ID:

dya_700

 Coordinate:

3L:3899165-3899315 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.9 -35.6 -35.5

Flybase annnotation

exon [dyak_GLEANR_5125:3]; CDS [Dyak\GE21360-cds]; intron [Dyak\GE21360-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGATATACCGCGTAAATGGTTGGGAGTGAAGGGAGTGAATGCAGTTGCTGGAAGACCAAAGACTGAAGACTGAAGACTGAAGACTAAAGACTGAAGACCAAAGAGAGTGGGGAGCTCTCTACGCATTTGTAGAAAGTGCAAGTCGCGCCTGCGCAGCTGCGCGTGGCCATTGCGTGCTATGTTTGCCGTATGAGGTGC
**************************************************(((........))).....(((((...(((......(((.....(((((..(((....)))..)))))...)))....)))...)))))...............(((((((.....))))))).((((((((((.....))))))).))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 V120
male body		 M026
head
 V058
head
...........................GTCTGGCATTCTTGCACACC............................................................................................................................................................................................................ 20 0 1 3.00 3 0 3 0 0 0
...........................GTCTGGCATTCTTGCACACCAAG......................................................................................................................................................................................................... 23 0 1 2.00 2 1 1 0 0 0
............................TCTGGCATTCTTGCACACCAAG......................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0
...........................GGCTGGCATTCTTGCACACCAAGGTCC..................................................................................................................................................................................................... 27 3 1 2.00 2 0 2 0 0 0
..CATAAAATCGAAAATGTCAACAAGA................................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
.........................GAGTCTGGCATTCTTGCACACC............................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
...........................GTCTGGCATTCTTGCACACCAAGGTCC..................................................................................................................................................................................................... 27 2 1 1.00 1 0 0 0 1 0
...............................GGCATTCTTGCACACCAAGGTC...................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0
...........................GTCTGGCATTCTTGCACACCAAGGTC...................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.................GTCAACAATAGTCTGGCATTCT.................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
...........................GTCTGGCATTCTTGCACACCA........................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...........................GTCTGGCATTCTTGCACACCAG.......................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
.................GTCAACAAGAGTCTGGCATTCT.................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
............................TCTGGCATTCTTGCACACCAA.......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..........................AGTCTGGCATTCTTGCACACCAAGGTC...................................................................................................................................................................................................... 27 1 1 1.00 1 0 0 0 0 1
.........................GAGTCTGGCATTCTTGCACACCAAG......................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
....TAAAATCGAAAATGTCAACAAGA................................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
...................CAACAAGAGTCTGGCATTCC.................................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0
...................CAACAAGAGTCTGGCATTCT.................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..................................ATTCTTGCACACCAAGGTC...................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
.........TCGAAAATGTCAACAAGAGTCTGGC......................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
....................................................................ATGGTTGGGAGTGAAGGG..................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0
...........................GGCTGGCATTCTTGCACACC............................................................................................................................................................................................................ 20 1 1 1.00 1 0 1 0 0 0
...........................GTCTGGCATTCTTGCACAC............................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
..................................................................AAATTGTTGAGAGGGAAGGG..................................................................................................................................................................... 20 3 13 0.08 1 0 0 1 0 0
.......................................................................................................................................................CTAAGAGATTGGGAAGCTC................................................................................. 19 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

AGGTATTTTAGCTTTTACAGTTGTTCTCAGACCGTAAGAACGTGTGGTTCCACTCTATATGGCGCATTTACCAACCCTCACTTCCCTCACTTACGTCAACGACCTTCTGGTTTCTGACTTCTGACTTCTGACTTCTGATTTCTGACTTCTGGTTTCTCTCACCCCTCGAGAGATGCGTAAACATCTTTCACGTTCAGCGCGGACGCGTCGACGCGCACCGGTAACGCACGATACAAACGGCATACTCCACG
**************************************************(((........))).....(((((...(((......(((.....(((((..(((....)))..)))))...)))....)))...)))))...............(((((((.....))))))).((((((((((.....))))))).))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V058
head
 M043
female body
............................................................................................................................................................................................CACGGTCAGTGCGGGCGCGT........................................... 20 3 3 0.33 1 1 0
..........................TCAGATCGTAAGAAGGTG............................................................................................................................................................................................................... 18 2 3 0.33 1 1 0
