ID:

dya_772

 Coordinate:

3L:12011181-12011331 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.8 -4.8 -4.7

Flybase annnotation

CDS [Dyak\GE20156-cds]; exon [dyak_GLEANR_4003:2]; intron [Dyak\GE20156-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGTGTGACTATACCTGCGATAATACGATTGAGTTTACGGGTTCACACCAGGTGCAATAACCGCCAATTGACGAGGAAGTATTTTGTAATAACCAAAAATGTACATTAATACTTAGCAAAATAAAGAAAGAGCAATACAACGTAATTGGTTTTCACCAGACGGCAATACAATTGAATTCCTCTTAAAGATAGCGGACTTCGCGAAAAAGATCAGATAAGATGTGGAATGAGCTTCAATTGGGGTTATAAATA
*************************************************************..............(((((((.((((.............))))..)))))))...................*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V120
male body		 M043
female body
 M026
head
 V052
head
 V058
head
.............................................................GCCAATTGACGAGGAAGTATTTTGT..................................................................................................................................................................... 25 0 1 24.00 24 22 2 0 0 0
...GTGACTATACCTGCGATAATACGATT.............................................................................................................................................................................................................................. 26 0 1 24.00 24 2 22 0 0 0
...GTGACTATACCTGCGATAATACGATTGA............................................................................................................................................................................................................................ 28 0 1 21.00 21 2 19 0 0 0
............................................................CGCCAATTGACGAGGAAGTATTTTGT..................................................................................................................................................................... 26 0 1 20.00 20 17 3 0 0 0
...............................................................CAATTGACGAGGAAGTATTTTGT..................................................................................................................................................................... 23 0 1 12.00 12 8 4 0 0 0
.................GATAATACGATTGAGTTTACGGGT.................................................................................................................................................................................................................. 24 0 1 12.00 12 11 1 0 0 0
............................................................CGCCAATTGACGAGGAAGT............................................................................................................................................................................ 19 0 1 12.00 12 8 4 0 0 0
...GTGACTATACCTGCGATAATACGAT............................................................................................................................................................................................................................... 25 0 1 11.00 11 2 8 1 0 0
................................................................AATTGACGAGGAAGTATTTTGT..................................................................................................................................................................... 22 0 1 11.00 11 10 1 0 0 0
................................................................................................................TAGCAAAATAAAGAAAGAGC....................................................................................................................... 20 0 1 11.00 11 9 2 0 0 0
.................GATAATACGATTGAGTTTACGGGTT................................................................................................................................................................................................................. 25 0 1 10.00 10 6 2 2 0 0
...............................................................CAATTGACGAGGAAGTATTTT....................................................................................................................................................................... 21 0 1 9.00 9 8 1 0 0 0
......................................................AATAACCGCCAATTGACGAGGAAGT............................................................................................................................................................................ 25 0 1 9.00 9 7 2 0 0 0
...................................................................TGACGAGGAAGTATTTTGT..................................................................................................................................................................... 19 0 1 9.00 9 8 1 0 0 0
..............................................................................................................CTTAGCAAAATAAAGAAAGAGC....................................................................................................................... 22 0 1 9.00 9 8 1 0 0 0
.................................................................ATTGACGAGGAAGTATTTTGT..................................................................................................................................................................... 21 0 1 9.00 9 8 1 0 0 0
.....GACTATACCTGCGATAATACGATT.............................................................................................................................................................................................................................. 24 0 1 8.00 8 0 8 0 0 0
...GTGACTATACCTGCGATAATACGATTG............................................................................................................................................................................................................................. 27 0 1 8.00 8 0 8 0 0 0
...........................................................................................................ATACTTAGCAAAATAAAGAAAGAGC....................................................................................................................... 25 0 1 7.00 7 7 0 0 0 0
................................................................AATTGACGAGGAAGTATTTT....................................................................................................................................................................... 20 0 1 7.00 7 6 1 0 0 0
.............................................................................................................ACTTAGCAAAATAAAGAAAGAGC....................................................................................................................... 23 0 1 7.00 7 7 0 0 0 0
.............................................................GCCAATTGACGAGGAAGTATTTT....................................................................................................................................................................... 23 0 1 7.00 7 6 1 0 0 0
.....................ATACGATTGAGTTTACGGGT.................................................................................................................................................................................................................. 20 0 1 6.00 6 6 0 0 0 0
.........ATACCTGCGATAATACGATTG............................................................................................................................................................................................................................. 21 0 1 6.00 6 2 3 0 1 0
..............................AGTTTACGGGTTCACACCAGGT....................................................................................................................................................................................................... 22 0 1 6.00 6 4 2 0 0 0
............................TGAGTTTACGGGTTCACACCAGGT....................................................................................................................................................................................................... 24 0 1 6.00 6 3 3 0 0 0
.............................GAGTTTACGGGTTCACACCAGGT....................................................................................................................................................................................................... 23 0 1 6.00 6 4 2 0 0 0
...............................................................CAATTGACGAGGAAGTATTTTGTA.................................................................................................................................................................... 24 0 1 6.00 6 6 0 0 0 0
....................AATACGATTGAGTTTACGG.................................................................................................................................................................................................................... 19 0 1 5.00 5 3 2 0 0 0
.......CTATACCTGCGATAATACGATTGA............................................................................................................................................................................................................................ 24 0 1 5.00 5 1 4 0 0 0
.................................................................................................................AGCAAAATAAAGAAAGAGC....................................................................................................................... 19 0 1 5.00 5 4 1 0 0 0
.........................................................AACCGCCAATTGACGAGGAAGT............................................................................................................................................................................ 22 0 1 5.00 5 4 1 0 0 0
.....GACTATACCTGCGATAATACGATTG............................................................................................................................................................................................................................. 25 0 1 5.00 5 0 5 0 0 0
.....GACTATACCTGCGATAATACGAT............................................................................................................................................................................................................................... 23 0 1 5.00 5 0 5 0 0 0
.....GACTATACCTGCGATAATACGATTGAGT.......................................................................................................................................................................................................................... 28 0 1 5.00 5 2 3 0 0 0
.....GACTATACCTGCGATAATACG................................................................................................................................................................................................................................. 21 0 1 5.00 5 0 5 0 0 0
..............................................................................................................CTTAGCAAAATAAAGAAAGAGCA...................................................................................................................... 23 0 1 5.00 5 4 1 0 0 0
.......................................................ATAACCGCCAATTGACGAGGAAGT............................................................................................................................................................................ 24 0 1 5.00 5 5 0 0 0 0
...GTGACTATACCTGCGATAATACG................................................................................................................................................................................................................................. 23 0 1 5.00 5 0 5 0 0 0
...............................GTTTACGGGTTCACACCAGGTGCA.................................................................................................................................................................................................... 24 0 1 5.00 5 2 3 0 0 0
.........ATACCTGCGATAATACGATT.............................................................................................................................................................................................................................. 20 0 1 5.00 5 2 3 0 0 0
.........................................................AACCGCCAATTGACGAGGAAGTATTTTGT..................................................................................................................................................................... 29 0 1 5.00 5 5 0 0 0 0
...............................GTTTACGGGTTCACACCAGGTGC..................................................................................................................................................................................................... 23 0 1 4.00 4 0 4 0 0 0
...........................................................................................................ATACTTAGCAAAATAAAGAAAGAGCA...................................................................................................................... 26 0 1 4.00 4 4 0 0 0 0
.......................................................................................................ATTAATACTTAGCAAAATAAAGAAAGAGC....................................................................................................................... 29 0 1 4.00 4 4 0 0 0 0
.............................GAGTTTACGGGTTCACACCAGGTGC..................................................................................................................................................................................................... 25 0 1 4.00 4 0 4 0 0 0
......................................................................................AATAACCAAAAATGTACATT................................................................................................................................................. 20 0 1 4.00 4 0 4 0 0 0
..................ATAATACGATTGAGTTTACGGGT.................................................................................................................................................................................................................. 23 0 1 4.00 4 3 1 0 0 0
.....GACTATACCTGCGATAATACGATTGA............................................................................................................................................................................................................................ 26 0 1 4.00 4 0 4 0 0 0
....................AATACGATTGAGTTTACGGGTT................................................................................................................................................................................................................. 22 0 1 4.00 4 4 0 0 0 0
............................................................CGCCAATTGACGAGGAAGTATTTTGTA.................................................................................................................................................................... 27 0 1 4.00 4 4 0 0 0 0
.........ATACCTGCGATAATACGATTGA............................................................................................................................................................................................................................ 22 0 1 4.00 4 0 4 0 0 0
...............................................................................................................TTAGCAAAATAAAGAAAGAGCA...................................................................................................................... 22 0 1 4.00 4 4 0 0 0 0
...............................GTTTACGGGTTCACACCAGGT....................................................................................................................................................................................................... 21 0 1 4.00 4 3 1 0 0 0
......................................................................................AATAACCAAAAATGTACATTAAT.............................................................................................................................................. 23 0 1 3.00 3 0 3 0 0 0
.................................................................ATTGACGAGGAAGTATTTTGTA.................................................................................................................................................................... 22 0 1 3.00 3 3 0 0 0 0
.............................................................GCCAATTGACGAGGAAGTAT.......................................................................................................................................................................... 20 0 1 3.00 3 2 0 1 0 0
.................GATAATACGATTGAGTTTACGG.................................................................................................................................................................................................................... 22 0 1 3.00 3 2 1 0 0 0
CGTGTGACTATACCTGCGATA...................................................................................................................................................................................................................................... 21 0 1 3.00 3 0 3 0 0 0
.................GATAATACGATTGAGTTTAC...................................................................................................................................................................................................................... 20 0 1 3.00 3 3 0 0 0 0
...GTGACTATACCTGCGATAATA................................................................................................................................................................................................................................... 21 0 1 3.00 3 0 3 0 0 0
................................................................AATTGACGAGGAAGTATTTTGTA.................................................................................................................................................................... 23 0 1 3.00 3 1 2 0 0 0
.................................................................ATTGACGAGGAAGTATTTT....................................................................................................................................................................... 19 0 1 3.00 3 2 1 0 0 0
.............................................................GCCAATTGACGAGGAAGTATTTTGTA.................................................................................................................................................................... 26 0 1 3.00 3 2 1 0 0 0
.........................................................................................AACCAAAAATGTACATTAAT.............................................................................................................................................. 20 0 1 3.00 3 0 3 0 0 0
CGTGTGACTATACCTGCGAT....................................................................................................................................................................................................................................... 20 0 1 3.00 3 1 2 0 0 0
..................ATAATACGATTGAGTTTACGG.................................................................................................................................................................................................................... 21 0 1 3.00 3 2 1 0 0 0
............................................................................................................TACTTAGCAAAATAAAGAAAGAGC....................................................................................................................... 24 0 1 3.00 3 2 1 0 0 0
..............................................................................................................CTTAGCAAAATAAAGAAAGAG........................................................................................................................ 21 0 1 3.00 3 3 0 0 0 0
....................................................GCAATAACCGCCAATTGACGAGGAAGT............................................................................................................................................................................ 27 0 1 3.00 3 1 2 0 0 0
...GTGACTATACCTGCGATAATAC.................................................................................................................................................................................................................................. 22 0 1 3.00 3 1 2 0 0 0
..................ATAATACGATTGAGTTTACGGGTTC................................................................................................................................................................................................................ 25 0 1 3.00 3 1 2 0 0 0
CGTGTGACTATACCTGCGATAATACG................................................................................................................................................................................................................................. 26 0 1 3.00 3 1 2 0 0 0
.......................................................................................................................ATAAAGAAAGAGCAATACAAC............................................................................................................... 21 0 1 2.00 2 1 1 0 0 0
.........................................................AACCGCCAATTGACGAGGAAGTATTTT....................................................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0
..............TGCGATAATACGATTGAGTTTACGG.................................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
.........................................TCACACCAGGTGCAATAACCGCC........................................................................................................................................................................................... 23 0 1 2.00 2 0 2 0 0 0
....................................................................................GTAATAACCAAAAATGTACATTAATA............................................................................................................................................. 26 0 1 2.00 2 0 2 0 0 0
.............................................................................................................ACTTAGCAAAATAAAGAAAGAGCAA..................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
.......................................GTTCACACCAGGTGCAATAACCGCC........................................................................................................................................................................................... 25 0 1 2.00 2 0 2 0 0 0
..................ATAATACGATTGAGTTTACGGGTT................................................................................................................................................................................................................. 24 0 1 2.00 2 1 1 0 0 0
................................................................................................................TAGCAAAATAAAGAAAGAGCA...................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0
.......................................................................................................................ATAAAGAAAGAGCAATACAACGTAAAAA........................................................................................................ 28 3 1 2.00 2 2 0 0 0 0
.....GACTATACCTGCGATAATACGATTGAGTT......................................................................................................................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0
.............................GAGTTTACGGGTTCACACCA.......................................................................................................................................................................................................... 20 0 1 2.00 2 0 2 0 0 0
............................................................CGCCAATTGACGAGGAAGTATTTT....................................................................................................................................................................... 24 0 1 2.00 2 1 1 0 0 0
..................................................................TTGACGAGGAAGTATTTTGT..................................................................................................................................................................... 20 0 1 2.00 2 1 1 0 0 0
.............................................................GCCAATTGACGAGGAAGTATTTTGTAA................................................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0
.......................................................................................................................ATAAAGAAAGAGCAATACAACGT............................................................................................................. 23 0 1 2.00 2 1 1 0 0 0
...........................................................CCGCCAATTGACGAGGAAGT............................................................................................................................................................................ 20 0 1 2.00 2 2 0 0 0 0
.......CTATACCTGCGATAATACGA................................................................................................................................................................................................................................ 20 0 1 2.00 2 0 2 0 0 0
....................AATACGATTGAGTTTACGGGTTCAC.............................................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0
......................................................................................AATAACCAAAAATGTACATTAATA............................................................................................................................................. 24 0 1 2.00 2 0 2 0 0 0
.......................................................................................................................ATAAAGAAAGAGCAATACA................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0
.......................ACGATTGAGTTTACGGGTTCAC.............................................................................................................................................................................................................. 22 0 1 2.00 2 2 0 0 0 0
......................TACGATTGAGTTTACGGGTT................................................................................................................................................................................................................. 20 0 1 2.00 2 1 1 0 0 0
.GTGTGACTATACCTGCGAT....................................................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0
.......CTATACCTGCGATAATACGATTG............................................................................................................................................................................................................................. 23 0 1 2.00 2 1 1 0 0 0
....TGACTATACCTGCGATAATAC.................................................................................................................................................................................................................................. 21 0 1 2.00 2 0 2 0 0 0
...GTGACTATACCTGCGATAATACGA................................................................................................................................................................................................................................ 24 0 1 2.00 2 0 2 0 0 0
..............................AGTTTACGGGTTCACACCAGGTGCA.................................................................................................................................................................................................... 25 0 1 2.00 2 0 2 0 0 0
..........................................................................................................................AAGAAAGAGCAATACAACGT............................................................................................................. 20 0 1 2.00 2 2 0 0 0 0
.......CTATACCTGCGATAATACGATT.............................................................................................................................................................................................................................. 22 0 1 2.00 2 0 2 0 0 0
.....................ATACGATTGAGTTTACGGGTTCACACCA.......................................................................................................................................................................................................... 28 0 1 2.00 2 1 1 0 0 0
...........ACCTGCGATAATACGATTGAGTT......................................................................................................................................................................................................................... 23 0 1 2.00 2 1 1 0 0 0
.............................................................................................................ACTTAGCAAAATAAAGAAAGA......................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0
......................................................................................................................AATAAAGAAAGAGCAATACAAAA.............................................................................................................. 23 2 1 2.00 2 2 0 0 0 0
.................................................................................................................AGCAAAATAAAGAAAGAGCA...................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0
...........................TTGAGTTTACGGGTTCACACCAGGT....................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
.....................ATACGATTGAGTTTACGGGTT................................................................................................................................................................................................................. 21 0 1 2.00 2 1 1 0 0 0
............................................................CGCCAATTGACGAGGAAGTAT.......................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0
.................GATAATACGATTGAGTTTACGGGTTC................................................................................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0
.......................................................................................ATAACCAAAAATGTACATTA................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
....................................................................GACGAGGAAGTATTTTGT..................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
........................................................................................................................TAAAGAAAGAGCAATACAACG.............................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
...................................................TGCAATAACCGCCAATTGACGAGGAAGTAT.......................................................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0
.................................................................................................ATGTACATTAATACTTAGCAA..................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.......................ACGATTGAGTTTACGGGTTCA............................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.............................................................CCCAATTGACGAGGAAGTATTTTGT..................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.................................TTACGGGTTCACACCAGGTGCAA................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
.......................................................ATAACCGCAAATTGACGAGGAAGTATT......................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0
..............TGCGATAATACGATTGAGTTTACGGGT.................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................AAAGAAAGAGCAATACAACGTAAATG........................................................................................................ 26 1 1 1.00 1 0 1 0 0 0
....................................................................................GTAATAACCAAAAATGTACATT................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0
........TATACCTGCGATAATACGATT.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
............................................................CGCCAATTGACGAGGAAGTATT......................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
.................................................................................................................AGCAAAATAAAGAAAGAGCAATACAACGT............................................................................................................. 29 0 1 1.00 1 1 0 0 0 0
.............................................ACCAGGTGCAATAACCGCCAAT........................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
...........................................ACACCAGGTGCAATAACCGC............................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
..............................................CCAGGTGCAATAACCGCCAATTGACGA.................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
..........................ATTGAGTTTACGGTTTCACACCAGGT....................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 1
.........ATACCTGCGATAATACGATTGAGTTTAC...................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
............................TGAGTTTACGGGTTCACACCAGGTGCAAT.................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0
.......................ACGATTGAGTTTACGGGTTCACACCAGGT....................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
.............................................................................................................ACTTAGCAAAATAAAGAAAGAGCAATACA................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0
