....................................................................................................................................................................................................................................................TTT------------------------------------TATAG----------CGCAGTGGTATATTTTCT.............................................................................................26200.459610020
...............................................................................................................................................................................................................................................TAG-GTTT------------------------------------TATAG----------CGCAGTGGTATAT..................................................................................................25200.459600021
............................................................TTGTAACGAACCTTCGG----TT--TA--T-----CCCGAG------A.............................................................................................................................................................................................................................................................................................................29200.408000080
............................................................................................................................................................................................................................................T-TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTA.....................................................................................................24200.357100051
.........................................................................................................................................................................................................................GTCTTG---------TG-GT-TTAG-GTTT------------------------------------TATAG----------C..............................................................................................................24200.357000070
............................................................TTGTAACGAACCTTCGG----TT--TA--T-----C.........................................................................................................................................................................................................................................................................................................................23200.306600000
...............................................................................................................................................................................................................................................TAG-GTTT------------------------------------TATAG----------CGCAGTGGTATA...................................................................................................24200.306500001
............................................................TTGTAACGAACCTTCGG----TT--TA--T-----CCCGAG------C.............................................................................................................................................................................................................................................................................................................29200.306000060
.............................................................................................................................................................................................CTGCG-ATAA---TTAATT-----A---GTCTTG---------TG-G.............................................................................................................................................................................25200.255500000
....................................................................................................................................................................................................................................................TTT------------------------------------TATAG----------CGCAGTGGTATATTTTC..............................................................................................25200.255400010
..............................................................................................................................................................................................TGCG-ATAA---TTAATT-----A---GTCTTG---------TG-GT-...........................................................................................................................................................................25200.255050000
........................................................................................................................................................................................................................................TG-GT-TTAG-GTTT------------------------------------TATAG----------CGCAGT.........................................................................................................23200.204400000
..............................................................................................................................................................................................TGCG-ATAA---TTAATT-----A---GTCTTG---------TG-GT-TTA........................................................................................................................................................................28200.204400000
............................................................................................................................TGGGCTAGTTTCAGCTGA--CTGTGGAT.................................................................................................................................................................................................................................................................26200.204400000
....................................................................................................................................................................................................................................................TTT------------------------------------TATAG----------CGCAGTGGTATATTTT...............................................................................................24200.204000040
..............................................................................................................................................................................................................................................TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTATAT..................................................................................................26200.204400000
..............................................................................................................................................................................................TGCG-ATAA---TTAATT-----A---GTCTTG---------TG-G.............................................................................................................................................................................24200.204040000
.........................................................................................................................................................................................................................................G-GT-TTAG-GTTT------------------------------------TATAG----------CGCAGTGG.......................................................................................................24200.204400000
............................................................................................................................................................................................................................................T-TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTATAT..................................................................................................27200.204200002
........................................................................TTCGG----TT--TA--T-----CCCGAG------TCTAAGC----------TGGG.........................................................................................................................................................................................................................................................................................27200.153300000
.................................................................................TT--TA--T-----CCCGAG------TCTAAGC----------TGGGCTAGT....................................................................................................................................................................................................................................................................................27200.153300000
................................................................................................................................................................................................................................................AG-GTTT------------------------------------TATAG----------CGCAGTGGTATATTT................................................................................................26200.153000030
...............................................................................................................................................................................................................................................TAG-GTTT------------------------------------TATAG----------CGCAGTGGTAT....................................................................................................23200.153300000
.........................................................................................................................................................................................................................GTCTTG---------TG-GT-TTAG-GTTT------------------------------------TATAG----------CGCAG..........................................................................................................28200.153300000
...............................................................................................................................................................................................................................................TAG-GTTT------------------------------------TATAG----------CGCAGTGGTATATTT................................................................................................27200.153200010
................................................................................................................................................................................................................................................AG-GTTT------------------------------------TATAG----------CGCAGTGGTATATT.................................................................................................25200.153100020
..............................................................................................................................................................................................................................................TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTAT....................................................................................................24200.153200010
.................................................................................TT--TA--T-----CCCGAG------TCTAAGC----------TGGGCTAGTT...................................................................................................................................................................................................................................................................................28200.153000030
....................................................................................................................................................................................................................................................TTT------------------------------------TATAG----------CGCAGTGGTATATTTTCTT............................................................................................27200.153000012
..............................................................................................................................................................................................................................................TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTA.....................................................................................................23200.153100020