........................................................................................................................................GATATCTGTCTTATGGTTTCT.............................................................................................. 21 3 5 0.20 1 1 0
................................................................................................CAACGACCTTCTGGCTGAT........................................................................................................................................ 19 3 14 0.07 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3L:3899115-3899365 + dya_700 TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATA----------------CCGCGTA-A-AT-----------------------------------------------------------------------------------GGTT---GGGAGTGAAGGGAGTGAA-----TGCAGTTG--------------------------------------------------------C------------------------------TGGAAGACCAAAGACTGAAG-----------ACTGAAGACTGAAGACTA-----AAGACTG--------AAGACCAAAGAGAGTG----G---GGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTATGTTTGCCGTATGAG------G-----TGC
droEre2 scaffold_4784:6042091-6042314 + der_742 TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATA----------------CCACATA-A-AT-----------------------------------------------------------------------------------GGTT---GGGAGTGAAGGGAG---------TGCAGTGG--------------------------------------------------------C------------------------------TGGAAGACCGAAGACTGAAG-----------ACTAA-------------------AGACTG-GAGA----------------GTG----T---GGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTATGTTTGCCGTATGAG------G-----TGC
droSec2 scaffold_2:3343533-3343772 + TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATG----------------CCACATG-A-AT-----------------------------------------------------------------------------------GGTG---GCGAGTGAAGGGAGTGAAGGCGTTGCAGTTG--------------------------------------------------------C------------------------------TGGAAGACCAAAGACCGAAGACTGAAG----ACCGA-------------------AGACTG-GAGA----------------GTG----T---AGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCGTATGAG------G-----TGT
droSim2 3l:3248823-3249055 + dsi_3170 TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATG----------------CCACATG-A-AT-----------------------------------------------------------------------------------GGTG---GCGAGTGAAGGGAGTGAAGGCGTTGCAGTTG--------------------------------------------------------C------------------------------TGGAAGACCAAAGACCGAAG-----------ACCGA-------------------AGACTG-GAGA----------------GTG----T---AGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCGTATGAG------G-----TGC
dm3 chr3L:3352083-3352315 + TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATG----------------CCACATA-A-AT-----------------------------------------------------------------------------------GGCG---GCGAGTGAAGGGAGTGAAGGCGTTGCAGTTG--------------------------------------------------------C------------------------------TGGAAGACCAAAGACCGAAG-----------ACTGA-------------------AGACTG-GAGA----------------GTG----T---AAAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCATATGAG------G-----TGC
droEug1 scf7180000409466:1080351-1080585 + TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAGATGTA----------------CCATATA-AAAT-----------------------------------------------------------------------------------GG---------------------AAGGGGCTGCAGTTG--------------------------------------------------------GTGGTT----------------GGTAG----TGGAAGGCTAAAGACCGAACACCAAAG----ACTGG-------------------AGAGTG-GAGA----------------GTG----A---CGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCGTATGAG------C-----ACC
droBia1 scf7180000302428:2719616-2719850 + TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ACACCATATACCATATATACCATATA-ATAT-----------------------------------------------------------------------------------GGGT---GG--ATGAAG------CAGGGACTGCAGTTG--------------------------------------------------------G------------------------------TGGAAGACCAAAGACCG------------------A-------------------AGACTG-GAGA----------------GTG----G---AGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCATATGAG------C-----ACC
droTak1 scf7180000415855:146988-147203 - TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAGATATA----------------CCATATA-A-AT----------------------------------------------------------------------------------------------------------AA---GCTGCAGTTTGA------------------------------------------------------C------------------------------T-GAAGACTAAAGACTGAAT-----------AGTGG-------------------AGAGTG-GAGAGTGAAGA---------GCG----G---AGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCATATGAG---------------
droEle1 scf7180000491249:1888920-1889154 - TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATAAAATG--------------------------------CACGTATA-------------TGTA--TATATT-----------------------------------------GGTG---GGGA-----------------------GTTG--------------------------------------------------------T------------------------------TG-AAGACAGAAGACTGAAGACAGAGG----ACAGA-------------------AGACTG-GAGA----------------GTG----G---AGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCGTATGAGTACGAGC-----TCC
droRho1 scf7180000777856:10245-10453 + TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATAGTGTGTTGTATATAT---------------ATA-------------------------TATGTATA---TGG-TGGATACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAG-----------ACTGG-------------------AGAGTG-GAGA----------------GTG----G---ATAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGGCTTATGAG------C-----TCC
droFic1 scf7180000454105:1680928-1681146 + TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATA----------------GCATTT-T-------------CCCATTTG-------------TGTG--TGTGTTG------------------------------------------TG---TTGT-----------------------GTTG--------------------------------------------------------T------------------------G---TGT---------------GGGGACTGGGG----AGTGA-------------------AGACTG-GTAA----------------GAG----G---AGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCGTATGAG------C-----AGC
