ID:

dya_696

 Coordinate:

3L:3634136-3634286 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.1 -29.9 -29.8 -29.8

Flybase annnotation

CDS [Dyak\GE20723-cds]; exon [dyak_GLEANR_4548:12]; intron [Dyak\GE20723-in]

Repeatable elements

NameClassFamilyStrand
Hoyak2DNAhAT-Ac+
DNAREP1_DYakRCHelitron-
mature
  1. 3L:1986815-1986835 -
  2. dya_696  3L:3634257-3634277 -
  3. 3L:7033523-7033543 -
  4. 2R:1273656-1273676 -
  5. 2R:5340743-5340763 -
  6. X:9588709-9588729 -
  7. 3R:16727115-16727135 -
  8. 3R:17182420-17182440 -
  9. v2_chrUn_960:17217-17237 -
  10. v2_chrUn_1329:26551-26571 -
  11. v2_chrUn_1355:28474-28494 -
  12. v2_chrUn_4218:14309-14329 -
  13. v2_chrUn_4570:12308-12328 -
  14. v2_chrUn_3278:10582-10602 -
  15. v2_chrUn_6166:9992-10012 -
  16. v2_chrUn_6425:52-72 -
  17. v2_chrUn_6903:15867-15887 -
  18. v2_chrUn_6968:3690-3710 -
  19. v2_chr3L_random_039:11408-11428 -
  20. v2_chrUn_002:407570-407590 -
  21. 3L:12384732-12384752 +
  22. 3L:16663444-16663464 +
  23. 2L:21359018-21359038 +
  24. 2L:21378803-21378823 +
  25. 2L:21900880-21900900 +
  26. 2R:464070-464090 +
  27. 2R:4161220-4161240 +
  28. 3R:5363389-5363409 +
  29. 3R:27094629-27094649 +
  30. 4:34092-34112 +
  31. v2_chrUn_1071:368-388 +
  32. v2_chrUn_1607:596-616 +
  33. v2_chrUn_1719:328-348 +
  34. v2_chrUn_5136:418-438 +
  35. v2_chrUn_5194:125-145 +
  36. v2_chrUn_6943:3486-3506 +
  37. v2_chr2L_random_028:678474-678494 +
  38. v2_chr2L_random_031:171667-171687 +
  39. v2_chr2h_random_026:45160-45180 +
  40. v2_chrUn_650:337-357 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTGAAAATTTCTATCGATTTGCAAAAAATCTTTTTGCCACGCCCACTCTAACGCCCACAAACCGCCAAAAACTGTCCTTCGCACTTACACTAGCTGAGTAACGGGTATCAGATAGTCGGGGAACTCGACTATAGCGTTCTCTCTTGTTTGGTTTACGACTGTTGTTGTTTCATGTTTTATGGCTTCCTTCCGATGGTGCAGTGCCGCCGAAAATTATGCCCATCCAGGCCATGACGAACATGCTCCGCGAG
**************************************************.....................(((.((..((..........((((....((((.......((((((((..(((((.(((................))).))))).)))))))).........))))....))))......))..))..)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
.............TCGATTTGCAAAAAATCTTTTTGCC..................................................................................................................................................................................................................... 25 0 20 0.15 3 0 3
...........................................................AACCGCCAAAAACTGTCCTTC........................................................................................................................................................................... 21 0 20 0.10 2 2 0
........................AAAATCTTTTTGCCACGCCCA.............................................................................................................................................................................................................. 21 0 20 0.05 1 1 0
...........................ATCTTTTTGCCACGCCCACTCTAACGCC.................................................................................................................................................................................................... 28 0 20 0.05 1 1 0
............................................................................CTTCGCACTTACACTAGCTGAG......................................................................................................................................................... 22 0 20 0.05 1 0 1