....................................................................................................................................................GGATTCGTTGCCAACAAATTTATTT............................................................................................................................................................................................................................................25200.153300000
...................................................................................................................................................TGGATTCGTTGCCAACAAATTTATT.............................................................................................................................................................................................................................................25200.153200010
............................................................................................................................................................................................................................................T-TTAG-GTTT------------------------------------TATAG----------CGCAGTGGT......................................................................................................23200.153300000
...........................................................................................................................................TGA--CTGTGGATTCGTTGCCAACA.....................................................................................................................................................................................................................................................23200.153300000
.................................................................................TT--TA--T-----CCCGAG------TCTAAGC----------TGGGC........................................................................................................................................................................................................................................................................................23200.153000030
.........................................................................................................................................................................................................................................................................................................................TCTTAAATA-------AAT--------------------------------------------ATGC----AA---------------------TG2080.131100000
..........................................................AGTTGTAACGAACCTTCGG----TT--....................................................................................................................................................................................................................................................................................................................................21200.102200000
G-------------------------------------GGCCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................20200.102020000
...............................................................TAACGAACCTTCGG----TT--TA--T-----CCCGAG------TCC...........................................................................................................................................................................................................................................................................................................28200.102000020
........................................................................................................................................................................................................................................TG-GT-TTAG-GTTT------------------------------------TATAG----------CGCAGTG........................................................................................................24200.102200000
........................................................................................................................................................................................................................................TG-GT-TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTA.....................................................................................................27200.102000011
......................................................................................................................................TCAGCTGA--CTGTGGATTCGTTGCCAAC......................................................................................................................................................................................................................................................27200.102200000
........................................................................................................................................................TCGTTGCCAACAAATTTATTTG------TTGAA................................................................................................................................................................................................................................27200.102000020
.......................................................................................................................................................TTCGTTGCCAACAAATTTATTTG------TTG..................................................................................................................................................................................................................................26200.102200000
.............................................................................................................................................................................................CTGCG-ATAA---TTAATT-----A---GTCTTG---------TG-GT-T..........................................................................................................................................................................27200.102200000
................................................................................................................................................................................................CG-ATAA---TTAATT-----A---GTCTTG---------TG-G.............................................................................................................................................................................22200.102200000
..........................................................................................................................................................................................................TTAATT-----A---GTCTTG---------TG-GT-TTAG-GT....................................................................................................................................................................23200.102200000
.............................................................TGTAACGAACCTTCGG----TT--TA--T-----CCCGA.....................................................................................................................................................................................................................................................................................................................26200.102000020
...............................................................................................................................................................................................................................................TAG-GTTT------------------------------------TATAG----------CGCAGTGGTA.....................................................................................................22200.102000020
................................................................................................................................................................................................................................................AG-GTTT------------------------------------TATAG----------CGCAGTGGTATAT..................................................................................................24200.102110000
..............................................................................................................................................................................................................TT-----A---GTCTTG---------TG-GT-TTAG-GTTT------------------------------------TATAG----------C..............................................................................................................27200.102000011
..........................................................................................................................................................................................CCCCTGCG-ATAA---TTAATT-----A---GTCTTG---------.................................................................................................................................................................................25200.102200000
.......................................................................................................................................CAGCTGA--CTGTGGATTCGTTG...........................................................................................................................................................................................................................................................21200.102100001
........................................................................................................................................................................................................................................TG-GT-TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTT.....................................................................................................27200.102010001
......................................................................................................................................................................................................................................................T------------------------------------TATAG----------CGCAGTGGTATATTTTCT.............................................................................................24200.102100010
....................................................................AACCTTCGG----TT--TA--T-----CCCGAG------T.............................................................................................................................................................................................................................................................................................................21200.102200000
..................................................................................................GAG------TCTAAGC----------TGGGCTAGTTTCAGC..............................................................................................................................................................................................................................................................................25200.102000020
...........................................................................................................TCTAAGC----------TGGGCTAGTTTCAGC..............................................................................................................................................................................................................................................................................22200.102200000
..........................................................................................................................................................................................................TTAATT-----A---GTCTTG---------TG-GT-TTAG-GTT...................................................................................................................................................................24200.102100010
............................................................................................................CTAAGC----------TGGGCTAGTTTCAGCTGA--CTG......................................................................................................................................................................................................................................................................27200.102200000
