ID:

dya_803

 Coordinate:

3L:15307684-15307834 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.0 -2.3 -2.2

Flybase annnotation

CDS [Dyak\GE22055-cds]; exon [dyak_GLEANR_5764:2]; intron [Dyak\GE22055-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
TART_DVLINEJockey+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGCAGCACCACAGCAACCACGGCAACCACCACCAGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAACACCAGCAGCAGCAAGAACACTACCAGCAGCAACAGCAACAACAGAATATCGCCAACAATGCCAATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCACACTCGCAGCAGAGCGGAGGAGGCGGT
**************************************************************************.......................(((......((..............))......)))...........................******************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M056
embryo
 M043
female body
 V120
male body		 V058
head
 V052
head
..............................................................................................................................................................................................................................CACACTCGCAGCAGAGCGGAGG....... 22 0 1 1.00 1 0 1 0 0 0
..........................................................................CAGCAGCAGCAAGAACACTACC........................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................TTCAACTCCTCGTCCTACTC........................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................CACACTCGCAGCAGAGCGGAGGAGGC... 26 0 1 1.00 1 0 0 1 0 0
..................................................................AGAAACACCAGCAGCAGCAAGAACACT.............................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0
...............................................................................GCAGCAAGAACACTACCAGCAGCAAC.................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................TCCTCACACTCGCAGCAGAGCGGAG........ 25 0 1 1.00 1 0 1 0 0 0
............................................................................................................................................................................................................................CTCACACTCGCAGCAGAGCGGAGGA...... 25 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................................................................................................CACTCGCAGCAGAGCGGAGGAGGC... 24 0 1 1.00 1 1 0 0 0 0
..........CACCAACCACGGCAACCACCACC.......................................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................ATTCCCGCGAGGCTACCAT.......................................... 19 3 7 0.14 1 0 0 0 1 0
............................................................AGCAGCAGCAACACCAGCAGC.......................................................................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0
...........................................GCAGCAACAACAACAACAGCAGCAGCA..................................................................................................................................................................................... 27 0 12 0.08 1 0 1 0 0 0
........................................................CAACAGCAGCAGCAACACC................................................................................................................................................................................ 19 0 19 0.05 1 0 1 0 0 0
...............................................CAACAACAACAACAGGAGCAGCAACA.................................................................................................................................................................................. 26 1 20 0.05 1 0 1 0 0 0
................................................AACAACAACAACAGCAGCAGCAAC................................................................................................................................................................................... 24 0 20 0.05 1 0 0 1 0 0
.............................................AGCAACAACAACAACAGCAGC......................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
.....................................................CAACAACAGCAGCAGCAAC................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
..................................................CAACAACAACAGCAGCAGCA..................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 1
..........................CACCACCAGCAGCAGCAGCA............................................................................................................................................................................................................. 20 0 20 0.05 1 0 1 0 0 0
..................................GCAGCAGCAGCAGCAACAACA.................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
..................................GCAGCAGCAGCAGCAACAACAACAA................................................................................................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0
.........................................................................................................................CGCCAACAATGCTACCCAAT.............................................................................................................. 20 3 20 0.05 1 0 0 0 1 0
.....................................................CAACAACAGCAGCAGCAACA.................................................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

TCGTCGTGGTGTCGTTGGTGCCGTTGGTGGTGGTCGTCGTCGTCGTCGTTGTTGTTGTTGTCGTCGTCGTTGTGGTCGTCGTCGTTCTTGTGATGGTCGTCGTTGTCGTTGTTGTCTTATAGCGGTTGTTACGGTTAGTTAAGTTGAGGAGCAGGATGAGCATATATATGTTAAAGCTAAGTGTCATATATAAGGGCTGTCCGATGGTCCTGTGGTGGAGGAGTGTGAGCGTCGTCTCGCCTCCTCCGCCA
*******************************************************************************************.......................(((......((..............))......)))...........................************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V058
head
 M043
female body
..................................................................................................................................................................................................................TGTGGTAGAGGAGTGTGATGGT................... 22 3 1 1.00 1 1 0
.................................................................................................................................................................................................................TTTTGGTGGAGGAGTGTGAGGGT................... 23 3 1 1.00 1 1 0
..................................................................................................................................................................................................................TGTGGTGGCGGGGTGTGAGGGT................... 22 3 3 0.33 1 1 0
...................................................................................................................................................................................................................GTGGTGGAGGGGTGTGACGGT................... 21 3 6 0.17 1 1 0
.................................................................................TCGTGCTTGTGATGTTCGT....................................................................................................................................................... 19 2 6 0.17 1 0 1
.................................TCGTCGTCGTCGTCGTTGTTGTTGTTG............................................................................................................................................................................................... 27 0 18 0.06 1 0 1
...................................................................................................................................................GGAGCAGGATGTACATTTA..................................................................................... 19 3 20 0.05 1 1 0
....................................................................................................................................................................................................................TGGTGGAGGGGTGTGACGGT................... 20 3 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3L:15307634-15307884 + dya_803 AGCAGCACCACAGCA---A---------CCACGGCAACCACCACCAGCAGCAG------------------CAGC---------AGCAACAA---CAAC---------------------AACAGCAGCAGC------A---------A------------------------CACCA------GCAGCAGCAAGAACACTACCAGCAG--------------------------------------CAACAGCAACAACAGAATATCGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCACACTCGCAGCAGAGCG------GA---GGAGGCGGT
droEre2 scaffold_4784:15167923-15168173 + der_823 AGCAGCACCACAGCA---A---------CCACGGCAACCACCACCAGCAGCAG------------------CAGC------------AACAG---CAAC---------------------AACAGCAGCAGC------A---------A------------------------CACCAGCAGCAGCAGCAGCAAGAACACTACCAGCAG-----------------------------------------CAACAGCAACAGAATATCGCC---AACAATGCCAAC------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGCG------GA---GGAGGCGGT
droSec2 scaffold_19:729902-730149 - dse_940 AACAGCACCACAGCA---ACC---------ACGGCAAC---CACCAGCAGCAG------------------CAGC---------AACAACAA---CAGC---------------------AGCAGCAGCAGC---------------AA------------------------CATCA---GCAGCAGCAGCAAGAACACTACCAGCAG-----------------------------------------CAACAGCAACAGAATATCGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTTGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCACACTCGCAGCAGAGCG------GA---GGAGGCGGT
droSim2 3l:18384353-18384606 - dsi_8293 AGCAGCACCACAGCA---A---------CCACGGCAACCACCACCAGCAGCAG------------------CAGC------------AACAA---CAGC---------------------AGCAGCAGCAGC------A---ACATCAG------------------------CAGCA---GCAGCAGCAGCAAGAACACTACCAGCAG-----------------------------------------CAACAGCAACAGAATATCGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCGCACTCGCAGCAGAGCG------GA---GGAGGCGGT
dm3 chr3L:18756913-18757169 - AGCAGCACCACAGCA---ACCACAGCAACCACGGCAACCACCACCAGCAGCAG------------------CAGC------------AACAA---CAGC---------------------AACAGCAGCAGC------A---------A------------------------CATCA---GCAGCAGCAGCAAGAACACTACCAGCAG-----------------------------------------CAACAGCAACAGAATATCGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCACACTCGCAACAGAGCG------GA---GGAGGCGGT
