ID:

dya_826

 Coordinate:

3L:19383655-19383805 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dyak_GLEANR_6041:3]; CDS [Dyak\GE22359-cds]; intron [Dyak\GE22359-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGATAATGCGGCGAAGTAAACTGGGGCCCATTGAAAGCGACAATGGAACGGTGAGTGGAATATTCGTTTAATTGAAATAGCTTTAAGTGTTATTTAAAAATTAAGCTAATTACCTAATTATACACGTTACTACACTACAACAGACAGAAGGACGCGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGGCCATGTCCGTCCGTCTGTCCGTCTGTCTGTCCGTCC
**************************************************(((.((((((.(((.((((((((.(((((((.......)))))))...)))))))).)))...........((.((((......((.....)).......)))).)))))).))))).................(((((....)))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528802
follicle cells		 V058
head
 M056
embryo
 M043
female body
 M026
head
 V046
embryo
 V120
male body
........................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGTCGATC....................................... 28 0 20 4.85 97 97 0 0 0 0 0 0
...CAATGCGGCGAAGTAGATTGG................................................................................................................................................................................................................................... 21 3 4 0.50 2 0 2 0 0 0 0 0
...............................................................................................................................................................................TATATATTCTTGATCAGGATCAATAGCC................................................ 28 0 20 0.15 3 0 0 3 0 0 0 0
.............................................................................................................................................................................................................GTCGATCTGGCCATGTCCG........................... 19 0 20 0.15 3 0 0 0 3 0 0 0
..................................................................................................................................................................................................................TCTGGCCATGTCCGTCCGTCT.................... 21 0 20 0.05 1 0 0 0 1 0 0 0
..................................................................................................................................................................................................................TCTGGCCATGTCCGTCCGTCTGAC................. 24 1 20 0.05 1 0 0 1 0 0 0 0
............................................................................................................................................................................................................................TCCGTCCGTCTGTCCGTCTGTCT........ 23 0 20 0.05 1 0 0 0 0 0 1 0
................................................................................................................................................................................................GATCAATAGCCGAGTCGATCTGGCCAT................................ 27 0 20 0.05 1 0 0 0 0 1 0 0
..........................................................................................................................................................................................................CGAGTCGATCTGGCCATGTCCGTCC........................ 25 0 20 0.05 1 0 0 1 0 0 0 0
...........................................................................................................................................................................................ATCAGGATCAATAGCCGAGTCG.......................................... 22 0 20 0.05 1 0 0 0 0 0 0 1

Anti-sense strand reads

CCTATTACGCCGCTTCATTTGACCCCGGGTAACTTTCGCTGTTACCTTGCCACTCACCTTATAAGCAAATTAACTTTATCGAAATTCACAATAAATTTTTAATTCGATTAATGGATTAATATGTGCAATGATGTGATGTTGTCTGTCTTCCTGCGCAAAGGCTGGTATATTTCATATATATAAGAACTAGTCCTAGTTATCGGCTCAGCTAGACCGGTACAGGCAGGCAGACAGGCAGACAGACAGGCAGG
**************************************************(((.((((((.(((.((((((((.(((((((.......)))))))...)))))))).)))...........((.((((......((.....)).......)))).)))))).))))).................(((((....)))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V046
embryo
 V052
head
 M026
head
 V120
male body
..................................................................................................................................................CTTCCTGCGCAAAGGCTGGTA.................................................................................... 21 0 5 0.20 1 1 0 0 0 0
.....GATACCGCTTCATTTGACCCC................................................................................................................................................................................................................................. 21 3 5 0.20 1 0 0 1 0 0
..................................................................................................................................................CTTCCTGCGCAAAGGCTGGTATAT................................................................................. 24 0 5 0.20 1 0 1 0 0 0
...........................................................................................................................................................................................TAGTCCTAGTTATCGGCTCAGCT......................................... 23 0 20 0.15 3 0 0 0 3 0
.................................................................................................................................................................................................................TAGACCGGTACAGGCAGGCAGACAG................. 25 0 20 0.05 1 0 0 0 0 1
......................................................................................................................................................................................................ATCGGCTCAGCTAGACCGGTACAGG............................ 25 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3L:19383605-19383855 + dya_826 GGATAATGCG---------------GCGAA--GTAAACTGG----GGCCCATTG------------AAA---------------GCGACA------ATGG------------------------------------------------AACGG----TGAGTGGAA----------------TATTCG--TTTAATTGAAATAGCTTTAAGTG-------------------------------------------------------------------------------------------------TTATTTA-----------------AAAATTAAGCTAATTA---------------------------------------------------------------------CCTAAT-TATAC--AC-----------------------GTTA----CTACACTACAACAGACAGAAGGACG-CGTTTCCGACCATATAAAGT----ATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGGCCATGTCCGTCCGTCTGTCCGTCT------------GTCTGTCC--------GTCC
droEre2 scaffold_4784:25099275-25099494 + GCC-------------------CATTC---------------------T----A------------AGG-G--------------CCACA------ATCA---------------------CAA-------TGTTAA----------------------------A----------------TTTTCT--TTTCATTTTA--------------------------------------------------------------------------------------------------------------------------------------ATATTTA---------------TACTCGTTACTCGTAGAGTAAAAAGTATGTAACAG-GGCAGGATTCAC-------------TTAATAAA-TAT------------------------ATATGTATA----TGAAAATGTAACAGGGAGAAGGATA-CGTTTCCGACCATATAAAGT----ATGTATATTCTTGATCGGGATCAATAGCTGAGTCGATTTGGCCATGTCCGTC---------------------------------------------
droSec2 scaffold_39:324067-324329 + GGATAA---------------------------------------G-------------------------TCCGAATCATCAAACTTCT------AA-----T------GCAA-TTAACAAG-----GAATGGTGTT---GTTCTGAAAAAA----G-------------------------------------TGTGGACGTGATTTCAT----------------------------------GAAAAC--------------------------------------------------TTTAAGTCAGATCTCAT---------------TT---------------TGTTATACCCATTAGTCGTAGAGT---------------------------------------------------------------AAAAGGGTATACTAGATTCGTTGA----AAAGTATGTAACAGGCAGAAGAAAG-CGTTACCCACCATATTACGT----ATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGGCCATGTC-ATCTGTCCGTCC--------------------------------GGCC
droSim2 4:531323-531531 - TGG-------------------AATT-----------------------CATTT------------ATA---------------ATAATA------GTG-----------------------------GAATAGTTCTTTAAATTTGAACCAA----G-------------------------------------TTTGAACCTGCTTAAGTG-------------------------------TTTATAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGAACAGATTTACTAGATTCGTTGA----AAAGTGTGTAACATGCAGAAGGAAG-CGTTT-CGACCATATATAGTACATATATATATTCTTGATCAGTATCAACAGGCGAGTCGCTTTGGAGATGTCCTTCTGTCC----------------------------------------
dm3 chrU:4053283-4053482 - TTG--ATGGA---------------GG--------------------------G------------AATAGCA----CTAAGGAT------------------------------------------CGA----------------------------------------------------------------------CCACTATTTAATAAA--------T-----------------------ATAGA--------------------------------------------------GGTAAG--------AATG--------------ATTTTAA---------------TACACCTTACTCGACGTGT---------------------------------------------------------------AAAAGGGTATTCTAGATT----------------AGTAACAGGCAGAAGGACCAGAATGACAACCATAC-AAGT----ATATATATGCTTGATCAGGATCAATATCCGAGTTGATCTGACAATGTCCGTCTGTCC----------------------------------------