droKik1 scf7180000302391:474560-474794 + TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAC--ATG----------------T-----------------------------------------------------GT-------CC------------------------------------------------------------A--------GC------------AGGAGGAGCAATCCGAGGGAGAGTGGATTGGAGTGGAGTGGAGTCTT----------------GGGAGAC--TGGAAG-------------------------GCTGA------------T------AGGCTGGGAGA----------------GTGAGTGG---CAAG---------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCATATGAG---------------
droAna3 scaffold_13337:10093604-10093814 - TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAG---------------------------------------------------------------------------------------------------------------------------------------------------GCAGTTCCCCCG----------AGGAGTCCCAAGTGGAGAG----------------------------------------------------------------T-AATGGTG-----------ATTGG-------------------ACAGTG-GAGAGTGCTGG---------GGA----G---AGAGCT-------CTACTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCTCATGAG------C-----TGA
droBip1 scf7180000396569:1261264-1261452 + TCCACAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAG--GCA----------------G----T-T-------------CCC----------------------------------------------------------------------------------------------------------------AG----------AGGAGTGGCAAGTGGAGAG----------------------------------------------------------------AGAGTGGAG-----------TTTGG-------------------AGTGTG-GAGA----------------GTG----GGGAAGAGAG-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CG-TTGCGTGCTTTG----------------------------
dp5 XR_group8:5431859-5432117 - dps_3332 TACATAAAATTGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACAAAGGTGAGAG--ACG----------------C---------------------ACACACGGTAAAGAGAGAGATAGACAGA---TGGACGGACACTCTCCAAAAAAAAAAAAAAAGAAAAGAGAGTGGCGACAGCGAGTGGAGGGAGTG---------CAGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------GA----------------GTG----G--AGTGGAT-------CT-TTACGCATTTGTAGAAAGTGCAAGTCTGCGGCTG-CGCAGCCAAGCGCGTGGCT-----CG-TTGCGTGCCTTGTTTGCCGTATGAG------C-----CGT
droPer2 scaffold_38:254413-254671 + TACATAAAATTGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACAAAGGTGAGAG--ACG----------------C---------------------ACACACGGGAAAGAGAGGGATAGACAGA---TGGACGGACACTCTCAAAAAAAAA---------AAAGAGAGTGGCGACAGCAAGTGGAGGGAGTGCAGGGAGTGCAGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------GA----------------GTG----G--AGTGGAT-------CT-TTACGCATTTGTAGAAAGTGCAAGTCTGCGGCTG-CGCAGCCAAGCGCGTGGCT-----CG-TTGCGTGCCTTGTTTGCCGTATGAG------C-----GGG
droWil2 scf2_1100000004768:1052330-1052555 - TACATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGTGTTTTC----------------CCAAATA-G---AAAGAGATGCACATACC----------------------------------------------------------------------------------------------------------------------------------------------------------------C-----TGAATAAAGAGGGTGGAGTG---GGCG-A-----------------------GGAGAGA--------------GAAAGA--------GAGA----------------GATAGAG-----A--AG-------GC-CTACGCATGTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGCCATGGCCA-TTGCGTGCTTTGTTTGTCTTATGAG------A-----T--
droVir3 scaffold_13049:5237021-5237204 + TACATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTACGT-----A------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGGAGA---A---AGGG-A------------------------GGGAGA--------------GAGAGA-----GA-GAGA----------------GAGAGAG----AAAAAG-------GC-CTACGCATTTGTAGAAAGTGCAAGTC-TC--TTGAGGCAGCT--GCGCGTGGA------CG-TTGCGTGCTTTGTTTGCCACATGAG------C-----TGC
droMoj3 scaffold_6680:3603732-3603938 + TACATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTACGTGT----------------------------G---AAAGAGAT----------------------------------GT-------GT------------------------------------------------------------G--------ACAGAGA-------------------------------------------------------------------------G---TGCG-A-----------------C-----AGAAAGA--------------GAAAGA--------GAGA----------------GAGAGAG----ATAAAG-------GC-CTACGCATTTGTAGAAAGTGCAAGTC-TC--TTGAGGCAGCT--GCGCGTGGCC-----TG-TTGCGTGCTTTGTTTGCCACATGAGTG--AGCCATCATAC
droGri2 scaffold_15110:13746760-13746966 - TACACAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTAA-AC--ATA------------------------A---------------------------------------------GT-------GC------------------------------------------------------------A--------ACAGAGAGACACTT---------------------------------------------------------------ATCG---AGCG-A------------------------GAGAGA--------------GAAAGA-----GG-GAGA----------------GAGAGA-G---AGAGTTTGCTTAGGC-CTACGCATTTGTAGAAAGTGCAAGTC-TTGA----AGCAGCT--GCGCGTAGCC-----CGTTTGCGTGCTTTGTTTGCCACATGAG------T-----TAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATA----------------CCGCGTA-A-AT-----------------------------------------------------------------------------------GGTT---GGGAGTGAAGGGAGTGAA-----TGCAGTTG--------------------------------------------------------C------------------------------TGGAAGACCAAAGACTGAAG-----------ACTGAAGACTGAAGACTA-----AAGACTG--------AAGACCAAAGAGAGTG----G---GGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTATGTTTGCCGTATGAG------G-----TGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................GTCTGGCATTCTTGCACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300300000000
...........................GTCTGGCATTCTTGCACACCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00201100000000
............................TCTGGCATTCTTGCACACCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00202000000000
..CATAAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.........................GAGTCTGGCATTCTTGCACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
...........................GTCTGGCATTCTTGCACACCAAGGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000
...............................GGCATTCTTGCACACCAAGGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
...........................GTCTGGCATTCTTGCACACCAAGGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...........................GTCTGGCATTCTTGCACACCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...........................GTCTGGCATTCTTGCACACCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.................GTCAACAAGAGTCTGGCATTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
............................TCTGGCATTCTTGCACACCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..........................AGTCTGGCATTCTTGCACACCAAGGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000100000