droEug1 scf7180000409471:731592-731833 + AGCAACACCACAGTAACAGCC------------------ACCACCAGCAGCAG------------------CAGC---------AGCAACAG---CAAC---------------------AACAGCAGCAGC------A---------A------------------------CACCA---ACAGCAGCAGCAAGAACACTACCAGCAA-----------------------------------------C---AACAACAGAATATTGCC---AACAATGCCAAC------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCACACTCGCAGCAAAGCG------GC---GGTGGCGGT
droBia1 scf7180000302529:742118-742332 + AGCAGCACCACACCA---CCC------------------ACCACCAGCAGCAG------------------CAGC------------A------------------------------------------------------------C------------------------CAGCA---GCAGCAGCAGCAGGAGCACTACCAGCAG-----------------------------------------C---AGCAACAGAATATCGCC---AACAACGCCAAC------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGCG------GA---GGGGGCGGT
droTak1 scf7180000415184:294123-294361 + AGCAACACCACAGCA---GCC------------------ACCACCAGCAACAG------------------CAGC------------AGCAG---CAAC---------------------AA---CAGCAGC------A---ACATCAG------------------------CAGCA---GCAGCAGCAACAAGAACACTACCAGCAG-----------------------------------------C---AACAACAGAATATTGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCACTCGCAGCAAAGCG------GA---GGAGGCGGT
droEle1 scf7180000490993:1675973-1676226 - AGCAACACCACACCA---ATC------------------ACCACCAGCAACCG------------------CAACAGCAGCAACAGCAACAG---CAGC---------------------AACACCAGCAGC------A---ACAACAA------------------------CAGCA---GCAGCAGCAACAAGATCACTACCAGCAG-----------------------------------------C---AACAACAGAATATTGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCATTCACAGCAAAGCG------GC---GGAGGCGGT
droRho1 scf7180000779212:84563-84831 + AGCAACACCACAACACCACTC------------------ACCACCAGCAACAG------------------CAGCAGC------AGCAACAA---CAACAGCAGCAGCAGC---------AACACCAGCAACAACAACA---ACAGCAG------------------------CAGCA---ACAGCAGCAACAAGAACACTACCAACAG-----------------------------------------C---AACAACAGAATATTGCC---AACAATGCCAAT------------CCATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTACCAGGACACCACCTCCTCGCATTCGCAGCAAAGTG------GC---GGAGGCGGT
droFic1 scf7180000453824:120209-120444 - AGCAGCACCACAGCA---ACC------------------ACCACCAGCAGCAG------------------CAAC------------AGCAG---CAG---------------------------CAGCAGC------A---ACACCAG------------------------CAACA---GCAGCAGCAGCAAGAGCACTACCAGCAG-----------------------------------------C---AACAACAGAATATTGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCACTCGCAGCAAAGTG------GA---GGGGGCGGT
droKik1 scf7180000302248:212232-212491 + AGCAACACCACAATG---CCC------------------ACCACCAGCAACAA------------------CAGC------------AGCAGCAGCAAC------------------------AACAGCAGC------A---ACACCAGCAGCAGCAGCAACAACAGGAGCATTACCA---ACAACAA---------------CAGCAG-----------------------------------------C---AACAACAGAATATAGCC---AACAATGCCAAT------------CAATTCAACGCGTCATCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCATTCCCAACAAAGTGCCGGCGGCGGCGGAGGTGGC
droAna3 scaffold_13337:18671419-18671660 + dan_2716 CGCACCACCAC--C------AACAGC----------------------AACAACAACACCAGCAGACGCAGCAGC---------------------AAC------------AACACCAACAACAGCAGCAGC---------------AA------------------------CAGCA---ACAACAGCAACAAGATCACTACCAA-----------------------------------------------CAACAACAGAATATTGTC---AACAATGCCAAT------------CAATTCAATGCCTCGTCCTACTCGTACATATACAATTTCGACTCACAGTACATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCCCAGCAGAGCG------G------GGGCGGT
droBip1 scf7180000396741:1862909-1863153 + CGCACCACCA--AC------AACAGC-A--------A----CACCAGCAGCAG------------------CAGC------------AACAC---CAGC---AAC---------------AGCAGCAACAAC------A---ACACCAG------------------------CAACA---ACAACAGCAACAAGATCACTACCAACAA-----------------------------------------CAACAACAACAGAATATTGCC---AACAACGCCAAC------------CAATTCAACTCCTCATCCTACTCGTACATATACAATTTCGACTCACAGTACATATTCCCGACAGGCTACCTGGACACCACCTCCTCGCACTCGCAGCAGAGCG------G------GGGCGGT
dp5 XR_group6:4206907-4207157 + dps_3032 AGCAACAGCA--GC------AGCAGC-ACCACAGCACGCACCACCAGCAGCAG------------------CAGC------------AGCAG---CAGC---------------------AGTCCGACCAGC---------------------------------AGGGGCACTACCA---ACAGCAGCAGCA--------------------------------------------------GCAGCAGCAGCAACAACAGAATATTGCC---AACAACGCCAAC------------CAATTCAACTCCTCGTCCTACTCGTATATATACAACTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGTG------GCGGTGGGGGCGGC
droPer2 scaffold_9:2497470-2497717 + AGCAACAGCA--GC------AGCAGC-ACCACAGCACGCACCACCAGCAGCAG------------------CAGC------------AGCAG---CAGT---------------------CCGACCAGCAGG------G---GCA---C------------------------TACCA---ACAGCAGCAGCA--------------------------------------------------GCAGCAGCAGCAACAACAGAATATTGCC---AACAACGCCAAC------------CAATTCAACTCCTCGTCCTACTCGTATATATACAACTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGTG------GCGGTGGGGGCGGC
droWil2 scf2_1100000004762:1598380-1598613 - GGCGGCGGCG--GC------AATAGT-GGAGG----------------------------------------------------------------------------------------------AGGAGC----------------T------------------------CATCA---GCAGCAGCAGCAACAACATTACCAGCAACAGAATCTATCAAATAATGCCAATAATAACAACAACAA-----------------------C---AACAACAACAAT------------CAATTCACATCCCAATCCTATTCGTATATATACAATTTTGATTCACAGTATATATTCCCAACAGGCTATCAAGATACCACATCCTCACACTCGCAACAAAGCG---GCGGTGGTGGAGGAGGT
droVir3 scaffold_13049:18170788-18171038 + dvi_20427 ATCAGCAGCA--GC------AACAAC-AACATCACACGCATCACCAGCAACAG------------------CAAC------------AACAA---CAAC---------------------AACATTACCAAC------A---------A------------------------CAACAACAGCAGCAGC------------AGCAG--------------------------------------------CAACAACAACAAAATATTGCCAGCAACAATACGAAT---GCCGCGAACCAATTCAACGCCTCCTCTTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGGTATCAGGAAACGAACTCATCTCATTCACAGCAAAGCG------GC---AATGGAGCT
droMoj3 scaffold_6680:23748199-23748446 + G---------------------------------CAAT---CATCAGCAGCAG------------------CATC---------CACAGCAG---CAGC---------------------AACAGCAGCACC------TTAATGCGCAT------------------------CATCA---GCAACAGCAACAACAACAGTATCAACAG-----------------------------------------C---AACAACAGAATATTGCCAGCAACAATGCGAATAGTGCAGCGAACCAATTCAATGCCTCCTCTTATTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGAAACCAATTCGTCTCATTCGCAGCAAAGCG------GT---AACGGCACC
droGri2 scaffold_15110:24222303-24222538 + dgr_348 AGCAGCAGCA--GC------AACACT-CACATCACACACATCACCAGCAGCAG------------------CAGC---------AGCA---------AC---------------------AACAGCAGCA------------------------------------------------------------------GCATTACCAACAG-----------------------------------------CAACAACAACAAAATATTGCC---AACAATGCGAATGCAGCGGCGAACCAATTCAATGCTTCCTCCTATTCGTATATATACAATTTCGATTCACAGTACATATTCCCGACAGGCTATCAGGAAACGAACTCATCCCATTCGCAGCAAAGTG------CA---AATGGAGCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
AGCAGCACCACAGCA---A---------CCACGGCAACCACCACCAGCAGCAG------------------CAGC---------AGCAACAA---CAAC---------------------AACAGCAGCAGC------A---------A------------------------CACCA------GCAGCAGCAAGAACACTACCAGCAG--------------------------------------CAACAGCAACAACAGAATATCGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCACACTCGCAGCAGAGCG------GA---GGAGGCGGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................CACACTCGCAGCAGAGCG------GA---GG.......2211.00101000000000
................................................................................................................................................................................CA------GCAGCAGCAAGAACACTACC.........................................................................................................................................................................................................................2211.00100100000000
.............................................................................................................................................................................................................................................................................................................TTCAACTCCTCGTCCTACTC....................................................................................................2011.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................CACACTCGCAGCAGAGCG------GA---GGAGGC...2611.00100000010000
...........................................................................................................................................................................................GCAGCAAGAACACTACCAGCAG--------------------------------------CAAC..........................................................................................................................................................................2611.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................TCCTCACACTCGCAGCAGAGCG------GA---G........2511.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CTCACACTCGCAGCAGAGCG------GA---GGA......2511.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CACTCGCAGCAGAGCG------GA---GGAGGC...2411.00100100000000
...........................................................................................................................AGCAGCAGC------A---------A------------------------CACCA------GCAGC........................................................................................................................................................................................................................................21110.09100100000000
.........................................................................GC---------AGCAACAA---CAAC---------------------AACAGCAGCAGC------A---------.................................................................................................................................................................................................................................................................................27120.08101000000000
..................................................................................................C---------------------AACAGCAGCAGC------A---------A------------------------CACC....................................................................................................................................................................................................................................................19190.05101000000000
