ID:

dya_794

 Coordinate:

3L:14485375-14485525 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.1 -2.8 -2.7

Flybase annnotation

exon [dyak_GLEANR_3873:3]; CDS [Dyak\GE20023-cds]; intron [Dyak\GE20023-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAATACAAATTTCCGTAAGGAGTAATTTTTTCTAAATAATACTTTGTTGGCAATTTATAGTCATGACATCTTCTTCTAAATTATTTAATGACATTGGGTTATACAATGTATATGATATTTGAAGATATATTAAAAATTGTTATTCGTAAGACTAAGTTGGGTATTTCAATTTTTATTAAATTATAAAACTCTTTCTTATAGCTGCAAACCAGCTGCCCGATATCTCCGTGGCTGGCGATGCCAAGTTTGAT
***********************************************************************************************************...........(((.((((((..(((.....(((........)))....))).))))))))).********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V120
male body		 M056
embryo
 V058
head
.........................................................................................................................................................................................................CTGCAAACCAGCTGCCCGAT.............................. 20 0 1 2.00 2 1 0 1 0
............................................................................................................................................................................................................................TATCTCCGTGGCTGGCGATGC.......... 21 0 1 2.00 2 1 0 0 1
...............................................................................................................................................................................................................................CTCCGTGGCTGGCGATGCC......... 19 0 1 1.00 1 1 0 0 0
..ATACAAATTTCCGTAAGGAGT.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
...........................................................................................................GTATATGATATTTGAAGATAT........................................................................................................................... 21 0 1 1.00 1 0 1 0 0
................................................................................................................................................................................................................................TCCGTGGCTGGCGATGCCAAGTTTGA. 26 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................GCTGCCCGATATCTCCGTGGCTGG................ 24 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................GCCCGATATCTCCGTGGCTGGC............... 22 0 1 1.00 1 0 0 1 0
.................................................................................................................................................................................................................CAGCTGCCCGATATCTCCGTGGCT.................. 24 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................................AACCAGCTGCCCGATATCTCCGTGGCT.................. 27 0 1 1.00 1 1 0 0 0
...............................CTAAATAATACTTTGTTGGCA....................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................AAGGCTGCAAACCAGCTGCCCGATATCTC......................... 29 2 1 1.00 1 0 0 1 0
..............................................................................................................................................................................................................AACCAGCTGCGCGATATC........................... 18 1 1 1.00 1 1 0 0 0
...TACAAATTTCCGTAAGGAGTAATT................................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................AGCTGCCCGATATCTCCGTG..................... 20 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................................TATCTCCGTGGCTGGCGAT............ 19 0 1 1.00 1 0 1 0 0
.............................................................................................................................................ATTCGTAAGACTAAGTTGGGTATTTCAAT................................................................................. 29 0 1 1.00 1 0 1 0 0
...........................................................................................................GTATATGATATTTGAAGAT............................................................................................................................. 19 0 1 1.00 1 1 0 0 0
..ATACAAATTTCCGTAAGGAGTAAT................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0
..........................................................................................................................................................................................................................GATATCTCCGTGGCTGGCG.............. 19 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................................TGCCCGATATCTCCGTGGCTGGCG.............. 24 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................................CTGCCCGATATCTCCGTGGCTGGC............... 24 0 1 1.00 1 1 0 0 0
.................................................................................................................................................GTAAGACTAAGTTGGGTATTTCAATTT............................................................................... 27 0 1 1.00 1 0 1 0 0
...........................................................................................................................................................................................................GCAAACCAGCTGCCCGATAT............................ 20 0 1 1.00 1 0 0 1 0