droEug1 scf7180000409859:14737-14996 + GCG-------------------CAATA--------------------------A------------AATGGCA----TTAAAAATCT----------------------------------------------------------------------TAAATGCAA---------------------------------------------------------TATTG----------------AGCATAAG--------------------------------------------------GTTTGTTTTTAAATA-----------------GTGTCAAACTTATTTAT-ATTTTACCCTTTACTCGTAGAAT----------------------------------------------------------------AAAAGGTATGCAAAATTCGTTGA----TAAGTATGTAACAGATAGAAGGAAG-CGTTTCCAACCCTATAAAGT----ATATATATTCTTAATCAGGATCAATAGCGAAGTCGATTGAGCCATGTCCGTCTGTCCGTCCGTTCGTCCGTTCTTCCGTCCGTCC--------GTCC
droBia1 scf7180000302025:20717-20936 + GAA-------------------AAGTA--------------------------A-----------------------------------A------ACGAAACGAAAAGT-----------------GAA-------------------ACGA----TTCA-----------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------TTACGTCAATTAT-TTTATT-------G-----------------AATTATTGTA-----------CAATGGCGAAAATCAGCTGTTTTATAC--CCTTG----------------------CA----AAAGTTTGCAAGGCTGTAAAGGAGA-CGTTTTCGAGCCCATAAAGT----ATGTATATTCTTGATCTGCGTCACTAGGCGAGTCGATCTAGCGATGTCCGTCTGTCCGTCCGTCT------------GTCTGCCC--------GT--
droTak1 scf7180000413046:6569-6810 + AAC-------------------GATGCCAA--GTATACTCG----GCATTGTAG------------AATCGTA---------------CG-----------------------A-TTAGCA----------------------------------------------------------------TCG--TTACATCGTCAAGGCATTGAATA-------------------------------------------------------------------------------------------------------C-----------------ATTTTTAAAAT------AAT------------------------------------------------------------------------TATAC--CCTTGTAGAGGGTATTATAATTTCAGTCA----GATGTTTGCAACGCAGTGAAGGAGA-CGTTTCCGACCACATAAAGT----ATATATATTCTTGATCAGCACCAATAGCCGAGTCTATCTAGCCATGTCCGTCTGTCCGTCTGTCC------------GTCTGTCC--------GTTT
droEle1 scf7180000491193:2209272-2209525 + GGATAATGCG---------------AAGGA--GTGAACTGG----GTCCATTTG------------ATA---------------GCGAAG------ATGG------------------------------------------------AACGG----TGAGTGCAACTATCTTTTGACTAAA-------------CTATTTC----------------------------------------------------------------------------------------------------------------------TTTTTTAGAAGTCTAT---------------ATT------------------------------------------------------------------------TATAC--CCTTGCAGAGGGTATTATAATTTCAGTCA----GAAGTTTGCAACGCAGTGAAGGAGA-CATCTCCGACCCTATAAAGT----ATATATATTCTTGATCAGCATCACTAGGCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCC------------G----TCC--------GTTT
droRho1 scf7180000779332:9155-9405 - TGG-------------------GG-----------------------C--ACTA------------AAAAAC---------------ACA------ATGGAACTGAAAGT-----------------AA-----------------------T----AGAATGCCA---------------------------------------------------------TACTTTTAAAATGCTTTAAAGGCGGAATCT---------------------------------------------------TA----AGAACTA---------------CACT---------------TAT------------------------------------------------------------------------TATAC--CCGTTAAAAGGGTATATTGTATTCGTGCA----AAAGTATGTAACAGCTAGAAGGAAG-CATTTCCGACCCTATAAAGT----ATATATATTCTTGATCAGGGTCATTAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGTCTGTCC------------GTCTGTCTGTCT----GTCC
droFic1 scf7180000454096:1345879-1346165 + TGGTAATGCA---------------T---------------------------A------------AAG-G--------------CAAGA----------------------------------------------A----------------TGGT-------------------------------TA-----------------------ACGACATTGAAATTTTGAAAATTTTTGAGTAGCTAAATATATAACATAGCCTTCCGGTTAATTAATTTTGCAATTCAAT----------------TCAAATATCATTTTGTTTTGCTACTATT---------------TAT------------------------------------------------------------------------TATACTCTTTATAATACCCTCTTATATTTTCAGTCA----GAAGTTTTCAACGCAGTGAAGGAGA-CACCTCAGACCACATAAAGT----TTATATATTCTTGATCAGCATCAGGATCAGAATCGAAATACGTCTGAACGTCTGTCCGTCTTTCA------------G----------------TC-
droKik1 scf7180000302472:651556-651781 - AGTTGG---------------------------------------AGCCAGTTG------------AGCGGCA---------------AA-------------------------------AGG-------TGAGAA----------------TGGG-------------------------------TA-----------------------TT----TGGGA------------------------------------------------------------------ATTAAGAAAAGGTTTAAG--------AGT---------------TT---------------TTT------------------------------------------------------------------------TATAC--CCTTGC--AGGGTATTATAATTTCAGTCA----GAAGTTTGCAACGCAGTGAAGGAGA-CGTTTCCGACCCTATAAAGT----ATATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCT------------GTCTGTCC--------GTCT
droAna3 scaffold_13099:2601571-2601828 - GGATTCTGCTTTTTAGAAAACTAA---------------------TACCTAATAAGACTATACCTTATA---------------GCTGCA------AT------------ATAAC------------CAG---ACCA----------------TTTG-------------------------------TA-----------------------TT----TTTTA------------------------------------------------------------------ATTTAAAAA----------------ATATTTTATTTGAAATTGGAT---------------TTT------------------------------------------------------------------------TTTAC--CCTTGCAGAGGGTATTATAATTTTGGTCA----AAAGTGTGCGACGCAGTGAAGGAGA-CATCTACGCCCCTACAAAGT----ATATATATTCTTGATCAGGATCACATCCTGAGTCGATATGAGCATATCCGTCTGTCCGTCTGT--------------------------------TT
droBip1 scf7180000396378:203726-204012 + GCA-------------------AAATA--------------------------A-----------------TACGACTAACCAAATTGCC------AT------------ATAACTGAA--CGATCGGAAATGGTATTTGGAATTTCATAAAA----A-------------------------------------TAGCAA----CTTTCGTA-------------------------------TTTTTGAAAATA------------------------------GAAGCT----------------TGGAATATCATTATTTTTAGAT----AT---------------TTT------------------------------------------------------------------------TATAC--CCTTGCAGAGGGTATTATAATTTTGGTCA----AAAGTGTGCAACGCAGTGAAGGAGA-CATCTCCGACCCTATAAAGT----ATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCC------------GTCTGTCT--------GTCC
dp5 Unknown_group_8:23609-23829 + ACT-------------------AA---------------------GACTTATTG------------AAATGCA---------------CA-------------------------------AGG-------TGGTAATTTGTATCTGAAACAA----TTAATGCGA---------------------------------------------------------TATTA----------------TTTATAGC--------------------------------------------------TTTGGTTTTGATTTA-----------------GTTTTTATGTTATTTAT-GTTACA-------CTCA--A------------------------------------------A----------------------------------------------A----TCAGTGTGTAAAGTCCAGAAGGAAG-TGTTTCCGACCCCATAAAGT----ACATATATTCTTGATCAGCATAAATAGCAGAGTCAATTGAGCCATTTCTATCTGTCCGTCC------------------------------------
droPer2 scaffold_106:8970-9190 - ACT-------------------AA---------------------GACTTATTG------------AAATGCA---------------CA-------------------------------AGG-------TGGTAATTTGTATCTGAAACAA----TTAATGCGA---------------------------------------------------------TATTA----------------TTTATAGC--------------------------------------------------TTTGGTTTTGATTTA-----------------GTTTTTATGTTATTTAT-GTTACA-------CTCA--A------------------------------------------A----------------------------------------------A----TCAGTGTGTAAAGTCCAGAAGGAAG-TGTTTCCGACCCCATAAAGT----ACATATATTCTTGATCAGCATAAATAGCCGAGTCAATTGAGCCATTTCTATCTGTCCGTCC------------------------------------
droWil2 scf2_1100000004884:431090-431299 - ATA--ATCCA---------------ACCAA--ATGAACTGT----AGTCGGCTG------------AAA---------------CCGCTT------G---------------------------------------------------TCCAA----TGAATGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTA---------------TACGATACACCCATAGGGT---------------------------------------------------------------GAAATGGTATATTAAAGTCGCCAA----AATGTATGTAACACGCAGAAGGAAG-CTTTTCCGACCCCATAAAGT----ATATATATTCTTGATCAGCAGCAACAGCCGAGTCGATCTAGCCATGTCCGTCCGTCCGTCC------------------------------------
droVir3 scaffold_13042:5110647-5110864 - TAG------------------------------------------GATCTATTG------------AAA---------------GCTATAATCAAAAA-----------------------------CAAACGGTTTTTAATAATAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG--T----------AAATAACAGTA---------------------------------ACAGT--AACAGTAACAGTAATAA--TAATAATACA----AATGTATGTAACAGGCAGAAGGAAG-CATCTCCAACCCCATAAAGT----ATATATATTCTTGATCAGCATCAATAGCCAAGTCGATCTAGCCATGTCCGTCTGTATGTCTATCT------------GTCCGTCC--------GTAT
droMoj3 scaffold_6295:3785-3991 + ATG--A--------------------------------------------------------------------------------------------------------------------------------TGATTTGGATGTGGACCAA----A-------------------------------------TTGTAACATTATTAAATA----------------------------------------------------------------------------------------------------------------------------------------------ACA-------TTTA--A----------AAATAAAATTT---------------------------------AAAGT--AAATGCATAATGCATAAAGGTTTC---------------------A-GCAGAAGGAGG-CGTGGCAGACCCCACAAAGT----ATATATATTCTTGATCAGGGCGACGAGCTGAGTCGATTTGGCCCTGTCCGTCTGTCTGTCCGTCC------------GTCCGTCCGTCCGTCCGTAT