.......................................................................................AACAA---CAAC---------------------AACAGCAGCAGC------A---------A------------------------C.......................................................................................................................................................................................................................................................24200.05100000010000
....................................................................................AGCAACAA---CAAC---------------------AACAGCAGC....................................................................................................................................................................................................................................................................................................21200.05101000000000
...............................................................................................CAAC---------------------AACAGCAGCAGC------A---------A------------------------C.......................................................................................................................................................................................................................................................19200.05100100000000
.........................................................................................CAA---CAAC---------------------AACAGCAGCAGC------A---------.................................................................................................................................................................................................................................................................................20200.05100001000000
......................................CACCACCAGCAGCAG------------------CAGC---------A................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
..............................................GCAGCAG------------------CAGC---------AGCAACAA---CA....................................................................................................................................................................................................................................................................................................................................21200.05101000000000
..............................................GCAGCAG------------------CAGC---------AGCAACAA---CAAC---------------------AA...........................................................................................................................................................................................................................................................................................................25200.05101000000000
...............................................................................................CAAC---------------------AACAGCAGCAGC------A---------A------------------------CA......................................................................................................................................................................................................................................................20200.05100000010000
droEre2
AGCAGCACCACAGCA---A---------CCACGGCAACCACCACCAGCAGCAG------------------CAGC------------AACAG---CAAC---------------------AACAGCAGCAGC------A---------A------------------------CACCAGCAGCAGCAGCAGCAAGAACACTACCAGCAG-----------------------------------------CAACAGCAACAGAATATCGCC---AACAATGCCAAC------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGCG------GA---GGAGGCGGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCAGAGCG------GA---GGAGGCGGG2311.0011000000
............................................................................................................................................................................................................................................................................................................................................................................TACCAGGACACCACCTCCT......................................1911.0011000000
.........................................................................GC------------AACAG---CAAC---------------------AACAGCAGC....................................................................................................................................................................................................................................................................................................20200.1021100000
....................................................G------------------CAGC------------AACAG---CAAC---------------------AACAGCAGCA...................................................................................................................................................................................................................................................................................................24110.0910100000
.........................................CACCAGCAGCAG------------------CAGC------------AACAG---......................................................................................................................................................................................................................................................................................................................................21130.0810001000
....................................ACCACCACCAGCAGCAG------------------CAGC------------..............................................................................................................................................................................................................................................................................................................................................21170.0610000010
................................................AGCAG------------------CAGC------------AACAG---CAAC---------------------AA...........................................................................................................................................................................................................................................................................................................20200.0510001000
..........................................................................................AG---CAAC---------------------AACAGCAGCAGC------A---------.................................................................................................................................................................................................................................................................................19200.0511000000
...........................................CCAGCAGCAG------------------CAGC------------AACAG---C.....................................................................................................................................................................................................................................................................................................................................20200.0510000010
...........................................................................................G---CAAC---------------------AACAGCAGCAGC------A---------A------------------------CA......................................................................................................................................................................................................................................................21200.0510000100
.............................................................................................................................................................................CACCAGCAGCAGCAGCAGCA....................................................................................................................................................................................................................................20200.0510000010
..........................................................................................................................................A---------A------------------------CACCAGCAGCAGCAGCA.......................................................................................................................................................................................................................................19200.0511000000
........................................................................AGC------------AACAG---CAAC---------------------AACAGCAG.....................................................................................................................................................................................................................................................................................................20200.0511000000
....................................................................................................................................................A------------------------CACCAGCAGCAGCAGCAGC.....................................................................................................................................................................................................................................20200.0510100000
.......................................................................................AACAG---CAAC---------------------AACAGCAGCAGC------...........................................................................................................................................................................................................................................................................................21200.0510010000
.......................................................................................AACAG---CAAC---------------------AACAGCAGCAGC------A---------.................................................................................................................................................................................................................................................................................22200.0510000010