...................................................................................................TATACAATGTATATGATATTTGAAGATAT........................................................................................................................... 29 0 1 1.00 1 1 0 0 0
...................................................AATTTATAGTCATGACATCTT................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0
............................................................................................................................................TATTCGTAAGACTAAGTTGGGTATTTC.................................................................................... 27 0 1 1.00 1 0 1 0 0
.............................................................................................................................................................................................................................ATCTCCGTGGCTGGCGATGCCAAGTTT... 27 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................................................CTCCGTGGCTGGCGATGCCA........ 20 0 1 1.00 1 1 0 0 0
..............................................................................................TGGGTTATACAATGTATATG......................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................................................CTCCGTGGCTGGCGATGCCAAGTTTG.. 26 0 1 1.00 1 1 0 0 0
...........................................................................................................................................................................................................................ATATCTCCGTGGCTGGCGATGCC......... 23 0 1 1.00 1 1 0 0 0
....................................................................................................................ATTTGAAGATATATTAAAA.................................................................................................................... 19 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................................................................CTGCAAACCAGCTGCCCGATAT............................ 22 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................................................................CTGCAAACCAGCTGCCCGATATCTCC........................ 26 0 1 1.00 1 1 0 0 0
............................................................TCTTGACATCTTCTGTTAA............................................................................................................................................................................ 19 3 20 0.15 3 3 0 0 0
...........................................................GTCTTGACATCTTCTGTTAA............................................................................................................................................................................ 20 3 10 0.10 1 1 0 0 0
........................................................................................................ACTGTATGTGATATTTAAAGA.............................................................................................................................. 21 3 12 0.08 1 0 1 0 0

Anti-sense strand reads

TTTATGTTTAAAGGCATTCCTCATTAAAAAAGATTTATTATGAAACAACCGTTAAATATCAGTACTGTAGAAGAAGATTTAATAAATTACTGTAACCCAATATGTTACATATACTATAAACTTCTATATAATTTTTAACAATAAGCATTCTGATTCAACCCATAAAGTTAAAAATAATTTAATATTTTGAGAAAGAATATCGACGTTTGGTCGACGGGCTATAGAGGCACCGACCGCTACGGTTCAAACTA
*********************************************************************************...........(((.((((((..(((.....(((........)))....))).))))))))).*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V058
head
 M056
embryo
..............................................................................................ACCCCATATGTTACTTAT........................................................................................................................................... 18 2 12 0.08 1 1 0
..............CACTCCTCATTTAAAAAGG.......................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3L:14485325-14485575 - dya_794 AAATACAAATTTCCGTAAGGAGTAATTTTTTCTAAATAATACTTTGTTGGCAATTTATAGTCATGACATCT-------------------------------------------------------------------TCTT--------------------------------------------------------------------------------------CTAAATTATTTAATGACA-TTGGGTTATAC----------AATGTA---------------------TATGATATTTGAAGATATATTAAAAATTG-----TTATTCGTAAGACTAAGTTGGGTATTTCAATTTTTATTAA----------------------ATTATAA-------AACTCTTTCTTATAGCTGCAAACCAGCTGCCCGATATCTCCGTGGCTGGCGATGCCAAGTTTGAT
droEre2 scaffold_4784:14374105-14374350 - AATTAC---TTACCTTAAGAATTACATTTTTGTAAATAATATGTTATTAGCAATTACTTGCTGTGAAA-----------------------------------------TGAT-----------------GTCAATACGCTG--------------------------------------------------------------------------------------CTCCT---AGCATTGATTATTGGGACATATTTTGGAGTA----------------------------TAGGATAT-------------------TGTTAAAGCATTCGTAACATTAAGTTCGAT-TTTAAGTTTGTATTAC-------------------TATATTATAC-------AAATTTTTCTTATAGCTGCAAACCAGCTGCCCGATATCTCAGTGGCCGGCGATGCCAAGTTCGAT
droSec2 scaffold_0:6530296-6530504 - TTACC----------------------TTTTCATAAAAATATTTTATGTGCAATTTTTTGTCATGTCTTCTG------------------------------------GAAAT-----------------ATGAAAGTGCTG--------------------------------------------------------------------------------------CTCAT---ATTATTGATAA-GGGGAAATATATTT-------------------------------------------------------------------GTATTCATAAGATTAACTTTGGTATTTAAATTTAAATTCA----------------------ATTTTAA-------AATTATTTTTTATAGCCGCCAATCAGCTGCCCGATATCTCTGTGGCTGGCGATGCCAAGTTCGAT