.....................................................................................................................................................................................TGAAGCCCCTGCG-ATAA---TTAATT-----A---GTCT............................................................................................................................................................................................28200.102200000
.......................................................................CTTCGG----TT--TA--T-----CCCGAG------TC............................................................................................................................................................................................................................................................................................................19200.051100000
...........................................................................................................TCTAAGC----------TGGGCTAGTTTCAGCC.............................................................................................................................................................................................................................................................................23200.051000010
..........................................................................CGG----TT--TA--T-----CCCGAG------TCTAAGC----------TGGGC........................................................................................................................................................................................................................................................................................26200.051000010
.........................................................................................................................................................................................................................GTCTTG---------TG-GT-TTAG-GTTT------------------------------------TATAG----------CG.............................................................................................................25200.051000001
...........................................................................................................................................................................................................................................GT-TTAG-GTTT------------------------------------TATAG----------CGCA...........................................................................................................19200.051100000
......................................................................................................................................TCAGCTGA--CTGTGGATTCGTTGCC.........................................................................................................................................................................................................................................................24200.051100000
..................................................................CGAACCTTCGG----TT--TA--T-----CCCGAG------T.............................................................................................................................................................................................................................................................................................................23200.051000010
..............................................................................................................................................................................................................................................................................................AG----------CGCAGTGGTATATTTTCTTAAATA-------................................................................................26200.051000010
..............................................................................................................................................................................................................................................TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTATATC.................................................................................................27200.051000010
................................................................AACGAACCTTCGG----TT--TA--T-----CCCGAG------..............................................................................................................................................................................................................................................................................................................24200.051000010
.........................................................................................................................................GCTGA--CTGTGGATTCGTTGCCAACAAA...................................................................................................................................................................................................................................................27200.051000010
................................................................................................................................................................................................................................................AG-GTTT------------------------------------TATAG----------CGCAGTGGTATA...................................................................................................23200.051100000
......................................................................................................................................................................................GAAGCCCCTGCG-ATAA---TTAATT-----A---................................................................................................................................................................................................23200.051100000
......................................................................................................................................................................................................................................................T------------------------------------TATAG----------CGCAGTGGTATATTTTCTT............................................................................................25200.051100000
.....................................................................................................................................................GATTCGTTGCCAACAAATT.................................................................................................................................................................................................................................................19200.051000001
........................................................................................................................................................................................................................................TG-GT-TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTAT....................................................................................................28200.051000001
...............................................................................................................................................................................................GCG-ATAA---TTAATT-----A---GTCTTG---------TG-GT-TTC........................................................................................................................................................................27200.051100000
....................................................................................................................................................................................................TAA---TTAATT-----A---GTCTTG---------TG-GT-T..........................................................................................................................................................................21200.051000010
................................................................................................................................................CTGTGGATTCGTTGCCAACAAATT.................................................................................................................................................................................................................................................24200.051100000
..................................................................................T--TA--T-----CCCGAG------TCTAAGC----------TGGGCTAGT....................................................................................................................................................................................................................................................................................26200.051000010
.................................................................................................................C----------TGGGCTAGTTTCAGCTGA--CTGTGGAT.................................................................................................................................................................................................................................................................27200.051100000
..........................................................................................................................................................................................CCCCTGCG-ATAA---TTAATT-----A---GTCTTG---------TG-G.............................................................................................................................................................................28200.051100000
..............................................................................................................................................................................................................................................TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTATATTT................................................................................................28200.051000010
.....................................................................................TA--T-----CCCGAG------TCTAAGC----------TGGGCTAGTTT..................................................................................................................................................................................................................................................................................27200.051000010
..............................................................................................................................................................................................TGCG-ATAA---TTAATT-----A---GTCTTG---------G................................................................................................................................................................................22200.051100000
..................................................................................................................................AGTTTCAGCTGA--CTGTGGATTCGTT............................................................................................................................................................................................................................................................25200.051100000
..............................................................................................................................................................................................................................G---------TG-GT-TTAG-GTTT------------------------------------TATAG----------CGCAGTGG.......................................................................................................26200.051100000
...................................................................................................................................................................................................................................................GTTT------------------------------------TATAG----------CGCAGTGGTATATTTTC..............................................................................................26200.051100000
..........................................................................................................................................................................................CCCCTGCG-ATAA---TTAATT-----A---GTCT............................................................................................................................................................................................23200.051100000