......................................CACCACCAGCAGCAG------------------CAGC------------..............................................................................................................................................................................................................................................................................................................................................19200.0511000000
droSec2
AACAGCACCACAGCA---ACC---------ACGGCAAC---CACCAGCAGCAG------------------CAGC---------AACAACAA---CAGC---------------------AGCAGCAGCAGC---------------AA------------------------CATCA---GCAGCAGCAGCAAGAACACTACCAGCAG-----------------------------------------CAACAGCAACAGAATATCGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTTGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCACACTCGCAGCAGAGCG------GA---GGAGGCGGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................TCGCAGCAGAGCG------GA---GGAGGC...2111.0010010
..............................................................................................................................................................................................................................................................................................................................................TTTGATTCACAGTATATATT...................................................................2011.0011000
..................ACC---------ACGGCAAC---CACCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................TCGCAGCAGAGCG------GA---GGAGGCGGT2411.0010010
............................................................................................................................................................................................................................................................................................................................................................................................CCTCACACTCGCAGCAGAGCG------..............2111.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGAGCG------GA---GGAGGC...1821.0020011
............................................CAGCAGCAG------------------CAGC---------AACAAC...........................................................................................................................................................................................................................................................................................................................................19200.0510001
........................................................................................ACAA---CAGC---------------------AGCAGCAGCAGC---------------A.................................................................................................................................................................................................................................................................................21200.0510010
droSim2
AGCAGCACCACAGCA---A---------CCACGGCAACCACCACCAGCAGCAG------------------CAGC------------AACAA---CAGC---------------------AGCAGCAGCAGC------A---ACATCAG------------------------CAGCA---GCAGCAGCAGCAAGAACACTACCAGCAG-----------------------------------------CAACAGCAACAGAATATCGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCGCACTCGCAGCAGAGCG------GA---GGAGGCGGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................AACAGAATATCGCC---AACAATG............................................................................................................................................2112.00200000000000002000
...........................................................................................................................................................................................................................................................................................AAT------------CAATTCAACTCCTCGTCCTACTCGTA.................................................................................................2912.00200200000000000000
.........................................................................................................................................................................................CAGCAGCAAGAACACTACCAG.......................................................................................................................................................................................................................2121.00200000000000002000
...........................................................................................................................................................................................................................................................................................................AATTCAACTCCTCGTCCTACTCG...................................................................................................2311.00100100000000000000
.........ACAGCA---A---------CCACGGCAACCACC...........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................GCACTCGCAGCAGAGCG------GA---GGA......2211.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CTCGCAGCAGAGCG------GA---GGAGGC...2211.00100000000000100000
.......................................................................................................................................................................................................................................................................................TGCCAAT------------CAATTCAACTCCTCGTCC.........................................................................................................2511.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................TCCCGACAGGCTACCAGGACA...............................................2111.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GACAGGCTACCAGGACACCA............................................2011.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................CTCGCACTCGCAGCAGAGCG------GA---.........2211.00100001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TCCTCGCACTCGCAGCAGAGCG------GA---.........2411.00100000001000000000
.....................................................................................................................................................................................................................................................................................AATGCCAAT------------CAATTCAACTCCTC.............................................................................................................2311.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCAGAGCG------GA---GGAGGCG..2111.00100000000000001000
..............................................................................................................................................................................................................................................................................................................TCAACTCCTCGTCCTACTCG...................................................................................................2011.00100100000000000000
..............................................................................................................................................................................................................................................................................................................TCAACTCCTCGTCCTACTCGT..................................................................................................2111.00100000000000100000
..................................................................................................................................................................................................................................................................................................................................................................CCCGACAGGCTACCAGGACAC..............................................2111.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................CGCACTCGCAGCAGAGCG------GA---.........2011.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAGCG------GA---GGAGGCGG.1920.50100000000000001000
..........................................................................................................................................................................................AGCAGCAAGAACACTACCAGC......................................................................................................................................................................................................................2120.50101000000000000000
..........................................................................................AA---CAGC---------------------AGCAGCAGCAGC------A---ACATC..................................................................................................................................................................................................................................................................................24150.07100000000001000000
..........................................................................C------------AACAA---CAGC---------------------AGCAGCAGCAGC------...........................................................................................................................................................................................................................................................................................22200.05100000000000100000
..................................................................................................................................GC------A---ACATCAG------------------------CAGCA---GCA.............................................................................................................................................................................................................................................18200.05100000000001000000
dm3
AGCAGCACCACAGCA---ACCACAGCAACCACGGCAACCACCACCAGCAGCAG------------------CAGC------------AACAA---CAGC---------------------AACAGCAGCAGC------A---------A------------------------CATCA---GCAGCAGCAGCAAGAACACTACCAGCAG-----------------------------------------CAACAGCAACAGAATATCGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCACACTCGCAACAGAGCG------GA---GGAGGCGGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.........................................................................GC------------AACAA---CAGC---------------------AACAGCAGCAG..................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