droSim2 3l:14056021-14056236 - TTACC----------------------TTTTCATAAAAATATTTTATGTGCAATTTTTTGTCATGTCTTCTA------------------------------------GAAAT-----------------ATGAAAGTGCTG--------------------------------------------------------------------------------------CTCAT---AGCATTGATAA-GGGGAAATATATTT-------------------------------------------------------------------GTATTCATAAGATTAACTTTGGTATTTAAATTTAAATTCA----------------------ATTTTAAAATTTAAAATTATTTTTTATAGCTGCCAATCAGCTGCCCGATATCTCTGTGGCTGGCGATGCCAAGTTTGAT
dm3 chr3L:14394015-14394282 - AATAACC-------TAGAAAGTTA----CTCCTTAAAAATATATTATGTGCAATTTTTTGTCATGACTTCTG------------------------------------GTAAT-----------------ATTAAATTTCTG--------------------------------------------------------------------------------------CTCAT---AACATTGATAA-GGATAAATATTTTTGAGAGCAAGATATTGTACGATATATATATCGTACATAATAT-------------------TGCTTAAGTATTCATAAGATTAACTTTGGTATTTAAATTTAAATTCA----------------------ATTTCAA-------AATTCTTTCTTATAGCTGCCAATCAGCTGCCCGATATCTCTGTGGCTGGCGATGCCAAGTTTGAT
droEug1 scf7180000409456:619243-619312 - AATTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--------TTTTGTTTTTCTAGCTGCTAACCA---ACCCGATATTTCCGTGGCAAGCGATGCCAAATTCGAT
droBia1 scf7180000302428:5495613-5495872 + ATTTTTGAGTTTATATTAAAAC-AATC--------------------------------------------TTA--------TCTAATAGA----------------------------------------------------------------------------------TTATTACCTTTATTGCTTTTAAAGGAAAGGT-CCCAATAATCATAATAATACGTATTAAAAAAT-------TA-TTAGGAAATTC----------AATACATTATACGCTT---ATTTC-TAGAGAAAATTTAAAGTTACAATAAAAACT---------------------------------------------ATTTTGGAAACGTATGGTTTTAATTTATAC-------TATTTTTTCTTATAGCTGCTAACCAGGTGCCCGATATGTCCGTCGCCAGCGACGCCAAGTTCGAT
droTak1 scf7180000415135:48592-48669 - TTATTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAA-------TATATTTTCTTATAGCTGCCAACCAGCTGCCCGATATTTCCGTCGCTGACGATGCCACATTCGAT
droEle1 scf7180000491199:1518213-1518294 - TTTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAA----------------------CCATTAT-------TTTTCTTGTTCATAGTCGCCAAGCAGCTGCCCGATATCTCCGTGGCCAGCGATGCCGACTTCGAT
droRho1 scf7180000772518:22647-22900 - AAAGCTTAGTTTCCGCAAGGAC-A--------------------------------------------ACTTAAAAATGTTATTTAAAATTTTTAAATTGGCTATAAAGCAATAACATAAATGTTATAAATTGAAAATGCGGAAATTAAA--ATATAATTACTTTTATATTTACTGATA-------------------------------------------------CTTAT---GGTGTT----A-GGGAAAATATATT-------------------------------------------------------AAATTGTA-----TTATTTCTAAAAT-AACT--------------------------------------------CTTTCTT-------TCTTCTTCTTTATAGCCGCCAAGCAGCTGCCCGATATATCCGTGGCCAGCGACGCCGATTTCGAT
droFic1 scf7180000453784:734657-734705 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCGATCTGATTCCCGATATCTCGGTGGCCAGCGATGCCGATTTCGAT
droKik1 scf7180000302441:445211-445259 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCGATCTGATCCCCGATATCTCTGTGGCCAGCGATGCTGATTTCGAT
droAna3 scaffold_13337:4678255-4678299 + A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACTTGCCCGACATCTCCGTGAAGAGCGATGCCGACTTCGAC
droBip1 scf7180000396371:5555-5592 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCCGATATGTCCGTAGCCAGCGATGCTGATTTCGAT
dp5 XR_group6:7070615-7070650 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGACATCTCCGTGGCCAGCGATGCTGACTTCAAT
droPer2 scaffold_41:434441-434476 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGACATCTCCGTGGCCAGCGATGCTGACTTCAAT
droMoj3 scaffold_6680:16492568-16492636 + TTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCA-------AATCCTCCCAAATAGTTGCCGCCTTGGTGCCCGACATGTCCGTGGCCAGCGATGCTGAGT-----
droGri2 scaffold_15110:21621833-21622071 - ATATTTAAGGTTTTTCAAGGGT-ATTT--------------------------------------------CTA--------ACTGTAAA--------------------------------------------------------TAAAATATATAGTCGCTGATCTCGTTCCCGACATGTCTGTTGCTGCCGATGGTCAGGATGCAAGTAAGCACAATT---------------------AACTA-GTAAATGTATAAT---------------------------TCTC-TTAAAAGAATAT---------------------------------------------ATATTCTAATTGTAATCCACATCCAAAATATA--------------------------TAGTCAATGTCGATGCCGATCTGATTCCCGACATGTCCGTCGCCAGCGATGCCGAGT-AGGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
AAATACAAATTTCCGTAAGGAGTAATTTTTTCTAAATAATACTTTGTTGGCAATTTATAGTCATGACATCT-------------------------------------------------------------------TCTT--------------------------------------------------------------------------------------CTAAATTATTTAATGACA-TTGGGTTATAC----------AATGTA---------------------TATGATATTTGAAGATATATTAAAAATTG-----TTATTCGTAAGACTAAGTTGGGTATTTCAATTTTTATTAA----------------------ATTATAA-------AACTCTTTCTTATAGCTGCAAACCAGCTGCCCGATATCTCCGTGGCTGGCGATGCCAAGTTTGATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAACCAGCTGCCCGAT..............................2012.00201100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTCCGTGGCTGGCGATGC..........2112.00201000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGGCTGGCGATGCC.........1911.00101000000000
..ATACAAATTTCCGTAAGGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...............................................................................................................................................................................................................................................................................GTA---------------------TATGATATTTGAAGATAT.............................................................................................................................................................2111.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGGCTGGCGATGCCAAGTTTGA.2611.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCCGATATCTCCGTGGCTGG................2411.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGATATCTCCGTGGCTGGC...............2211.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGCCCGATATCTCCGTGGCT..................2411.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGCTGCCCGATATCTCCGTGGCT..................2711.00101000000000
...............................CTAAATAATACTTTGTTGGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...TACAAATTTCCGTAAGGAGTAATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCCCGATATCTCCGTG.....................2011.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTCCGTGGCTGGCGAT............1911.00100000010000
...........................................................................................................................................................................................................................................................................................................................................ATTCGTAAGACTAAGTTGGGTATTTCAAT..............................................................................................................2911.00100000010000
...............................................................................................................................................................................................................................................................................GTA---------------------TATGATATTTGAAGAT...............................................................................................................................................................1911.00101000000000
..ATACAAATTTCCGTAAGGAGTAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCTCCGTGGCTGGCG..............1911.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGATATCTCCGTGGCTGGCG..............2411.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCCGATATCTCCGTGGCTGGC...............2411.00101000000000
...............................................................................................................................................................................................................................................................................................................................................GTAAGACTAAGTTGGGTATTTCAATTT............................................................................................................2711.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAACCAGCTGCCCGATAT............................2011.00100100000000
.............................................................................................................................................................................................................................................................TATAC----------AATGTA---------------------TATGATATTTGAAGATAT.............................................................................................................................................................2911.00101000000000
...................................................AATTTATAGTCATGACATCT-------------------------------------------------------------------T...........................................................................................................................................................................................................................................................................................................................................2111.00100100000000
..........................................................................................................................................................................................................................................................................................................................................TATTCGTAAGACTAAGTTGGGTATTTC.................................................................................................................2711.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCCGTGGCTGGCGATGCCAAGTTT...2711.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGGCTGGCGATGCCA........2011.00101000000000
........................................................................................................................................................................................................................................................TGGGTTATAC----------AATGTA---------------------TATG...........................................................................................................................................................................2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGGCTGGCGATGCCAAGTTTG..2611.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTCCGTGGCTGGCGATGCC.........2311.00101000000000
.............................................................................................................................................................................................................................................................................................................ATTTGAAGATATATTAAAA......................................................................................................................................................1911.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAACCAGCTGCCCGATAT............................2211.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAACCAGCTGCCCGATATCTCC........................2611.00101000000000