droGri2 scaffold_14906:6650077-6650335 - ATA--ATATG---------------GTGAAGGGTTAATTAGTTAAGACGTATTT------------GAA---------------GCTG---------------------------------------------------------------------CGAATGGA-----------------------TA-----------------------A---------ACATA----------------TTTATAG----------------------------------------------------TTAGT-TTAATATA-----------------ATTTAAAAGTTTTCAAT-AAACTAAACATTAAAAATTGA---------------------------------------------------------------TAACAAGTATATAATGAGTTTATGCAAATTTACATATGTAACAGGCAGAAG-AAG-GATCTCCGACCCCATAAGGT----AT--ATATTATTGATCAGGGTCAAAAGCCGCGTCGATATAGCCACGTCCCTCTGTCCGTCCGTGT------------G----------------TCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
GGATAATGCG---------------GCGAA--GTAAACTGG----GGCCCATTG------------AAA---------------GCGACA------ATGG------------------------------------------------AACGG----TGAGTGGAA----------------TATTCG--TTTAATTGAAATAGCTTTAAGTG-------------------------------------------------------------------------------------------------TTATTTA-----------------AAAATTAAGCTAATTA---------------------------------------------------------------------CCTAAT-TATAC--AC-----------------------GTTA----CTACACTACAACAGACAGAAGGACG-CGTTTCCGACCATATAAAGT----ATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGGCCATGTCCGTCCGTCTGTCCGTCT------------GTCTGTCC--------GTCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGTCGATC...........................................................28204.8597000000000097
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTGATCAGGATCAATAGCC....................................................................28200.15300300000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCTGGCCATGTCCG...............................................19200.15303000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCCATGTCCGTCCGTCT........................................21200.05101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTCCGTCTGTCCGTCT------------GTCT................23200.05100010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAATAGCCGAGTCGATCTGGCCAT....................................................27200.05110000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTGGCCATGTCCGTCC............................................25200.05100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGATCAATAGCCGAGTCG..............................................................22200.05100000010000
droEre2
GCC-------------------CATTC---------------------T----A------------AGG-G--------------CCACA------ATCA---------------------CAA-------TGTTAA----------------------------A----------------TTTTCT--TTTCATTTTA--------------------------------------------------------------------------------------------------------------------------------------ATATTTA---------------TACTCGTTACTCGTAGAGTAAAAAGTATGTAACAG-GGCAGGATTCAC-------------TTAATAAA-TAT------------------------ATATGTATA----TGAAAATGTAACAGGGAGAAGGATA-CGTTTCCGACCATATAAAGT----ATGTATATTCTTGATCGGGATCAATAGCTGAGTCGATTTGGCCATGTCCGTC---------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droSec2
GGATAA---------------------------------------G-------------------------TCCGAATCATCAAACTTCT------AA-----T------GCAA-TTAACAAG-----GAATGGTGTT---GTTCTGAAAAAA----G-------------------------------------TGTGGACGTGATTTCAT----------------------------------GAAAAC--------------------------------------------------TTTAAGTCAGATCTCAT---------------TT---------------TGTTATACCCATTAGTCGTAGAGT---------------------------------------------------------------AAAAGGGTATACTAGATTCGTTGA----AAAGTATGTAACAGGCAGAAGAAAG-CGTTACCCACCATATTACGT----ATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGGCCATGTC-ATCTGTCCGTCC--------------------------------GGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA----AAAGTATGTAACAGG....................................................................................................................................23201.402828000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA----AAAGTATGTAACAGGCA..................................................................................................................................25200.751515000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT----ATATATATTCTTGATCAGGATC...........................................................................24200.701414000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT----ATATATATTCTTGATCAGGATCA..........................................................................25200.551110001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT----ATATATATTCTTGATCAGGAT............................................................................23200.3577000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT----ATATATATTCTTGATCAGGATCAA.........................................................................26200.3066000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAATAGCCGAGT................................................................26200.2044000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGA----AAAGTATGTAACAGGC...................................................................................................................................23200.1533000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGCCGAGT................................................................25200.1533000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT----ATATATATTCTTGATCAGGATCAAT........................................................................27200.1022000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTGATCAGGATCAATAGC.....................................................................27200.1022000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGA----AAAGTATGTAACAGGCA..................................................................................................................................24200.1022000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGATTCGTTGA----AAAGTAT............................................................................................................................................21200.1020200
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGAAAG-CG.......................................................................................................................20180.0610001
...............................................................................................................................................................................................................................................................................................................................................................................CGTAGAGT---------------------------------------------------------------AAAAGGGTATACTAGATTCG...........................................................................................................................................................28200.0510100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGATCAATAGCCGAGT................................................................28200.0511000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGA----AAAGTATGTAACAGG....................................................................................................................................21200.0511000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGTCGA.............................................................26200.0511000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCAGGATC...........................................................................22200.0510010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGATTCGTTGA----AAAG...............................................................................................................................................21200.0510001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGCCGAGTC...............................................................26200.0511000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGA----AAAGTATGTAACAGGCAGA................................................................................................................................25200.0511000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGTATACTAGATTCGT..........................................................................................................................................................20200.0510100
......................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------------------AAAAGGGTATACTAGATTCGTTGA----A..................................................................................................................................................26200.0511000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAATAGCC....................................................................22200.0511000