........................................................................................................................AACAGCAGCAGC------A---------A------------------------CATCA---GCA.............................................................................................................................................................................................................................................22100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................C------------AACAA---CAGC---------------------AACAGCAGCAGC------...........................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000
...........................................................................................................................................................................................................CAGCAG-----------------------------------------CAACAGCAACAGAA.............................................................................................................................................................20100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
........................................................................................ACAA---CAGC---------------------AACAGCAGCAGC------A---------A------------------------C.......................................................................................................................................................................................................................................................23130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................G------------------CAGC------------AACAA---CAGC---------------------AACAGCAGCAGC------A---------.................................................................................................................................................................................................................................................................................27130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.....................................CCACCACCAGCAGCAG------------------CAGC------------..............................................................................................................................................................................................................................................................................................................................................20140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AACAGCAGCAGC------A---------A------------------------CATCA---GC..............................................................................................................................................................................................................................................21160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................CAGC------------AACAA---CAGC---------------------AACAGCAGCAGC------...........................................................................................................................................................................................................................................................................................25160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................CAGCAGCAGC------A---------A------------------------CATCA---GCAGCAG.........................................................................................................................................................................................................................................24170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CAGC------------AACAA---CAGC---------------------AACAGCAGCAG..................................................................................................................................................................................................................................................................................................24170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................AGCAGCAGC------A---------A------------------------CATCA---GCAGCAGC........................................................................................................................................................................................................................................24190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................GCAG------------------CAGC------------AACAA---CAGC---------------------AACA.........................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................G------------------CAGC------------AACAA---CAGC---------------------AACAGCA......................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GC---------------------AACAGCAGCAGC------A---------A------------------------CA......................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................CAGC------A---------A------------------------CATCA---GCAGCAGCAG......................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................AGCAGCAGC------A---------A------------------------CATCA---GCAGC...........................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
....................................................G------------------CAGC------------AACAA---CAGC---------------------AACA.........................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................CAG------------------CAGC------------AACAA---CAGC---------------------AACAGCA......................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CAGCAG------------------CAGC------------AACAA---CAGC---------------------AAC..........................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..................................................................................................................................GC------A---------A------------------------CATCA---GCAGCAGCAGCA....................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CAGCAG------------------CAGC------------AACAA---CAGC---------------------AA...........................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................AGCAGC------A---------A------------------------CATCA---GCAGCAGCAGC.....................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................ACCACCAGCAGCAG------------------CAGC------------A.............................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................ACAGCAGCAGC------A---------A------------------------CATCA---GC..............................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................CAGC------------AACAA---CAGC---------------------AACAGCAGC....................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGCAG------------------CAGC------------AACAA---CAGC---------------------A............................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................CAA---CAGC---------------------AACAGCAGCAGC------A---------.................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GCAGCAG------------------CAGC------------AACAA---CAG...................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AACAA---CAGC---------------------AACAGCAGCA...................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................AA---CAGC---------------------AACAGCAGCAGC------A---------A------------------------C.......................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................CAGCAGCAGC------A---------A------------------------CATCA---GCA.............................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................CAG------------------CAGC------------AACAA---CAGC---------------------AACAGCAG.....................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
AGCAACACCACAGTAACAGCC------------------ACCACCAGCAGCAG------------------CAGC---------AGCAACAG---CAAC---------------------AACAGCAGCAGC------A---------A------------------------CACCA---ACAGCAGCAGCAAGAACACTACCAGCAA-----------------------------------------C---AACAACAGAATATTGCC---AACAATGCCAAC------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCACACTCGCAGCAAAGCG------GC---GGTGGCGGTSizeHit CountTotal NormTotal
No Reads
droBia1
AGCAGCACCACACCA---CCC------------------ACCACCAGCAGCAG------------------CAGC------------A------------------------------------------------------------C------------------------CAGCA---GCAGCAGCAGCAGGAGCACTACCAGCAG-----------------------------------------C---AGCAACAGAATATCGCC---AACAACGCCAAC------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGCG------GA---GGGGGCGGTSizeHit CountTotal NormTotal
No Reads
droTak1
AGCAACACCACAGCA---GCC------------------ACCACCAGCAACAG------------------CAGC------------AGCAG---CAAC---------------------AA---CAGCAGC------A---ACATCAG------------------------CAGCA---GCAGCAGCAACAAGAACACTACCAGCAG-----------------------------------------C---AACAACAGAATATTGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCACTCGCAGCAAAGCG------GA---GGAGGCGGTSizeHit CountTotal NormTotal
No Reads
droEle1
AGCAACACCACACCA---ATC------------------ACCACCAGCAACCG------------------CAACAGCAGCAACAGCAACAG---CAGC---------------------AACACCAGCAGC------A---ACAACAA------------------------CAGCA---GCAGCAGCAACAAGATCACTACCAGCAG-----------------------------------------C---AACAACAGAATATTGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCATTCACAGCAAAGCG------GC---GGAGGCGGTSizeHit CountTotal NormTotal
No Reads
droRho1
AGCAACACCACAACACCACTC------------------ACCACCAGCAACAG------------------CAGCAGC------AGCAACAA---CAACAGCAGCAGCAGC---------AACACCAGCAACAACAACA---ACAGCAG------------------------CAGCA---ACAGCAGCAACAAGAACACTACCAACAG-----------------------------------------C---AACAACAGAATATTGCC---AACAATGCCAAT------------CCATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTACCAGGACACCACCTCCTCGCATTCGCAGCAAAGTG------GC---GGAGGCGGTSizeHit CountTotal NormTotal
No Reads
droFic1