..................................................TGGGCGCCAGTTGTAACGAACC.................................................................................................................................................................................................................................................................................................................................................22200.051000010
.......................................................................................................................................CAGCTGA--CTGTGGATTCGTTGCCAAC......................................................................................................................................................................................................................................................26200.051000010
..........................................................................................................................................................................................................TTAATT-----A---GTCTTG---------TG-GT-TTAG-GTTT------------------------------------..............................................................................................................................25200.051100000
............................................................................................................................................................................................................................TTG---------TG-GT-TTAG-GTTT------------------------------------TATAG----------CGC............................................................................................................23200.051010000
..............................................................................................................................................................................................TGCG-ATAA---TTAATT-----A---GTCTTG---------T................................................................................................................................................................................22200.051100000
..............................................................................................................................................................................................................TT-----A---GTCTTG---------TG-GT-TTAG-GTTT------------------------------------..............................................................................................................................21200.051000010
..............................................................................................................................................................................................................................................TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTATATT.................................................................................................27200.051100000
...............................................................................................................................................................................................GCG-ATAA---TTAATT-----A---GTCTTG---------TG-GT-C..........................................................................................................................................................................25200.051000010
............................................................................................................................................GA--CTGTGGATTCGTTGCCAACAAATT.................................................................................................................................................................................................................................................26200.051100000
...............................................................................................CCCGAG------TCTAAGC----------TGGGCTAGTTTCAG...............................................................................................................................................................................................................................................................................27200.051100000
............................................................................................................CTAAGC----------TGGGCTAGTTTCAGCT.............................................................................................................................................................................................................................................................................22200.051100000
...........................................................................................................................................TGA--CTGTGGATTCGTTGCCAAC......................................................................................................................................................................................................................................................22200.051100000
.....................................................................................................................................................................................................................................................TT------------------------------------TATAG----------CGCAGTGGTATATTTTCTTAAA.........................................................................................29200.051000001
.......................................GCCCCACG--TTGGGCGCCA..............................................................................................................................................................................................................................................................................................................................................................18200.051010000
.............................................................................................................................................................................................................................................................................................TAG----------CGCAGTGGTATATTTTCTTAAAT........................................................................................26200.051100000
...........................................................................................................................................................................................................................................................................................TATAG----------CGCAGTGGTATATTTTCTTAA..........................................................................................26200.051000001
...............................................................TAACGAACCTTCGG----TT--TA--T-----CCCGAG------A.............................................................................................................................................................................................................................................................................................................26200.051100000
.................................................................................................................................................................................................G-ATAA---TTAATT-----A---GTCTTG---------TG-G.............................................................................................................................................................................21200.051100000
............................................................................................................................................................................................................................................................................................ATAG----------CGCAGTGGTATATTTTCC.............................................................................................22200.051000010
......................................................................................................................................................ATTCGTTGCCAACAAATTTATTTG------TTGAA................................................................................................................................................................................................................................29200.051000010
.............................................................................................................................................................................................................................................................................................TAG----------CGCAGTGGTATATTTTCTTAAATA-------AA..............................................................................29200.051000001
...........................................................................................................TCTAAGC----------TGGGCTAGTTTC.................................................................................................................................................................................................................................................................................19200.051010000
..................................................TGGGCGCCAGTTGTAACGAACCTTC..............................................................................................................................................................................................................................................................................................................................................25200.051100000
.............................................................................................................TAAGC----------TGGGCTAGTTTCAGC..............................................................................................................................................................................................................................................................................20200.051100000
.....................................................................................................................................TTCAGCTGA--CTGTGGATTCGTTG...........................................................................................................................................................................................................................................................23200.051100000
..................................................TGGGCGCCAGTTGTAACGAACCTTCGG----........................................................................................................................................................................................................................................................................................................................................27200.051100000
............................................................................................................................................GA--CTGTGGATTCGTTGCCAAC......................................................................................................................................................................................................................................................21200.051100000
.....................................................................................................................................................................................................................................................TT------------------------------------TATAG----------CGCAGTGGTATAT..................................................................................................20200.051010000
.................................................TTGGGCGCCAGTTGTAACGAACC.................................................................................................................................................................................................................................................................................................................................................23200.051000010