....................................................................................................................................................................................................................................................................................................................................................................................AGT---------------------------------------------------------------AAAAGGGTATACTAGATTCGTT.........................................................................................................................................................25200.0511000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGATCAATAGCCGAGTCG..............................................................21200.0510100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----ATATATATTCTTGATCAGGATCAATA.......................................................................27200.0511000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGGATCAATAGCCGAG.................................................................29200.0510100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTCGTTGA----...................................................................................................................................................24200.0511000
..................................................................................................................................................................................................................................................................................................................................................................................AGAGT---------------------------------------------------------------AAAAGGGTATACTAGATTCGT..........................................................................................................................................................26200.0510100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGATCAATAGCCGAGTCGAT............................................................24200.0511000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATCAATAGCCGAGTCGAT............................................................22200.0510001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTATACTAGATTCGTTGA----AAAGTA.............................................................................................................................................27200.0511000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATCTG.........................................................20200.0511000
..................................................................................................................................................................................................................................................................................................................................................................................AGAGT---------------------------------------------------------------AAAAGGGTATACTAGA...............................................................................................................................................................21200.0511000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAGATTCGTTGA----AAAGT..............................................................................................................................................20200.0510001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTAGATTCGTTGA----AAAG...............................................................................................................................................20200.0510100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGATCAATAGCCGAGTCGA.............................................................23200.0510100
droSim2
TGG-------------------AATT-----------------------CATTT------------ATA---------------ATAATA------GTG-----------------------------GAATAGTTCTTTAAATTTGAACCAA----G-------------------------------------TTTGAACCTGCTTAAGTG-------------------------------TTTATAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGAACAGATTTACTAGATTCGTTGA----AAAGTGTGTAACATGCAGAAGGAAG-CGTTT-CGACCATATATAGTACATATATATATTCTTGATCAGTATCAACAGGCGAGTCGCTTTGGAGATGTCCTTCTGTCC----------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTAACATGCAGAAGGAAG-CGTT.....................................................................................................................2516.00600000000004002000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTAACATGCAGAAGGAAG-CGTTT-...................................................................................................................2611.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTATCAACAGGCGAGTCGCTTT..........................................................2511.00100000000001000000
................................................................................................................................................TTGAACCAA----G-------------------------------------TTTGAACCTGCTTAAG..................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTAACATGCAGAAGGAAG-CGT......................................................................................................................2411.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAACATGCAGAAGGAAG-CGTT.....................................................................................................................2611.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----AAAGTGTGTAACATGCAGAAGGAA...........................................................................................................................2511.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACATGCAGAAGGAAG-CGTT.....................................................................................................................2250.80400000000004000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGTATCAAC........................................................................2020.50110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACATGCAGAAGGAAG-CGTT.....................................................................................................................2150.40200000000002000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGCAGAAGGAAG-CGTT.....................................................................................................................1950.40200000000002000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACATGCAGAAGGAAG-CGT......................................................................................................................2050.40200000000002000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGATTTACTAGAG..............................................................................................................................................................1630.33100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACATGCAGAAGGAAG-CGTT.....................................................................................................................2350.20100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACATGCAGAAGGAAG-CGT......................................................................................................................2150.20100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCAGAAGGAAG-CGT......................................................................................................................1750.20100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACATGCAGAAGGAAG-CGTTT-...................................................................................................................2450.20100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATGCAGAAGGAAG-CGTTT-...................................................................................................................2150.20100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATGCAGAAGGAAG-CGTT.....................................................................................................................2050.20100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGAAGGAAG-CGT......................................................................................................................1660.17100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGAAGGAAG-CGTC.....................................................................................................................1780.13100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTGATCAGTATCA..........................................................................22130.08100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCAGT..............................................................................19200.05100000000001000000
dm3