AGCAGCACCACAGCA---ACC------------------ACCACCAGCAGCAG------------------CAAC------------AGCAG---CAG---------------------------CAGCAGC------A---ACACCAG------------------------CAACA---GCAGCAGCAGCAAGAGCACTACCAGCAG-----------------------------------------C---AACAACAGAATATTGCC---AACAATGCCAAT------------CAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCACTCGCAGCAAAGTG------GA---GGGGGCGGTSizeHit CountTotal NormTotal
No Reads
droKik1
AGCAACACCACAATG---CCC------------------ACCACCAGCAACAA------------------CAGC------------AGCAGCAGCAAC------------------------AACAGCAGC------A---ACACCAGCAGCAGCAGCAACAACAGGAGCATTACCA---ACAACAA---------------CAGCAG-----------------------------------------C---AACAACAGAATATAGCC---AACAATGCCAAT------------CAATTCAACGCGTCATCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCATTCCCAACAAAGTGCCGGCGGCGGCGGAGGTGGCSizeHit CountTotal NormTotal
No Reads
droAna3
CGCACCACCAC--C------AACAGC----------------------AACAACAACACCAGCAGACGCAGCAGC---------------------AAC------------AACACCAACAACAGCAGCAGC---------------AA------------------------CAGCA---ACAACAGCAACAAGATCACTACCAA-----------------------------------------------CAACAACAGAATATTGTC---AACAATGCCAAT------------CAATTCAATGCCTCGTCCTACTCGTACATATACAATTTCGACTCACAGTACATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCCCAGCAGAGCG------G------GGGCGGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................ATTCCCGACAGGCTACCAGGACACCACCC.........................................2911.001010000
...............................................................................................................................................................................................................................................................................................................CAATGCCTCGTCCTACTCG...................................................................................................1911.001100000
.......................................................................................................................CAACAGCAGCAGC---------------AA------------------------CAGCA---ACA.............................................................................................................................................................................................................................................23200.357130003
.................................................................................................................CACCAACAACAGCAGCAGC---------------AA------------------------........................................................................................................................................................................................................................................................2130.331000001
.........................................................................................................................ACAGCAGCAGC---------------AA------------------------CAGCA---ACA.............................................................................................................................................................................................................................................21200.153000003
....................................................................................................................CAACAACAGCAGCAGC---------------AA------------------------CAGC....................................................................................................................................................................................................................................................22200.102010001
.....................................................................................................................AACAACAGCAGCAGC---------------AA------------------------CAGCA---ACA.............................................................................................................................................................................................................................................25200.102000002
.....................................................................................................................AACAACAGCAGCAGC---------------AA------------------------CAGCA---AC..............................................................................................................................................................................................................................................24200.102000002
...........................................................................................................................AGCAGCAGC---------------AA------------------------CAGCA---ACAACAGC........................................................................................................................................................................................................................................24200.051010000
....................................................................................................................CAACAACAGCAGCAGC---------------AA------------------------CAGCA---AC..............................................................................................................................................................................................................................................25200.051010000
.....................................................................................................................AACAACAGCAGCAGC---------------AA------------------------CAGC....................................................................................................................................................................................................................................................21200.051000010
.......................................................................................................................CAACAGCAGCAGC---------------AA------------------------CAGCA---................................................................................................................................................................................................................................................20200.051010000
..........................................................................................................................CAGCAGCAGC---------------AA------------------------CAGCA---ACAAC...........................................................................................................................................................................................................................................22200.051010000
.......................................................................................................................CAACAGCAGCAGC---------------AA------------------------CAGC....................................................................................................................................................................................................................................................19200.051100000
.....................................................................................................................AACAACAGCAGCAGC---------------AA------------------------CAGCA---................................................................................................................................................................................................................................................22200.051100000
droBip1
CGCACCACCA--AC------AACAGC-A--------A----CACCAGCAGCAG------------------CAGC------------AACAC---CAGC---AAC---------------AGCAGCAACAAC------A---ACACCAG------------------------CAACA---ACAACAGCAACAAGATCACTACCAACAA-----------------------------------------CAACAACAACAGAATATTGCC---AACAACGCCAAC------------CAATTCAACTCCTCATCCTACTCGTACATATACAATTTCGACTCACAGTACATATTCCCGACAGGCTACCTGGACACCACCTCCTCGCACTCGCAGCAGAGCG------G------GGGCGGTSizeHit CountTotal NormTotal
No Reads
dp5
AGCAACAGCA--GC------AGCAGC-ACCACAGCACGCACCACCAGCAGCAG------------------CAGC------------AGCAG---CAGC---------------------AGTCCGACCAGC---------------------------------AGGGGCACTACCA---ACAGCAGCAGCA--------------------------------------------------GCAGCAGCAGCAACAACAGAATATTGCC---AACAACGCCAAC------------CAATTCAACTCCTCGTCCTACTCGTATATATACAACTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGTG------GCGGTGGGGGCGGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................ACAGGCTACCAGGACACCA............................................1911.0010010000000
...............................................................................................................................................................................................CA--------------------------------------------------GCAGCAGCAGCAACAACAGAATATTGC.......................................................................................................................................................2911.0010010000000
...........................................................................................................................................................................................................................................................................................................................................................................CTACCAGGACACCACCTCCTCCC...................................2311.0010010000000
............................................................................................................................................................................................................................................................GCAACAACAGAATATTGCC---A..................................................................................................................................................2011.0010000100000
.......................................................................................................................................................................................................................................................................ATATTGCC---AACAACGCCAAC------------...........................................................................................................................2011.0010010000000