.............................................................GCCAATTGACGGGGAAGTATTTTGT..................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.....................ATACGATTGAGTTTACGGGTTCACA............................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
...............................................................CAATTGACGAGGAAGTATTTTGTAATA................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
........TATACCTGCGATAATACGATTGAGTTTAC...................................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
......ACTATACCAGCGATAATACG................................................................................................................................................................................................................................. 20 1 1 1.00 1 0 1 0 0 0
................................................................AATTGACGAGGAAGTATTTTGTAATA................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
..........................ATTGAGTTTACGGGTTCACACCAGGT....................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
........................................................................................................................TAAAGAAAGAGCAATACAAA............................................................................................................... 20 1 1 1.00 1 0 1 0 0 0
.......CTATACCTGCGATAATACGATTGAGTTTAC...................................................................................................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0
..........................ATTGAGTTTACGGGTTCACA............................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0
...........ACCTGCGATAATACGATTGA............................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
........................................................................................................TTAATACTTAGCAAAATAAAGAAAG.......................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.....GACTATACCTGCGATAATACGGTT.............................................................................................................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0
............................................................................................................................GAAAGAGCAATACAACGTAATTG........................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
....................................................GCAATAACCGCCAATTGACGAGGA............................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
................................................................AATTGACGAGGAAGTATTTTGTAA................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................AATTGGTTTTCACCAGACGGC........................................................................................ 21 0 1 1.00 1 1 0 0 0 0
.......................................................ATAACCGCCAATTGACGAGG................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
.................................................................................................................AGCAAAATAAAGAAAGAGCAATACAA................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0
.........ATACCTGCGATAATACGAT............................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
............................TGAGTTTACGGGTTCACACCAGGTGC..................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
.............CTGCGATAATACGATTGAGTTTACGG.................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
...............................................................CAATTGACGAGGAAGTATTTTGC..................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
................................TTTACGGGTTCACACCAGGTGCAATAAC............................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
.......CTATACCTGCGATAATACGAT............................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
......................................................................CGAGGAAGTATTTTGTAATAAC............................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.................................................................ATTGACGAGGAAGAATTTTGT..................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
....................................................................................GTAATAACCAAAAATGTACATTAATACT........................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
...............................GTTTACGGGTTCACACCATGT....................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................AATTGGTTTTCACCAGACGGCA....................................................................................... 22 0 1 1.00 1 0 1 0 0 0
.......................................................................................................ATTAATACTTAGCAAAATAAAGAAAGA......................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.....GACTATACCTGCGATAATACGATTGAGTTT........................................................................................................................................................................................................................ 30 0 1 1.00 1 1 0 0 0 0
.........ATACCTGCGATAATACGATTGAGTT......................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.....GACTATACCTGCGATAATAC.................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................ATAAAGAAAGAGCAATACAACGTAAAA......................................................................................................... 27 2 1 1.00 1 1 0 0 0 0
..........................................................ACCGCCAATTGACGAGGAAGT............................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0
.................................TTACGGGTTCACACCAGGTGCA.................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
......................................................................................................................AATAAAGAAAGAGCAATACAA................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
.......CTATACCTGCGATAATACGATTGAGTTT........................................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0
....................................................GCAATAACCGCCAATTGACGAGGAAGTAT.......................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
.................GATAATACGATTGAGTTTACG..................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...............................................................................................................TTAGCAAAATAAAGAAAGA......................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
..AGTGACTATACCTGCGATAATACGATT.............................................................................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0
..............................................................................................................CTTAGCGAAATAAAGAAAGAGCA...................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
.............................GAGTTTACGGGTTCACACCAGGTG...................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
..............................................................................................................CTTAGCAAAATAAAGAAAGAGCAAT.................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
..............................................................................................................CTTAGCAAAATAAAGAAAG.......................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0
....................................................................................................................AAAATAAAGAAAGAGCAATACAAAA.............................................................................................................. 25 2 1 1.00 1 1 0 0 0 0
......................................................................................................CATTAATACTTAGCAAAATAAAGAAAG.......................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
............................TGAGTTTACGGGTTCACACCAGGTG...................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
...........................................................CCGCCAATTGACGAGGAAGTATTTTGTA.................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................AAATAAAGAAAGAGCAATACAACG.............................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
......................................................AATAACCGCCAATTGACGAGGAAG............................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.....................ATACGATTGAGTTTACGGGTTCAC.............................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0
......................................................AATAACCGCCAATTGACGAGGGAGTAT.......................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
..................ATAATACGATTGAGTTTACG..................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
......................................................AATAACCACCAATTGACGAGGAAGTA........................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
..........................................CACACCAGGTGCAATAACC.............................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0
............................TGAGTTTACGGGTTCACA............................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0
..............................AGTTTACGGGTTCACACCAGG........................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0
.........ATACCTGCCATAATACGATT.............................................................................................................................................................................................................................. 20 1 1 1.00 1 0 1 0 0 0
.........................GATTGAGTTTACGGGTTCAC.............................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0
..................................................................TTGACGAGGAAGTATTTTGTAATAACCAAA........................................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0
..................ATAATACGATTGAGTTTACGGGTTCAC.............................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
............................................CACCAGGTGCAATAACCGCCAATTGACGA.................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0
......................................................AATAACCGCCAATTGACGAGGCAGT............................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0
............................................................................................................................GAAAGAGCAATACAACGTAAA.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
...............................................................CAATTGACGAGGAAGTATTT........................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
...............................................................CAATTGACGAGGAAGGATTTT....................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................GGTTTTCACCAGACGGCAAA..................................................................................... 20 1 1 1.00 1 0 1 0 0 0
...............................................................................................................TTAGCAAAATAAAGAAAGAGCAAT.................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
.......................................................ATAACCGCCAATTGACGAGGAAGTATTTT....................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
........................................................TAACCGCCAATTGACGAGGAAG............................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
.GTGTGACTATACCTGCGATA...................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................AAGAGCAATACAACGTAATTG........................................................................................................ 21 0 1 1.00 1 0 1 0 0 0
.................................................................ATTGACGAGGAAGTACTTTGT..................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
..............................................................................................................CTTAGCAAAATAAAGAAAGAGCAATAC.................................................................................................................. 27 0 1 1.00 1 0 0 0 1 0
..................................................GTGCAATAACCGCCAATTGACGAGGAAGG............................................................................................................................................................................ 29 1 1 1.00 1 1 0 0 0 0
.............................................................GCCAATTGACGAGGAAGT............................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0
.............................................................................................................ACTTAGCAAAATAAAGAAAG.......................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...............................................................CAATTGACGAGGAAGTATTTTGTAAT.................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
...................................................................TGACGAGGAAGTATTTTGTAAT.................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
.............................................ACCAGGTGCAATAACCGCC........................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
.......................................................................................ATAACCAAAAATGTACATTAATACTT.......................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
............................................................................................................TACTTAGCAAAATAAAGAAA........................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
....................................................................................................................AAAATAAAGAAAGAGCAATACAA................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
.............................................................................................................ACTTAGCAAAATAAAGAAAGAG........................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
.....GACTATACCTGCGATAATACGA................................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
..................GTAATACGATTGAGTTTAC...................................................................................................................................................................................................................... 19 1 1 1.00 1 0 1 0 0 0
....TGACTATACCTGCGATAATACGATT.............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
................CGATAATACGATTGAGTTTACGGGTTCA............................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
.................................................GGTGCAATAACCGCCAATTGACGAGGAAGT............................................................................................................................................................................ 30 0 1 1.00 1 1 0 0 0 0
..........................ATTGAGTTTACGGGTTCACACCAGGTG...................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
............................TGAGTTTACGGGTTCACACCAGGTGCA.................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..........................................................................................ACCAAAAATGTACATTAA............................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
..................................................................................................................GCAAAATAAAGAAAGAGCA...................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
...........ACCTGCGATAATACGATTG............................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
.......CTATACCTGCGATAATACGATTGAGT.......................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
...................................................................TGACGAGGAAGTATTTTGTAATAACC.............................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
............................................................CGTCAATTGACGAGGAAGG............................................................................................................................................................................ 19 2 1 1.00 1 0 0 0 0 1
.......................................ATTCACACCAGGTGCAATAACCGCC........................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
...........................................................CCGCCAATTGACGAGGAAGTATTTTGT..................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
.............................GAGTTTACGGGTTCACACCAGGTGCA.................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
....TGACTATAGCTGCGATAATACGAT............................................................................................................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0
...................................................................................................................................................................................................................AGATAAGATGTGGAATGAGC.................... 20 0 1 1.00 1 1 0 0 0 0
......................................................................................AATAACCAAAAATGTACATTAATAC............................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0
.............CTGCGATAATACGATTGAGT.......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..............................................................CCAATTGACGAGGAAGTAT.......................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
......................................................................................................CATTAATACTTAGCAAAATAAAG.............................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0
............CCTGCGATAATACGATTGAGTTTACG..................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................TACAACGTAATTGGTTTTCACCAG............................................................................................. 24 0 1 1.00 1 0 1 0 0 0
.......CTATACCTGCGATAATACG................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0
...................................................................................................GTACATTAATACTTAGCAAA.................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
...GTGACTATTCCTGCGATAATACGATT.............................................................................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0
..............................................................................................................CTTAGCAAGATAAAGAAAGAGC....................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0
................................................................................................AATGTACATTAATACTTAGCA...................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1
.....................................................CAATAACCGCCAATTGACGAGGAAGT............................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
...................................................TGCAATAACCGCCAATTGACGA.................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0
............................................................................................................................................GTAATTGGTTTTCACCAGACG.......................................................................................... 21 0 1 1.00 1 0 1 0 0 0
...........................................ACACCAGGAGCAATAACCGCCA.......................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0
..........TACCTGCGATAATACGATT.............................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0
...GTGACTATACCTGCGATAATACGGTTG............................................................................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0
.GTGTGACTATACCTGCGATAATACGAT............................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................AAAGAAAGAGCAATACAACG.............................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
..............................................................................................................CTTAGCAAAATAAAGAAAGA......................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.......................................GTTCACACCAGGTGCAATAACC.............................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0
......................................................................................................CATTAATACTTAGCAAAATAAAGAAAGAGC....................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0
......................................................AATAACCGCCAATTGACGAGGAAGCATTT........................................................................................................................................................................ 29 1 1 1.00 1 1 0 0 0 0
........................................TTCACACCAGGTGCAATAACCGCCAAT........................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0
............................................................CGCCAATTGACGAGGAAGTATTT........................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
.................................TTACGGGTTCACACCAGGT....................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
...........................................ACACCAGGTGCAATAACCGCCAATTGA..................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
.................GATAATACGATTGAGTTTACGGGTTCAC.............................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
.................................................................ATTGACGAGGAAGGATTTTGT..................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.................................................................................................................AGCACAATAAAGAAAGAGCAATACA................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
............................................................................................................TACTTAGCAAAATAAAGAAAG.......................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.........................................................................................AACCAAAAATGTACATTAATAC............................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
..................................................GTGCAATAACCGCCAATTGACGAGGAAGT............................................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................AAATAAAGAAAGAGCAATACAAC............................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
....................................CGGGTTCACACCAGGTGCAATAACCGCC........................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
...................................................................................................................CAAAATAAAGAAAGAGCAATACA................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
............CCTGCGATAATACGATTGAGTTTAC...................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
............................................................................................................TACTTAGCAAAATAAAGAAAGAG........................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
......................................................AATAACCGCCAATTGACGAGGAAGTAT.......................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
........................................................TAACCGCCAATTGACGAGGAAGT............................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
..........TACCTGCGATAATACGATTGAG........................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.......................................................................GAGGAAGTATTTTGTAATAAC............................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
................................................................AATTGACGAGGAAGTATTT........................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
....................................................................................................................AAAATAAAGAAAGAGCAAT.................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
........................................................TAACCGCCAATTGACGAGGA............................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...............................................................................................................TTAGCAAAATAAAGAAAGAGCAATACAAC............................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
.................................................................................................ATGTACATGAATACTTAGCAA..................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0
..........................................................................................................AATACTTAGCAAAATAAAGAAAGAGCA...................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
....................AATACGATTGAGTTTACGGG................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
....................AATACGATTGAGTTTACGGGTTC................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
...............................................................................................................TTAGCAAAATAAAGAAAGAGC....................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................ACTTAGCAAAATAAAGAAAGAGCA...................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.............CTGCGATAATACGATTGAGTT......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................AAAGAGCAATACAACGTAATTGGTT..................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................AAAGAGCAATACAACGTAATTG........................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................AAATAAAGAAAGAGCAATACAACGTAATTG........................................................................................................ 30 0 1 1.00 1 1 0 0 0 0
...GTGACTATCCCTGCGATAATACGATTGA............................................................................................................................................................................................................................ 28 1 1 1.00 1 0 1 0 0 0
...........................................................................................................ATACTTAGCAAAATAAAGAAAGAGCAATA................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
CGTGTGACTATACCTGCGATAATACGAT............................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
....................................................................................................................AAAATAAAGAAAGAGCAATACAACGT............................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
......................................................................................................CATTAATACTTAGCAAAA................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0

Anti-sense strand reads

GCACACTGATATGGACGCTATTATGCTAACTCAAATGCCCAAGTGTGGTCCACGTTATTGGCGGTTAACTGCTCCTTCATAAAACATTATTGGTTTTTACATGTAATTATGAATCGTTTTATTTCTTTCTCGTTATGTTGCATTAACCAAAAGTGGTCTGCCGTTATGTTAACTTAAGGAGAATTTCTATCGCCTGAAGCGCTTTTTCTAGTCTATTCTACACCTTACTCGAAGTTAACCCCAATATTTAT
***********************************************************************************************************************..............(((((((.((((.............))))..)))))))...................************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M056
embryo
 V120
male body		 M026
head
 M043
female body
.................................................CCACGTTATTGGCGGTTAACTGCTCCT............................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................................................TCGAAGTCAACCCCAATTTT... 20 2 1 1.00 1 0 1 0 0
....................................................................CAGCTCCTTCATAAAACG..................................................................................................................................................................... 18 2 5 0.40 2 0 0 2 0
........................................................................TCCTTCATAAAACGTGATAG............................................................................................................................................................... 20 3 15 0.07 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3L:12011131-12011381 - dya_772 CGTGTGACTATACCTGCGATAATACGATTGAGTTTACGG-GTTCACACC--AGGTGCAATAACCGCCA-ATTGACGAGGAAGTATTTTGTAAT-AA-CC-A---AAAATGTACATTAA-TACTTAGCAAAATAAAGAAAGA-GCAATACAACGTAATTGGTTTTCACCAGA---CGGCAATACAATTGAATTCCTCTTAAAGATAGCGGACTTCGCG-AAAAAGA--TCAGATAAGATGTGGAATGAGCTTCAA-TTGGGG----TTATAAATA-
droEre2 scaffold_4784:11952697-11952936 - CGTGTGACTATACCTGCGATAATACGATTGAGTTCTCGG-GTGCTCACC--AGGTGCAATAACCGCAT-ATTGACGAGGAAGTATTTTGTAAC-AC-CC-G---AAAATGTACATTA---AATAA--------AAGAAATA-GCAGTACAACGTAATTGTTTTTCACCAGA---CGGCAATACAATTGAATTGCTCTTAAAGATAGCGGACTTCGCG-AAAAAGA--TCAGATAAGATGTGGAATG-GCTTTAA-TTGCTG----TTATAAATA-
droSec2 scaffold_0:4152273-4152523 - dse_424 CGTGTGACTATACCTGCGATAATGCGATTGAGTTCTCTG-GTGCACACC--AGGTGCAATAACCGTCAATTTGACGAGGTAGTATTTTGTAAC-AC-CC-A---AAAATGTACATTAA-TACTAATCAAAATAAAGAAATA-GCAATACAACGTAATTGTTTTTCACCAGA---CGGCA-TACAATTGAGTTCCTCTTAAAGATAACGGACTTCGCG-AAAAAGA--TCAGATAAGATGGTGAATGAGCTTCGA-TTGGTG----TTATAAATA-
droSim2 3l:11665431-11665681 - CGTGTGACTATACCTGCGATAATGCGATTGAGTTGTCTG-GTGCACACC--AGGTGCAATAACCGCCAACTTGACGAGGTAGTATTTTGTAAC-AC-CC-A---AAAATGTACATTAA-TACTAATCAAAATAAAGAAATA-GCAATACAACGTAATTGTTTTTCACCAGA---CGGCA-TACAATTGAGTTCCTCTTAAAGATAACGGACTTCGCG-AAAAAGA--TCAGATAAGATGGTGAATGAGCTTCGA-TTGGGG----TTATAAATA-
dm3 chr3L:11966079-11966321 - CGTGTGACTATACCTGCGATAATGCGATTGAGTTCTCTG-GCGCACACC--AAGTGCAATAACCGCAA-ATTTAAGAGGTAGTATTTTGTAAC-AC-CC-A---AAAATGTACATTAA-TACCAAGCAAAATAAAGAAATA-GCAATACAACGTAATTGGTTTTCATCAGA-----------CAATTGAGTTCCTATTAAAGATAACGGACTTCGCG-AAAAAGA--TCAGATAAGATGGTGAATGAGCTTCGA-TTGGGT----TTATAAATA-
droEug1 scf7180000409466:4054493-4054744 - CTTGTGACTATACCTGCGACAATGAAGTCAAGTTCTCCG-ATGTCTTCC--AGGTGCAATAACCGCCA-ATATATACTCTAGTATTTTGTAAC-AC-CC-ACAATAAATGAACATTCA-TACTAA--AAAATGAAAAAATA-ACAATTCAGCGTAATTGGTTTTTAGCAGA---CGGCAATTCAATTGAGTTCCTCTTAAAGATAACGGGCTTCGCA-AAAAAGA--TCAGATAAGATGGCGAATGAGCTTCAA-TTGGGG----TTATAAATA-
droBia1 scf7180000302428:4206878-4207129 - CGTGTGACTATACCTGCGACAATGCAGTCGAGTTCTCCA-ATGACTTCC--AGGTGCAATAACCGCCA-GTAAGAGAGGTAGTATTTTGTAAC-ACACC-C---GAATTGTACATAAA-TACTAATCGAAATAAAGGAATA-CCAATTCAACGTAATTGGTTTTTAGCAGA---CTGCGGTTCAATTGAGTTCCTCTTAAAGATAACGTACTTCGCA-AAAAAGA--CCAGATAAGACGACGAATGAGCTTCTA-TTGGGG----TTATAAATA-
droTak1 scf7180000415741:139818-140069 + CGTGTGACTATACCTGCGACAATGCAGTCGAGTTCTCTA-ATGATTTTC--AGGTGCAATAACCGGCA-ATAAAT-AGGTAGTATTTTGTAAC-ACACC-A---AAAATGTACACATG-TACTAAGCAAAATAAAGGAAAA-GCAATTCAACGTAATTAATTTTCAGTAGA---CGGCAGTTCAAATGAGTTCCTCTTAAAGATAACGGGCTTCGCAAAAAAAGA--TGCGATAAGACGGCGAATAAGCTTCAA-ATGGGG----TTATAAATA-
droEle1 scf7180000491193:3876203-3876456 - CGTGTGACTATACTTGCGACAATGAAGTAAAATTCTCTG-ACGACTACG--AGGTGCAATAACCGCTA-TTAAATGAAGTAGAATTTTGTAAGCAC-AC-GA-AAAAATGTACATACA-TAATAAACAAAATAAAGAAA-A-ACAATTGAACGTAATTGGTTTTCAGTAGA---CGGCTGCTCAATTGAGTTCCTCTTAAAGATAACGGGCTTCGCA-AAAAAAATACCAGATAAG-TGGGGAATGAGCTTTCA-TTG-GG----TTATAAATAT
droRho1 scf7180000780179:3272-3399 + CGTGTGACTATACTTGCGACAATGGAATCGAACTCTCTG-ATGACTACT--AGGTGCAATAACCGCCA-TTAAATGAGGTAGTATTTCGTTAC-AC-AC-G---AAAATGTATACACA-TAATAAACAAAATAAAGGAA----------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454113:2685395-2685650 + CGTGTGATTATACTTGCGACAATGGACTCGCGTTTTCTG-ATGTCTAGC--AAGTGCAATAACCGCTA-GCAATTGGTGTATCATTTTGTAAT-AA-CCCAC-AAAAATGTACGTACT-TAGGAAGCAAAATAAAGAAATAAACAATTCAACGTAATTGATTTTAAGCAGA---CTGGTGTTCAATTGAGTTCCTCTTAAAGATAACACGCTTCGCG-AAAATTA--CGAGATAAGATGGTGAATGAGCCATACAATGGGG----TTATAAATA-
droKik1 scf7180000302391:858674-858926 + CATGCGACTTTACCTGCGACAATACAGTCGAACTCGCAG-CAGTCTAGC--AGGTGCAATGAACGGACAATAAATTAGGAAGAATTTTGTAAC-AC-AC-AAAAAAAATGTA-ATCAG-AAATAAACGCAGTAAAACAAAA-GCAATCCAAAGTAATTGGCTTTCAGCAGA---CGGCAGCTCAATTGAGTTCCTCTTCAAGATAACGAGCTTCGCG-AAAAAGA--TCCGATAAGATGG-GAATGAGCTCCAG-TAAGGG----TTATAAATA-
droAna3 scaffold_13337:6215902-6216154 - GCTGTGACTACACCTGTGACAGCAGTGTCTAGACTCTACTCTGTCGTAAAAGGGTGCAATGTACGCCTTATTT---AGGAAGCAATTT-TAAC-AA-CA-A---AAAA-A-AAATTAAAAAATAAACGCAATATTGCAACA-CAAAATATACGCAATTCCTTTTCAGTAGAATTCACCAGTTCAATTATATTCCCCTTGAAGATAACGAGCTTTCCA-ATGGAGA--TCCGATAACAAGCCGAAGTAGCTCCCA-TTCAGG----TTATAAAAG-
droBip1 scf7180000396419:154675-154923 - GCTGTGACTACACCTGTGACAGCAGTATCTAGTGTCTAGACAGTCGAAA--AGGTGCAATGAACGCCTAATAT---AGGAAGCAATTT-TAAG-AA-AT-A---AAAA--TACTTTAATAAATAAGC--AATATTGCAACA-CAAAATCTACGCAATTCGTATTCAGTAGAATCCAGCAGTTCAATTGACTTCCCATTGAAGATAACAAGCCTTCCA-ATGGAGA--TCCGATAACAAGCCAAAGTAGCCCCCA-TTCAGG----TTATAAAAG-
dp5 XR_group6:1963817-1964055 - GCTGTGACTACACATGCGACTCCCGCTTTGCGTACCCTG-AAGACAATC--AGGAGCAATGAACGTTT---------------ATGTCGTAAC-AA-AC-G---AAAATGCG--TTCC-CAATAAATGCAATAATACAAAA-TACA-TTTAAGCAATTAAATTTTTGTAGC---CGACAACTCAAGAGGTTTCCCCTTATAGATAACGGGTTTCACACAAAAAGA--TCTGATAAGAAGTGCAATGAGCTACCT-ATAGCTTTACTTATAAATA-
