ID:

dya_738

 Coordinate:

3L:8358308-8358458 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.4 -5.4 -5.4

Flybase annnotation

exon [dyak_GLEANR_4230:6]; CDS [Dyak\GE20389-cds]; intron [Dyak\GE20389-in]

Repeatable elements

NameClassFamilyStrand
(CTG)nSimple_repeatSimple_repeat+
mature
  1. dya_738  3L:8358329-8358353 -
  2. 3L:8479784-8479808 +
  3. 3L:14107904-14107928 -
  4. 3L:15396531-15396555 +
  5. 3L:23876376-23876400 -
  6. 2R:17504475-17504499 -
  7. 2R:18746455-18746479 +
  8. X:17757253-17757277 -
  9. 3R:8818006-8818030 +
  10. v2_chrUn_1458:366-390 +
  11. v2_chr2h_random_021:67478-67502 +
  12. v2_chr2h_random_021:67526-67550 +
star
  1. dya_723  3L:6409493-6409511 -
  2. dya_723  3L:6409544-6409562 -
  3. dya_738  3L:8358366-8358384 -
  4. 3L:11323025-11323043 -
  5. 3L:19304179-19304197 -
  6. 2L:2082113-2082131 -
  7. 2L:2082179-2082197 -
  8. 2L:2131082-2131100 -
  9. 2L:3409132-3409150 -
  10. 2L:10641064-10641082 -
  11. 2R:2942736-2942754 -
  12. 2R:7274339-7274357 -
  13. 2R:13150369-13150387 -
  14. 2R:20188618-20188636 -
  15. X:6889686-6889704 -
  16. dya_1393  X:11312649-11312667 -
  17. X:17197273-17197291 -
  18. 3R:21095832-21095850 -
  19. 3R:23263820-23263838 -
  20. 3R:27629113-27629131 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAAACGCAGAGCGAGGACAACAAGATGATGCACACTTCCAACAGCAATCTGGTGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAGCAGCAGCAACAACAGCAGCAGCAACAACAACAGCAGCAGCAGCAAATCCTGCAGCAGCAGCAGCAACAGCAATCAAACAACTTTTTCAGTTCGAATCCCTTTCT
****************************************************************************************************************************.......((.((.((.......((....)).......)).)).))...........*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V120
male body		 M056
embryo
.......................GATCAACTTTCACATGGGCAT............................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0
..........................CAACTTTCACATGGGCATCAGC........................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0
.................................................................................................................................................................................................TCCTGCAGCAGCAGCAGCAACA.................................... 22 0 2 0.50 1 1 0 0
...........................................................................................................................................................................................AGCAAATCCTGCAGCAGCA............................................. 19 0 2 0.50 1 1 0 0
...........................................................................................................................................................ACAACAGCAGCAGCAACAACAACAG....................................................................... 25 0 13 0.08 1 1 0 0
..........................................................................................................................................................AACAACAGAAGCAGCAACAACAACAGCA..................................................................... 28 1 13 0.08 1 1 0 0
...........................................................................................................................................................ACAACAGCAGCAGCAACAACAACAGC...................................................................... 26 0 13 0.08 1 0 0 1
..........................................................................................................................................................AACAACAGCAGCAGCAACAACAACAG....................................................................... 26 0 13 0.08 1 1 0 0
....................................................................................................................................................................GCAGCAACAACAACAGCAGCAGCAGC............................................................. 26 0 17 0.06 1 1 0 0
...............AGTCCGACGATCAACTTAC......................................................................................................................................................................................................................... 19 3 19 0.05 1 1 0 0
............................................................................................................................AGCAACAGCAGCAGCAACA............................................................................................................ 19 0 20 0.05 1 1 0 0
.......................................................................................................................GCAGCAGCAACAGCAGCAGCAACGAC.......................................................................................................... 26 1 20 0.05 1 1 0 0
...............................................................................................................................AACAGCAGCAGCAACAACAGCAGC.................................................................................................... 24 0 20 0.05 1 1 0 0
....................................................................................................................................................................GCATCAACAACAACAGCAGCAG................................................................. 22 1 20 0.05 1 1 0 0
..............................................................................................................................................AACAGCAGCAGCAACAACAGCAGCA.................................................................................... 25 0 20 0.05 1 1 0 0
.............................................................................................................................................................AACAGCAGCAGCAACAACAACAGCA..................................................................... 25 0 20 0.05 1 1 0 0
...............................................................................................................................AACAGCAGCAGCAACAACAGCAGCA................................................................................................... 25 0 20 0.05 1 1 0 0
............................................................................................................................................................CAACAGCAGCAGCAACAACAACAGCA..................................................................... 26 0 20 0.05 1 1 0 0
.....................................................................................................................................................GCAGCAACAACAGCAGCAGCAACA.............................................................................. 24 0 20 0.05 1 1 0 0
..............................................................................................................................................AACAGCAGCAGCAACAACAGCAGC..................................................................................... 24 0 20 0.05 1 1 0 0
......................................................................................................................................GCAGCAACAACAGCAGCAGC................................................................................................. 20 0 20 0.05 1 0 0 1

Anti-sense strand reads

TACCGGTGGCTTAGCTCAGGAAGCTAGTTGAAAGTGTACCCGTAGTCGCTACTACCGAGGCTTTGCGTCTCGCTCCTGTTGTTCTACTACGTGTGAAGGTTGTCGTTAGACCACGTCGTCGTCGTCGTTGTCGTCGTCGTTGTTGTCGTCGTCGTTGTTGTCGTCGTCGTTGTTGTTGTCGTCGTCGTCGTTTAGGACGTCGTCGTCGTCGTTGTCGTTAGTTTGTTGAAAAAGTCAAGCTTAGGGAAAGA
***********************************************************************.......((.((.((.......((....)).......)).)).))...........**************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V052
head
 M056
embryo
 M043
female body
 V046
embryo
..........................................................................CCTCGTGTCCTACTACGTGTGA........................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0
.......................CTGGATGAGAGTGTACCC.................................................................................................................................................................................................................. 18 3 20 0.15 3 1 2 0 0
...........................................................................................................................................TTGTTGTCGTCGTCGTTGTT............................................................................................ 20 0 20 0.05 1 0 1 0 0
.........................................................................................................................................................GTTGTTGTCGTCGTCGTT................................................................................ 18 0 20 0.05 1 0 0 0 1
..................................................................................................................................................................GTCGTCGTTGTTGTTGTCGTCGT.................................................................. 23 0 20 0.05 1 0 0 1 0
..........................................................................................................................................GTTGTTGTCGTCGTCGTT............................................................................................... 18 0 20 0.05 1 0 0 0 1
....................................................................................................................CGTCGTCGTCGTTGTCGGCGTCGTTG............................................................................................................. 26 1 20 0.05 1 0 0 1 0
...........................................................................................................................................................AGTTGTCGTCGTCGTTGTTGTTGT........................................................................ 24 1 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3L:8358258-8358508 - dya_738 ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAAACGCAGAGCGAGGACAACAAGATGATGCACACTTCCA---ACAGCAATCT---GGTGCAGCAGCAGCA---G------------CAACAGCA------------------------------GCAGCAA------CAACAG------CAGCAGCAACAACAGCA------GCAGCAACAACAACAGC---------------------------------------AGCAGCAGCAAATCCTGCAGCAGCAGCAGCAACAGCAATCAAACAACTTTTTCAGTTCGAATCCCTTTCT---
droEre2 scaffold_4784:3587014-3587240 + ATGGCCACCGAATCGAGTCCTTCAATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAGTCGCAGGGCGAGGATAACAAGATGATGCACAGTTCCA---GCAGCAATCT---GGTGCAGCAGCAACA---G------------------CA------------------------------GCAGCAG------CAACAACAACAGCAGCAGCAGCAAC---------------------AGCAGC---------------------------------------AGCAGCAGCAAATCCTGCAGCA------GC---AGCAGTCAAACAACTTCTTCAGTTCGAATCCCTTTCT---
droSec2 scaffold_0:71091-71290 - ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAAACGCAGAGCGAGGACAACAAGATGATGCACACTTCCG---GCAGCAATCT---GGTGCAGCAGCAACA---G------------------CA------------------------------GCAGCAA------CA---------------------------------------------------------------------------------------------ACAACAAATCCTGCAGCAGCATCAAC---AGCAGTCAAACAGCTTCTTCAGTTCGAATCCCTTTCT---
droSim2 3l:7595617-7595816 - ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAAACGCAGAGCGAGGACAACAAGATGATGCACACTTCCG---GCAGCAATCT---GGTGCAGCAGCAACA---G------------------CA------------------------------GCAGCAA------CA---------------------------------------------------------------------------------------------ACAACAAATCCTGCAGCAGCATCAGC---AGCAGTCAAACAGCTTCTTCAGTTCGAATCCCTTTCT---
dm3 chr3L:7757440-7757642 - ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAAACGCAGAGCGAGGACAACAAGATGATGCACACTTCCG---GCAGCAATCT---GGTGCAGCAGCAACA---G------------------CA------------------------------GCAGCAG------CAAC------------------------------------------------------------------------------------------AACAACAAATCCTGCAGCAGCATCAAC---AGCAGTCAAATAGCTTCTTCAGTTCGAATCCCTTTCT---
droEug1 scf7180000409524:879862-880091 + ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATTAGCGATGATGGCTCTGAAACGCAGAGTGATGACAACAAGATGATGCACAGTTCCA---GCAGCAATCA---AATGCAGCAGCAACA---A------------------CA------------------------------GCAGCAA------CAGCAA------------------C---------------------AGC------ATCAGC---AGC------------------AGCAACATCAACAGCACATCCTGCAGCAACATCAAC---CACAGTCAAACAGTTTCTTCAGTGCGAATCCCTTTCTCAG
droBia1 scf7180000302428:89246-89445 - ATGGCCACCGAGTCGAGTCCCTCGATCAACTTTCACATGGGCATCAGCGACGATGGCTCCGAAACGCAGAGCGAGGACAACAAAATGATGCACACTTCCG---GGGGCAACCA---GTTGCAGCAACACCA---G------------------CA------------------------------GCAG------------------------------------------------------------------------------------------------------CAGCAGCAGATCCTGCAGCAACACCAGC---AGCAGTCGAACAACTTCTTCAGTGCGAATCCCTTTCTCAG
droTak1 scf7180000415352:88300-88520 - ATGGCCACCGAATCGAGTCCCTCGATCAACTTTCACATGGGCATCAGTGACGATGGTTCCGAGACGCAGAGCGAGGACAACAAGATGATGCATACCTCCAGCAGCAGCAATCA---GTTGCAGCAGCAACA---T------------------CA------------------------------GCAGCAG------CAGCAA------------------C---------------------AGCAGC---------------------------------------AGCAGCAGCAACTCCTGCAGCAGCATCAAC---AGCAGTCAAACAACTTCTTCAGTTCGAATCCCTTTCTCAA
droEle1 scf7180000491193:3035933-3036201 - ATGGCCACCGAATCGAGTCCCTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAATCGCAGAGCGAGGACAACAAAATGATGCACAGTTCCA---GCAGCACGCA---AATGCAGCAGCAGCAGCAG------------CAACAGCAACAGCAGCAACAACA---------------GCAGCAA------CAGCAG---------------CAAC---------------------AGCAGC------------AACAG---CAGCAACAGCAGCAGCAACAGCAGCAGCAAATCCTGCACCAGCATCAAC---AGCAGTCAAACAACTTTTTCTGTGCGAATCCTTTTCTTAG
droRho1 scf7180000778084:5500-5717 - ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAAACGCAGAGCGAGGACAACAAGATGATGCACAGTTCCA---GCACCACGCA---AATGCAGCAGCAGCA---A------------------CA------------------------------GCAGCAG------CAACAGC---------------------------------------AACATC---------------------------------------AGCAGCAGCAAATCCTGCAGCAACATCAAC---AGCAGTCAAACAATTTCTTCAGCGCGAATCCCTTCCTCAG