droEre2
AATTAC---TTACCTTAAGAATTACATTTTTGTAAATAATATGTTATTAGCAATTACTTGCTGTGAAA-----------------------------------------TGAT-----------------GTCAATACGCTG--------------------------------------------------------------------------------------CTCCT---AGCATTGATTATTGGGACATATTTTGGAGTA----------------------------TAGGATAT-------------------TGTTAAAGCATTCGTAACATTAAGTTCGAT-TTTAAGTTTGTATTAC-------------------TATATTATAC-------AAATTTTTCTTATAGCTGCAAACCAGCTGCCCGATATCTCAGTGGCCGGCGATGCCAAGTTCGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAACCAGCTGCCCGATATCTCA........................2613.0032001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCCGATATCTCAGTGGCCGGC...............2412.0021001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGATATCTCAGTGGCCGGC...............2312.0022000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAACCAGCTGCCCGAT..............................2011.0010000010
............................................................................................................................................................................................................................................AGCATTGATTATTGGGAC........................................................................................................................................................................................................................1811.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAACCAGCTGCCCGATATCTC.........................2511.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATATCTCAGTGGCCGGCGAT............2211.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTCAGTGGCCGGCGATGCCAA.......2411.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGATATCTCAGTGGCCGGCGATGCC.........2911.0011000000
........................................................................................................................................................................................................................................................................GTA----------------------------TAGGATAT-------------------TGTTAAAGCATTCGTA....................................................................................................................................2711.0011000000
...................................................................................................................................................................................................................................................ATTATTGGGACATATTTTGGAGT............................................................................................................................................................................................................2311.0010001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCCCGATATCTCAGTGGCCGGC...............2611.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCCCGATATCTCAGTGGCC..................2311.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCCGGCGATGCCAAGTTCG..2211.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGATATCTCAGTGGCCGGC...............2111.0011000000
........................................................CTTGCTGTGAAA-----------------------------------------TGAT-----------------GTT.................................................................................................................................................................................................................................................................................................................................................1911.0010001000
droSec2
TTACC----------------------TTTTCATAAAAATATTTTATGTGCAATTTTTTGTCATGTCTTCTG------------------------------------GAAAT-----------------ATGAAAGTGCTG--------------------------------------------------------------------------------------CTCAT---ATTATTGATAA-GGGGAAATATATTT-------------------------------------------------------------------GTATTCATAAGATTAACTTTGGTATTTAAATTTAAATTCA----------------------ATTTTAA-------AATTATTTTTTATAGCCGCCAATCAGCTGCCCGATATCTCTGTGGCTGGCGATGCCAAGTTCGATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGGCTGGCGATGCCAAGTTCG..2411.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCCGATATCTCTGT......................1811.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGGCTGGCGATGCC.........1911.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTGGCTGGCGATGCCAAG......2111.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGGCTGGCGATGCCAAGTTC...2311.0010010
droSim2
TTACC----------------------TTTTCATAAAAATATTTTATGTGCAATTTTTTGTCATGTCTTCTA------------------------------------GAAAT-----------------ATGAAAGTGCTG--------------------------------------------------------------------------------------CTCAT---AGCATTGATAA-GGGGAAATATATTT-------------------------------------------------------------------GTATTCATAAGATTAACTTTGGTATTTAAATTTAAATTCA----------------------ATTTTAAAATTTAAAATTATTTTTTATAGCTGCCAATCAGCTGCCCGATATCTCTGTGGCTGGCGATGCCAAGTTTGATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGGCGATGCCAAGTTTG..2011.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCAATCAGCTGCCCGATATCTCTGT......................2811.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCCGATATCTCTGTGGCTG.................2311.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGCCCGATATCTCTGTGGCTGGC...............2711.00100010000000000000