TTG--ATGGA---------------GG--------------------------G------------AATAGCA----CTAAGGAT------------------------------------------CGA----------------------------------------------------------------------CCACTATTTAATAAA--------T-----------------------ATAGA--------------------------------------------------GGTAAG--------AATG--------------ATTTTAA---------------TACACCTTACTCGACGTGT---------------------------------------------------------------AAAAGGGTATTCTAGATT----------------AGTAACAGGCAGAAGGACCAGAATGACAACCATAC-AAGT----ATATATATGCTTGATCAGGATCAATATCCGAGTTGATCTGACAATGTCCGTCTGTCC----------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATCTGACAATGTCCGTC.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAC-AAGT----ATATATATGCTTGATCAGG..............................................................................2811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CA----CTAAGGAT------------------------------------------CGA----------------------------------------------------------------------CCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCCGAGTTGATCTG.........................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATCAATATCCGAGTTGATT...........................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATGCTTGATCAGGATC...........................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATATCCGAGT................................................................2340.2510000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TAGA--------------------------------------------------GGTAAG--------AATG--------------ATTCGT.................................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATATCCGA..................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGATCAATATCCGAGT................................................................2060.1710000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATATCCG...................................................................2070.1410000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGGATCAATATCCG...................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATCAATATCCGAGT................................................................1890.1110000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
GCG-------------------CAATA--------------------------A------------AATGGCA----TTAAAAATCT----------------------------------------------------------------------TAAATGCAA---------------------------------------------------------TATTG----------------AGCATAAG--------------------------------------------------GTTTGTTTTTAAATA-----------------GTGTCAAACTTATTTAT-ATTTTACCCTTTACTCGTAGAAT----------------------------------------------------------------AAAAGGTATGCAAAATTCGTTGA----TAAGTATGTAACAGATAGAAGGAAG-CGTTTCCAACCCTATAAAGT----ATATATATTCTTAATCAGGATCAATAGCGAAGTCGATTGAGCCATGTCCGTCTGTCCGTCCGTTCGTCCGTTCTTCCGTCCGTCC--------GTCCSizeHit CountTotal NormTotal
No Reads
droBia1
GAA-------------------AAGTA--------------------------A-----------------------------------A------ACGAAACGAAAAGT-----------------GAA-------------------ACGA----TTCA-----------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------TTACGTCAATTAT-TTTATT-------G-----------------AATTATTGTA-----------CAATGGCGAAAATCAGCTGTTTTATAC--CCTTG----------------------CA----AAAGTTTGCAAGGCTGTAAAGGAGA-CGTTTTCGAGCCCATAAAGT----ATGTATATTCTTGATCTGCGTCACTAGGCGAGTCGATCTAGCGATGTCCGTCTGTCCGTCCGTCT------------GTCTGCCC--------GT--SizeHit CountTotal NormTotal
No Reads
droTak1
AAC-------------------GATGCCAA--GTATACTCG----GCATTGTAG------------AATCGTA---------------CG-----------------------A-TTAGCA----------------------------------------------------------------TCG--TTACATCGTCAAGGCATTGAATA-------------------------------------------------------------------------------------------------------C-----------------ATTTTTAAAAT------AAT------------------------------------------------------------------------TATAC--CCTTGTAGAGGGTATTATAATTTCAGTCA----GATGTTTGCAACGCAGTGAAGGAGA-CGTTTCCGACCACATAAAGT----ATATATATTCTTGATCAGCACCAATAGCCGAGTCTATCTAGCCATGTCCGTCTGTCCGTCTGTCC------------GTCTGTCC--------GTTTSizeHit CountTotal NormTotal
No Reads
droEle1
GGATAATGCG---------------AAGGA--GTGAACTGG----GTCCATTTG------------ATA---------------GCGAAG------ATGG------------------------------------------------AACGG----TGAGTGCAACTATCTTTTGACTAAA-------------CTATTTC----------------------------------------------------------------------------------------------------------------------TTTTTTAGAAGTCTAT---------------ATT------------------------------------------------------------------------TATAC--CCTTGCAGAGGGTATTATAATTTCAGTCA----GAAGTTTGCAACGCAGTGAAGGAGA-CATCTCCGACCCTATAAAGT----ATATATATTCTTGATCAGCATCACTAGGCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCC------------G----TCC--------GTTTSizeHit CountTotal NormTotal
No Reads
droRho1
TGG-------------------GG-----------------------C--ACTA------------AAAAAC---------------ACA------ATGGAACTGAAAGT-----------------AA-----------------------T----AGAATGCCA---------------------------------------------------------TACTTTTAAAATGCTTTAAAGGCGGAATCT---------------------------------------------------TA----AGAACTA---------------CACT---------------TAT------------------------------------------------------------------------TATAC--CCGTTAAAAGGGTATATTGTATTCGTGCA----AAAGTATGTAACAGCTAGAAGGAAG-CATTTCCGACCCTATAAAGT----ATATATATTCTTGATCAGGGTCATTAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGTCTGTCC------------GTCTGTCTGTCT----GTCCSizeHit CountTotal NormTotal
No Reads
droFic1
TGGTAATGCA---------------T---------------------------A------------AAG-G--------------CAAGA----------------------------------------------A----------------TGGT-------------------------------TA-----------------------ACGACATTGAAATTTTGAAAATTTTTGAGTAGCTAAATATATAACATAGCCTTCCGGTTAATTAATTTTGCAATTCAAT----------------TCAAATATCATTTTGTTTTGCTACTATT---------------TAT------------------------------------------------------------------------TATACTCTTTATAATACCCTCTTATATTTTCAGTCA----GAAGTTTTCAACGCAGTGAAGGAGA-CACCTCAGACCACATAAAGT----TTATATATTCTTGATCAGCATCAGGATCAGAATCGAAATACGTCTGAACGTCTGTCCGTCTTTCA------------G----------------TC-SizeHit CountTotal NormTotal
No Reads
droKik1
AGTTGG---------------------------------------AGCCAGTTG------------AGCGGCA---------------AA-------------------------------AGG-------TGAGAA----------------TGGG-------------------------------TA-----------------------TT----TGGGA------------------------------------------------------------------ATTAAGAAAAGGTTTAAG--------AGT---------------TT---------------TTT------------------------------------------------------------------------TATAC--CCTTGC--AGGGTATTATAATTTCAGTCA----GAAGTTTGCAACGCAGTGAAGGAGA-CGTTTCCGACCCTATAAAGT----ATATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCT------------GTCTGTCC--------GTCTSizeHit CountTotal NormTotal
No Reads
droAna3
GGATTCTGCTTTTTAGAAAACTAA---------------------TACCTAATAAGACTATACCTTATA---------------GCTGCA------AT------------ATAAC------------CAG---ACCA----------------TTTG-------------------------------TA-----------------------TT----TTTTA------------------------------------------------------------------ATTTAAAAA----------------ATATTTTATTTGAAATTGGAT---------------TTT------------------------------------------------------------------------TTTAC--CCTTGCAGAGGGTATTATAATTTTGGTCA----AAAGTGTGCGACGCAGTGAAGGAGA-CATCTACGCCCCTACAAAGT----ATATATATTCTTGATCAGGATCACATCCTGAGTCGATATGAGCATATCCGTCTGTCCGTCTGT--------------------------------TTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTGCGACGCAGTGAAGGAGA-.........................................................................................................................2460.332200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGACGCAGTGAAGGAGA-.........................................................................................................................2160.332000110
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGACGCAGTGAAGG.............................................................................................................................1870.292000002
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTTTGGTCA----AAAGTGTGCGACGCA....................................................................................................................................2740.251000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGTGAAGGAGA-CATCTA...................................................................................................................21200.204100003