droFic1 scf7180000454065:89176-89405 - ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGACGATGGCTCCGAGACCCAGAGCGAGGACAACAAGATGATGCACAGCTCCA---GCAGCAATCA---AATGCAACAGCAACA---G------------------CA------------------------------GCAGCAG------CAACAT------CAGCAAC------------------------------------ATCAGC------------------------AGCAGCAGCAGCAGCAAATCCTGCAGCAACACCAGC---AGCAGTCAAACAACTTCTTCAGTGCGAATCCCTTTCTCAG
droKik1 scf7180000302274:86396-86622 - ATGGCCACCGAATCGAGTCCCTCCCTCAACTTTCACATGGGCATTAGCGACGATGGCTCGGAGACCCAGAGCGAAGACAACAAAATGATGCACAGCTCCA---GCAGCAGTCA---GTTGCAGCAGCAACA---T------------------CA------------------------------GCAGCAG------CAACAGCAC------CAGCAGCAAATGAT---------------------------------------GCAGC------------------A------ACACCAGCAGCAGCAGCAGCAAC---AGCAGTCAAACAACTTCTTCAGTTCGAATCCCTTTCTCAG
droAna3 scaffold_13337:10557390-10557601 - ATGGCCACAGAATCGAGTCCTTCGCTCAACTTCCATATGGGCATCAGTGACGATGGCTCGGAGACTCACAGTGAAGACAACAAGCTGATGCACAGCAACA---GCAGCAATCA---GATGCAGCAACATCA---G------------------CA------------------------------GCAGCAG------CAGC------------------AAATGAT---------------------------------------GCAGC------------------A------ACAACAGCAGCAGCAACAGCAAC---AGCAGTCCAATAACTTCTTTAGCTCCAATCACTTTCT---
droBip1 scf7180000396569:812334-812557 + ATGGCCACGGAGTCGAGTCCTTCGCTGAACTTCCACATGGGCATCAGTGACGACGGCTCGGAGACTCACAGCGAAGACAACAAGCTGATGCACAGCAACA---GCAGCAATCA---GATGCAGCAGCAACA---C------------------CA------------------------------GCAACAAATGATGCAGCAA------------------C---------------------AGCAGCAGCACCAGC---A---------------------------------ACAGCAGCAACAACAGCAGCAAC---AGCAGTCCAACAACTTCTTCAGCTCCAATCACTTTCT---
dp5 XR_group8:1733699-1733919 + ATGGCCAC------AAGCCCTTCGGTCAACTTCCACATGGGCATCAGTGACGAT---TCCGAGACGCAGAGTGAAGACAAAATGAGGATGGGCAGCAGCA---GTAGCCATCTGCAGCTGCAGCAGCAACA---T------------------CT------------------------------CCTGCAG------CAACAGCAA---------------C---------------------AGC------AGCAGCAGCAACAGCAGC------------------A---ACAACA---ACACCAGCAACAGCTAC---CAGAGTCGAGCAGTTTTTACCATTCGAATCCATTCGT---
droPer2 scaffold_24:1316535-1316740 - ATGGCCAC------AAGCCCTTCGGTCAACTTCCACATGGGCATCAGTGATGAT---TCCGAGACGCAGAGTGAAGACAAGATGAGGATGGGCAGCAGCA---GTAGCCACCTGCAGCTGCAGCAGCAACA---T------------------CT------------------------------CCTGCAG------CAACAGC---------------AAC---------------------AGCAGC---------------------------------------AACAACAACAA------CACCAGCAGCTAC---CAGAGTCGAGCAGTTTTTACCATTCGAATCCATTCGT---
droWil2 scf2_1100000002615:1646-1861 + ATCAACAGCAACACCAGCAGCAGGAACAGCAACAACAGCAGCAGCAACAACAACAACAGCAGCAGCAACAATATCAACAGCAACAGCAACAACAGCAGCA----------------GGAACAGCAACAACA---G------------------CA------------------------------GCAGCAA------CAATATCA---------------ACAGCA------ACAGCAACAACAGCAGC------------AGC------------------------AACAGCAACAACAGCAGCAGCAGCAGCAAC---AGC-----AACAACAACAACTGCTCGAATACC--------
droVir3 scaffold_13049:20554702-20554912 - CTGGCCACCGAATCGAGTCCTTCGCTCAACTTTCCCATGGGCATGAGCGATGACGGCTCCGAGACGCACAGCGAGGACAACCAGATGATGCACAGCACCG---C---------------GCATCAGCAACA---TCTACTGCAGCAACAGCAACA------------------------------GC------------------------------------------------------------------AGCAGC---AGCAG---C------------------AGCAACAGCAACTGTTGCAGCC------GC---AGCAGACGAGCAGCTTTTTCGCCACGAATCCTTTCCA-GT
droMoj3 scaffold_6680:8260794-8261041 - ATGGCCACCGAGTCGGGCGCCTCGCTCAACTTTCACATGGGCATCAGCGACGACGGCTCCGAGACGCACAGCGAGGACAATAAGTTGATGCGCAGCACCA---GCAGCAATCA---G---CAGCAGCAACA---G------------------CA------------------------------GCAACAG------CAACAG------CAGCAGCAGCAACTGTT------GCAGCCGCAACCTGTAGT-----------GGC-------------------GCAGCAACTGTTGCAGACGCAACAGCAGCAGCAAC---AACAACAAAGCAACTTCTTTGCTGCAAATCCCTTTGG---
droGri2 scaffold_15110:11956611-11956893 + ATGACCACCGAGTCGAGTCCTTCGCTCAACTTCCACATGGGCATCAGTGACGACGGCAGCGAGACGCACAGCGAGGACAACAAAATGATGCACTCATCCA---AGAGTCAACT---GCATCAACAGCAGCA---A------------CAGCAACAGCAGCAGCAACAGCAACAGCAACAACAGCACCAGCAG------CATAATCA------------GCAAGTATTGCAACAGCAGCAGCAACATCAGC---------------------------------------AACAGCAGCAATTGTTGCAACAATCGCACCAGCATCAATCGAACAGCTATTTCGGCTCGAATCCATTTCA-AT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAAACGCAGAGCGAGGACAACAAGATGATGCACACTTCCA---ACAGCAATCT---GGTGCAGCAGCAGCA---G------------CAACAGCA------------------------------GCAGCAA------CAACAG------CAGCAGCAACAACAGCA------GCAGCAACAACAACAGC---------------------------------------AGCAGCAGCAAATCCTGCAGCAGCAGCAGCAACAGCAATCAAACAACTTTTTCAGTTCGAATCCCTTTCT---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................GATCAACTTTCACATGGGCAT..............................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........................CAACTTTCACATGGGCATCAGC..........................................................................................................................................................................................................................................................................................................................2211.00101000000000
.............................................................................................................................................................................................................................................................................................................TCCTGCAGCAGCAGCAGCAACA.......................................2220.50101000000000
.......................................................................................................................................................................................................................................................................................................AGCAAATCCTGCAGCAGCA................................................1920.50101000000000
..........................................................................................................................................................................................................................ACAACAGCA------GCAGCAACAACAACAG.................................................................................................................25130.08101000000000
..........................................................................................................................................................................................................................ACAACAGCA------GCAGCAACAACAACAGC---------------------------------------.........................................................................26130.08100100000000
.........................................................................................................................................................................................................................AACAACAGCA------GCAGCAACAACAACAG.................................................................................................................26130.08101000000000
.........................................................................................................................................................................................................................................GCAGCAACAACAACAGC---------------------------------------AGCAGCAGC................................................................26170.06101000000000
..................................................................................................................................A---G------------CAACAGCA------------------------------GCAGCAA------CA..................................................................................................................................................................19200.05101000000000
....................................................................................................................................................AACAGCA------------------------------GCAGCAA------CAACAG------CAGC....................................................................................................................................................24200.05101000000000
.......................................................................................................................................................................................................AACAG------CAGCAGCAACAACAGCA------GCA..............................................................................................................................25200.05101000000000
............................................................................................................................................................................................................................AACAGCA------GCAGCAACAACAACAGC---------------------------------------A........................................................................25200.05101000000000
....................................................................................................................................................AACAGCA------------------------------GCAGCAA------CAACAG------CAGCA...................................................................................................................................................25200.05101000000000
...........................................................................................................................................................................................................................CAACAGCA------GCAGCAACAACAACAGC---------------------------------------A........................................................................26200.05101000000000
....................................................................................................................................................................................................................GCAGCAACAACAGCA------GCAGCAACA........................................................................................................................24200.05101000000000
.......................................................................................................................................................................................................AACAG------CAGCAGCAACAACAGCA------GC...............................................................................................................................24200.05101000000000
.........................................................................................................................................................................................GCAGCAA------CAACAG------CAGCAGC.................................................................................................................................................20200.05100100000000
droEre2
ATGGCCACCGAATCGAGTCCTTCAATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAGTCGCAGGGCGAGGATAACAAGATGATGCACAGTTCCA---GCAGCAATCT---GGTGCAGCAGCAACA---G------------------CA------------------------------GCAGCAG------CAACAACAACAGCAGCAGCAGCAAC---------------------AGCAGC---------------------------------------AGCAGCAGCAAATCCTGCAGCA------GC---AGCAGTCAAACAACTTCTTCAGTTCGAATCCCTTTCT---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................ATGGGCATCAGCGATGATGGC.................................................................................................................................................................................................................................................................................................................2111.0010000010
..............................................................GTCGCAGGGCGAGGATAACAAGATGATG................................................................................................................................................................................................................................................................................2811.0010000100
..................CCTTCAATCAACTTTCACATGGGC................................................................................................................................................................................................................................................................................................................................2411.0010000010
........................................................................................................................................................................................................................................................................................................GCAAATCCTGCAGCA------GC---AGCAGT..................................2311.0010000100
...........................................................................................................................................................................................AGCAG------CAACAACAACAGCAGCAGCAGCA.............................................................................................................................................28130.771000000010
......................................................................................................................................................................................................................................................................................................CAGCAAATCCTGCAGCA------GC---........................................1920.5010100000
........................................................................................................................................................................................................................................................................................................GCAAATCCTGCAGCA------GC---AGC.....................................2020.5010100000