............................................................................................................................................................................CTACCA---ACAGCAGCAGCA--------------------------------------------------GC................................................................................................................................................................................2020.5010100000000
..........................................................................................AG---CAGC---------------------AGTCCGACCAG..................................................................................................................................................................................................................................................................................................1730.3310000000001
................................................................................................................................................................................................A--------------------------------------------------GCAGCAGCAGCAACAACA................................................................................................................................................................19200.1020200000000
................................................................................................................................................................................CA---ACAGCAGCAGCA--------------------------------------------------GCAGCAGCAGCAAC....................................................................................................................................................................28190.0510001000000
...........................................................................................................................................................................................GCAGCA--------------------------------------------------GCAGCAGCAGCAACAAC.................................................................................................................................................................23200.0510000100000
.........................................CACCAGCAGCAG------------------CAGC------------AGC...........................................................................................................................................................................................................................................................................................................................................19200.0510100000000
........................................CCACCAGCAGCAG------------------CAGC------------AG............................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.....................................GCACCACCAGCAGCAG------------------CAGC------------A.............................................................................................................................................................................................................................................................................................................................................21200.0510000100000
......................................CACCACCAGCAGCAG------------------CAGC------------A.............................................................................................................................................................................................................................................................................................................................................20200.0510100000000
droPer2
AGCAACAGCA--GC------AGCAGC-ACCACAGCACGCACCACCAGCAGCAG------------------CAGC------------AGCAG---CAGT---------------------CCGACCAGCAGG------G---GCA---C------------------------TACCA---ACAGCAGCAGCA--------------------------------------------------GCAGCAGCAGCAACAACAGAATATTGCC---AACAACGCCAAC------------CAATTCAACTCCTCGTCCTACTCGTATATATACAACTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGTG------GCGGTGGGGGCGGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................A--------------------------------------------------GCAGCAGCAGCAACAAC.................................................................................................................................................................18200.051010000
.......................................ACCACCAGCAGCAG------------------CAGC------------AGCA..........................................................................................................................................................................................................................................................................................................................................22200.051010000
................................................................................................................................................................................CA---ACAGCAGCAGCA--------------------------------------------------GCAGCAGCAGC.......................................................................................................................................................................25200.051001000
droWil2
GGCGGCGGCG--GC------AATAGT-GGAGG----------------------------------------------------------------------------------------------AGGAGC----------------T------------------------CATCA---GCAGCAGCAGCAACAACATTACCAGCAACAGAATCTATCAAATAATGCCAATAATAACAACAACAA-----------------------C---AACAACAACAAT------------CAATTCACATCCCAATCCTATTCGTATATATACAATTTTGATTCACAGTATATATTCCCAACAGGCTATCAAGATACCACATCCTCACACTCGCAACAAAGCG---GCGGTGGTGGAGGAGGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................ATCCCAATCCTATTCGTATAT..............................................................................................2111.00100010
.....................ATAGT-GGAGG----------------------------------------------------------------------------------------------AGGAGC----------------T------------------------C.......................................................................................................................................................................................................................................................1811.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................CAAAGCG---GCGGTGGTGGAGGA...2111.00100010
.......................................................................................................................................................................................................................................................................................................................................................CAGTATATATTCCCAACAG...........................................................1911.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................ACAAAGCG---GCGGTGGTGGAGGAGGT2511.00101000
............................................................................................................................................................................................................................................................................................................................................................................TATCAAGATACCACATCCTCACACTCG..............................2711.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................AAGCG---GCGGTGGTGGAGGAGG.2111.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................AAGCG---GCGGTGGTGGAGGA...1911.00100010
.GCGGCGGCG--GC------AATAGT-GGAGG----------------------------------------------------------------------------------------------A......................................................................................................................................................................................................................................................................................................2311.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................CG---GCGGTGGTGGAGGAGG.1870.14100010
..............................................................................................................................................................................ATCA---GCAGCAGCAGCAACA.................................................................................................................................................................................................................................19200.05100010
droVir3
ATCAGCAGCA--GC------AACAAC-AACATCACACGCATCACCAGCAACAG------------------CAAC------------AACAA---CAAC---------------------AACATTACCAAC------A---------A------------------------CAACAACAGCAGCAGC------------AGCAG--------------------------------------------CAACAACAACAAAATATTGCCAGCAACAATACGAAT---GCCGCGAACCAATTCAACGCCTCCTCTTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGGTATCAGGAAACGAACTCATCTCATTCACAGCAAAGCG------GC---AATGGAGCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................CGTATATATACAATTTCGAT.................................................................................2012.002000000000000000000000000000000000000000000000000000000000000002
..................................................................................................................................................................................................................................................................................................CCGCGAACCAATTCAACGCCTCCT...........................................................................................................2411.001000000000000000000000000000000000000000000000000000000000010000
........................AC-AACATCACACGCATCACCAGCAACA.................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CATTCACAGCAAAGCG------GC---A........1911.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................AAC------A---------A------------------------CAACAACAGCAGCAGC------------A...........................................................................................................................................................................................................................22200.153003000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................C------A---------A------------------------CAACAACAGCAGCAGC------------AG..........................................................................................................................................................................................................................21200.153000000000000000000000000001000000000002000000000000000000000000