droPer2 scaffold_9:253500-253626 - AAT---------------------------------------------------------------------------------------------------------------------------------------------AATACAAAACAATTATATTTTTGTAGC---CGACAACTCAAGAGGTTTCCCCTTATAGATAACGGGTTTCACACAAAAAGA--TCTGATAAGAAGTGCAATGAGCTACCT-ATAGCGTTACTTATAAATA-
droWil2 scf2_1100000004511:3278627-3278650 + ATTGTGATTATGTATGCGATTATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:21080768-21080786 + GATGCGACTACGAATGCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:15452626-15452644 + GATGTGACTATGAATGTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CGTGTGACTATACCTGCGATAATACGATTGAGTTTACGG-GTTCACACC--AGGTGCAATAACCGCCA-ATTGACGAGGAAGTATTTTGTAAT-AA-CC-A---AAAATGTACATTAA-TACTTAGCAAAATAAAGAAAGA-GCAATACAACGTAATTGGTTTTCACCAGA---CGGCAATACAATTGAATTCCTCTTAAAGATAGCGGACTTCGCG-AAAAAGA--TCAGATAAGATGTGGAATGAGCTTCAA-TTGGGG----TTATAAATA-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................GCCA-ATTGACGAGGAAGTATTTTGT.........................................................................................................................................................................................25124.0024020000220000
...GTGACTATACCTGCGATAATACGATT......................................................................................................................................................................................................................................................26124.0024022000020000
...GTGACTATACCTGCGATAATACGATTGA....................................................................................................................................................................................................................................................28121.0021019000020000
...............................................................CGCCA-ATTGACGAGGAAGTATTTTGT.........................................................................................................................................................................................26120.0020030000170000
..................................................................CA-ATTGACGAGGAAGTATTTTGT.........................................................................................................................................................................................23112.001204000080000
.................GATAATACGATTGAGTTTACGG-GT.........................................................................................................................................................................................................................................24112.0012010000110000
...............................................................CGCCA-ATTGACGAGGAAGT................................................................................................................................................................................................19112.001204000080000
...GTGACTATACCTGCGATAATACGAT.......................................................................................................................................................................................................................................................25111.001118000020000
...................................................................A-ATTGACGAGGAAGTATTTTGT.........................................................................................................................................................................................22111.0011010000100000
...........................................................................................................................TAGCAAAATAAAGAAAGA-GC...................................................................................................................................20111.001102000090000
.................GATAATACGATTGAGTTTACGG-GTT........................................................................................................................................................................................................................................25110.001022000060000
..................................................................CA-ATTGACGAGGAAGTATTTT...........................................................................................................................................................................................2119.00901000080000
.........................................................AATAACCGCCA-ATTGACGAGGAAGT................................................................................................................................................................................................2519.00902000070000
.......................................................................TGACGAGGAAGTATTTTGT.........................................................................................................................................................................................1919.00901000080000
.........................................................................................................................CTTAGCAAAATAAAGAAAGA-GC...................................................................................................................................2219.00901000080000
.....................................................................ATTGACGAGGAAGTATTTTGT.........................................................................................................................................................................................2119.00901000080000
.....GACTATACCTGCGATAATACGATT......................................................................................................................................................................................................................................................2418.00808000000000
...GTGACTATACCTGCGATAATACGATTG.....................................................................................................................................................................................................................................................2718.00808000000000
.....................................................................................................................A-TACTTAGCAAAATAAAGAAAGA-GC...................................................................................................................................2517.00700000070000
...................................................................A-ATTGACGAGGAAGTATTTT...........................................................................................................................................................................................2017.00701000060000
........................................................................................................................ACTTAGCAAAATAAAGAAAGA-GC...................................................................................................................................2317.00700000070000
................................................................GCCA-ATTGACGAGGAAGTATTTT...........................................................................................................................................................................................2317.00701000060000
.....................ATACGATTGAGTTTACGG-GT.........................................................................................................................................................................................................................................2016.00600000060000
.........ATACCTGCGATAATACGATTG.....................................................................................................................................................................................................................................................2116.00603001020000
..............................AGTTTACGG-GTTCACACC--AGGT............................................................................................................................................................................................................................2216.00602000040000
............................TGAGTTTACGG-GTTCACACC--AGGT............................................................................................................................................................................................................................2416.00603000030000
.............................GAGTTTACGG-GTTCACACC--AGGT............................................................................................................................................................................................................................2316.00602000040000
..................................................................CA-ATTGACGAGGAAGTATTTTGTA........................................................................................................................................................................................2416.00600000060000
....................AATACGATTGAGTTTACGG-...........................................................................................................................................................................................................................................1915.00502000030000
.......CTATACCTGCGATAATACGATTGA....................................................................................................................................................................................................................................................2415.00504000010000
............................................................................................................................AGCAAAATAAAGAAAGA-GC...................................................................................................................................1915.00501000040000
............................................................AACCGCCA-ATTGACGAGGAAGT................................................................................................................................................................................................2215.00501000040000
.....GACTATACCTGCGATAATACGATTG.....................................................................................................................................................................................................................................................2515.00505000000000
.....GACTATACCTGCGATAATACGAT.......................................................................................................................................................................................................................................................2315.00505000000000
.....GACTATACCTGCGATAATACGATTGAGT..................................................................................................................................................................................................................................................2815.00503000020000
.....GACTATACCTGCGATAATACG.........................................................................................................................................................................................................................................................2115.00505000000000
.........................................................................................................................CTTAGCAAAATAAAGAAAGA-GCA..................................................................................................................................2315.00501000040000
..........................................................ATAACCGCCA-ATTGACGAGGAAGT................................................................................................................................................................................................2415.00500000050000
...GTGACTATACCTGCGATAATACG.........................................................................................................................................................................................................................................................2315.00505000000000
...............................GTTTACGG-GTTCACACC--AGGTGCA.........................................................................................................................................................................................................................2415.00503000020000
.........ATACCTGCGATAATACGATT......................................................................................................................................................................................................................................................2015.00503000020000
............................................................AACCGCCA-ATTGACGAGGAAGTATTTTGT.........................................................................................................................................................................................2915.00500000050000
...............................GTTTACGG-GTTCACACC--AGGTGC..........................................................................................................................................................................................................................2314.00404000000000
.....................................................................................................................A-TACTTAGCAAAATAAAGAAAGA-GCA..................................................................................................................................2614.00400000040000
.................................................................................................................ATTAA-TACTTAGCAAAATAAAGAAAGA-GC...................................................................................................................................2914.00400000040000
.............................GAGTTTACGG-GTTCACACC--AGGTGC..........................................................................................................................................................................................................................2514.00404000000000
..........................................................................................AAT-AA-CC-A---AAAATGTACATT...............................................................................................................................................................2014.00404000000000
..................ATAATACGATTGAGTTTACGG-GT.........................................................................................................................................................................................................................................2314.00401000030000
.....GACTATACCTGCGATAATACGATTGA....................................................................................................................................................................................................................................................2614.00404000000000
....................AATACGATTGAGTTTACGG-GTT........................................................................................................................................................................................................................................2214.00400000040000
...............................................................CGCCA-ATTGACGAGGAAGTATTTTGTA........................................................................................................................................................................................2714.00400000040000
.........ATACCTGCGATAATACGATTGA....................................................................................................................................................................................................................................................2214.00404000000000
..........................................................................................................................TTAGCAAAATAAAGAAAGA-GCA..................................................................................................................................2214.00400000040000
...............................GTTTACGG-GTTCACACC--AGGT............................................................................................................................................................................................................................2114.00401000030000
..........................................................................................AAT-AA-CC-A---AAAATGTACATTAA-T...........................................................................................................................................................2313.00303000000000
.....................................................................ATTGACGAGGAAGTATTTTGTA........................................................................................................................................................................................2213.00300000030000
................................................................GCCA-ATTGACGAGGAAGTAT..............................................................................................................................................................................................2013.00310000020000
.................GATAATACGATTGAGTTTACGG-...........................................................................................................................................................................................................................................2213.00301000020000
CGTGTGACTATACCTGCGATA..............................................................................................................................................................................................................................................................2113.00303000000000
.................GATAATACGATTGAGTTTAC..............................................................................................................................................................................................................................................2013.00300000030000
...GTGACTATACCTGCGATAATA...........................................................................................................................................................................................................................................................2113.00303000000000
...................................................................A-ATTGACGAGGAAGTATTTTGTA........................................................................................................................................................................................2313.00302000010000
.....................................................................ATTGACGAGGAAGTATTTT...........................................................................................................................................................................................1913.00301000020000
................................................................GCCA-ATTGACGAGGAAGTATTTTGTA........................................................................................................................................................................................2613.00301000020000
..............................................................................................AA-CC-A---AAAATGTACATTAA-T...........................................................................................................................................................2013.00303000000000
CGTGTGACTATACCTGCGAT...............................................................................................................................................................................................................................................................2013.00302000010000
..................ATAATACGATTGAGTTTACGG-...........................................................................................................................................................................................................................................2113.00301000020000
.......................................................................................................................TACTTAGCAAAATAAAGAAAGA-GC...................................................................................................................................2413.00301000020000
.........................................................................................................................CTTAGCAAAATAAAGAAAGA-G....................................................................................................................................2113.00300000030000
.......................................................GCAATAACCGCCA-ATTGACGAGGAAGT................................................................................................................................................................................................2713.00302000010000
...GTGACTATACCTGCGATAATAC..........................................................................................................................................................................................................................................................2213.00302000010000
..................ATAATACGATTGAGTTTACGG-GTTC.......................................................................................................................................................................................................................................2513.00302000010000
CGTGTGACTATACCTGCGATAATACG.........................................................................................................................................................................................................................................................2613.00302000010000
..................................................................................................................................ATAAAGAAAGA-GCAATACAAC...........................................................................................................................2112.00201000010000
............................................................AACCGCCA-ATTGACGAGGAAGTATTTT...........................................................................................................................................................................................2712.00201000010000
..............TGCGATAATACGATTGAGTTTACGG-...........................................................................................................................................................................................................................................2512.00200000020000
..........................................TCACACC--AGGTGCAATAACCGCC................................................................................................................................................................................................................2312.00202000000000
........................................................................................GTAAT-AA-CC-A---AAAATGTACATTAA-TA..........................................................................................................................................................2612.00202000000000
........................................................................................................................ACTTAGCAAAATAAAGAAAGA-GCAA.................................................................................................................................2512.00200000020000
........................................GTTCACACC--AGGTGCAATAACCGCC................................................................................................................................................................................................................2512.00202000000000
..................ATAATACGATTGAGTTTACGG-GTT........................................................................................................................................................................................................................................2412.00201000010000
...........................................................................................................................TAGCAAAATAAAGAAAGA-GCA..................................................................................................................................2112.00200000020000
..................................................................................................................................ATAAAGAAAGA-GCAATACAACGTAAAAA....................................................................................................................2812.00200000020000
.....GACTATACCTGCGATAATACGATTGAGTT.................................................................................................................................................................................................................................................2912.00200000020000
.............................GAGTTTACGG-GTTCACACC--A...............................................................................................................................................................................................................................2012.00202000000000
...............................................................CGCCA-ATTGACGAGGAAGTATTTT...........................................................................................................................................................................................2412.00201000010000
......................................................................TTGACGAGGAAGTATTTTGT.........................................................................................................................................................................................2012.00201000010000
................................................................GCCA-ATTGACGAGGAAGTATTTTGTAA.......................................................................................................................................................................................2712.00201000010000
..................................................................................................................................ATAAAGAAAGA-GCAATACAACGT.........................................................................................................................2312.00201000010000
..............................................................CCGCCA-ATTGACGAGGAAGT................................................................................................................................................................................................2012.00200000020000
.......CTATACCTGCGATAATACGA........................................................................................................................................................................................................................................................2012.00202000000000
....................AATACGATTGAGTTTACGG-GTTCAC.....................................................................................................................................................................................................................................2512.00200000020000
..........................................................................................AAT-AA-CC-A---AAAATGTACATTAA-TA..........................................................................................................................................................2412.00202000000000
..................................................................................................................................ATAAAGAAAGA-GCAATACA.............................................................................................................................1912.00200000020000
.......................ACGATTGAGTTTACGG-GTTCAC.....................................................................................................................................................................................................................................2212.00200000020000
......................TACGATTGAGTTTACGG-GTT........................................................................................................................................................................................................................................2012.00201000010000
.GTGTGACTATACCTGCGAT...............................................................................................................................................................................................................................................................1912.00200000020000
.......CTATACCTGCGATAATACGATTG.....................................................................................................................................................................................................................................................2312.00201000010000
....TGACTATACCTGCGATAATAC..........................................................................................................................................................................................................................................................2112.00202000000000
...GTGACTATACCTGCGATAATACGA........................................................................................................................................................................................................................................................2412.00202000000000
..............................AGTTTACGG-GTTCACACC--AGGTGCA.........................................................................................................................................................................................................................2512.00202000000000
.....................................................................................................................................AAGAAAGA-GCAATACAACGT.........................................................................................................................2012.00200000020000
.......CTATACCTGCGATAATACGATT......................................................................................................................................................................................................................................................2212.00202000000000
.....................ATACGATTGAGTTTACGG-GTTCACACC--A...............................................................................................................................................................................................................................2812.00201000010000
...........ACCTGCGATAATACGATTGAGTT.................................................................................................................................................................................................................................................2312.00201000010000
........................................................................................................................ACTTAGCAAAATAAAGAAAGA-.....................................................................................................................................2112.00200000020000
.................................................................................................................................AATAAAGAAAGA-GCAATACAAAA..........................................................................................................................2312.00200000020000
............................................................................................................................AGCAAAATAAAGAAAGA-GCA..................................................................................................................................2012.00200000020000
...........................TTGAGTTTACGG-GTTCACACC--AGGT............................................................................................................................................................................................................................2512.00200000020000
.....................ATACGATTGAGTTTACGG-GTT........................................................................................................................................................................................................................................2112.00201000010000
...............................................................CGCCA-ATTGACGAGGAAGTAT..............................................................................................................................................................................................2112.00200000020000
.................GATAATACGATTGAGTTTACGG-GTTC.......................................................................................................................................................................................................................................2612.00200000020000