.......................................................................................................................................................................................................AACAACAACAGCAGCAGC.................................................................................................................................................18200.2040000040
............................................................................................................................................................................................................CAACAGCAGCAGCAGCAAC---------------------AGC...................................................................................................................22200.1020101000
..........................................................................................................................................................................................................AACAACAGCAGCAGCAGCAAC---------------------A.....................................................................................................................22200.1020000020
..............................................................................................................................................................................................AG------CAACAACAACAGCAGCAGC.................................................................................................................................................21200.1020002000
............................................................................................................................................................................................GCAG------CAACAACAACAGCAGCAGC.................................................................................................................................................23200.0510100000
............................................................................................................................................................................................................CAACAGCAGCAGCAGCAAC---------------------......................................................................................................................19200.0510000010
......................................................................................................................................................................................................CAACAACAACAGCAGCAGC.................................................................................................................................................19200.0510001000
.......................................................................................................................GCAGCAGCAACA---G------------------CA------------------------------GCAGCAG------C...................................................................................................................................................................23200.0510100000
.............................................................................................................................................................................................................AACAGCAGCAGCAGCAAC---------------------AGCAGC---------------------------------------.........................................................................24200.0510000010
.............................................................................................................................GCAACA---G------------------CA------------------------------GCAGCAG------CA..................................................................................................................................................................18200.0510000100
....................................................................................................................................................................................................................GCAGCAGCAAC---------------------AGCAGC---------------------------------------AGC......................................................................20200.0511000000
.............................................................................................................................................................................................CAG------CAACAACAACAGCAGCAGC.................................................................................................................................................22200.0510100000
.......................................................................................................................................................................................................AACAACAACAGCAGCAGCAGCAA............................................................................................................................................23200.0510000010
......................................................................................................................TGCAGCAGCAACA---G------------------CA------------------------------GCAGCAG------C...................................................................................................................................................................24200.0511000000
......................................................................................................................................................................................................CAACAACAACAGCAGCAGCAG...............................................................................................................................................21200.0510000010
...........................................................................................................................................................................................................ACAACAGCAGCAGCAGCAAC---------------------AGC...................................................................................................................23200.0511000000
....................................................................................................................................................................................................................GCAGCAGCAAC---------------------AGCAGC---------------------------------------AGCA.....................................................................21200.0510001000
..........................................................................................................................................................................................CAGCAG------CAACAACAACAGCAGCA...................................................................................................................................................23200.0510000100
.............................................................................................................................................................................................................AACAGCAGCAGCAGCAAC---------------------AGCAGC---------------------------------------A........................................................................25200.0510001000
droSec2
ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAAACGCAGAGCGAGGACAACAAGATGATGCACACTTCCG---GCAGCAATCT---GGTGCAGCAGCAACA---G------------------CA------------------------------GCAGCAA------CA---------------------------------------------------------------------------------------------ACAACAAATCCTGCAGCAGCATCAAC---AGCAGTCAAACAGCTTCTTCAGTTCGAATCCCTTTCT---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................CAGCAGCAACA---G------------------CA------------------------------GCAGCAA------CA---------------------------------------------------------------------------------------------A....................................................................24200.0510010
................................................................................................................................ACA---G------------------CA------------------------------GCAGCAA------CA---------------------------------------------------------------------------------------------ACAA.................................................................19200.0510010
droSim2
ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAAACGCAGAGCGAGGACAACAAGATGATGCACACTTCCG---GCAGCAATCT---GGTGCAGCAGCAACA---G------------------CA------------------------------GCAGCAA------CA---------------------------------------------------------------------------------------------ACAACAAATCCTGCAGCAGCATCAGC---AGCAGTCAAACAGCTTCTTCAGTTCGAATCCCTTTCT---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................CCTTCGATCAACTTTCACATGGGC................................................................................................................................................................................................................................................................................................................................2412.00202000000000000000
...........................................................................................................................................................................................................................................................................................................................................ACAGCTTCTTCAGTTCGAA............1911.00100001000000000000
...........................................................................................................CAATCT---GGTGCAGCAGCA..........................................................................................................................................................................................................................................1811.00100001000000000000
.................................................................................................................................................................................................................................................................................................................................................TCTTCAGTTCGAATA..........15200.05100000000100000000
dm3
ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAAACGCAGAGCGAGGACAACAAGATGATGCACACTTCCG---GCAGCAATCT---GGTGCAGCAGCAACA---G------------------CA------------------------------GCAGCAG------CAAC------------------------------------------------------------------------------------------AACAACAAATCCTGCAGCAGCATCAAC---AGCAGTCAAATAGCTTCTTCAGTTCGAATCCCTTTCT---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................CAAC---AGCAGTCAAATAGCT.........................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TCACATGGGCATCAGCGATGATGGC.................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GCAGAGCGAGGACAACAAGATGATGCAC.............................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................................................................................TCAAC---AGCAGTCAAATAGCTTCTTCAG..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAACTTTCACATGGGCATCAG...........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................................................................................CTTCAGTTCGAATCCCTTTCT---2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.............................................AGCGATGATGGCTCCGAAACGCAGAGCGA................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ACATGGGCATCAGCGATTC.....................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...................................CATGGGCATCAGCGATGATGG..................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CAGCAACA---G------------------CA------------------------------GCAGCAG------CA..................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................GTGCAGCAGCAACA---G------------------CA------------------------------GC...............................................................................................................................................................................19110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................GCAGCAACA---G------------------CA------------------------------GCAGCAG------CA..................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CAGCAGCAACA---G------------------CA------------------------------GCAGC............................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CAACA---G------------------CA------------------------------GCAGCAG------CAAC------------------------------------------------------------------------------------------AACAAC................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................A---G------------------CA------------------------------GCAGCAG------CAAC------------------------------------------------------------------------------------------AACA..................................................................19200.0510000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATTAGCGATGATGGCTCTGAAACGCAGAGTGATGACAACAAGATGATGCACAGTTCCA---GCAGCAATCA---AATGCAGCAGCAACA---A------------------CA------------------------------GCAGCAA------CAGCAA------------------C---------------------AGC------ATCAGC---AGC------------------AGCAACATCAACAGCACATCCTGCAGCAACATCAAC---CACAGTCAAACAGTTTCTTCAGTGCGAATCCCTTTCTCAGSizeHit CountTotal NormTotal
No Reads
droBia1
ATGGCCACCGAGTCGAGTCCCTCGATCAACTTTCACATGGGCATCAGCGACGATGGCTCCGAAACGCAGAGCGAGGACAACAAAATGATGCACACTTCCG---GGGGCAACCA---GTTGCAGCAACACCA---G------------------CA------------------------------GCAG------------------------------------------------------------------------------------------------------CAGCAGCAGATCCTGCAGCAACACCAGC---AGCAGTCGAACAACTTCTTCAGTGCGAATCCCTTTCTCAGSizeHit CountTotal NormTotal
No Reads
droTak1