....................................................................................................................................................A------------------------CAACAACAGCAGCAGC------------AGCAG--------------------------------------------CAAC.......................................................................................................................................................................26200.102001000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................AGC------------AGCAG--------------------------------------------CAACAACAACA................................................................................................................................................................19200.102000000000000000000000000000000000000200000000000000000000000000
.............................................................................................................................................................................CAACAACAGCAGCAGC------------AGCAG--------------------------------------------CAAC.......................................................................................................................................................................25200.051000000000000000001000000000000000000000000000000000000000000000
................................................AACAG------------------CAAC------------AACAA---CAAC---------------------AAC..........................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
....GCAGCA--GC------AACAAC-AACAT.....................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000100000000000000000000000000000000
.................................................................................................................................................................................AACAGCAGCAGC------------AGCAG--------------------------------------------CAACA......................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................A---------A------------------------CAACAACAGCAGCAGC------------AG..........................................................................................................................................................................................................................20200.051000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................CAACAGCAGCAGC------------AGCAG--------------------------------------------CAA........................................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................C------A---------A------------------------CAACAACAGCAGCAGC------------AGC.........................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................C------A---------A------------------------CAACAACAGCAGCAGC------------............................................................................................................................................................................................................................19200.051000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CAGC------------AGCAG--------------------------------------------CAACAACAACA................................................................................................................................................................20200.051000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................AACAACAGCAGCAGC------------AGCA........................................................................................................................................................................................................................19200.051000000000000000000000000000000000100000000000000000000000000000
............................................CAGCAACAG------------------CAAC------------AACAA---CAAC---------------------A............................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................A---------A------------------------CAACAACAGCAGCAGC------------AGCAG--------------------------------------------CA.........................................................................................................................................................................25200.051000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................AGCAGCAGC------------AGCAG--------------------------------------------CAACAAC....................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CAACAGCAGCAGC------------AGCAG--------------------------------------------CA.........................................................................................................................................................................20200.051000100000000000000000000000000000000000000000000000000000000000
droMoj3
G---------------------------------CAAT---CATCAGCAGCAG------------------CATC---------CACAGCAG---CAGC---------------------AACAGCAGCACC------TTAATGCGCAT------------------------CATCA---GCAACAGCAACAACAACAGTATCAACAG-----------------------------------------C---AACAACAGAATATTGCCAGCAACAATGCGAATAGTGCAGCGAACCAATTCAATGCCTCCTCTTATTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGAAACCAATTCGTCTCATTCGCAGCAAAGCG------GT---AACGGCACCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................GAAACCAATTCGTCTCATTC...............................2011.001100000
..............................................................................................................................................................................................................................................................................................................................................TTCGATTCACAGTATATATTTCC................................................................2311.001000010
.........................................................................................CAG---CAGC---------------------AACAGCAGCACC------...........................................................................................................................................................................................................................................................................................19200.102000020
........................................................................................GCAG---CAGC---------------------AACAGCAGCACC------...........................................................................................................................................................................................................................................................................................20200.051000010
droGri2
AGCAGCAGCA--GC------AACACT-CACATCACACACATCACCAGCAGCAG------------------CAGC---------AGCA---------AC---------------------AACAGCAGCA------------------------------------------------------------------GCATTACCAACAG-----------------------------------------CAACAACAACAAAATATTGCC---AACAATGCGAATGCAGCGGCGAACCAATTCAATGCTTCCTCCTATTCGTATATATACAATTTCGATTCACAGTACATATTCCCGACAGGCTATCAGGAAACGAACTCATCCCATTCGCAGCAAAGTG------CA---AATGGAGCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................ACACT-CACATCACACACATCACC........................................................................................................................................................................................................................................................................................................................................................................................2311.00110
...................................................................................................................................................................................................................................................................................................................................................................CCGACAGGCTATCAGGAAACGAACT.........................................2511.00110
............................ACATCACACACATCACCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................2311.00110
..................................................................................................................................................................................................................................................................................AACAATGCGAATGCAGCGGCG..............................................................................................................................2120.50101
.................................................GCAG------------------CAGC---------AGCA---------AC---------------------AACAGCA......................................................................................................................................................................................................................................................................................................21200.10220
............................................................................................................................................................................................................AACAG-----------------------------------------CAACAACAACAAAAT............................................................................................................................................................20200.05110
......................................CATCACCAGCAGCAG------------------CAGC---------A................................................................................................................................................................................................................................................................................................................................................20200.05110

Generated: 05/17/2015 at 11:15 PM