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCGACGCAGTGAAGGAG...........................................................................................................................2160.171000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTGCGACGCAGTGAAGGAG...........................................................................................................................2360.171100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGT----ATATATATTCTTGATCAGG..............................................................................24200.153300000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATCCTGAGTCGATATGAGCATA...................................................2570.141100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGCAGTGAAGGAGA-CATCT....................................................................................................................22100.101010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTGCGACGCAGTGAAG..............................................................................................................................20100.101100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTATAATTTTGGTCA----AAAGTGT............................................................................................................................................26200.102200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCACATCCTGAGTCGATATGAGC......................................................26130.081000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCAGTGAAGGAGA-CATCT....................................................................................................................21140.071000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGTGAAGGAGA-CATCTACG.................................................................................................................23160.061000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATATGAGCATATCCGTCTGT..........................................24200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCGTCTGTCCGTCTGT--------------------------------..20200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGCATATCCGTCTGTCCG.......................................21200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGAGTCGATATGAGCATATCC................................................24200.051000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCACATCCTGAGTCGAT............................................................21200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGGATCACATC......................................................................21200.051000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCATATCCGTCTGTCC........................................18200.051010000
droBip1
GCA-------------------AAATA--------------------------A-----------------TACGACTAACCAAATTGCC------AT------------ATAACTGAA--CGATCGGAAATGGTATTTGGAATTTCATAAAA----A-------------------------------------TAGCAA----CTTTCGTA-------------------------------TTTTTGAAAATA------------------------------GAAGCT----------------TGGAATATCATTATTTTTAGAT----AT---------------TTT------------------------------------------------------------------------TATAC--CCTTGCAGAGGGTATTATAATTTTGGTCA----AAAGTGTGCAACGCAGTGAAGGAGA-CATCTCCGACCCTATAAAGT----ATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCC------------GTCTGTCT--------GTCCSizeHit CountTotal NormTotal
No Reads
dp5
ACT-------------------AA---------------------GACTTATTG------------AAATGCA---------------CA-------------------------------AGG-------TGGTAATTTGTATCTGAAACAA----TTAATGCGA---------------------------------------------------------TATTA----------------TTTATAGC--------------------------------------------------TTTGGTTTTGATTTA-----------------GTTTTTATGTTATTTAT-GTTACA-------CTCA--A------------------------------------------A----------------------------------------------A----TCAGTGTGTAAAGTCCAGAAGGAAG-TGTTTCCGACCCCATAAAGT----ACATATATTCTTGATCAGCATAAATAGCAGAGTCAATTGAGCCATTTCTATCTGTCCGTCC------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATAAATAGC.....................................................................2481.1390630000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATAAATA.......................................................................2290.2220200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCATAAATAGC.....................................................................2570.1410010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATAAATAG......................................................................2390.1110100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGCATAAATAG......................................................................2190.1110100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATAAAGT----ACATATATTCTT.....................................................................................21200.0510100000000
droPer2
ACT-------------------AA---------------------GACTTATTG------------AAATGCA---------------CA-------------------------------AGG-------TGGTAATTTGTATCTGAAACAA----TTAATGCGA---------------------------------------------------------TATTA----------------TTTATAGC--------------------------------------------------TTTGGTTTTGATTTA-----------------GTTTTTATGTTATTTAT-GTTACA-------CTCA--A------------------------------------------A----------------------------------------------A----TCAGTGTGTAAAGTCCAGAAGGAAG-TGTTTCCGACCCCATAAAGT----ACATATATTCTTGATCAGCATAAATAGCCGAGTCAATTGAGCCATTTCTATCTGTCCGTCC------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATAAATAGCCGAGT................................................................25120.425050000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATAAATAGCCGAG.................................................................24120.253021000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGCATAAATAGCCGAG.................................................................23120.172020000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATAAATAGCCGAGT................................................................23130.152020000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGAAGGAAG-TGTTTCCGA................................................................................................................2170.141000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGAAGGAAG-TGTTTCCG.................................................................................................................2080.131000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATAAATAGCCGAGTC...............................................................26120.081010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATAAATAGCCGA..................................................................23120.081010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATAAATAGCC....................................................................21130.081010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATAAATAGCCGAGTC...............................................................24130.081010000
droWil2
ATA--ATCCA---------------ACCAA--ATGAACTGT----AGTCGGCTG------------AAA---------------CCGCTT------G---------------------------------------------------TCCAA----TGAATGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTA---------------TACGATACACCCATAGGGT---------------------------------------------------------------GAAATGGTATATTAAAGTCGCCAA----AATGTATGTAACACGCAGAAGGAAG-CTTTTCCGACCCCATAAAGT----ATATATATTCTTGATCAGCAGCAACAGCCGAGTCGATCTAGCCATGTCCGTCCGTCCGTCC------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGCAGCAAC........................................................................1940.25100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCCGAGTCGATCTAGCCATG...................................................25200.15303000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCTAGCCATGTCCGTCC............................................27200.10202000
.....................................................................................................................................................................................................................................................................................................................................................................................GT---------------------------------------------------------------GAAATGGTATATTAAAGTC............................................................................................................................................................21200.10200002
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGAGTCGATCTAGCCATGTC.................................................23200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGAGTCGATCTAGCCATGTCCGTC.............................................28200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCCGAGTCGATCTAGCCA.....................................................23200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGCCATGTCCGTCCGTCCG.......................................22200.05110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCCGAGTCGATCTAGCCATGTCCG...............................................28200.05100010
droVir3
TAG------------------------------------------GATCTATTG------------AAA---------------GCTATAATCAAAAA-----------------------------CAAACGGTTTTTAATAATAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG--T----------AAATAACAGTA---------------------------------ACAGT--AACAGTAACAGTAATAA--TAATAATACA----AATGTATGTAACAGGCAGAAGGAAG-CATCTCCAACCCCATAAAGT----ATATATATTCTTGATCAGCATCAATAGCCAAGTCGATCTAGCCATGTCCGTCTGTATGTCTATCT------------GTCCGTCC--------GTATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTATGTCTATCT------------GTCC................1811.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCATCAATAGC.....................................................................25200.55110000000000000000000000000000011000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCATCAATAGCCAAGTCGATC...........................................................27200.306003010000000000000000000000000000000001000000010000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCAAGTCGATCTAGCCATG...................................................26200.306003000000000000000000002000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGC.....................................................................24200.255000000000000000000000000000500000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAAGTCGATCTAGCCATGTCCGT..............................................26200.204000000000000000000000000000000000000000000000000000000000000004