ATGGCCACCGAATCGAGTCCCTCGATCAACTTTCACATGGGCATCAGTGACGATGGTTCCGAGACGCAGAGCGAGGACAACAAGATGATGCATACCTCCAGCAGCAGCAATCA---GTTGCAGCAGCAACA---T------------------CA------------------------------GCAGCAG------CAGCAA------------------C---------------------AGCAGC---------------------------------------AGCAGCAGCAACTCCTGCAGCAGCATCAAC---AGCAGTCAAACAACTTCTTCAGTTCGAATCCCTTTCTCAASizeHit CountTotal NormTotal
No Reads
droEle1
ATGGCCACCGAATCGAGTCCCTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAATCGCAGAGCGAGGACAACAAAATGATGCACAGTTCCA---GCAGCACGCA---AATGCAGCAGCAGCAGCAG------------CAACAGCAACAGCAGCAACAACA---------------GCAGCAA------CAGCAG---------------CAAC---------------------AGCAGC------------AACAG---CAGCAACAGCAGCAGCAACAGCAGCAGCAAATCCTGCACCAGCATCAAC---AGCAGTCAAACAACTTTTTCTGTGCGAATCCTTTTCTTAGSizeHit CountTotal NormTotal
No Reads
droRho1
ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAAACGCAGAGCGAGGACAACAAGATGATGCACAGTTCCA---GCACCACGCA---AATGCAGCAGCAGCA---A------------------CA------------------------------GCAGCAG------CAACAGC---------------------------------------AACATC---------------------------------------AGCAGCAGCAAATCCTGCAGCAACATCAAC---AGCAGTCAAACAATTTCTTCAGCGCGAATCCCTTCCTCAGSizeHit CountTotal NormTotal
No Reads
droFic1
ATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGACGATGGCTCCGAGACCCAGAGCGAGGACAACAAGATGATGCACAGCTCCA---GCAGCAATCA---AATGCAACAGCAACA---G------------------CA------------------------------GCAGCAG------CAACAT------CAGCAAC------------------------------------ATCAGC------------------------AGCAGCAGCAGCAGCAAATCCTGCAGCAACACCAGC---AGCAGTCAAACAACTTCTTCAGTGCGAATCCCTTTCTCAGSizeHit CountTotal NormTotal
No Reads
droKik1
ATGGCCACCGAATCGAGTCCCTCCCTCAACTTTCACATGGGCATTAGCGACGATGGCTCGGAGACCCAGAGCGAAGACAACAAAATGATGCACAGCTCCA---GCAGCAGTCA---GTTGCAGCAGCAACA---T------------------CA------------------------------GCAGCAG------CAACAGCAC------CAGCAGCAAATGAT---------------------------------------GCAGC------------------A------ACACCAGCAGCAGCAGCAGCAAC---AGCAGTCAAACAACTTCTTCAGTTCGAATCCCTTTCTCAGSizeHit CountTotal NormTotal
No Reads
droAna3
ATGGCCACAGAATCGAGTCCTTCGCTCAACTTCCATATGGGCATCAGTGACGATGGCTCGGAGACTCACAGTGAAGACAACAAGCTGATGCACAGCAACA---GCAGCAATCA---GATGCAGCAACATCA---G------------------CA------------------------------GCAGCAG------CAGC------------------AAATGAT---------------------------------------GCAGC------------------A------ACAACAGCAGCAGCAACAGCAAC---AGCAGTCCAATAACTTCTTTAGCTCCAATCACTTTCT---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................CAACTTCCATATGGGCATCAG...........................................................................................................................................................................................................................................................................................................................2111.001000010
....................................................ATGGCTCGGAGACTCACAGTG.................................................................................................................................................................................................................................................................................................2111.001000001
....CCACAGAATCGAGTCCTTCGC.................................................................................................................................................................................................................................................................................................................................................2111.001000001
................................................................CTCACAGTGAAGACAACAAGCT....................................................................................................................................................................................................................................................................................2211.001000010
...........................................TCAGTGACGATGGCTCGGAGA..........................................................................................................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAACAGC..............................................20200.255050000
..........................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAGCAAC---A.......................................22200.153100002
................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAAC---AGCAGT..................................2180.131001000
.........................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAACAGCAAC---........................................22200.102020000
.................................................................................................................................................................................................................................................................................................A------ACAACAGCAGCAGCAACAGCAAC---A.......................................25200.102000002
........................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAACAGCAAC---AGC.....................................26120.081010000
.......................................................................................................................GCAGCAACATCA---G------------------CA------------------------------GCAGCAG------C...................................................................................................................................................................23180.061010000
..........................................................................................................................GCAACATCA---G------------------CA------------------------------GCAGCAG------CA..................................................................................................................................................................21200.051000010
........................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAACAG...............................................19200.051000001
..............................................................................................................................................................................................................................................................................C------------------A------ACAACAGCAGCAGCAACAGCAAC---........................................25200.051010000
..........................................................................................................................GCAACATCA---G------------------CA------------------------------GCAGCAG------CAGC------------------..............................................................................................................................................23200.051000001
..........................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAGCAA............................................20200.051000001
..........................................................................................................................GCAACATCA---G------------------CA------------------------------GCAGCAG------CAG.................................................................................................................................................................22200.051000001
droBip1
ATGGCCACGGAGTCGAGTCCTTCGCTGAACTTCCACATGGGCATCAGTGACGACGGCTCGGAGACTCACAGCGAAGACAACAAGCTGATGCACAGCAACA---GCAGCAATCA---GATGCAGCAGCAACA---C------------------CA------------------------------GCAACAAATGATGCAGCAA------------------C---------------------AGCAGCAGCACCAGC---A---------------------------------ACAGCAGCAACAACAGCAGCAAC---AGCAGTCCAACAACTTCTTCAGCTCCAATCACTTTCT---SizeHit CountTotal NormTotal
No Reads
dp5
ATGGCCAC------AAGCCCTTCGGTCAACTTCCACATGGGCATCAGTGACGAT---TCCGAGACGCAGAGTGAAGACAAAATGAGGATGGGCAGCAGCA---GTAGCCATCTGCAGCTGCAGCAGCAACA---T------------------CT------------------------------CCTGCAG------CAACAGCAA---------------C---------------------AGC------AGCAGCAGCAACAGCAGC------------------A---ACAACA---ACACCAGCAACAGCTAC---CAGAGTCGAGCAGTTTTTACCATTCGAATCCATTCGT---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................AACAGCTAC---CAGAGTCGAGCAGTT.........................2411.0010100000000
..............................................GTGACGAT---TCCGAGACGCAGAGTGAA...............................................................................................................................................................................................................................................................................................2611.0010100000000
.....................................................................AGTGAAGACAAAATGAGGATG................................................................................................................................................................................................................................................................................2111.0010100000000
.TGGCCAC------AAGCCCTTCGGTC...............................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................TCCACATGGGCATCAGTGACGAT---TC...............................................................................................................................................................................................................................................................................................................2511.0010100000000
..........................................................................................................................................................................................................AGCAA---------------C---------------------AGC------AGCAGCAGCA...................................................................................................19200.1530300000000
..............................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGC------------------A---AC...................................................................20200.0510100000000
.......................................................................................................................................................................................................AACAGCAA---------------C---------------------AGC------AGCAGC.......................................................................................................18200.0510010000000
....................................................................................................................................................................................................................................................AGC------AGCAGCAGCAACAGCAGC------------------.........................................................................21200.0510100000000
............................................................................................................................................................................................................CAA---------------C---------------------AGC------AGCAGCAGCAACAGC..............................................................................................22200.0510100000000
..............................................................................................................................................................................................................................C---------------------AGC------AGCAGCAGCAACAGC..............................................................................................19200.0510000100000
............................................................................................................................................................................................GCAG------CAACAGCAA---------------C---------------------AGC------AGCAGCAGCA...................................................................................................27200.0510100000000
...........................................................................................................................................................................................................GCAA---------------C---------------------AGC------AGCAGCAGCAACAGCA.............................................................................................24200.0510100000000
............................................................................................................................................................................................................CAA---------------C---------------------AGC------AGCAGCAGCAACAG...............................................................................................21200.0510100000000
...............................................................................................................................................................................................................................................................CAGCAGCAACAGCAGC------------------A---ACA..................................................................20200.0510000010000
...........................................................................................................................................................................................................GCAA---------------C---------------------AGC------AGCAGCAGCAACAG...............................................................................................22200.0510100000000
..............................................................................................................................................................................................................A---------------C---------------------AGC------AGCAGCAGCAACAGCAGC------------------.........................................................................23200.0510100000000