.........................GAGTCTGGCATTCTTGCACACCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
....TAAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
...................CAACAAGAGTCTGGCATTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
...................CAACAAGAGTCTGGCATTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..................................ATTCTTGCACACCAAGGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.........TCGAAAATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
........................................................................................AT-----------------------------------------------------------------------------------GGTT---GGGAGTGAAGGG.............................................................................................................................................................................................................................................................................................................................1811.00100000010000
...........................GTCTGGCATTCTTGCACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEre2
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATA----------------CCACATA-A-AT-----------------------------------------------------------------------------------GGTT---GGGAGTGAAGGGAG---------TGCAGTGG--------------------------------------------------------C------------------------------TGGAAGACCGAAGACTGAAG-----------ACTAA-------------------AGACTG-GAGA----------------GTG----T---GGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTATGTTTGCCGTATGAG------G-----TGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...ATAAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000110
...........................GTCTGGCATTCTTGCACACCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0021010000
.CCATAAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0022000000
..CATAAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
....................AACAAGAGTCTGGCATTCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
...............ATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.................................................................................................................................................................................................................................................................................................................................................................AGACTG-GAGA----------------GTG----T---GGAGC.................................................................................................................1911.0010100000
.............................CTGGCATTCTTGCACACCAAGGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
......................................................GAT--ATA----------------CCACATA-A-AT-----------------------------------------------------------------------------------GGTT---GGGAGT...................................................................................................................................................................................................................................................................................................................................2611.0010000100
..........................AGTCTGGCATTCTTGCACACCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.CCATAAAATCGAAAATGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.......................AAGAGTCTGGCATTCTTGCACACCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.........................GAGTCTGGCATTCTTGCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
...................CAACAAGAGTCTGGCATTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
droSec2
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATG----------------CCACATG-A-AT-----------------------------------------------------------------------------------GGTG---GCGAGTGAAGGGAGTGAAGGCGTTGCAGTTG--------------------------------------------------------C------------------------------TGGAAGACCAAAGACCGAAGACTGAAG----ACCGA-------------------AGACTG-GAGA----------------GTG----T---AGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCGTATGAG------G-----TGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........ATCGAAAATGTCAACAAGAGTCTGGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
..............AATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...ATAAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.................GTCAACAAGAGTCTGGCATTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
..................TCAACAAGAGTCTGGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
.................GTCAACAAGAGTCTGGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...............................GGCATTCTTGCACACCAAGGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
...........................GTCTGGCATTCTTGCACACCAAGGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
droSim2
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATG----------------CCACATG-A-AT-----------------------------------------------------------------------------------GGTG---GCGAGTGAAGGGAGTGAAGGCGTTGCAGTTG--------------------------------------------------------C------------------------------TGGAAGACCAAAGACCGAAG-----------ACCGA-------------------AGACTG-GAGA----------------GTG----T---AGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCGTATGAG------G-----TGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................CAACAAGAGTCTGGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.00420200000000000000
..............AATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00301110000000000000
.................GTCAACAAGAGTCTGGCATTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00302001000000000000
................TGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00202000000000000000
.............AAATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00210100000000000000
...........................GTCTGGCATTCTTGCACACCAAGGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00201000000000100000
............AAAATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.....AAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...............ATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
..CATAAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................ACCGA-------------------AGACTG-GAGA----------------GTG----T---AGAGCT-------.........................................................................................................2511.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGAAAGTGCAAGTC-C..........................................................................1811.00100100000000000000
..........CGAAAATGTCAACAAGAGTCTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.CCATAAAATCGAAAATGTCAACAAGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.CCATAAAATCGAAAATGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................A----------------GTG----T---AGAGCT-------CT-CGC...................................................................................................16200.05100000000001000000
dm3
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATG----------------CCACATA-A-AT-----------------------------------------------------------------------------------GGCG---GCGAGTGAAGGGAGTGAAGGCGTTGCAGTTG--------------------------------------------------------C------------------------------TGGAAGACCAAAGACCGAAG-----------ACTGA-------------------AGACTG-GAGA----------------GTG----T---AAAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCATATGAG------G-----TGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........CGAAAATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AGACCAAAGACCGAAG-----------ACTGA-------------------AG..........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GCGTTGCAGTTG--------------------------------------------------------C------------------------------TGGAAGACCAAA.......................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................AACAAGAGTCTGGCATTCTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AAAATCGAAAATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CTGGCATTCTTGCACACCAAGGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATTCTTGCACACCAAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATCGAAAATGTCAACAAGAGTCTGGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
........................................................................................................................................................................................................................................................................................................................CCGAAG-----------ACTGA-------------------AGACTG-GAGA----------------.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.........TCGAAAATGTCAACAAGAGTCTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TTG--------------------------------------------------------C------------------------------TGGAAGACCAAAGACCGAAG-----------AC..................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CCATAAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AGTGAAGGGAGTGAAGG.....................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GACCGAAG-----------ACTGA-------------------AGACTG-GA...................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................GAGTGAAGGGAGTGAAGGCGTTGCA..............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............AATGTCAACAAGAGTCTGGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..................TCAACAAGAGTCTGGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GTCAACAAGAGTCTGGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CATAAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCT--GCGCGTGGC------CA-TTGCGTGC................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AGACCGAAG-----------ACTGA-------------------AGACTG-GA...................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................CAACAAGAGTCTGGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
................TGTCAACAAGAGTCTGGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.......................AAGAGTCTGGCATTCTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.....................ACAAGAGTCTGGCATTCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................ACCAAAGACCGAAG-----------ACTG................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTCTGGCATTCTTGCACACCAAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAGATGTA----------------CCATATA-AAAT-----------------------------------------------------------------------------------GG---------------------AAGGGGCTGCAGTTG--------------------------------------------------------GTGGTT----------------GGTAG----TGGAAGGCTAAAGACCGAACACCAAAG----ACTGG-------------------AGAGTG-GAGA----------------GTG----A---CGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCGTATGAG------C-----ACCSizeHit CountTotal NormTotal
No Reads
droBia1
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ACACCATATACCATATATACCATATA-ATAT-----------------------------------------------------------------------------------GGGT---GG--ATGAAG------CAGGGACTGCAGTTG--------------------------------------------------------G------------------------------TGGAAGACCAAAGACCG------------------A-------------------AGACTG-GAGA----------------GTG----G---AGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCATATGAG------C-----ACCSizeHit CountTotal NormTotal
No Reads
droTak1
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAGATATA----------------CCATATA-A-AT----------------------------------------------------------------------------------------------------------AA---GCTGCAGTTTGA------------------------------------------------------C------------------------------T-GAAGACTAAAGACTGAAT-----------AGTGG-------------------AGAGTG-GAGAGTGAAGA---------GCG----G---AGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCATATGAG---------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATAAAATG--------------------------------CACGTATA-------------TGTA--TATATT-----------------------------------------GGTG---GGGA-----------------------GTTG--------------------------------------------------------T------------------------------TG-AAGACAGAAGACTGAAGACAGAGG----ACAGA-------------------AGACTG-GAGA----------------GTG----G---AGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCGTATGAGTACGAGC-----TCCSizeHit CountTotal NormTotal
No Reads
droRho1