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTAGCCATGTCCGTCT............................................21200.204000004000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................G--T----------AAATAACAGTA---------------------------------ACAGC--....................................................................................................................................................................................1860.171010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCAAGTCGATC...........................................................28200.153000010000000000000000000000200000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTAGCCATGTCCGTCTG...........................................22200.153000000000000000000003000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAA.........................................................................20200.102000000000000000000000000000000020000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAG-CATC.....................................................................................................................19200.102000000002000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCAAGTCGATCTAGCCAT....................................................25200.102000000000000000000000000000200000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACA----AATGTATGTAACAGGCAGAAGGA............................................................................................................................27180.061000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCATGTCCGTCTGTA.........................................18200.051000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGGAAG-.........................................................................................................................23200.051000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCAAGTCGATCTAGCC......................................................29200.051000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCAAGTCGATCTAGCCATGTCCG...............................................26200.051000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCATCAATAGCCAA..................................................................28200.051000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAGGAAG-CATCTCCAACCCCAT..........................................................................................................26200.051000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCGATCTAGCCATGTCCG...............................................21200.051000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGT----ATATATATTCTTGATCAGCA.............................................................................24200.051000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAGCCATGTCCGTCTGTA.........................................21200.051000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCATCAATAGCCA...................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAGT----ATATATATTCTTGATCAGCA.............................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGCCAAGTC...............................................................27200.051000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTCGATCTAGCCATGTCCGTC.............................................24200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCAAGTCGATCT..........................................................25200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAGGAAG-CATCTCCAACCCCA...........................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAG-CATCTCCAACC..............................................................................................................28200.051000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGCATCAATAGCCAAGTCGAT............................................................25200.051000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCAGAAGGAAG-CATCTCC..................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGCCAAG.................................................................25200.051000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGTCGATCTAGCCATGTCCGTCT............................................26200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAACAGGCAGAAGGA............................................................................................................................18200.051000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAATAGCCAAGTCGATCTAGCCA.....................................................27200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAATAGCCAAGTCGATCTAG........................................................26200.051000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTCGATCTAGCCATGTCCGTC.............................................26200.051000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCAAGTCGATCTAGC.......................................................28200.051000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGG.............................................................................................................................19200.051000010000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTCGATCTAGCCATGTCCGT..............................................25200.051000010000000000000000000000000000000000000000000000000000000000
droMoj3
ATG--A--------------------------------------------------------------------------------------------------------------------------------TGATTTGGATGTGGACCAA----A-------------------------------------TTGTAACATTATTAAATA----------------------------------------------------------------------------------------------------------------------------------------------ACA-------TTTA--A----------AAATAAAATTT---------------------------------AAAGT--AAATGCATAATGCATAAAGGTTTC---------------------A-GCAGAAGGAGG-CGTGGCAGACCCCACAAAGT----ATATATATTCTTGATCAGGGCGACGAGCTGAGTCGATTTGGCCCTGTCCGTCTGTCTGTCCGTCC------------GTCCGTCCGTCCGTCCGTATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGCCCTGTCCGTCTGT..........................................21201.35272700000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATTTGGCCCTGTCCGTC.............................................21200.153000003
...................................................................................................................................................................................................TTGTAACATTATTAAATA----------------------------------------------------------------------------------------------------------------------------------------------ACA-------TTTA--A----------AA.....................................................................................................................................................................................................................................28200.153000030
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTGATCAGGGCGACG........................................................................24200.153300000
...................................................................................................................................................................................................TTGTAACATTATTAAATA----------------------------------------------------------------------------------------------------------------------------------------------ACA-------TTTA--A----------A......................................................................................................................................................................................................................................27200.102200000
....................................................................................................................................................................................................TGTAACATTATTAAATA----------------------------------------------------------------------------------------------------------------------------------------------ACA-------TTTA--A----------AA.....................................................................................................................................................................................................................................27200.102200000