...........................................................................................AT-AA-CC-A---AAAATGTACATTA..............................................................................................................................................................2011.00101000000000
........................................................................GACGAGGAAGTATTTTGT.........................................................................................................................................................................................1811.00101000000000
...................................................................................................................................TAAAGAAAGA-GCAATACAACG..........................................................................................................................2111.00100000010000
......................................................TGCAATAACCGCCA-ATTGACGAGGAAGTAT..............................................................................................................................................................................................3011.00100000010000
...........................................................................................................ATGTACATTAA-TACTTAGCAA..................................................................................................................................................2111.00101000000000
.......................ACGATTGAGTTTACGG-GTTCA......................................................................................................................................................................................................................................2111.00101000000000
.................................TTACGG-GTTCACACC--AGGTGCAA........................................................................................................................................................................................................................2311.00101000000000
..............TGCGATAATACGATTGAGTTTACGG-GT.........................................................................................................................................................................................................................................2711.00100000010000
........................................................................................GTAAT-AA-CC-A---AAAATGTACATT...............................................................................................................................................................2211.00101000000000
........TATACCTGCGATAATACGATT......................................................................................................................................................................................................................................................2111.00100000010000
...............................................................CGCCA-ATTGACGAGGAAGTATT.............................................................................................................................................................................................2211.00101000000000
............................................................................................................................AGCAAAATAAAGAAAGA-GCAATACAACGT.........................................................................................................................2911.00100000010000
..............................................ACC--AGGTGCAATAACCGCCA-AT............................................................................................................................................................................................................2211.00101000000000
............................................ACACC--AGGTGCAATAACCGC.................................................................................................................................................................................................................2011.00101000000000
...............................................CC--AGGTGCAATAACCGCCA-ATTGACGA......................................................................................................................................................................................................2711.00100000010000
.........ATACCTGCGATAATACGATTGAGTTTAC..............................................................................................................................................................................................................................................2811.00101000000000
............................TGAGTTTACGG-GTTCACACC--AGGTGCAAT.......................................................................................................................................................................................................................2911.00100000010000
.......................ACGATTGAGTTTACGG-GTTCACACC--AGGT............................................................................................................................................................................................................................2911.00100000010000
........................................................................................................................ACTTAGCAAAATAAAGAAAGA-GCAATACA.............................................................................................................................2911.00100000010000
.....................ATACGATTGAGTTTACGG-GTTCACA....................................................................................................................................................................................................................................2511.00100000010000
..................................................................CA-ATTGACGAGGAAGTATTTTGTAAT-A....................................................................................................................................................................................2711.00100000010000
........TATACCTGCGATAATACGATTGAGTTTAC..............................................................................................................................................................................................................................................2911.00100000010000
...................................................................A-ATTGACGAGGAAGTATTTTGTAAT-A....................................................................................................................................................................................2611.00100000010000
..........................ATTGAGTTTACGG-GTTCACACC--AGGT............................................................................................................................................................................................................................2611.00100000010000
...................................................................................................................................TAAAGAAAGA-GCAATACAAA...........................................................................................................................2011.00101000000000
.......CTATACCTGCGATAATACGATTGAGTTTAC..............................................................................................................................................................................................................................................3011.00100000010000
..........................ATTGAGTTTACGG-GTTCACA....................................................................................................................................................................................................................................2011.00101000000000
...........ACCTGCGATAATACGATTGA....................................................................................................................................................................................................................................................2011.00101000000000
..................................................................................................................TTAA-TACTTAGCAAAATAAAGAAAG.......................................................................................................................................2511.00100000010000
.......................................................................................................................................GAAAGA-GCAATACAACGTAATTG....................................................................................................................2311.00100000010000
.......................................................GCAATAACCGCCA-ATTGACGAGGA...................................................................................................................................................................................................2411.00101000000000
...................................................................A-ATTGACGAGGAAGTATTTTGTAA.......................................................................................................................................................................................2411.00100000010000
..........................................................................................................................................................AATTGGTTTTCACCAGA---CGGC.................................................................................................2111.00100000010000
..........................................................ATAACCGCCA-ATTGACGAGG....................................................................................................................................................................................................2011.00101000000000
............................................................................................................................AGCAAAATAAAGAAAGA-GCAATACAA............................................................................................................................2611.00101000000000
.........ATACCTGCGATAATACGAT.......................................................................................................................................................................................................................................................1911.00101000000000
............................TGAGTTTACGG-GTTCACACC--AGGTGC..........................................................................................................................................................................................................................2611.00101000000000
.............CTGCGATAATACGATTGAGTTTACGG-...........................................................................................................................................................................................................................................2611.00101000000000
..................................................................CA-ATTGACGAGGAAGTATTTTGC.........................................................................................................................................................................................2311.00100000010000
................................TTTACGG-GTTCACACC--AGGTGCAATAAC....................................................................................................................................................................................................................2811.00101000000000
.......CTATACCTGCGATAATACGAT.......................................................................................................................................................................................................................................................2111.00100000010000
..........................................................................CGAGGAAGTATTTTGTAAT-AA-C.................................................................................................................................................................................2211.00100000010000
........................................................................................GTAAT-AA-CC-A---AAAATGTACATTAA-TACT........................................................................................................................................................2811.00101000000000
..........................................................................................................................................................AATTGGTTTTCACCAGA---CGGCA................................................................................................2211.00101000000000
.................................................................................................................ATTAA-TACTTAGCAAAATAAAGAAAGA-.....................................................................................................................................2711.00100000010000
.....GACTATACCTGCGATAATACGATTGAGTTT................................................................................................................................................................................................................................................3011.00100000010000
.........ATACCTGCGATAATACGATTGAGTT.................................................................................................................................................................................................................................................2511.00100000010000
.....GACTATACCTGCGATAATAC..........................................................................................................................................................................................................................................................2011.00101000000000
..................................................................................................................................ATAAAGAAAGA-GCAATACAACGTAAAA.....................................................................................................................2711.00100000010000
.............................................................ACCGCCA-ATTGACGAGGAAGT................................................................................................................................................................................................2111.00101000000000
.................................TTACGG-GTTCACACC--AGGTGCA.........................................................................................................................................................................................................................2211.00101000000000
.................................................................................................................................AATAAAGAAAGA-GCAATACAA............................................................................................................................2111.00100000010000
.......CTATACCTGCGATAATACGATTGAGTTT................................................................................................................................................................................................................................................2811.00100000010000
.......................................................GCAATAACCGCCA-ATTGACGAGGAAGTAT..............................................................................................................................................................................................2911.00100000010000
.................GATAATACGATTGAGTTTACG.............................................................................................................................................................................................................................................2111.00100000010000
..........................................................................................................................TTAGCAAAATAAAGAAAGA-.....................................................................................................................................1911.00100000010000
.............................GAGTTTACGG-GTTCACACC--AGGTG...........................................................................................................................................................................................................................2411.00100000010000
.........................................................................................................................CTTAGCAAAATAAAGAAAGA-GCAAT................................................................................................................................2511.00101000000000
.........................................................................................................................CTTAGCAAAATAAAGAAAG.......................................................................................................................................1911.00100001000000
...............................................................................................................................AAAATAAAGAAAGA-GCAATACAAAA..........................................................................................................................2511.00100000010000
................................................................................................................CATTAA-TACTTAGCAAAATAAAGAAAG.......................................................................................................................................2711.00100000010000
............................TGAGTTTACGG-GTTCACACC--AGGTG...........................................................................................................................................................................................................................2511.00100000010000
..............................................................CCGCCA-ATTGACGAGGAAGTATTTTGTA........................................................................................................................................................................................2811.00101000000000
................................................................................................................................AAATAAAGAAAGA-GCAATACAACG..........................................................................................................................2411.00100000010000
.........................................................AATAACCGCCA-ATTGACGAGGAAG.................................................................................................................................................................................................2411.00100000010000
.....................ATACGATTGAGTTTACGG-GTTCAC.....................................................................................................................................................................................................................................2411.00101000000000
..................ATAATACGATTGAGTTTACG.............................................................................................................................................................................................................................................2011.00100000010000
...........................................CACACC--AGGTGCAATAACC...................................................................................................................................................................................................................1911.00101000000000
............................TGAGTTTACGG-GTTCACA....................................................................................................................................................................................................................................1811.00101000000000
..............................AGTTTACGG-GTTCACACC--AGG.............................................................................................................................................................................................................................2111.00101000000000
.........................GATTGAGTTTACGG-GTTCAC.....................................................................................................................................................................................................................................2011.00101000000000
......................................................................TTGACGAGGAAGTATTTTGTAAT-AA-CC-A---AA.........................................................................................................................................................................3011.00100000010000
..................ATAATACGATTGAGTTTACGG-GTTCAC.....................................................................................................................................................................................................................................2711.00101000000000
.............................................CACC--AGGTGCAATAACCGCCA-ATTGACGA......................................................................................................................................................................................................2911.00100000010000
.......................................................................................................................................GAAAGA-GCAATACAACGTAAA......................................................................................................................2111.00100000010000
..................................................................CA-ATTGACGAGGAAGTATTT............................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................GGTTTTCACCAGA---CGGCAAA..............................................................................................2011.00101000000000
..........................................................................................................................TTAGCAAAATAAAGAAAGA-GCAAT................................................................................................................................2411.00101000000000
..........................................................ATAACCGCCA-ATTGACGAGGAAGTATTTT...........................................................................................................................................................................................2911.00100000010000
...........................................................TAACCGCCA-ATTGACGAGGAAG.................................................................................................................................................................................................2211.00100000010000
.GTGTGACTATACCTGCGATA..............................................................................................................................................................................................................................................................2011.00101000000000
.........................................................................................................................................AAGA-GCAATACAACGTAATTG....................................................................................................................2111.00101000000000
.........................................................................................................................CTTAGCAAAATAAAGAAAGA-GCAATAC..............................................................................................................................2711.00100001000000
.....................................................GTGCAATAACCGCCA-ATTGACGAGGAAGG................................................................................................................................................................................................2911.00100000010000
................................................................GCCA-ATTGACGAGGAAGT................................................................................................................................................................................................1811.00101000000000
........................................................................................................................ACTTAGCAAAATAAAGAAAG.......................................................................................................................................2011.00100000010000
..................................................................CA-ATTGACGAGGAAGTATTTTGTAAT-.....................................................................................................................................................................................2611.00100000010000
.......................................................................TGACGAGGAAGTATTTTGTAAT-.....................................................................................................................................................................................2211.00100000010000
..............................................ACC--AGGTGCAATAACCGCC................................................................................................................................................................................................................1911.00101000000000
...........................................................................................AT-AA-CC-A---AAAATGTACATTAA-TACTT.......................................................................................................................................................2611.00101000000000
.......................................................................................................................TACTTAGCAAAATAAAGAAA........................................................................................................................................2011.00101000000000
...............................................................................................................................AAAATAAAGAAAGA-GCAATACAA............................................................................................................................2311.00100000010000
........................................................................................................................ACTTAGCAAAATAAAGAAAGA-G....................................................................................................................................2211.00100000010000
.....GACTATACCTGCGATAATACGA........................................................................................................................................................................................................................................................2211.00100000010000
....TGACTATACCTGCGATAATACGATT......................................................................................................................................................................................................................................................2511.00101000000000
................CGATAATACGATTGAGTTTACGG-GTTCA......................................................................................................................................................................................................................................2811.00101000000000
....................................................GGTGCAATAACCGCCA-ATTGACGAGGAAGT................................................................................................................................................................................................3011.00100000010000
..........................ATTGAGTTTACGG-GTTCACACC--AGGTG...........................................................................................................................................................................................................................2711.00101000000000
............................TGAGTTTACGG-GTTCACACC--AGGTGCA.........................................................................................................................................................................................................................2711.00100000010000
...............................................................................................A-CC-A---AAAATGTACATTAA-............................................................................................................................................................1811.00101000000000
.............................................................................................................................GCAAAATAAAGAAAGA-GCA..................................................................................................................................1911.00100000010000
...........ACCTGCGATAATACGATTG.....................................................................................................................................................................................................................................................1911.00100000010000
.......CTATACCTGCGATAATACGATTGAGT..................................................................................................................................................................................................................................................2611.00101000000000
.......................................................................TGACGAGGAAGTATTTTGTAAT-AA-CC-...............................................................................................................................................................................2611.00100000010000
..............................................................CCGCCA-ATTGACGAGGAAGTATTTTGT.........................................................................................................................................................................................2711.00101000000000
.............................GAGTTTACGG-GTTCACACC--AGGTGCA.........................................................................................................................................................................................................................2611.00101000000000
.....................................................................................................................................................................................................................................AGATAAGATGTGGAATGAGC..........................2011.00100000010000
..........................................................................................AAT-AA-CC-A---AAAATGTACATTAA-TAC.........................................................................................................................................................2511.00101000000000
.............CTGCGATAATACGATTGAGT..................................................................................................................................................................................................................................................2011.00100000010000
.................................................................CCA-ATTGACGAGGAAGTAT..............................................................................................................................................................................................1911.00101000000000
................................................................................................................CATTAA-TACTTAGCAAAATAAAG...........................................................................................................................................2311.00101000000000
............CCTGCGATAATACGATTGAGTTTACG.............................................................................................................................................................................................................................................2611.00101000000000
..................................................................................................................................................TACAACGTAATTGGTTTTCACCAG.........................................................................................................2411.00101000000000
.......CTATACCTGCGATAATACG.........................................................................................................................................................................................................................................................1911.00101000000000
.............................................................................................................GTACATTAA-TACTTAGCAAA.................................................................................................................................................2011.00101000000000
..........................................................................................................AATGTACATTAA-TACTTAGCA...................................................................................................................................................2111.00100000100000