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATAGTGTGTTGTATATAT---------------ATA-------------------------TATGTATA---TGG-TGGATACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAG-----------ACTGG-------------------AGAGTG-GAGA----------------GTG----G---ATAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGGCTTATGAG------C-----TCCSizeHit CountTotal NormTotal
No Reads
droFic1
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAT--ATA----------------GCATTT-T-------------CCCATTTG-------------TGTG--TGTGTTG------------------------------------------TG---TTGT-----------------------GTTG--------------------------------------------------------T------------------------G---TGT---------------GGGGACTGGGG----AGTGA-------------------AGACTG-GTAA----------------GAG----G---AGAGCT-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCGTATGAG------C-----AGCSizeHit CountTotal NormTotal
No Reads
droKik1
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAC--ATG----------------T-----------------------------------------------------GT-------CC------------------------------------------------------------A--------GC------------AGGAGGAGCAATCCGAGGGAGAGTGGATTGGAGTGGAGTGGAGTCTT----------------GGGAGAC--TGGAAG-------------------------GCTGA------------T------AGGCTGGGAGA----------------GTGAGTGG---CAAG---------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCATATGAG---------------SizeHit CountTotal NormTotal
No Reads
droAna3
TCCATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAG---------------------------------------------------------------------------------------------------------------------------------------------------GCAGTTCCCCCG----------AGGAGTCCCAAGTGGAGAG----------------------------------------------------------------T-AATGGTG-----------ATTGG-------------------ACAGTG-GAGAGTGCTGG---------GGA----G---AGAGCT-------CTACTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CA-TTGCGTGCTTTGTTTGCCTCATGAG------C-----TGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................CAACAAGAGTCTGGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.........................GAGTCTGGCATTCTTGCACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................ACAAGAGTCTGGCATTCTTGCACACCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
.................GTCAACAAGAGTCTGGCATTCTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..............AATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
......................................................................................................................................................................................................................................GTCCCAAGTGGAGAG----------------------------------------------------------------T-AATGGTG-----------....................................................................................................................................................................................2311.001010000
...........................GTCTGGCATTCTTGCACACCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..........................AGTCTGGCATTCTTGCACACCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...........................GTCTGGCATTCTTGCACACCAAGGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000
.....AAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
........ATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
...........................GTCTGGCATTCTTGCACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.............AAATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
droBip1
TCCACAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGAG--GCA----------------G----T-T-------------CCC----------------------------------------------------------------------------------------------------------------AG----------AGGAGTGGCAAGTGGAGAG----------------------------------------------------------------AGAGTGGAG-----------TTTGG-------------------AGTGTG-GAGA----------------GTG----GGGAAGAGAG-------CT-CTACGCATTTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGC------CG-TTGCGTGCTTTG----------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TACATAAAATTGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACAAAGGTGAGAG--ACG----------------C---------------------ACACACGGTAAAGAGAGAGATAGACAGA---TGGACGGACACTCTCCAAAAAAAAAAAAAAAGAAAAGAGAGTGGCGACAGCGAGTGGAGGGAGTG---------CAGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------GA----------------GTG----G--AGTGGAT-------CT-TTACGCATTTGTAGAAAGTGCAAGTCTGCGGCTG-CGCAGCCAAGCGCGTGGCT-----CG-TTGCGTGCCTTGTTTGCCGTATGAG------C-----CGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............AATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
...........GAAAATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020200000000
.............AAATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
.......................................................................................................................ATAGACAGA---TGGACGGACAC...............................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................TCTGGCATTCTTGCACACAAAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
............AAAATGTCAACAAGAGTCTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
.............................................................................................................................................................................................GGGAGTG---------CAGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------GA----------------GTG----G--AGTG...................................................................................................................2311.0010100000000
........ATTGAAAATGTCAACAAGAGTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...............ATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................AGTCTGGCATTCTTGCACACAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.........................GAGTCTGGCATTCTTGCACACAAAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGCAAGTCTGCGGCTG-CGCAG..............................................................2411.0010000100000
...................CAACAAGAGTCTGGCATTCTTGCACACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
.................GTCAACAAGAGTCTGGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
.......................AAGAGTCTGGCATTCTTGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................ATTCTTGCACACAAAGGTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010010000000
..............................................................................................................................................TCTCCAAAAAAAAAAAAAAA...........................................................................................................................................................................................................................................................................................................................................................2040.2510100000000
droPer2
TACATAAAATTGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACAAAGGTGAGAG--ACG----------------C---------------------ACACACGGGAAAGAGAGGGATAGACAGA---TGGACGGACACTCTCAAAAAAAAA---------AAAGAGAGTGGCGACAGCAAGTGGAGGGAGTGCAGGGAGTGCAGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------GA----------------GTG----G--AGTGGAT-------CT-TTACGCATTTGTAGAAAGTGCAAGTCTGCGGCTG-CGCAGCCAAGCGCGTGGCT-----CG-TTGCGTGCCTTGTTTGCCGTATGAG------C-----GGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............ATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.005302000
...........GAAAATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.005500000
..............AATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
...........................GTCTGGCATTCTTGCACACAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
................TGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
...........................................................................................................................................................................................................................................................................................................................................................................A----------------GTG----G--AGTGGAT-------CT-TTACGC................................................................................................2011.001100000
...................................................................................................................AGGGATAGACAGA---TGGACGGACACT..............................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...........................GTCTGGCATTCTTGCACACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............AATGTCAACAAGAGTCTGGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................CAACAAGAGTCTGGCATTCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droWil2
TACATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTGAGTGTTTTC----------------CCAAATA-G---AAAGAGATGCACATACC----------------------------------------------------------------------------------------------------------------------------------------------------------------C-----TGAATAAAGAGGGTGGAGTG---GGCG-A-----------------------GGAGAGA--------------GAAAGA--------GAGA----------------GATAGAG-----A--AG-------GC-CTACGCATGTGTAGAAAGTGCAAGTC-GCGCCTG-CGCAGCT--GCGCGTGGCCATGGCCA-TTGCGTGCTTTGTTTGTCTTATGAG------A-----T--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............ATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.00610320
.................GTCAACAAGAGTCTGGCATTCTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300111
...ATAAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200020
.........................GAGTCTGGCATTCTTGCACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
..............AATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...............................................................................................................................................................................................................................................................................................GGAGTG---GGCG-A-----------------------GGAGAGA--------------...................................................................................................................................................................1811.00101000
.................GTCAACAAGAGTCTGGCATTCTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
..................TCAACAAGAGTCTGGCATTCTTGCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.....................ACAAGAGTCTGGCATTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...........................GTCTGGCATTCTTGCACACCAAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...................CAACAAGAGTCTGGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
................TGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
..........................................................................................................................................................................................................................................................................................AGGGTGGAGTG---GGCG-A-----------------------GGAGA...................................................................................................................................................................................2111.00101000
.................GTCAACAAGAGTCTGGCATTCTTGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...................CAACAAGAGTCTGGCATTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
........................................................................................................................................................................................................................................................................................................................................GAGA--------------GAAAGA--------GAGA----------------GATA.............................................................................................................................18200.05100100
........................................................................................................................................................................................................................................................................................................................................GAGA--------------GAAAGA--------GAGA----------------GATAG............................................................................................................................19200.05100100