dm3
AATAACC-------TAGAAAGTTA----CTCCTTAAAAATATATTATGTGCAATTTTTTGTCATGACTTCTG------------------------------------GTAAT-----------------ATTAAATTTCTG--------------------------------------------------------------------------------------CTCAT---AACATTGATAA-GGATAAATATTTTTGAGAGCAAGATATTGTACGATATATATATCGTACATAATAT-------------------TGCTTAAGTATTCATAAGATTAACTTTGGTATTTAAATTTAAATTCA----------------------ATTTCAA-------AATTCTTTCTTATAGCTGCCAATCAGCTGCCCGATATCTCTGTGGCTGGCGATGCCAAGTTTGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCAATCAGCTGCCC.................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCGATGCCAAGTTTGAT2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCCCGATATCTCTGT......................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCTCTGTGGCTGGCGAT............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGATATCTCTGTGGCTGGC...............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGACTTCTG------------------------------------GTAAT-----------------ATTA................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGATATCTCTGTGGC...................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGATATCTCTGTGGCT..................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCCAAGTTTGAT1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGATATCTCTGTGGCTGGCGG.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGGCTGGCGATGCCAAGT.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGCGATGCCAAGTTTG..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCTCTGTGGCTGGCGG.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGATATCTCTGTGG....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGGCTGGCGATGCCAAGTTTGAT2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTGTGGCTGGCGAT............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGATATCTCTGTGGCT..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATATCTCTGTGGCTGGCG..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCCGATATCTCTGTGGCT..................2211.0010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCCCGATATCTCTGTG.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAATCAGCTGCCCGAT..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGATATCTCTGTGGCTGGG...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCTCTGTGGCTGG................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTCTGTGGCTGGCGATGCC.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGCCCGATATCTCTGTGGC...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTCTGTGGCTGGCGAT............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGGCGATGCCAAGTTTG..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGGCTGGCGATGCCAAGT.....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCTCTGTGGCTGGC...............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ATATTATGTGCAATTTTT............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGATATCTCTGTGGCTGG................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCTCTGTGGCTGGG...............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................ATCGTACATAATAT-------------------TGCTTAAGTA..........................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCAATCAGCTGCCCGATAT............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAATCAGCTGCCCGAT..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGGCTGGCGATGC..........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
AATTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--------TTTTGTTTTTCTAGCTGCTAACCA---ACCCGATATTTCCGTGGCAAGCGATGCCAAATTCGATSizeHit CountTotal NormTotal
No Reads
droBia1
ATTTTTGAGTTTATATTAAAAC-AATC--------------------------------------------TTA--------TCTAATAGA----------------------------------------------------------------------------------TTATTACCTTTATTGCTTTTAAAGGAAAGGT-CCCAATAATCATAATAATACGTATTAAAAAAT-------TA-TTAGGAAATTC----------AATACATTATACGCTT---ATTTC-TAGAGAAAATTTAAAGTTACAATAAAAACT---------------------------------------------ATTTTGGAAACGTATGGTTTTAATTTATAC-------TATTTTTTCTTATAGCTGCTAACCAGGTGCCCGATATGTCCGTCGCCAGCGACGCCAAGTTCGATSizeHit CountTotal NormTotal
No Reads
droTak1
TTATTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAA-------TATATTTTCTTATAGCTGCCAACCAGCTGCCCGATATTTCCGTCGCTGACGATGCCACATTCGATSizeHit CountTotal NormTotal
No Reads
droEle1
TTTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAA----------------------CCATTAT-------TTTTCTTGTTCATAGTCGCCAAGCAGCTGCCCGATATCTCCGTGGCCAGCGATGCCGACTTCGATSizeHit CountTotal NormTotal
No Reads
droRho1
AAAGCTTAGTTTCCGCAAGGAC-A--------------------------------------------ACTTAAAAATGTTATTTAAAATTTTTAAATTGGCTATAAAGCAATAACATAAATGTTATAAATTGAAAATGCGGAAATTAAA--ATATAATTACTTTTATATTTACTGATA-------------------------------------------------CTTAT---GGTGTT----A-GGGAAAATATATT-------------------------------------------------------AAATTGTA-----TTATTTCTAAAAT-AACT--------------------------------------------CTTTCTT-------TCTTCTTCTTTATAGCCGCCAAGCAGCTGCCCGATATATCCGTGGCCAGCGACGCCGATTTCGATSizeHit CountTotal NormTotal
No Reads
droFic1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCGATCTGATTCCCGATATCTCGGTGGCCAGCGATGCCGATTTCGATSizeHit CountTotal NormTotal
No Reads