........................................................CAATAACCGCCA-ATTGACGAGGAAGT................................................................................................................................................................................................2611.00100000010000
......................................................TGCAATAACCGCCA-ATTGACGA......................................................................................................................................................................................................2211.00101000000000
........................................................................................................................................................GTAATTGGTTTTCACCAGA---CG...................................................................................................2111.00101000000000
..........TACCTGCGATAATACGATT......................................................................................................................................................................................................................................................1911.00101000000000
.GTGTGACTATACCTGCGATAATACGAT.......................................................................................................................................................................................................................................................2711.00101000000000
....................................................................................................................................AAAGAAAGA-GCAATACAACG..........................................................................................................................2011.00100000010000
.........................................................................................................................CTTAGCAAAATAAAGAAAGA-.....................................................................................................................................2011.00100000010000
........................................GTTCACACC--AGGTGCAATAACC...................................................................................................................................................................................................................2211.00101000000000
................................................................................................................CATTAA-TACTTAGCAAAATAAAGAAAGA-GC...................................................................................................................................3011.00100000010000
.........................................TTCACACC--AGGTGCAATAACCGCCA-AT............................................................................................................................................................................................................2711.00101000000000
...............................................................CGCCA-ATTGACGAGGAAGTATTT............................................................................................................................................................................................2311.00100000010000
.................................TTACGG-GTTCACACC--AGGT............................................................................................................................................................................................................................1911.00101000000000
............................................ACACC--AGGTGCAATAACCGCCA-ATTGA.........................................................................................................................................................................................................2711.00101000000000
.................GATAATACGATTGAGTTTACGG-GTTCAC.....................................................................................................................................................................................................................................2811.00100000010000
.......................................................................................................................TACTTAGCAAAATAAAGAAAG.......................................................................................................................................2111.00100000010000
..............................................................................................AA-CC-A---AAAATGTACATTAA-TAC.........................................................................................................................................................2211.00101000000000
.....................................................GTGCAATAACCGCCA-ATTGACGAGGAAGT................................................................................................................................................................................................2911.00100000010000
................................................................................................................................AAATAAAGAAAGA-GCAATACAAC...........................................................................................................................2311.00100000010000
....................................CGG-GTTCACACC--AGGTGCAATAACCGCC................................................................................................................................................................................................................2811.00101000000000
..............................................................................................................................CAAAATAAAGAAAGA-GCAATACA.............................................................................................................................2311.00100000010000
............CCTGCGATAATACGATTGAGTTTAC..............................................................................................................................................................................................................................................2511.00100000010000
.......................................................................................................................TACTTAGCAAAATAAAGAAAGA-G....................................................................................................................................2311.00101000000000
.........................................................AATAACCGCCA-ATTGACGAGGAAGTAT..............................................................................................................................................................................................2711.00100000010000
...........................................................TAACCGCCA-ATTGACGAGGAAGT................................................................................................................................................................................................2311.00101000000000
..........TACCTGCGATAATACGATTGAG...................................................................................................................................................................................................................................................2211.00100000010000
...........................................................................GAGGAAGTATTTTGTAAT-AA-C.................................................................................................................................................................................2111.00100000010000
...................................................................A-ATTGACGAGGAAGTATTT............................................................................................................................................................................................1911.00100000010000
...............................................................................................................................AAAATAAAGAAAGA-GCAAT................................................................................................................................1911.00100000010000
...........................................................TAACCGCCA-ATTGACGAGGA...................................................................................................................................................................................................2011.00100000010000
..........................................................................................................................TTAGCAAAATAAAGAAAGA-GCAATACAAC...........................................................................................................................2911.00100000010000
....................................................................................................................AA-TACTTAGCAAAATAAAGAAAGA-GCA..................................................................................................................................2711.00100000010000
....................AATACGATTGAGTTTACGG-G..........................................................................................................................................................................................................................................2011.00100000010000
....................AATACGATTGAGTTTACGG-GTTC.......................................................................................................................................................................................................................................2311.00100000010000
..........................................................................................................................TTAGCAAAATAAAGAAAGA-GC...................................................................................................................................2111.00100000010000
........................................................................................................................ACTTAGCAAAATAAAGAAAGA-GCA..................................................................................................................................2411.00100000010000
.............CTGCGATAATACGATTGAGTT.................................................................................................................................................................................................................................................2111.00101000000000
........................................................................................................................................AAAGA-GCAATACAACGTAATTGGTT.................................................................................................................2511.00100000010000
........................................................................................................................................AAAGA-GCAATACAACGTAATTG....................................................................................................................2211.00100000010000
................................................................................................................................AAATAAAGAAAGA-GCAATACAACGTAATTG....................................................................................................................3011.00100000010000
.....................................................................................................................A-TACTTAGCAAAATAAAGAAAGA-GCAATA...............................................................................................................................2911.00100000010000
CGTGTGACTATACCTGCGATAATACGAT.......................................................................................................................................................................................................................................................2811.00100000010000
...............................................................................................................................AAAATAAAGAAAGA-GCAATACAACGT.........................................................................................................................2611.00100000010000
................................................................................................................CATTAA-TACTTAGCAAAA................................................................................................................................................1811.00101000000000
droEre2
CGTGTGACTATACCTGCGATAATACGATTGAGTTCTCGG-GTGCTCACC--AGGTGCAATAACCGCAT-ATTGACGAGGAAGTATTTTGTAAC-AC-CC-G---AAAATGTACATTA---AATAA--------AAGAAATA-GCAGTACAACGTAATTGTTTTTCACCAGA---CGGCAATACAATTGAATTGCTCTTAAAGATAGCGGACTTCGCG-AAAAAGA--TCAGATAAGATGTGGAATG-GCTTTAA-TTGCTG----TTATAAATA-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................GATAATACGATTGAGTTCTCGG-GT.........................................................................................................................................................................................................................................2414.0040000220
............................TGAGTTCTCGG-GTGCTCACC--AGGT............................................................................................................................................................................................................................2413.0032000100
.........................GATTGAGTTCTCGG-GTGCTCACC--AGGT............................................................................................................................................................................................................................2713.0031000200
.....GACTATACCTGCGATAATAC..........................................................................................................................................................................................................................................................2012.0022000000
..................................................................AT-ATTGACGAGGAAGTATTTTGT.........................................................................................................................................................................................2312.0021000100
..........................................GCTCACC--AGGTGCAATAAC....................................................................................................................................................................................................................1912.0022000000
............................................................AACCGCAT-ATTGACGAGGAAGT................................................................................................................................................................................................2212.0021000010
.....................ATACGATTGAGTTCTCGG-GT.........................................................................................................................................................................................................................................2012.0020000020
.....GACTATACCTGCGATAATACG.........................................................................................................................................................................................................................................................2112.0022000000
.................GATAATACGATTGAGTTCTCGG-G..........................................................................................................................................................................................................................................2312.0020000020
........................................................................GACGAGGAAGTATTTTGT.........................................................................................................................................................................................1812.0021000100
.............................GAGTTCTCGG-GTGCTCACC--AGGT............................................................................................................................................................................................................................2312.0021000100
...GTGACTATACCTGCGATAATACGATT......................................................................................................................................................................................................................................................2612.0022000000
.........................GATTGAGTTCTCGG-GTGCT......................................................................................................................................................................................................................................1912.0020000110
............................TGAGTTCTCGG-GTGCTCACC--A...............................................................................................................................................................................................................................2111.0011000000
.......................ACGATTGAGTTCTCGG-GT.........................................................................................................................................................................................................................................1811.0010000010
.........ATACCTGCGATAATACGATT......................................................................................................................................................................................................................................................2011.0011000000
.......................ACGATTGAGTTCTCGG-GTGCTCACC--A...............................................................................................................................................................................................................................2611.0010000100
................................................................................................................CATTA---AATAA--------AAGAAATA-GCA..................................................................................................................................2111.0011000000
...........ACCTGCGATAATACGATTGAGTT.................................................................................................................................................................................................................................................2311.0010000100
CGTGTGACTATACCTGCGATAA.............................................................................................................................................................................................................................................................2211.0011000000
..............TGCGATAATACGATTGAGTTCTCGG-G..........................................................................................................................................................................................................................................2611.0010000010
...............................GTTCTCGG-GTGCTCACC--AGGT............................................................................................................................................................................................................................2111.0011000000
.........................................................AATAACCGCAT-ATTGACGAGGAAGTATT.............................................................................................................................................................................................2811.0011000000
..................................CTCGG-GTGCTCACC--AGGTGCAAT.......................................................................................................................................................................................................................2311.0010000010
.....................ATACGATTGAGTTCTCGG-...........................................................................................................................................................................................................................................1811.0011000000
...............GCGATAATACGATTGAGTTCTCGG-GT.........................................................................................................................................................................................................................................2611.0010000100
..................................................................................................................TTA---AATAA--------AAGAAATA-GC...................................................................................................................................1811.0010000010
..............................AGTTCTCGG-GTGCTCACC--AG..............................................................................................................................................................................................................................2011.0010000100
..................................................................AT-ATTGACGAGGAAGTATTTTGTAAC-A....................................................................................................................................................................................2711.0010000010
..............................................................CCGCAT-ATTGACGAGGAAGTATTTTGT.........................................................................................................................................................................................2711.0011000000
.................GATAATACGATTGAGTTCTCGG-...........................................................................................................................................................................................................................................2211.0010000100
..........................................................ATAACCGCAT-ATTGACGAG.....................................................................................................................................................................................................1911.0011000000
..............................AGTTCTCGG-GTGCTCACC--AGG.............................................................................................................................................................................................................................2111.0010000100
........................................................................................GTAAC-AC-CC-G---AAAATGTA...................................................................................................................................................................1811.0010000010
..................................................................AT-ATTGACGAGGAAGTATTTT...........................................................................................................................................................................................2111.0010000100
...................TAATACGATTGAGTTCTCGG-GT.........................................................................................................................................................................................................................................2211.0010000010
..........................ATTGAGTTCTCGG-GTGCTCACC--AGGT............................................................................................................................................................................................................................2611.0010000100
..................................................................AT-ATTGACGAGGAAGTATTTTGTAAC-AC-CC-...............................................................................................................................................................................3011.0010000100
....................................................................................................................A---AATAA--------AAGAAATA-GCAG.................................................................................................................................1811.0010000010
CGTGTGACTATACCTGCT.................................................................................................................................................................................................................................................................1811.0010000010
..........................................GCTCACC--AGGTGCAATAACC...................................................................................................................................................................................................................2011.0011000000
.....................ATACGATTGAGTTCTCGG-G..........................................................................................................................................................................................................................................1911.0010000010
...........ACCTGCGATAATACGATTG.....................................................................................................................................................................................................................................................1911.0011000000
..................ATAATACGATTGAGTTCTCGG-GT.........................................................................................................................................................................................................................................2311.0010000100
.....................................................................ATTGACGAGGAAGTATTTT...........................................................................................................................................................................................1911.0010000100
...........................................................TAACCGCAT-ATTGACGAGGAAGTT...............................................................................................................................................................................................2411.0011000000
.............................................CACC--AGGTGCAATAACCGCAT-ATTGA.........................................................................................................................................................................................................2611.0011000000
.......................................................GCAATAACCGCAT-ATTGACGAGGAAGT................................................................................................................................................................................................2711.0011000000
.............................GAGTTCTCGG-GTGCTCACC--AGGTGC..........................................................................................................................................................................................................................2511.0011000000
...............................GTTCTCGG-GTGCTCACC--AGG.............................................................................................................................................................................................................................2011.0011000000
....................AATACGATTGAGTTCTCGG-...........................................................................................................................................................................................................................................1911.0011000000
..........................ATTGAGTTCTCGG-GTGCTCACC--AGG.............................................................................................................................................................................................................................2511.0011000000
.................GATAATACGATTGAGTTCTCGG-GTGCT......................................................................................................................................................................................................................................2711.0010000100
..........................................GCTCACC--AGGTGCAATAACCGC.................................................................................................................................................................................................................2211.0011000000
..............................................................................................................................................................GTTTTTCACCAGA---CGGCAATA.............................................................................................2111.0010000100
...................................................................T-ATTGACGAGGAAGTATTTTGTAA.......................................................................................................................................................................................2411.0010000100
.................GATAATACGATTGAGTTCTC..............................................................................................................................................................................................................................................2011.0010000100
...........................................................TAACCGCAT-ATTGACGAGGAAGTATTT............................................................................................................................................................................................2711.0011000000
.................................................................................................................ATTA---AATAA--------AAGAAATA-GCAGT................................................................................................................................2211.0010000100
...GTGACTATACCTGCGATAATACGA........................................................................................................................................................................................................................................................2411.0011000000
......................TACGATTGAGTTCTCGG-GTGCT......................................................................................................................................................................................................................................2211.0010000100
............................TGAGTTCTCGG-GTGCTCACC--AGGTGC..........................................................................................................................................................................................................................2611.0011000000
...........ACCTGCGATAATACGATTGAG...................................................................................................................................................................................................................................................2111.0011000000
...........................TTGAGTTCTCGG-GTGCTCACC--AGGTGC..........................................................................................................................................................................................................................2711.0011000000
...GTGACTATACCTGCGATAATAC..........................................................................................................................................................................................................................................................2211.0011000000
...............................................................CGCAT-ATTGACGAGGAAGTA...............................................................................................................................................................................................2011.0011000000
...GTGACTATACCTGCGATAATACGAT.......................................................................................................................................................................................................................................................2511.0011000000
.....................................................................ATTGACGAGGAAGTATTTTGTAAC-AC-C.................................................................................................................................................................................2711.0011000000
........................................................................GACGAGGAAGTATTTTGTAAC-AC-..................................................................................................................................................................................2311.0011000000
..........TACCTGCGATAATACGATT......................................................................................................................................................................................................................................................1911.0011000000
.........ATACCTGCGATAATACGAT.......................................................................................................................................................................................................................................................1911.0010000100