.....................................................................................................................................................................................................................................................TT------------------------------------TATAG----------CGCAGTGGTATATTTTC..............................................................................................24200.051100000
...........................................................................................................................................TGA--CTGTGGATTCGTTGCCAACAAA...................................................................................................................................................................................................................................................25200.051000001
......................................................................................................................................................................................................................................................T------------------------------------TATAG----------CGCAGTGGTATATTTTCTTA...........................................................................................26200.051100000
..............................................................................................................................................................................................TGCG-ATAA---TTAATT-----A---GTCTTG---------TG-GT-A..........................................................................................................................................................................26200.051100000
.................................................TTGGGCGCCAGTTGTAACGAACCTT...............................................................................................................................................................................................................................................................................................................................................25200.051000001
.......................................................................................................................................CAGCTGA--CTGTGGATTCGTTGCC.........................................................................................................................................................................................................................................................23200.051000010
...............................................................................................................................GCTAGTTTCAGCTGA--CTGTGGATTCG..............................................................................................................................................................................................................................................................26200.051100000
...........................................................................................................................................TGA--CTGTGGATTCGTTGCCA........................................................................................................................................................................................................................................................20200.051100000
.................................................................................................................................................................................................................................................G-GTTT------------------------------------TATAG----------CGCAGTGGTATATTC................................................................................................25200.051000010
................................................................................................................................................................................................................................................AG-GTTT------------------------------------TATAG----------CGCAGTGGTAT....................................................................................................22200.051100000
........................................................................................................................................AGCTGA--CTGTGGATTCGTTGCCAAC......................................................................................................................................................................................................................................................25200.051000010
............................................................................................................CTAAGC----------TGGGCTAGTTTCAGCTGA--C........................................................................................................................................................................................................................................................................25200.051100000
............................................................................................................CTAAGC----------TGGGCTAGTTTCAGCTGA--CC.......................................................................................................................................................................................................................................................................26200.051000010
............................................................................................................................................................................................................................................T-TTAG-GTTT------------------------------------TATAG----------CGCAGTGG.......................................................................................................22200.051100000
..........................................................................................................................................CTGA--CTGTGGATTCGTTGCC.........................................................................................................................................................................................................................................................20200.051100000
..............................................................................................................................................................................................TGCG-ATAA---TTAATT-----A---GTCTT...........................................................................................................................................................................................20200.051000010
............................................................................................................................................................................................................................................T-TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTATC...................................................................................................26200.051000001
............................................................TTGTAACGAACCTTCGG----TT--TA--................................................................................................................................................................................................................................................................................................................................21200.051000010
..........................................................................................................................................................................TTTG------TTGAAGCCCCTGCG-......................................................................................................................................................................................................................18200.051100000
.......................................................................................................................................................TTCGTTGCCAACAAATTTATTTG------TT...................................................................................................................................................................................................................................25200.051100000
......................................................................................................................................................................TTTATTTG------TTGAAGCCCCTGCG-ATAA---...............................................................................................................................................................................................................26200.051100000
.............................................................................................................................................................................................................ATT-----A---GTCTTG---------TG-GT-TTAG-GTTT------------------------------------TATA..........................................................................................................................26200.051000010
......................................................CGCCAGTTGTAACGAACCTTCGG----T.......................................................................................................................................................................................................................................................................................................................................24200.051100000
...........................................CACG--TTGGGCGCCAGTTGTAACGAAC..................................................................................................................................................................................................................................................................................................................................................26200.051010000
....................................................................................................G------TCTAAGC----------TGGGCTAGTTTCAGC..............................................................................................................................................................................................................................................................................23200.051100000
.........................................CCCACG--TTGGGCGCCAGTTGTAACGAACC.................................................................................................................................................................................................................................................................................................................................................29200.051000010
..............................................................................................................................................................................................TGCG-ATAA---TTAATT-----A---GTCT............................................................................................................................................................................................19200.051000010
....................................................................................................................................................................................................................................................TTT------------------------------------TATAG----------CGCAGTGGTATATTT................................................................................................23200.051000010
............................................................................................................................................................................................................................................T-TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTATA...................................................................................................26200.051100000
............................................................................................................................................................................................................................................T-TTAG-GTTT------------------------------------TATAG----------CGCAGTGGTATATT.................................................................................................28200.051000001

Generated: 05/17/2015 at 11:32 PM