droKik1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCGATCTGATCCCCGATATCTCTGTGGCCAGCGATGCTGATTTCGATSizeHit CountTotal NormTotal
No Reads
droAna3
A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACTTGCCCGACATCTCCGTGAAGAGCGATGCCGACTTCGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTGCCCGACATCTCCGTGAAGAGC...............2817.007010060
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCCGTGAAGAGCGATGCCGACT.....2512.002110000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGCCCGACATCTCCGTGAAGAGC...............2612.002000011
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCGTGAAGAGCGATGCC.........2012.002010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGACATCTCCGTGAAGAGC...............2212.002000020
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGACATCTCCGTGAAGAGC...............2311.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCCGTGAAGAGCGATGCCGA.......2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTGCCCGACATCTCCGTGA....................2311.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACATCTCCGTGAAGAGCGAT............2211.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGAAGAGCGATGCCGACTTC...2511.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTGCCCGACATCTCCGTGAAGA.................2611.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTGCCCGACATCTCCGTGAA...................2411.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATCTCCGTGAAGAGCGAT............2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCCCGACATCTCCGTGAAGA.................2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATCTCCGTGAAGAGC...............1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATCTCCGTGAAGAGCGATGCC.........2411.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACTTGCCCGACATCTCCGT......................2211.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGAAGAGCGATGCCGAC......2111.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACATCTCCGTGAAGAGCGATGCC.........2511.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCGTGAAGAGCGATGCCGACC.....2411.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCCGTGAAGAGCGATGCC.........2111.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCCCGACATCTCCGTGAAGAGC...............2511.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGCCCGACATCTCCGTGAA...................2211.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTGCCCGACATCTCCA.......................2011.001100000
droBip1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCCGATATGTCCGTAGCCAGCGATGCTGATTTCGATSizeHit CountTotal NormTotal
No Reads
dp5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGACATCTCCGTGGCCAGCGATGCTGACTTCAATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGGCCAGCGATGCTG........2011.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGGCCAGCGATGCTGACTTC...2511.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGGCCAGCGATGCTGACTT....2411.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCCGTGGCCAGCGATGCT.........2111.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCCGTGGCCAGCGATGC..........2011.0010000001000
droPer2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGACATCTCCGTGGCCAGCGATGCTGACTTCAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGGCCAGCGATGCTGACT.....2312.002011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCCGTGGCCAGCGAT............1811.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGGCCAGCGATGCTGACTT....2411.001010000
droMoj3
TTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCA-------AATCCTCCCAAATAGTTGCCGCCTTGGTGCCCGACATGTCCGTGGCCAGCGATGCTGAGT-----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGTGGCCAGCGATGCTGA.......2115.005410000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCGTGGCCAGCGATGCTGA.......2413.003200100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGGCCAGCGATGCTGA.......1912.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGTGGCCAGCGATGCT.........1911.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGACATGTCCGTGGCCAGCGATGCTG........2711.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCTTGGTGCCCGAC..............................1811.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGTGGCCAGCGATGCTGA.......2311.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGCCTTGGTGCCCGACAT............................2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCCTTGGTGCCCGACAT............................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGTGGCCAGCGAT............1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATGTCCGTGGCCAGCGATGCT.........2411.001000001
droGri2
ATATTTAAGGTTTTTCAAGGGT-ATTT--------------------------------------------CTA--------ACTGTAAA--------------------------------------------------------TAAAATATATAGTCGCTGATCTCGTTCCCGACATGTCTGTTGCTGCCGATGGTCAGGATGCAAGTAAGCACAATT---------------------AACTA-GTAAATGTATAAT---------------------------TCTC-TTAAAAGAATAT---------------------------------------------ATATTCTAATTGTAATCCACATCCAAAATATA--------------------------TAGTCAATGTCGATGCCGATCTGATTCCCGACATGTCCGTCGCCAGCGATGCCGAGT-AGGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................CTGTTGCTGCCGATGGTCAGGA..........................................................................................................................................................................................................................................................................2220.50110

Generated: 05/17/2015 at 11:14 PM