droPer2
ATGGCCAC------AAGCCCTTCGGTCAACTTCCACATGGGCATCAGTGATGAT---TCCGAGACGCAGAGTGAAGACAAGATGAGGATGGGCAGCAGCA---GTAGCCACCTGCAGCTGCAGCAGCAACA---T------------------CT------------------------------CCTGCAG------CAACAGC---------------AAC---------------------AGCAGC---------------------------------------AACAACAACAA------CACCAGCAGCTAC---CAGAGTCGAGCAGTTTTTACCATTCGAATCCATTCGT---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ATCAACAGCAACACCAGCAGCAGGAACAGCAACAACAGCAGCAGCAACAACAACAACAGCAGCAGCAACAATATCAACAGCAACAGCAACAACAGCAGCA----------------GGAACAGCAACAACA---G------------------CA------------------------------GCAGCAA------CAATATCA---------------ACAGCA------ACAGCAACAACAGCAGC------------AGC------------------------AACAGCAACAACAGCAGCAGCAGCAGCAAC---AGC-----AACAACAACAACTGCTCGAATACC--------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.TCAACAGCAACACCAGCAGCAGGAAT...............................................................................................................................................................................................................................................................................................................................................2611.00100010
.TCAACAGCAACACCAGCAGCAGGAACA..............................................................................................................................................................................................................................................................................................................................................2711.00100010
.........................................................................................CAACAGCAGCA----------------GGAACAGCAACAAC........................................................................................................................................................................................................................................2530.67200020
.......................................................................................................................................................................................................AATATCA---------------ACAGCA------ACAGCAACAA.......................................................................................................................23200.6012012000
.....................................................................AATATCAACAGCAACAGCAACAA..............................................................................................................................................................................................................................................................................23200.6012012000
.....................................................................AATATCAACAGCAACAGCAACA...............................................................................................................................................................................................................................................................................22200.45909000
.......................................................................................................................................................................................................AATATCA---------------ACAGCA------ACAGCAACA........................................................................................................................22200.45909000
............ACCAGCAGCAGGAACAGC............................................................................................................................................................................................................................................................................................................................................1840.25100010
.......................................................................................................................................................................................................AATATCA---------------ACAGCA------ACAGCAACAAC......................................................................................................................24200.25505000
.....................................................................AATATCAACAGCAACAGCAACAACAGC..........................................................................................................................................................................................................................................................................27200.25505000
.......................................................................................................................................................................................................AATATCA---------------ACAGCA------ACAGCAACAACAGC...................................................................................................................27200.25505000
.............................................AACAACAACAACAGCAGCA..........................................................................................................................................................................................................................................................................................................19200.25500050
.......................................................................................AACAACAGCAGCA----------------GGAACAGCAACA..........................................................................................................................................................................................................................................2540.25101000
.....................................................................AATATCAACAGCAACAGCAACAAC.............................................................................................................................................................................................................................................................................24200.25505000
.......................................................................................................................................................................................................AATATCA---------------ACAGCA------ACAGCAACAACAG....................................................................................................................26200.20403010
.....................................................................AATATCAACAGCAACAGCAACAACAG...........................................................................................................................................................................................................................................................................26200.20403010
....................................................................................AGCAACAACAGCAGCA----------------GGAACAGCA.............................................................................................................................................................................................................................................2550.20101000
...............................................CAACAACAACAGCAGCAGCAACAAT..................................................................................................................................................................................................................................................................................................2560.17101000
............................................................................................................................................................................................................................................................................................................................AAC---AGC-----AACAACAACAACTGCTCGAA............2660.17101000
...............................................................................................................................................................................................................................AGCA------ACAGCAACAACAGCAGC------------AG..................................................................................................23200.15303000
......................................................................................................................................................................................................................................................................AGC------------------------AACAGCAACAACAGCAGCAG.....................................................23200.15303000
..............................................................................AGCAACAGCAACAACAGCAGCA----------------G.....................................................................................................................................................................................................................................................23200.15303000
.......................................................................................................................................................................................................AATATCA---------------ACAGCA------ACAGCAACAACA.....................................................................................................................25200.15303000
.....................................................................AATATCAACAGCAACAGCAACAACA............................................................................................................................................................................................................................................................................25200.15303000
................................................AACAACAACAGCAGCAGCAAC.....................................................................................................................................................................................................................................................................................................21200.15300030
..................................................................................ACAGCAACAACAGCAGCA----------------GG....................................................................................................................................................................................................................................................2080.13100010
.....................................................................AATATCAACAGCAACAGCAACAACAGCAG........................................................................................................................................................................................................................................................................29190.11202000
.......................................................................................................................................................................................................AATATCA---------------ACAGCA------ACAGCAACAACAGCAG.................................................................................................................29190.11202000
..........................CAGCAACAACAGCAGCAGC.............................................................................................................................................................................................................................................................................................................................19200.10200020
..................................................................................................................................................................................................................................................ACAGCAGC------------AGC------------------------AACAGCA..................................................................18200.10200020
........................................GCAGCAACAACAACAACAGC..............................................................................................................................................................................................................................................................................................................20200.10202000
.......................................................................................................................................................................................................AATATCA---------------ACAGCA------ACAGCAACAACAGCA..................................................................................................................28200.10202000
..............................................................................................................................................................................................AA------CAATATCA---------------ACAGCA------ACAGCAACA........................................................................................................................25200.10202000
.......................................................................................................................................................................................................AATATCA---------------ACAGCA------ACAGCAAC.........................................................................................................................21200.10202000