.....................................................................ATTGACGAGGAAGTATTTTGTAAC-AC-CC-...............................................................................................................................................................................2811.0010000100
.......................................................................TGACGAGGAAGTATTTTGTAAC-AC-CC-...............................................................................................................................................................................2611.0011000000
..............................................................................................................................................................GTTTTTCACCAGA---CGGCAATACAATTGA......................................................................................2811.0011000000
...........................................................................................................................AA--------AAGAAATA-GCAGTACAAAA..........................................................................................................................2150.2010000010
droSec2
CGTGTGACTATACCTGCGATAATGCGATTGAGTTCTCTG-GTGCACACC--AGGTGCAATAACCGTCAATTTGACGAGGTAGTATTTTGTAAC-AC-CC-A---AAAATGTACATTAA-TACTAATCAAAATAAAGAAATA-GCAATACAACGTAATTGTTTTTCACCAGA---CGGCA-TACAATTGAGTTCCTCTTAAAGATAACGGACTTCGCG-AAAAAGA--TCAGATAAGATGGTGAATGAGCTTCGA-TTGGTG----TTATAAATA-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................CTAATCAAAATAAAGAAATA-GCA..................................................................................................................................2312.0022000
.....................ATGCGATTGAGTTCTCTG-GTGCAC.....................................................................................................................................................................................................................................2412.0021010
...................................................................................................................................................................................................................................................ATGAGCTTCGA-TTGGTG----TTATA.....2211.0010100
............................TGAGTTCTCTG-GTGCACACC--AGGT............................................................................................................................................................................................................................2411.0010010
.........................................................AATAACCGTCAATTTGACGAGGT...................................................................................................................................................................................................2311.0010010
............................................ACACC--AGGTGCAATAACCGT.................................................................................................................................................................................................................2011.0010001
.........ATACCTGCGATAATGCGATTGA....................................................................................................................................................................................................................................................2211.0010100
..................................................................CAATTTGACGAGGTAGTATTTT...........................................................................................................................................................................................2211.0011000
..................................................................................................................................................................................................................................................AATGAGCTTCGA-TTGGTG----TT........2011.0010100
.....GACTATACCTGCGATAATGCGAT.......................................................................................................................................................................................................................................................2311.0011000
..........................ATTGAGTTCTCTG-GTGCACACC--AGGTGC..........................................................................................................................................................................................................................2811.0011000
...................................................................AATTTGACGAGGTAGTATTTTGT.........................................................................................................................................................................................2311.0010100
..........TACCTGCGATAATGCGATTGAGTT.................................................................................................................................................................................................................................................2411.0010100
.......................GCGATTGAGTTCTCTG-GTGCAC.....................................................................................................................................................................................................................................2211.0010100
...........ACCTGCGATAATGCGATTGAGT..................................................................................................................................................................................................................................................2211.0010100
droSim2
CGTGTGACTATACCTGCGATAATGCGATTGAGTTGTCTG-GTGCACACC--AGGTGCAATAACCGCCAACTTGACGAGGTAGTATTTTGTAAC-AC-CC-A---AAAATGTACATTAA-TACTAATCAAAATAAAGAAATA-GCAATACAACGTAATTGTTTTTCACCAGA---CGGCA-TACAATTGAGTTCCTCTTAAAGATAACGGACTTCGCG-AAAAAGA--TCAGATAAGATGGTGAATGAGCTTCGA-TTGGGG----TTATAAATA-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
CGTGTGACTATACCTGCGATAATG...........................................................................................................................................................................................................................................................2412.00200020000000000000
.........................................................AATAACCGCCAACTTGACGA......................................................................................................................................................................................................2012.00200020000000000000
..........................................................ATAACCGCCAACTTGACGAGGT...................................................................................................................................................................................................2212.00200020000000000000
.......................................................GCAATAACCGCCAACTTGACGAGGTAGT................................................................................................................................................................................................2812.00200020000000000000
...GTGACTATACCTGCGATAATGCGATT......................................................................................................................................................................................................................................................2612.00200020000000000000
CGTGTGACTATACCTGCGATAATGCGAT.......................................................................................................................................................................................................................................................2812.00200020000000000000
.........................................................AATAACCGCCAACTTGACGAGGTAGT................................................................................................................................................................................................2612.00201010000000000000
.........ATACCTGCGATAATGCGATTGAGTT.................................................................................................................................................................................................................................................2512.00200020000000000000
.....................................................GTGCAATAACCGCCAACTTGACGAG.....................................................................................................................................................................................................2511.00100010000000000000
...............................GTTGTCTG-GTGCACACC--AGGTGC..........................................................................................................................................................................................................................2311.00100010000000000000
.......CTATACCTGCGATAATGCGATTGAGT..................................................................................................................................................................................................................................................2611.00100010000000000000
...GTGACTATACCTGCGATAATGC..........................................................................................................................................................................................................................................................2211.00100010000000000000
......................TGCGATTGAGTTGTCTG-GTGC.......................................................................................................................................................................................................................................2111.00100010000000000000
....................AATGCGATTGAGTTGTCTG-GTGCAC.....................................................................................................................................................................................................................................2511.00100010000000000000
............CCTGCGATAATGCGATTGAGTTGTCT.............................................................................................................................................................................................................................................2611.00100010000000000000
............................................................AACCGCCAACTTGACGAGGTAGT................................................................................................................................................................................................2311.00100010000000000000
.......................................................GCAATAACCGCCAACTTGACGAGG....................................................................................................................................................................................................2411.00100010000000000000
..........TACCTGCGATAATGCGATTGAGTT.................................................................................................................................................................................................................................................2411.00100010000000000000
........................................................................................................................ACTAATCAAAATAAAGAAATA-GCA..................................................................................................................................2411.00100010000000000000
..........................................................................................AAC-AC-CC-A---AAAATGTACATTAA-TACTAA......................................................................................................................................................2811.00100010000000000000
.............................GAGTTGTCTG-GTGCACACC--AGGT............................................................................................................................................................................................................................2311.00100010000000000000
.....................ATGCGATTGAGTTGTCTG-G..........................................................................................................................................................................................................................................1911.00100010000000000000
.............................................................................GGTAGTATTTTGTAAC-AC-CC-A---AAAAT......................................................................................................................................................................2611.00100010000000000000
.............CTGCGATAATGCGATTGAGTTGTCTG-...........................................................................................................................................................................................................................................2611.00100010000000000000
.......................................................GCAATAACCGCCAACTTGACGAGGTA..................................................................................................................................................................................................2611.00100010000000000000
.....................................................................CTTGACGAGGTAGTATTTTGT.........................................................................................................................................................................................2111.00101000000000000000
...............................................................................................................ACATTAA-TACTAATCAAAATAAAGAA.........................................................................................................................................2611.00100010000000000000
..............................................................................GTAGTATTTTGTAAC-AC-CC-A---AA.........................................................................................................................................................................2211.00101000000000000000
..........................................................ATAACCGCCAACTTGACGAGGTA..................................................................................................................................................................................................2311.00100010000000000000
.................GATAATGCGATTGAGTTGTCTG-GT.........................................................................................................................................................................................................................................2411.00100010000000000000
...................................................................AACTTGACGAGGTAGTATTTTGTA........................................................................................................................................................................................2411.00101000000000000000
.........ATACCTGCGATAATGCGA........................................................................................................................................................................................................................................................1811.00100010000000000000
.................GATAATGCGATTGAGTTGTCTG-GTGC.......................................................................................................................................................................................................................................2611.00101000000000000000
CGTGTGACTATACCTGCGATAATGC..........................................................................................................................................................................................................................................................2511.00101000000000000000
............................TGAGTTGTCTG-GTGCACACC--AGGTG...........................................................................................................................................................................................................................2511.00100010000000000000
.....................................................................CTTGACGAGGTAGTATTTT...........................................................................................................................................................................................1911.00100010000000000000
.GTGTGACTATACCTGCGAT...............................................................................................................................................................................................................................................................1911.00100010000000000000
.......................................................................TGACGAGGTAGTATTTTGTAAC-.....................................................................................................................................................................................2211.00101000000000000000
............CCTGCGATAATGCGATTGAGTT.................................................................................................................................................................................................................................................2211.00100010000000000000
.......................................................GCAATAACCGCCAACTTGACGAGGT...................................................................................................................................................................................................2511.00100010000000000000
.......................................................GCAATAACCGCCAACTTGACGAG.....................................................................................................................................................................................................2311.00100010000000000000
CGTGTGACTATACCTGCGATAAT............................................................................................................................................................................................................................................................2311.00100010000000000000
.........................................................AATAACCGCCAACTTGACGAGGT...................................................................................................................................................................................................2311.00100010000000000000
.........................................................AATAACCGCCAACTTGACGAGGTAGTA...............................................................................................................................................................................................2711.00100010000000000000
CGTGTGACTATACCTGCGATA..............................................................................................................................................................................................................................................................2111.00100010000000000000
..............................................................CCGCCAACTTGACGAGGTAGTATTT............................................................................................................................................................................................2511.00100010000000000000
......................TGCGATTGAGTTGTCTG-GTGCACACC--AGG.............................................................................................................................................................................................................................2911.00100010000000000000
.....GACTATACCTGCGATAATGCGATTGAGTT.................................................................................................................................................................................................................................................2911.00100010000000000000
CGTGTGACTATACCTGCG.................................................................................................................................................................................................................................................................1811.00101000000000000000
.........................................................AATAACCGCCAACTTGACGAGGTA..................................................................................................................................................................................................2411.00100010000000000000
...........................TTGAGTTGTCTG-GTGCACACC--AGGTGCA.........................................................................................................................................................................................................................2811.00100010000000000000
.........................................................AATAACCGCCAACTTGACGAG.....................................................................................................................................................................................................2111.00100010000000000000
.......CTATACCTGCGATAATGC..........................................................................................................................................................................................................................................................1811.00100010000000000000
...........................................................TAACCGCCAACTTGACGAGG....................................................................................................................................................................................................2011.00100010000000000000
..............................................ACC--AGGTGCAATAACCGCCAACT............................................................................................................................................................................................................2311.00100010000000000000
.....GACTATACCTGCGATAATGCGATTGA....................................................................................................................................................................................................................................................2611.00100010000000000000
........................CGATTGAGTTGTCTG-GTGC.......................................................................................................................................................................................................................................1911.00101000000000000000
...................................................................................ATTTTGTAAC-AC-CC-A---AAAATGTACATT...............................................................................................................................................................2711.00100010000000000000
...................TAATGCGATTGAGTTGTCTG-GTGCA......................................................................................................................................................................................................................................2511.00100010000000000000
.........................................................AATAACCGCCAACTTGACGAGGA...................................................................................................................................................................................................2311.00100010000000000000
...............................................................CGCCAACTTGACGAGGTAGT................................................................................................................................................................................................2011.00100010000000000000
.............................GAGTTGTCTG-GTGCACACC--AGGTGCA.........................................................................................................................................................................................................................2611.00100010000000000000
.........................GATTGAGTTGTCTG-GTGCA......................................................................................................................................................................................................................................1911.00100010000000000000
CGTGTGACTATACCTGCGATAATGCGATT......................................................................................................................................................................................................................................................2911.00100010000000000000
...........................................................................................................................AATCAAAATAAAGAAATA-GCAATACA.............................................................................................................................2611.00100010000000000000
..........................................................ATAACCGCCAACTTGACGAG.....................................................................................................................................................................................................2011.00100010000000000000
........................................................................................GTAAC-AC-CC-A---AAAATGTACATTAA-TAC.........................................................................................................................................................2711.00100010000000000000
.............................GAGTTGTCTG-GTGCACACC--AGGTGC..........................................................................................................................................................................................................................2511.00100010000000000000
..............TGCGATAATGCGATTGAGTTGTCTG-...........................................................................................................................................................................................................................................2511.00100010000000000000
.GTGTGACTATACCTGCGATAATGCG.........................................................................................................................................................................................................................................................2511.00100010000000000000
dm3
CGTGTGACTATACCTGCGATAATGCGATTGAGTTCTCTG-GCGCACACC--AAGTGCAATAACCGCAA-ATTTAAGAGGTAGTATTTTGTAAC-AC-CC-A---AAAATGTACATTAA-TACCAAGCAAAATAAAGAAATA-GCAATACAACGTAATTGGTTTTCATCAGA-----------CAATTGAGTTCCTATTAAAGATAACGGACTTCGCG-AAAAAGA--TCAGATAAGATGGTGAATGAGCTTCGA-TTGGGT----TTATAAATA-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
CGTGTGACTATACCTGCG.................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AATGCGATTGAGTTCTCT.............................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AATGCGATTGAGTTCTCTG-GT.........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
CGTGTGACTATACCTGCGATAATGCGAT.......................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................AGTATTTTGTAAC-AC-CC-A---...........................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGCGATAATGCGATTGAGTT.................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...................TAATGCGATTGAGTTCTCTG-GT.........................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
..................ATAATGCGATTGAGTTCTCT.............................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
CGTGTGACTATACCTGCGAT...............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TAATGCGATTGAGTTCTCTG-...........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TACCTGCGATAATGCGATTGAGTTCT...............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GATAATGCGATTGAGTTCTCTG-GC.........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................A-ATTTAAGAGGTAGTATT.............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AATGCGATTGAGTTCTCTG-GC.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CGCAA-ATTTAAGAGGTAGT................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................GTTCTCTG-GCGCACACC--AAGTG...........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CCTGCGATAATGCGATTG.....................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TTGTAAC-AC-CC-A---AAAATGTAC..................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCGATAATGCGATTGAGTTCTCTG-ATC........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAAGAGGTAGTATTTTGTAAC-.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................TTTAAGAGGTAGTATTTTGTA........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................ATAACCGCAA-ATTTAAGAG.....................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GCGATTGAGTTCTCTG-GCGC.......................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................AAGAGGTAGTATTTTGTAAC-A....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATAATGCGATTGAGTTCTC..............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................ATTTAAGAGGTAGTATTTT...........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGACTATACCTGCGATAATGCGATTG.....................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................GATGGTGAATGAGCTTCG......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATACCTGCGATAATGCGATTGA....................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...GTGACTATACCTGCGATAATGC..........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GCAA-ATTTAAGAGGTAGTATTTTGTA........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................CAATAACCGCAA-ATTTAAGAGGTA..................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................ATTGAGTTCTCTG-GCGCACACC--AAGT............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATACCTGCGATAATGCGAT.......................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AGTGCAATAACCGCAA-ATTTAAGAGGT...................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AAGAGGTAGTATTTTGTAAC-.....................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............CTGCGATAATGCGATTGAG...................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................CACC--AAGTGCAATAACCGCA................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CGCAA-ATTTAAGAGGTAGTAT..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........ACCTGCGATAATGCGATTGAGTTCTCTG-...........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................TAAGATGGTGAATGAGCTTCGA-TTGGGG----..........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ATGTACATTAA-TACCAAGCAAAATAAAGAA.........................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CCTGCGATAATGCGATTGAGTTCTCTG-GC.........................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGCGATAATGCGATTGAGTTCTCTG-...........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TAACCGCAA-ATTTAAGAGGT...................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...GTGACTATACCTGCGAT...............................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AGAGGTAGTATTTTGTATA-.....................................................................................................................................................................................1940.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCGATAATGCGATTGAGCG.................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
droEug1
CTTGTGACTATACCTGCGACAATGAAGTCAAGTTCTCCG-ATGTCTTCC--AGGTGCAATAACCGCCA-ATATATACTCTAGTATTTTGTAAC-AC-CC-ACAATAAATGAACATTCA-TACTAA--AAAATGAAAAAATA-ACAATTCAGCGTAATTGGTTTTTAGCAGA---CGGCAATTCAATTGAGTTCCTCTTAAAGATAACGGGCTTCGCA-AAAAAGA--TCAGATAAGATGGCGAATGAGCTTCAA-TTGGGG----TTATAAATA-SizeHit CountTotal NormTotal
No Reads
droBia1
CGTGTGACTATACCTGCGACAATGCAGTCGAGTTCTCCA-ATGACTTCC--AGGTGCAATAACCGCCA-GTAAGAGAGGTAGTATTTTGTAAC-ACACC-C---GAATTGTACATAAA-TACTAATCGAAATAAAGGAATA-CCAATTCAACGTAATTGGTTTTTAGCAGA---CTGCGGTTCAATTGAGTTCCTCTTAAAGATAACGTACTTCGCA-AAAAAGA--CCAGATAAGACGACGAATGAGCTTCTA-TTGGGG----TTATAAATA-SizeHit CountTotal NormTotal
No Reads
droTak1
CGTGTGACTATACCTGCGACAATGCAGTCGAGTTCTCTA-ATGATTTTC--AGGTGCAATAACCGGCA-ATAAAT-AGGTAGTATTTTGTAAC-ACACC-A---AAAATGTACACATG-TACTAAGCAAAATAAAGGAAAA-GCAATTCAACGTAATTAATTTTCAGTAGA---CGGCAGTTCAAATGAGTTCCTCTTAAAGATAACGGGCTTCGCAAAAAAAGA--TGCGATAAGACGGCGAATAAGCTTCAA-ATGGGG----TTATAAATA-SizeHit CountTotal NormTotal
No Reads
droEle1
CGTGTGACTATACTTGCGACAATGAAGTAAAATTCTCTG-ACGACTACG--AGGTGCAATAACCGCTA-TTAAATGAAGTAGAATTTTGTAAGCAC-AC-GA-AAAAATGTACATACA-TAATAAACAAAATAAAGAAA-A-ACAATTGAACGTAATTGGTTTTCAGTAGA---CGGCTGCTCAATTGAGTTCCTCTTAAAGATAACGGGCTTCGCA-AAAAAAATACCAGATAAG-TGGGGAATGAGCTTTCA-TTG-GG----TTATAAATATSizeHit CountTotal NormTotal
No Reads
droRho1