droVir3
TACATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTACGT-----A------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGGAGA---A---AGGG-A------------------------GGGAGA--------------GAGAGA-----GA-GAGA----------------GAGAGAG----AAAAAG-------GC-CTACGCATTTGTAGAAAGTGCAAGTC-TC--TTGAGGCAGCT--GCGCGTGGA------CG-TTGCGTGCTTTGTTTGCCACATGAG------C-----TGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................GTCTGGCATTCTTGCACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003002100000000000000000000000000000000000000000000000000000000000
........ATCGAAAATGTCAACAAGAGTCTGGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000000000000000001100000000000000000000000000000000000000000000
.................GTCAACAAGAGTCTGGCATTCTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGCAGCT--GCGCGTGGA------CG-........................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................CAAGAGTCTGGCATTCTTGCACACCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000100000000000000000000000000000000000000000
.ACATAAAATCGAAAATGTCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
..CATAAAATCGAAAATGTCAACAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...........................GTCTGGCATTCTTGCACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................GTCTGGCATTCTTGCACACCAAGGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.....................................CTTGCACACCAAGGTACGT-----A------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGGA..............................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
........ATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.............AAATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGTTTGCCACATGAG------C-----T..2011.001000000000000100000000000000000000000000000000000000000000000000
...ATAAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
....................AACAAGAGTCTGGCATTCTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
...........GAAAATGTCAACAAGAGTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........ATCGAAAATGTCAACAAGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
.................GTCAACAAGAGTCTGGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
......................................TTGCACACCAAGGTACGC-----T------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....................................................................................................................................................................................................................................2090.111000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GGAGA--------------GAGAGA-----GA-GAGA----------------GA...............................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
TACATAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTACGTGT----------------------------G---AAAGAGAT----------------------------------GT-------GT------------------------------------------------------------G--------ACAGAGA-------------------------------------------------------------------------G---TGCG-A-----------------C-----AGAAAGA--------------GAAAGA--------GAGA----------------GAGAGAG----ATAAAG-------GC-CTACGCATTTGTAGAAAGTGCAAGTC-TC--TTGAGGCAGCT--GCGCGTGGCC-----TG-TTGCGTGCTTTGTTTGCCACATGAGTG--AGCCATCATACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................GTCTGGCATTCTTGCACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.................GTCAACAAGAGTCTGGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.................GTCAACAAGAGTCTGGCATTCTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...........................GTCTGGCATTCTTGCACACCAAGGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.............................CTGGCATTCTTGCACACCAAGGTACGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
TACATAAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...........................................................................................................................................................................................................G--------ACAGAGA-------------------------------------------------------------------------G---TGCG-A-----------------C-----AGAAAGA--------------...................................................................................................................................................................2211.001100000
...ATAAAATCGAAAATGTCAACAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......................................................................................................................................................................................................................................................................................................................................GAAAGA--------------GAAAGA--------GAGA----------------GA...............................................................................................................................18200.051100000
..........................................................................................................................................................................................................................................................................................................................................GA--------------GAAAGA--------GAGA----------------GAGAGAG----A.....................................................................................................................20200.051000010
droGri2
TACACAAAATCGAAAATGTCAACAAGAGTCTGGCATTCTTGCACACCAAGGTAA-AC--ATA------------------------A---------------------------------------------GT-------GC------------------------------------------------------------A--------ACAGAGAGACACTT---------------------------------------------------------------ATCG---AGCG-A------------------------GAGAGA--------------GAAAGA-----GG-GAGA----------------GAGAGA-G---AGAGTTTGCTTAGGC-CTACGCATTTGTAGAAAGTGCAAGTC-TTGA----AGCAGCT--GCGCGTAGCC-----CGTTTGCGTGCTTTGTTTGCCACATGAG------T-----TAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:00 PM