..........................................................................................................................................................................................................ATCA---------------ACAGCA------ACAGCAACAACAG....................................................................................................................23200.10202000
........................................................................................................................CAGCAACAACA---G------------------CA------------------------------GCAGC............................................................................................................................................................................19200.10200020
............................................CAACAACAACAACAGCAGCAGC........................................................................................................................................................................................................................................................................................................22200.10200200
..................................................................AACAATATCAACAGCAACAGCAACA...............................................................................................................................................................................................................................................................................25200.10202000
........................................................................ATCAACAGCAACAGCAACAACAGCA.........................................................................................................................................................................................................................................................................25200.10202000
.....................................................................AATATCAACAGCAACAGCAACAACAGCA.........................................................................................................................................................................................................................................................................28200.10202000
........................................................................ATCAACAGCAACAGCAACAACAG...........................................................................................................................................................................................................................................................................23200.10202000
...................................................................................................................................................................................................................................................................................................CAGCAACAACAGCAGCAGC....................................................19200.10200020
..........................................................................................................................................................................................................ATCA---------------ACAGCA------ACAGCAACAACAGCA..................................................................................................................25200.10202000
................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAAC---AGC-----AACAA...........................23200.10200020
...............AGCAGCAGGAACAGCAACA........................................................................................................................................................................................................................................................................................................................................19120.08100010
.............................................................................................AGCAGCA----------------GGAACAGCAACA..........................................................................................................................................................................................................................................19120.08100010
......................................................AACAGCAGCAGCAACAATATCAACAG..........................................................................................................................................................................................................................................................................................26160.06100010
...............................................................................................................................AACA---G------------------CA------------------------------GCAGCAA------CAATATCA---------------ACAG.........................................................................................................................................26160.06100010
.......................................................ACAGCAGCAGCAACAATATCAAC............................................................................................................................................................................................................................................................................................23170.06101000
................................................................................................................................ACA---G------------------CA------------------------------GCAGCAA------CAATATCA---------------AC...........................................................................................................................................23170.06101000
....................................................................................AGCAACAACAGCAGCA----------------GG....................................................................................................................................................................................................................................................18170.06100010
...........................................................CAGCAGCAACAATATCAACAGCAA.......................................................................................................................................................................................................................................................................................24180.06101000
..........................................................................................................................................................................................................ATCA---------------ACAGCA------ACAGCAACAACAGCAGC------------AG..................................................................................................29180.06101000
.........................................................................................................................................................CA------------------------------GCAGCAA------CAATATCA---------------ACAGCA------A................................................................................................................................24180.06101000
........................................................................ATCAACAGCAACAGCAACAACAGCAGCA----------------G.....................................................................................................................................................................................................................................................29180.06101000
............................................................AGCAGCAACAATATCAACAG..........................................................................................................................................................................................................................................................................................20190.05101000
.......................................................................TATCAACAGCAACAGCAACAACAGCAG........................................................................................................................................................................................................................................................................27190.05101000
.........................................................................................................................................................................................................TATCA---------------ACAGCA------ACAGCAACAACAGCAG.................................................................................................................27190.05101000
..........................................................................................................................................................A------------------------------GCAGCAA------CAATATCA---------------ACAG.........................................................................................................................................20190.05101000
........................AACAGCAACAACAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................22200.05100010
.................................AACAGCAGCAGCAACAACAAC....................................................................................................................................................................................................................................................................................................................21200.05100001
.......................................................................................................................ACAGCAACAACA---G------------------CA------------------------------GCA..............................................................................................................................................................................18200.05100010
.....................................................................................................................................................................................................................................................................................................GCAACAACAGCAGCAGCAGCAGC..............................................23200.05110000
.........................................CAGCAACAACAACAACAGCAGCA..........................................................................................................................................................................................................................................................................................................23200.05101000
............................................CAACAACAACAACAGCAGCAGCAA......................................................................................................................................................................................................................................................................................................24200.05100100
................................................................................CAACAGCAACAACAGCAGCA----------------G.....................................................................................................................................................................................................................................................21200.05100010
........................................................................ATCAACAGCAACAGCAACAACA............................................................................................................................................................................................................................................................................22200.05101000
.............................................................................................................................................................................................................A---------------ACAGCA------ACAGCAACAACAGCA..................................................................................................................22200.05100001
....................................................................................................................................................................................................................................................AGCAGC------------AGC------------------------AACAGCAACAACAGC..........................................................24200.05100010
.............................................................................................................................................................................................................................................CAACAACAGCAGC------------AGC------------------------AACAG....................................................................21200.05101000
......................................................................................................................................................................................................................................................CAGC------------AGC------------------------AACAGCAACAACAG...........................................................21200.05101000
...................................................................................................................................................................................................................................................................................................CAGCAACAACAGCAGCAGCAGCAGCA.............................................26200.05100010