CGTGTGACTATACTTGCGACAATGGAATCGAACTCTCTG-ATGACTACT--AGGTGCAATAACCGCCA-TTAAATGAGGTAGTATTTCGTTAC-AC-AC-G---AAAATGTATACACA-TAATAAACAAAATAAAGGAA----------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CGTGTGATTATACTTGCGACAATGGACTCGCGTTTTCTG-ATGTCTAGC--AAGTGCAATAACCGCTA-GCAATTGGTGTATCATTTTGTAAT-AA-CCCAC-AAAAATGTACGTACT-TAGGAAGCAAAATAAAGAAATAAACAATTCAACGTAATTGATTTTAAGCAGA---CTGGTGTTCAATTGAGTTCCTCTTAAAGATAACACGCTTCGCG-AAAATTA--CGAGATAAGATGGTGAATGAGCCATACAATGGGG----TTATAAATA-SizeHit CountTotal NormTotal
No Reads
droKik1
CATGCGACTTTACCTGCGACAATACAGTCGAACTCGCAG-CAGTCTAGC--AGGTGCAATGAACGGACAATAAATTAGGAAGAATTTTGTAAC-AC-AC-AAAAAAAATGTA-ATCAG-AAATAAACGCAGTAAAACAAAA-GCAATCCAAAGTAATTGGCTTTCAGCAGA---CGGCAGCTCAATTGAGTTCCTCTTCAAGATAACGAGCTTCGCG-AAAAAGA--TCCGATAAGATGG-GAATGAGCTCCAG-TAAGGG----TTATAAATA-SizeHit CountTotal NormTotal
No Reads
droAna3
GCTGTGACTACACCTGTGACAGCAGTGTCTAGACTCTACTCTGTCGTAAAAGGGTGCAATGTACGCCTTATTT---AGGAAGCAATTT-TAAC-AA-CA-A---AAAA-A-AAATTAAAAAATAAACGCAATATTGCAACA-CAAAATATACGCAATTCCTTTTCAGTAGAATTCACCAGTTCAATTATATTCCCCTTGAAGATAACGAGCTTTCCA-ATGGAGA--TCCGATAACAAGCCGAAGTAGCTCCCA-TTCAGG----TTATAAAAG-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................GTGTCTAGACTCTACTCTGT.......................................................................................................................................................................................................................................20110.00101000000
........................GTGTCTAGACTCTACTCTGTC......................................................................................................................................................................................................................................21110.00101000000
..........................GTCTAGACTCTACTCTGTC......................................................................................................................................................................................................................................1917.007500011
............................................CGTAAAAGGGTGCAATGTACGCCTT..............................................................................................................................................................................................................2513.003000030
.......CTACACCTGTGACAGCAGT.........................................................................................................................................................................................................................................................1912.002000011
.....GACTACACCTGTGACAGCAGTGTCT.....................................................................................................................................................................................................................................................2512.002000002
.....GACTACACCTGTGACAGCAGT.........................................................................................................................................................................................................................................................2112.002200000
....................AGCAGTGTCTAGACTCTACTCTGT.......................................................................................................................................................................................................................................2412.002200000
....................AGCAGTGTCTAGACTCTACTCTGTC......................................................................................................................................................................................................................................2512.002200000
.............................................GTAAAAGGGTGCAATGTACGCCT...............................................................................................................................................................................................................2312.002000020
...GTGACTACACCTGTGACAGCAGT.........................................................................................................................................................................................................................................................2312.002200000
..........................GTCTAGACTCTACTCTGTCGTAAAAG...............................................................................................................................................................................................................................2612.002200000
..........................GTCTAGACTCTACTCTGT.......................................................................................................................................................................................................................................1812.002100001
.............................................GTAAAAGGGTGCAATGTACGCCTT..............................................................................................................................................................................................................2412.002000110
.................................CTCTACTCTGTCGTAAAAGGGT............................................................................................................................................................................................................................2211.001000010
............................................CGTAAAAGGGTGCAATGT.....................................................................................................................................................................................................................1811.001100000
......ACTACACCTGTGACAGCAGTGTCTA....................................................................................................................................................................................................................................................2511.001000010
.................................CTCTACTCTGTCGTAAAAGG..............................................................................................................................................................................................................................2011.001000001
............................................................GTACGCCTTATTT---AGGAAGC................................................................................................................................................................................................2011.001100000
.......................................................................TT---AGGAAGCAATTT-TAAC-AA-CA-A---AA.........................................................................................................................................................................2511.001000010
.....GACTACACCTGTGACAGCA...........................................................................................................................................................................................................................................................1911.001100000
.........................................................AATGTACGCCTTATTT---AGGA...................................................................................................................................................................................................2011.001000001
............................................CGTAAAAGGGTGCAATGTACGCCT...............................................................................................................................................................................................................2411.001100000
.......................................................GCAATGTACGCCTTATTT---AGGAAGCA...............................................................................................................................................................................................2611.001000010
..............................AGACTCTACTCTGTCGTAAAAGGG.............................................................................................................................................................................................................................2411.001000010
...GTGACTACACCTGTGACAGCAGTGT.......................................................................................................................................................................................................................................................2511.001100000
....................................................GGTGCAATGTACGCCTTATTT---AGGAA..................................................................................................................................................................................................2611.001100000
..............................AGACTCTACTCTGTCGTAAAAGG..............................................................................................................................................................................................................................2311.001100000
.........................TGTCTAGACTCTACTCTGTC......................................................................................................................................................................................................................................2011.001100000
.....................................................GTGCAATGTACGCCTTATTT---AGGAAGCA...............................................................................................................................................................................................2811.001100000
.............................................GTAAAAGGGTGCAATGTACGC.................................................................................................................................................................................................................2111.001100000
.......................AGTGTCTAGACTCTACTCTGT.......................................................................................................................................................................................................................................2111.001100000
.......................AGTGTCTAGACTCTACTCT.........................................................................................................................................................................................................................................1911.001100000
.......................................................GCAATGTACGCCTTATTT---AGGAAGC................................................................................................................................................................................................2511.001000001
.......................................................GCAATGTACGCCTTATTT---AGG....................................................................................................................................................................................................2111.001100000
........................................................CAATGTACGCCTTATTT---AGGAAGCAATT............................................................................................................................................................................................2811.001100000
........................GTGTCTAGACTCTACTCTG........................................................................................................................................................................................................................................1911.001100000
...............................GACTCTACTCTGTCGTAAAAG...............................................................................................................................................................................................................................2111.001100000
..........CACCTGTGACAGCAGTGTCTA....................................................................................................................................................................................................................................................2111.001000010
droBip1
GCTGTGACTACACCTGTGACAGCAGTATCTAGTGTCTAGACAGTCGAAA--AGGTGCAATGAACGCCTAATAT---AGGAAGCAATTT-TAAG-AA-AT-A---AAAA--TACTTTAATAAATAAGC--AATATTGCAACA-CAAAATCTACGCAATTCGTATTCAGTAGAATCCAGCAGTTCAATTGACTTCCCATTGAAGATAACAAGCCTTCCA-ATGGAGA--TCCGATAACAAGCCAAAGTAGCCCCCA-TTCAGG----TTATAAAAG-SizeHit CountTotal NormTotal
No Reads
dp5
GCTGTGACTACACATGCGACTCCCGCTTTGCGTACCCTG-AAGACAATC--AGGAGCAATGAACGTTT---------------ATGTCGTAAC-AA-AC-G---AAAATGCG--TTCC-CAATAAATGCAATAATACAAAA-TACA-TTTAAGCAATTAAATTTTTGTAGC---CGACAACTCAAGAGGTTTCCCCTTATAGATAACGGGTTTCACACAAAAAGA--TCTGATAAGAAGTGCAATGAGCTACCT-ATAGCTTTACTTATAAATA-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................AGACAATC--AGGAGCAATGAAC...................................................................................................................................................................................................................21110.00100900001000
.....GACTACACATGCGACTCCCGCTTTGC....................................................................................................................................................................................................................................................26110.001001000000000
.........ACACATGCGACTCCCGCTTTG.....................................................................................................................................................................................................................................................21110.001001000000000
......................................G-AAGACAATC--AGGAGCAATGAAC...................................................................................................................................................................................................................2319.0090800001000
................................................C--AGGAGCAATGAACGTTT---------------ATGTC...........................................................................................................................................................................................2318.0080500003000
................................................C--AGGAGCAATGAACGTTT---------------ATGTCGT.........................................................................................................................................................................................2517.0070400003000
.........ACACATGCGACTCCCGCTTTGC....................................................................................................................................................................................................................................................2216.0060600000000
.....GACTACACATGCGACTCCCGC.........................................................................................................................................................................................................................................................2116.0060600000000
........................................AAGACAATC--AGGAGCAATGAAC...................................................................................................................................................................................................................2215.0051300001000
..........................................................ATGAACGTTT---------------ATGTCGTAAC-AA-AC-G---...........................................................................................................................................................................2515.0050500000000
................................................C--AGGAGCAATGAACGTTT---------------ATGT............................................................................................................................................................................................2214.0040200002000
................................................................GTTT---------------ATGTCGTAAC-AA-AC-G---...........................................................................................................................................................................1914.0040400000000
....................................................GGAGCAATGAACGTTT---------------ATGT............................................................................................................................................................................................2014.0040400000000
.................GACTCCCGCTTTGCGTACCCT.............................................................................................................................................................................................................................................2114.0040400000000
..................................................................TT---------------ATGTCGTAAC-AA-AC-G---AAAATGC....................................................................................................................................................................2414.0040300001000
.....................................................GAGCAATGAACGTTT---------------ATGT............................................................................................................................................................................................1913.0030200001000
.....GACTACACATGCGACTCCCGCT........................................................................................................................................................................................................................................................2213.0030300000000
....................................................................................................G---AAAATGCG--TTCC-CAATAAATG...................................................................................................................................................2213.0030300000000
.....................................................GAGCAATGAACGTTT---------------ATGTC...........................................................................................................................................................................................2013.0030300000000
.....GACTACACATGCGACTCCCGCTTTG.....................................................................................................................................................................................................................................................2513.0030300000000
......................................G-AAGACAATC--AGGAGCAATGAACGT.................................................................................................................................................................................................................2513.0030100002000
..................................................................................................C-G---AAAATGCG--TTCC-CAATAA......................................................................................................................................................2013.0030300000000
.................GACTCCCGCTTTGCGTACCCTG-A..........................................................................................................................................................................................................................................2313.0030300000000
.....................................................GAGCAATGAACGTTT---------------ATGTCGT.........................................................................................................................................................................................2213.0030300000000
.........ACACATGCGACTCCCGCTTTGCGTACC...............................................................................................................................................................................................................................................2713.0030300000000
.....................................................................................GTCGTAAC-AA-AC-G---AAAATGC....................................................................................................................................................................2013.0030300000000
.......................................................................................CGTAAC-AA-AC-G---AAAATGCG--T................................................................................................................................................................2013.0030100002000
....................................................GGAGCAATGAACGTTT---------------ATGTCGT.........................................................................................................................................................................................2313.0030300000000
..........CACATGCGACTCCCGCTTTGCGTACCCT.............................................................................................................................................................................................................................................2813.0030300000000
............CATGCGACTCCCGCTTTGC....................................................................................................................................................................................................................................................1913.0030300000000
................................................................GTTT---------------ATGTCGTAAC-AA-AC-G---AAAATGC....................................................................................................................................................................2613.0030200001000
..............................................ATC--AGGAGCAATGAACGTTT---------------ATGTC...........................................................................................................................................................................................2512.0020100001000
....................................................................................................G---AAAATGCG--TTCC-CAATAA......................................................................................................................................................1912.0020200000000
.............ATGCGACTCCCGCTTTGCGTACCCT.............................................................................................................................................................................................................................................2512.0020200000000
.......CTACACATGCGACTCCCGCTTTGC....................................................................................................................................................................................................................................................2412.0020200000000
........................................................................................................AAAATGCG--TTCC-CAATAAATGC..................................................................................................................................................2212.0020000002000
..........................TTTGCGTACCCTG-AAGACA.....................................................................................................................................................................................................................................1912.0020200000000
.....GACTACACATGCGACTCCCGCTT.......................................................................................................................................................................................................................................................2312.0020200000000
....................................................................................................G---AAAATGCG--TTCC-CAATAAATGC..................................................................................................................................................2312.0020200000000
.........................................................AATGAACGTTT---------------ATGTCGTAAC-.....................................................................................................................................................................................2112.0020200000000
.....GACTACACATGCGACTCCC...........................................................................................................................................................................................................................................................1912.0020200000000
......................................G-AAGACAATC--AGGAGCAATGAACGTTT---------------................................................................................................................................................................................................2712.0020200000000
..................ACTCCCGCTTTGCGTACC...............................................................................................................................................................................................................................................1812.0020200000000
......................................G-AAGACAATC--AGGAGCAAT.......................................................................................................................................................................................................................1912.0020100001000
..........................................................................................AAC-AA-AC-G---AAAATGCG--TTCC-C...........................................................................................................................................................2112.0020200000000
...............................................................................................A-AC-G---AAAATGCG--TTCC-CAATAAATG...................................................................................................................................................2512.0020200000000
................................................C--AGGAGCAATGAACGTTT---------------AT..............................................................................................................................................................................................2012.0020200000000
..............................................ATC--AGGAGCAATGAACGTTT---------------ATGTCGT.........................................................................................................................................................................................2712.0020200000000
..........CACATGCGACTCCCGCTTTGC....................................................................................................................................................................................................................................................2112.0020200000000
.....GACTACACATGCGACTCCCGCTTTGCGT..................................................................................................................................................................................................................................................2812.0020100001000
.......................................................GCAATGAACGTTT---------------ATGTCGT.........................................................................................................................................................................................2012.0020200000000
........TACACATGCGACTCCCGCTTTGC....................................................................................................................................................................................................................................................2312.0020200000000
.....................................................GAGCAATGAACGTTT---------------ATGTCGTAAC-.....................................................................................................................................................................................2512.0020200000000
............................TGCGTACCCTG-AAGACAATC--A...............................................................................................................................................................................................................................2112.0020200000000
...................CTCCCGCTTTGCGTACCCT.............................................................................................................................................................................................................................................1912.0020100001000
........................................AAGACAATC--AGGAGCAATGA.....................................................................................................................................................................................................................2012.0020200000000
.................GACTCCCGCTTTGCGTACC...............................................................................................................................................................................................................................................1912.0020200000000
..................................................................................................C-G---AAAATGCG--TTCC-CAATAAATGCAAT...............................................................................................................................................2712.0020200000000
...............................................TC--AGGAGCAATGAACGTTT---------------ATGTC...........................................................................................................................................................................................2412.0020100001000
..........................................................ATGAACGTTT---------------ATGTCGTAAC-AA-AC-...............................................................................................................................................................................2412.0020200000000
..................................................................................................C-G---AAAATGCG--TTCC-CAATAAATGCA.................................................................................................................................................2512.0020200000000
...................................................AGGAGCAATGAACGTTT---------------ATGT............................................................................................................................................................................................2112.0020200000000
......................................................AGCAATGAACGTTT---------------ATGTCGT.........................................................................................................................................................................................2112.0020200000000
.............................................AATC--AGGAGCAATGAACGTT................................................................................................................................................................................................................2012.0020200000000
...................................................................................................................................................................TTTGTAGC---CGACAACTCAAGA........................................................................................2112.0020200000000
....TGACTACACATGCGACTCCCGCTTTGC....................................................................................................................................................................................................................................................2712.0020200000000
............................TGCGTACCCTG-AAGACAATC--AGGAGC..........................................................................................................................................................................................................................2612.0020200000000
.........................................................AATGAACGTTT---------------ATGTCGTAAC-AA-AC-G---...........................................................................................................................................................................2612.0020200000000
.......................................................................................................................................................AGCAATTAAATTTTTGTAGC---CGACA................................................................................................2511.0010100000000
................................................................GTTT---------------ATGTCGTAAC-AA-AC-G---A..........................................................................................................................................................................2011.0010100000000
........................................................CAATGAACGTTT---------------ATGTCGTAAC-AA-AC-...............................................................................................................................................................................2611.0010100000000