......................................................................................................................................................................................................................................................................................................................................................................................................TTT---------------------------------AAAGT--AAATGCATAATGCATAAAGG................................................................................................................................................................28200.102100010
.TG--A--------------------------------------------------------------------------------------------------------------------------------TGATTTGGATGTGGACCAA----A-------------------------------------T.................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102010010
...........................................................................................................................................TGGATGTGGACCAA----A-------------------------------------TTGTAACATT........................................................................................................................................................................................................................................................................................................................................................................................................................25200.102100010
....................................................................................................................................................................................................TGTAACATTATTAAATA----------------------------------------------------------------------------------------------------------------------------------------------ACA-------TTTA--A----------A......................................................................................................................................................................................................................................26200.102100010
..........................................................................................................................................TTGGATGTGGACCAA----A-------------------------------------TTGTAACATT........................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTTGGCCCTGTCCGTCTGTCT........................................24200.051100000
..............................................................................................................................................................................................................TTAAATA----------------------------------------------------------------------------------------------------------------------------------------------ACA-------TTTA--A----------AAATAAAAT..............................................................................................................................................................................................................................24200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................TTT---------------------------------AAAGT--AAATGCATAATGCATAAAGC................................................................................................................................................................28200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AAGT--AAATGCATAATGCATAAAGG................................................................................................................................................................24200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCCGTCC------------GTCCGTCC............21200.051001000
..........................................................................................................................................TTGGATGTGGACCAA----A-------------------------------------TTGTAACATC........................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
...........................................................................................................................................................................................................TTATTAAATA----------------------------------------------------------------------------------------------------------------------------------------------ACA-------TTTA--A----------AA.....................................................................................................................................................................................................................................20200.051000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGTCCGTCTGTCTG.......................................18200.051000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-GCAGAAGGAGG-CGTGGCAG.................................................................................................................20200.051100000
...................................................................................................................................................................................................TTGTAACATTATTAAATA----------------------------------------------------------------------------------------------------------------------------------------------ACA-------TTTA--..................................................................................................................................................................................................................................................25200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACGAGCTGAGTCGATTTGGCCCT....................................................26200.051100000
ATG--A--------------------------------------------------------------------------------------------------------------------------------TGATTTGGATGTGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
.....A--------------------------------------------------------------------------------------------------------------------------------TGATTTGGATGTGGACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
..............................................................................................................................................ATGTGGACCAA----A-------------------------------------TTGTAACATTATT.....................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGCGACGAGCTGAGTCG..............................................................20200.051000001
ATG--A--------------------------------------------------------------------------------------------------------------------------------TGATTTGGATGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGGGCGACGAGCTGAGTCGATT...........................................................27200.051100000
....................................................................................................................................................................................................TGTAACATTATTAAATA----------------------------------------------------------------------------------------------------------------------------------------------ACA-------TTTA--A----------.......................................................................................................................................................................................................................................25200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTCGATTTGGCCCTGTCCGG..............................................23200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGGCGACGAGCTGAGTCG..............................................................22200.051000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCCCTGTCCGTCTGTCTGTCCGT..................................26200.051100000
...............................................................................................................................................TGTGGACCAA----A-------------------------------------TTGTAACATTATT.....................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.......................................................................................................................................GATTTGGATGTGGACCAA----A-------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
.TG--A--------------------------------------------------------------------------------------------------------------------------------TGATTTGGATGTGGACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
droGri2
ATA--ATATG---------------GTGAAGGGTTAATTAGTTAAGACGTATTT------------GAA---------------GCTG---------------------------------------------------------------------CGAATGGA-----------------------TA-----------------------A---------ACATA----------------TTTATAG----------------------------------------------------TTAGT-TTAATATA-----------------ATTTAAAAGTTTTCAAT-AAACTAAACATTAAAAATTGA---------------------------------------------------------------TAACAAGTATATAATGAGTTTATGCAAATTTACATATGTAACAGGCAGAAG-AAG-GATCTCCGACCCCATAAGGT----AT--ATATTATTGATCAGGGTCAAAAGCCGCGTCGATATAGCCACGTCCCTCTGTCCGTCCGTGT------------G----------------TCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:19 PM