..............................................................................AGCAACAGCAACAACAGCAGCA----------------......................................................................................................................................................................................................................................................22200.05101000
........................................................................................................................................................................................................................................................................C------------------------AACAGCAACAACAGCAGCAGCAGCAG...............................................27200.05101000
........................................GCAGCAACAACAACAACAGCAGC...........................................................................................................................................................................................................................................................................................................23200.05101000
...............................................................................................................................................................................................................................AGCA------ACAGCAACAACAGCAGC------------AGC------------------------AAA......................................................................27200.05101000
................................................AACAACAACAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................19200.05100001
.....................................GCAGCAGCAACAACAACAACAGC..............................................................................................................................................................................................................................................................................................................23200.05101000
....................................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAGCAGC.................................................21200.05100001
........................................................................................................................................................................................................ATATCA---------------ACAGCA------ACAGCAACAAC......................................................................................................................23200.05101000
................................................................................................................................................................................................................................................CAACAGCAGC------------AGC------------------------AACAGC...................................................................19200.05101000
..........................................................................................................................................................................................CAGCAA------CAATATCA---------------ACAGCA------ACAGC............................................................................................................................25200.05100010
..................................................................AACAATATCAACAGCAACAGCAA.................................................................................................................................................................................................................................................................................23200.05100010
.........................................................................................................................................................................................................TATCA---------------ACAGCA------ACAGCAACAACAGC...................................................................................................................25200.05101000
.................................................................................................................................................................................................................................CA------ACAGCAACAACAGCAGC------------AG..................................................................................................21200.05100010
.................................................................................................................................................................................................................................................................................................AACAGCAACAACAGCAGCAGCA...................................................22200.05100010
........................................................................................................................................................................................................ATATCA---------------ACAGCA------ACAGCAACAACAGC...................................................................................................................26200.05101000
................................CAACAGCAGCAGCAACAACAACAAC.................................................................................................................................................................................................................................................................................................................25200.05100010
.......................................................................TATCAACAGCAACAGCAACAACA............................................................................................................................................................................................................................................................................23200.05101000
...............................................CAACAACAACAGCAGCAGCAACAA...................................................................................................................................................................................................................................................................................................24200.05100010
......................................................................................................................................................................................................................................................................AGC------------------------AACAGCAACAACAGCAGC.......................................................21200.05100010
............................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAAC---A.......................................20200.05100001
..................................................................AACAATATCAACAGCAACAGCAACAA..............................................................................................................................................................................................................................................................................26200.05101000
............................................................................................................................................................................................................CA---------------ACAGCA------ACAGCAACAACAGCAGC------------AGC------------------------A........................................................................29200.05100100
.................................................................CAACAATATCAACAGCAACAGCAA.................................................................................................................................................................................................................................................................................24200.05101000
..............................................................................................................................................................................................................................................AACAACAGCAGC------------AGC------------------------AACAGCA..................................................................22200.05100010
..................................................................................................................................................................................................................................................ACAGCAGC------------AGC------------------------AACAGCAAC................................................................20200.05100010
.......................................................................................................................................................................................................AATATCA---------------ACAGCA------ACAGCAACAACAGTT..................................................................................................................28200.05101000
.......................................................................................................................................................................................................AATATCA---------------ACAGCA------ACAGCAACAT.......................................................................................................................23200.05101000
......................................................................................................................................................................................................CAATATCA---------------ACAGCA------ACAGCAACAAC......................................................................................................................25200.05101000
..............................................................................................................................................................................................AA------CAATATCA---------------ACAGCA------ACAGCAA..........................................................................................................................23200.05101000
...............................................................................................................................................................................................A------CAATATCA---------------ACAGCA------ACAGCAACA........................................................................................................................24200.05101000
....................................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAGCAGCAGCA.............................................25200.05101000
........................................................................................................................................................................................................................................................................C------------------------AACAGCAACAACAGCAGC.......................................................19200.05100010
..............................................................................................................................................................................................AA------CAATATCA---------------ACAGCA------ACAGCAACAA.......................................................................................................................26200.05101000
.......................................................................................................................................................................................................................................................AGC------------AGC------------------------AACAGCAACAACAGCAGC.......................................................24200.05101000
....................................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAGCAG..................................................20200.05100010
......................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCAGCA................................................20200.05100001
......................................................................................................................AACAGCAACAACA---G------------------CA------------------------------GCAGCA...........................................................................................................................................................................22200.05100010
...........................................GCAACAACAACAACAGCAGCAGC........................................................................................................................................................................................................................................................................................................23200.05100010
.....................................................................................................................................................................................................................................................................................................GCAACAACAGCAGCAGCAGCA................................................21200.05100010
...........................................................................................................................................................................................................................................AGCAACAACAGCAGC------------AGC------------------------AACAGC...................................................................24200.05100010