........................................................................................GTAAC-AA-AC-G---AAAATGCG--T................................................................................................................................................................1911.0010100000000
......................................................................................TCGTAAC-AA-AC-G---AAAATGCG--T................................................................................................................................................................2111.0010100000000
................................................................GTTT---------------ATGTCGTAAC-AA-AC-G---AA.........................................................................................................................................................................2111.0010100000000
...................CTCCCGCTTTGCGTACCCTG-A..........................................................................................................................................................................................................................................2111.0010100000000
......ACTACACATGCGACTCCCGC.........................................................................................................................................................................................................................................................2011.0010100000000
...............GCGACTCCCGCTTTGCGTACCCTG-A..........................................................................................................................................................................................................................................2511.0010100000000
...................CTCCCGCTTTGCGTACCCTG-AA.........................................................................................................................................................................................................................................2211.0010100000000
........................................AAGACAATC--AGGAGCAATGAACGT.................................................................................................................................................................................................................2411.0010000001000
..........................................................................................................................................................AATTAAATTTTTGTAGC---CGACAA...............................................................................................2311.0010100000000
......................................................................................................................................................AAGCAATTAAATTTTTGTAGC---.....................................................................................................2111.0010100000000
..............................CGTACCCTG-AAGACAATC--AG..............................................................................................................................................................................................................................2011.0010100000000
..........CACATGCGACTCCCGCTTTGCGTACC...............................................................................................................................................................................................................................................2611.0010100000000
......................................G-AAGACAATC--AGGAGCAATGAA....................................................................................................................................................................................................................2211.0010100000000
...................................................................T---------------ATGTCGTAAC-AA-AC-G---AAAATGC....................................................................................................................................................................2311.0010100000000
................................................................GTTT---------------ATGTCGTAAC-AA-AC-G---AAAATGCG--T................................................................................................................................................................2811.0010100000000
...................................................AGGAGCAATGAACGTTT---------------ATGTCGT.........................................................................................................................................................................................2411.0010100000000
............................................................GAACGTTT---------------ATGTCGTAAC-AA-AC-G---A..........................................................................................................................................................................2411.0010100000000
..........................................GACAATC--AGGAGCAATGAACG..................................................................................................................................................................................................................2111.0010100000000
....................................................GGAGCAATGAACGTTT---------------ATGTCG..........................................................................................................................................................................................2211.0010100000000
..........CACATGCGACTCCCGCTTTGCGT..................................................................................................................................................................................................................................................2311.0010100000000
....................................................................................................................CC-CAATAAATGCAATAATACAAA.......................................................................................................................................2311.0010100000000
.................GACTCCCGCTTTGCGTAC................................................................................................................................................................................................................................................1811.0010100000000
.........................................................AATGAACGTTT---------------ATGTCGTA........................................................................................................................................................................................1911.0010100000000
.................GACTCCCGCTTTGCGTACCCTG-AAGAC......................................................................................................................................................................................................................................2711.0010100000000
......................................................AGCAATGAACGTTT---------------ATGTCGTAAC-.....................................................................................................................................................................................2411.0010100000000
...............................................................................................................G--TTCC-CAATAAATGCAATA..............................................................................................................................................1911.0010100000000
..........................................GACAATC--AGGAGCAATGAAC...................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................AAATGCG--TTCC-CAATAAATG...................................................................................................................................................2011.0010100000000
...............GCGACTCCCGCTTTGCGTACC...............................................................................................................................................................................................................................................2111.0010100000000
........................................AAGACAATC--AGGAGCAATGAACG..................................................................................................................................................................................................................2311.0010100000000
.......CTACACATGCGACTCCCGCT........................................................................................................................................................................................................................................................2011.0010100000000
....................................................GGAGCAATGAACGTTT---------------ATGTCGTA........................................................................................................................................................................................2411.0010100000000
....................................CTG-AAGACAATC--AGGAGCAATGAACGT.................................................................................................................................................................................................................2711.0010100000000
........................................................CAATGAACGTTT---------------ATGTCGTAAC-AA-AC-G---...........................................................................................................................................................................2711.0010100000000
.........................................................................................TAAC-AA-AC-G---AAAATGCG--T................................................................................................................................................................1811.0010100000000
...........ACATGCGACTCCCGCTTTGCG...................................................................................................................................................................................................................................................2111.0010100000000
..........CACATGCGACTCCCGCTTTG.....................................................................................................................................................................................................................................................2011.0010100000000
..............................................ATC--AGGAGCAATGAACGT.................................................................................................................................................................................................................1811.0010100000000
.................................................................................................AC-G---AAAATGCG--TTCC-CAATA.......................................................................................................................................................2011.0010100000000
.........ACACATGCGACTCCCGCTTT......................................................................................................................................................................................................................................................2011.0010100000000
.........................CTTTGCGTACCCTG-AAGACAATC--AGG.............................................................................................................................................................................................................................2611.0010100000000
..............TGCGACTCCCGCTTTGCGT..................................................................................................................................................................................................................................................1911.0010100000000
..........................................................ATGAACGTTT---------------ATGTCGTAAC-AA-AC-G---A..........................................................................................................................................................................2611.0010100000000
............................................................GAACGTTT---------------ATGTCGTAAC-AA-AC-G---...........................................................................................................................................................................2311.0010100000000
............................TGCGTACCCTG-AAGACAATC--AGG.............................................................................................................................................................................................................................2311.0010100000000
.............ATGCGACTCCCGCTTTGCGTACCCTG-A..........................................................................................................................................................................................................................................2711.0010100000000
..........................................GACAATC--AGGAGCAATGAACGT.................................................................................................................................................................................................................2211.0010100000000
...............................GTACCCTG-AAGACAATC--AGGAGC..........................................................................................................................................................................................................................2311.0010100000000
......................................................AGCAATGAACGTTT---------------ATGTCGTAAC-AA-AC-...............................................................................................................................................................................2811.0010100000000
................................................................................................................................................................ATTTTTGTAGC---CGACAACTCAAGA........................................................................................2411.0010100000000
.....GACTACACATGCGACTCCCG..........................................................................................................................................................................................................................................................2011.0010100000000
.........................................................AATGAACGTTT---------------ATGTCGTAAC-AA-A.................................................................................................................................................................................2411.0010100000000
..........................TTTGCGTACCCTG-AAGACAATC--AGGAGC..........................................................................................................................................................................................................................2811.0010100000000
...........................TTGCGTACCCTG-AAGACAAT...................................................................................................................................................................................................................................2011.0010100000000
..............................CGTACCCTG-AAGACAATC--AGGAGCAATG......................................................................................................................................................................................................................2811.0010100000000
.....................................TG-AAGACAATC--AGGAGCAAT.......................................................................................................................................................................................................................2011.0010100000000
.........................................................AATGAACGTTT---------------ATGTCGTAAC-A....................................................................................................................................................................................2211.0010100000000
..................................................................................................C-G---AAAATGCG--TTCC-CAATA.......................................................................................................................................................1911.0010100000000
....................................CTG-AAGACAATC--AGGAGCAATGA.....................................................................................................................................................................................................................2311.0010100000000
................................................................................................................................................................ATTTTTGTAGC---CGACAACTCAAGAGGT.....................................................................................2711.0010000001000
.......................................................................................CGTAAC-AA-AC-G---AAAATGCG--TT...............................................................................................................................................................2111.0010100000000
...............GCGACTCCCGCTTTGCGT..................................................................................................................................................................................................................................................1811.0010100000000
....................................................................................................G---AAAATGCG--TTCC-CAATAAATGCA.................................................................................................................................................2411.0010100000000
.............................GCGTACCCTG-AAGACAATC--AG..............................................................................................................................................................................................................................2111.0010100000000
......................................................AGCAATGAACGTTT---------------ATGTC...........................................................................................................................................................................................1911.0010100000000
.............................................................AACGTTT---------------ATGTCGTAAC-AA-AC-G---...........................................................................................................................................................................2211.0010100000000
..............................................................................................................CG--TTCC-CAATAAATGCAATAATACA.........................................................................................................................................2511.0010100000000
..........................TTTGCGTACCCTG-AAGACAAT...................................................................................................................................................................................................................................2111.0010100000000
................................................C--AGGAGCAATGAACGTTT---------------ATGTCGTAA.......................................................................................................................................................................................2711.0010000001000
........................................................CAATGAACGTTT---------------ATGTCGTAAC-A....................................................................................................................................................................................2311.0010100000000
..................................................................................................C-G---AAAATGCG--TTCC-CAATAAA.....................................................................................................................................................2111.0010100000000
........................................................................................................................................CAAAA-TACA-TTTAAGCAATTAA...................................................................................................................2211.0010100000000
....................................CTG-AAGACAATC--AGGAGCAAT.......................................................................................................................................................................................................................2111.0010100000000
...........................TTGCGTACCCTG-AAGACAATC--AGGAGC..........................................................................................................................................................................................................................2711.0010100000000
...............................................................CGTTT---------------ATGTCGTAAC-AA-AC-G---...........................................................................................................................................................................2011.0010100000000
.....................CCCGCTTTGCGTACCCTG-A..........................................................................................................................................................................................................................................1911.0010100000000
....................................................GGAGCAATGAACGTTT---------------ATGTC...........................................................................................................................................................................................2111.0010100000000
..............................CGTACCCTG-AAGACAATC--A...............................................................................................................................................................................................................................1911.0010100000000
...............................................................................................................G--TTCC-CAATAAATGCAATAATA...........................................................................................................................................2211.0010100000000
............................TGCGTACCCTG-AAGACAAT...................................................................................................................................................................................................................................1911.0010100000000
.........ACACATGCGACTCCCGCTTTGCGTACCCT.............................................................................................................................................................................................................................................2911.0010100000000
......ACTACACATGCGACTCCCGCTTTG.....................................................................................................................................................................................................................................................2411.0010100000000
.....................CCCGCTTTGCGTACCCTG-AAGACA.....................................................................................................................................................................................................................................2411.0010100000000
..........................................GACAATC--AGGAGCAATGAACGTTT---------------................................................................................................................................................................................................2411.0010100000000
.............ATGCGACTCCCGCTTTGCGTACCCTG-...........................................................................................................................................................................................................................................2611.0010100000000
............CATGCGACTCCCGCTTTGCGTAC................................................................................................................................................................................................................................................2311.0010100000000
.............ATGCGACTCCCGCTTTGCGT..................................................................................................................................................................................................................................................2011.0010100000000
...............................................................CGTTT---------------ATGTCGTAAC-AA-AC-...............................................................................................................................................................................1911.0010100000000
............................................................................................................TGCG--TTCC-CAATAAATGCAATAATACAAA.......................................................................................................................................2911.0010100000000
...................................................................................ATGTCGTAAC-AA-AC-G---AAAATGCG--TT...............................................................................................................................................................2511.0010100000000
..........CACATGCGACTCCCGCTT.......................................................................................................................................................................................................................................................1811.0010100000000
........................................................................................................................................................................................................................................TAAGAAGTGCAATGAGCTACC......................2111.0010100000000
...................................................................................ATGTCGTAAC-AA-AC-G---AAAATGCG--T................................................................................................................................................................2411.0010100000000
..........CACATGCGACTCCCGCTTTGCGTACCCTG-...........................................................................................................................................................................................................................................2911.0010100000000
..............................CGTACCCTG-AAGACAATC--AGGA............................................................................................................................................................................................................................2211.0010100000000
....................................................................................TGTCGTAAC-AA-AC-G---AAAATGCG--TTCC-C...........................................................................................................................................................2711.0010100000000
..........................................................................................AAC-AA-AC-G---AAAATGCG--TTCC-CAATAA......................................................................................................................................................2611.0010100000000
................................................C--AGGAGCAATGAACGTTT---------------ATG.............................................................................................................................................................................................2111.0010100000000
...................................................................................................................TCC-CAATAAATGCAATAATACAA........................................................................................................................................2311.0010100000000
.......................................................GCAATGAACGTTT---------------ATGTCGTAAC-.....................................................................................................................................................................................2311.0010100000000
.........................................................................................................AAATGCG--TTCC-CAATAAATGC..................................................................................................................................................2111.0010100000000
........................................................................................................AAAATGCG--TTCC-CAATAAATGCA.................................................................................................................................................2311.0010100000000
.............................GCGTACCCTG-AAGACAATC--AGGAGC..........................................................................................................................................................................................................................2511.0010100000000
........TACACATGCGACTCCCGCTTTGCGT..................................................................................................................................................................................................................................................2511.0010000001000
.....................................TG-AAGACAATC--AGGAGCAATGAAC...................................................................................................................................................................................................................2411.0010100000000
......................................................................................................................................................AAGCAATTAAATTTTTGTAGC---CGACA................................................................................................2611.0010100000000
...................................................AGGAGCAATGAACGTTT---------------ATGTC...........................................................................................................................................................................................2211.0011000000000
.................GACTCCCGCTTTGCGTACCCTG-AAG........................................................................................................................................................................................................................................2511.0010100000000
.............................................AATC--AGGAGCAATGAACGTTT---------------ATGT............................................................................................................................................................................................2511.0010000001000
................CGACTCCCGCTTTGCGTACCCTG-A..........................................................................................................................................................................................................................................2411.0010100000000
droPer2
AAT---------------------------------------------------------------------------------------------------------------------------------------------AATACAAAACAATTATATTTTTGTAGC---CGACAACTCAAGAGGTTTCCCCTTATAGATAACGGGTTTCACACAAAAAGA--TCTGATAAGAAGTGCAATGAGCTACCT-ATAGCGTTACTTATAAATA-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ATTGTGATTATGTATGCGATTATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
ATTGTGATTATGTATGCGAT...............................................................................................................................................................................................................................................................2015.00501400
ATTGTGATTATGTATGCGATT..............................................................................................................................................................................................................................................................2112.00200200
.TTGTGATTATGTATGCGATT..............................................................................................................................................................................................................................................................2011.00101000
.TTGTGATTATGTATGCGATTATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2311.00101000
.TTGTGATTATGTATGCGAT...............................................................................................................................................................................................................................................................1911.00100100
.....GATTATGTATGCGATTATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1911.00101000
droVir3
GATGCGACTACGAATGCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
GATGTGACTATGAATGTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/17/2015 at 11:11 PM