..............................................................................................................................................................................................AA------CAATATCA---------------ACAGCA------ACAGCAAC.........................................................................................................................24200.05101000
.....................................................................AATATCAACAGCAACAGCAACAT..............................................................................................................................................................................................................................................................................23200.05101000
..................................................................................................................................................................................................................................................................................................ACAGCAACAACAGCAGCAGCAGCA................................................24200.05100001
..........................................AGCAACAACAACAACAGCAGCAGCAAC.....................................................................................................................................................................................................................................................................................................27200.05100010
........................................................................................................................................................................................................................................................GC------------AGC------------------------AACAGCAACAACAGCAGCAGC....................................................26200.05101000
.................................................................................................................................................................................................................................CA------ACAGCAACAACAGCAGC------------....................................................................................................19200.05100010
.................................AACAGCAGCAGCAACAAC.......................................................................................................................................................................................................................................................................................................................18200.05101000
.......................................................................TATCAACAGCAACAGCAACAACAGC..........................................................................................................................................................................................................................................................................25200.05101000
.........................................................................................................................................................................................................TATCA---------------ACAGCA------ACAGCAACAACA.....................................................................................................................23200.05101000
.............................................................................................................................................................................................CAA------CAATATCA---------------ACAGCA------ACAGCAA..........................................................................................................................24200.05101000
......................................................................ATATCAACAGCAACAGCAACAAC.............................................................................................................................................................................................................................................................................23200.05101000
......................................................................ATATCAACAGCAACAGCAACAACAGC..........................................................................................................................................................................................................................................................................26200.05101000
...............................................................................................................................................................................................................................AGCA------ACAGCAACAACAGCAGC------------AGC------------------------.........................................................................24200.05100010
..............................................................................................................................................................................................AA------CAATATCA---------------ACAGCA------ACAGCA...........................................................................................................................22200.05101000
..........................................................................................................................................................................................................ATCA---------------ACAGCA------ACAGCAACAACA.....................................................................................................................22200.05101000
......................................................................................................................................................................................................................................................................AGC------------------------AACAGCAACAACAGCAGCAGC....................................................24200.05100010
...................................................................ACAATATCAACAGCAACAGCAACA...............................................................................................................................................................................................................................................................................24200.05101000
..................................................................AACAATATCAACAGCAACAGCAAC................................................................................................................................................................................................................................................................................24200.05101000
..........................................................................................................................................................................................................................................CAGCAACAACAGCAGC------------AGC------------------------AACA.....................................................................23200.05101000
droVir3
CTGGCCACCGAATCGAGTCCTTCGCTCAACTTTCCCATGGGCATGAGCGATGACGGCTCCGAGACGCACAGCGAGGACAACCAGATGATGCACAGCACCG---C---------------GCATCAGCAACA---TCTACTGCAGCAACAGCAACA------------------------------GC------------------------------------------------------------------AGCAGC---AGCAG---C------------------AGCAACAGCAACTGTTGCAGCC------GC---AGCAGACGAGCAGCTTTTTCGCCACGAATCCTTTCCA-GTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................TGGGCATGAGCGATGACGGCTCCGAGACGCACAGCGAGGACAACC........................................................................................................................................................................................................................................................................................4511.001000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................ACTGCAGCAACAGCAACA------------------------------GC------------------------------------------------------------------AGC..........................................................................................................2340.251001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................AGCAACA------------------------------GC------------------------------------------------------------------AGCAGC---AGCA................................................................................................19200.204004000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................ACTGCAGCAACAGCAACA------------------------------GC------------------------------------------------------------------.............................................................................................................20100.101001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AGCAG---C------------------AGCAACAGCAACT............................................................19200.102000000000000000100000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................AGC---AGCAG---C------------------AGCAACAGCA...............................................................19200.102000000000000000000000000000002000000000000000000000000000000000
................................................................................................................................................................................................................................................................AGC---AGCAG---C------------------AGCAACAGCAA..............................................................20200.102000000000000000000000000000000000000200000000000000000000000000
.................................................................................................................................................................................................................................................................GC---AGCAG---C------------------AGCAACAGCAACT............................................................21170.061001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ACAGCAACA------------------------------GC------------------------------------------------------------------AGCAGC---AGCA................................................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GC---AGCAG---C------------------AGCAACAGCAA..............................................................19200.051000000000000001000000000000000000000000000000000000000000000000
droMoj3
ATGGCCACCGAGTCGGGCGCCTCGCTCAACTTTCACATGGGCATCAGCGACGACGGCTCCGAGACGCACAGCGAGGACAATAAGTTGATGCGCAGCACCA---GCAGCAATCA---G---CAGCAGCAACA---G------------------CA------------------------------GCAACAG------CAACAG------CAGCAGCAGCAACTGTT------GCAGCCGCAACCTGTAGT-----------GGC-------------------GCAGCAACTGTTGCAGACGCAACAGCAGCAGCAAC---AACAACAAAGCAACTTCTTTGCTGCAAATCCCTTTGG---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................AATCA---G---CAGCAGCAACA---G------------------CA------------------------------GC...............................................................................................................................................................................2240.251100000
................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAAC---AAC.....................................18200.102000020
.............................................................................................................ATCA---G---CAGCAGCAACA---G------------------CA------------------------------GC...............................................................................................................................................................................21200.051100000
................................................................................................................................ACA---G------------------CA------------------------------GCAACAG------CAACAG------CAGCA...................................................................................................................................................24200.051000100
..........................................................................................................................GCAGCAACA---G------------------CA------------------------------GCAACAG------CAACAG------CA......................................................................................................................................................27200.051000010
...........................................................................................................................CAGCAACA---G------------------CA------------------------------GCAACAG------CAACAG------CA......................................................................................................................................................26200.051100000
...............................................................................................................................AACA---G------------------CA------------------------------GCAACAG------CAACAG------CA......................................................................................................................................................22200.051010000
droGri2
ATGACCACCGAGTCGAGTCCTTCGCTCAACTTCCACATGGGCATCAGTGACGACGGCAGCGAGACGCACAGCGAGGACAACAAAATGATGCACTCATCCA---AGAGTCAACT---GCATCAACAGCAGCA---A------------CAGCAACAGCAGCAGCAACAGCAACAGCAACAACAGCACCAGCAG------CATAATCA------------GCAAGTATTGCAACAGCAGCAGCAACATCAGC---------------------------------------AACAGCAGCAATTGTTGCAACAATCGCACCAGCATCAATCGAACAGCTATTTCGGCTCGAATCCATTTCA-ATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................A------------CAGCAACAGCAGCAGCAAC....................................................................................................................................................................................................20200.05110

Generated: 05/17/2015 at 11:11 PM