Anti-sense strand reads

AACTTTTAAAGATAGCTAAACGTTTTTTAGAAAAACGGTGCGGGTGAGATTGCGGGTGTTTGGCGGTTTTTGACAGGAAGCGTGAATGTGATCGACTCATTGCCCATAGTCTATCAGCCCCTTGAGCTGATATCGCAAGAGAGAACAAACCAAATGCTGACAACAACAAAGTACAAAATACCGAAGGAAGGCTACCACGTCACGGCGGCTTTTAATACGGGTAGGTCCGGTACTGCTTGTACGAGGCGCTC
**************************************************.....................(((.((..((..........((((....((((.......((((((((..(((((.(((................))).))))).)))))))).........))))....))))......))..))..)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M056
embryo
 M043
female body
 V120
male body		 GSM1528802
follicle cells		 M026
head
........................................................................ACAGGAAGCGTGAATGTGATCGACT.......................................................................................................................................................... 25 0 20 0.30 6 6 0 0 0 0
....................................................................TTTGACAGGAAGCGTGAATGTGATCGA............................................................................................................................................................ 27 0 20 0.15 3 0 3 0 0 0
.....................................................................TTGACAGGAAGCGTGAATGTGATCGACT.......................................................................................................................................................... 28 0 20 0.15 3 3 0 0 0 0
...............................................................CGGTTTTTGACAGGAAGCGTGAATTT.................................................................................................................................................................. 26 1 20 0.15 3 3 0 0 0 0
.......................................................................................................CCATAGTCTATCAGCCCCTTGAGCTGA......................................................................................................................... 27 0 20 0.15 3 0 3 0 0 0
............................................TGAGATTGCGGGTGTTTGG............................................................................................................................................................................................ 19 0 20 0.10 2 0 2 0 0 0
.......................................................................................................CCATAGTCTATCAGCCCCTTGAGCTG.......................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
.......................................................................................GTGATCGACTCATTGCCCATAGTCT........................................................................................................................................... 25 0 20 0.10 2 0 2 0 0 0
..........................................................TTTGGCGGTTTTTGACAGGAAGCGT........................................................................................................................................................................ 25 0 20 0.10 2 2 0 0 0 0
...............................................................................................................TATCAGCCCCTTGAGCTGATATCG.................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0
...................................................................................................TTGCCCATAGTCTATCAGCCCC.................................................................................................................................. 22 0 20 0.05 1 0 0 0 0 1
................................................................................CGTGAATGTGATCGACTCA........................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0
........................................................................................TGATCGACTCATTGCCCATAGTCTAT......................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0
.........................................................................CAGGAAGCGTGAATGTGATCGAC........................................................................................................................................................... 23 0 20 0.05 1 0 0 1 0 0
......................................................................TGACAGGAAGCGTGAATGTG................................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0
.....................................................................................ATGTGATCGACTCATTGCCC.................................................................................................................................................. 20 0 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................................................ACGTGACGGCGGCTT........................................ 15 1 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3L:3634086-3634336 - dya_696 TTGAAAATTTC-----TATCGATTTGCAAAAAATCTTTTTGCCACGCCCACTCTAACGCC-----------------------------------------------------------CACAAA-------------------------------CCG------------------------CCAAAAACTGT-CCTT-------CGCACTTACACTAGCTGAGTAACGGGTATCAG---ATAGTCGGGG-A----ACTCG------ACTATAGCGTTCTCTCTTGTT-TGGTT-----------TA------CGACT---GTTGT-------TGTTT----CATGTTTT-------------------ATGGCTTCC-------------TTCC------------GATGGTG---------CAGTGCCGCCGAAAATTATGC-----------------------------CCATCCAGGCCATGACGAACATGCTCCGCGAG
droEre2 scaffold_4512:431958-432185 + GTGTAAATTTC-----TATAGACTTGCCAAAAAATG-TTTTGCACGCCCAC---------AAA-ACGACCA------AAA----------------------------------CTCTC-----------------ACGCCCTCTCTTCCCC---------CAAATTT------------------------CT-CGTT-------TGCACTTCCACTAGCTGAGTAACGGGTATCTG---ATAGTCGGGG-A----ACTCA------ACTGTAGCATTCTATATTTTT-GTATT----------TTA------TA------TTTGC--------------------------------------------------------TG-----------TTCCAG------------TTT---------CTA---------------TCTATTTTGGCCACGACGCTTACAAC-CGC--------------CAAAAACT---------A
droSec2 scaffold_8:3394827-3395038 - TTGTGAATTTC-----TGTCGACATGCA-----------------------------------------------TTAATTTTTTTCTCATTTTAATCCTCAACATCTATCGATATCCCAGAAAAATTATGAAATA--------------------------------------------------------------T-------CGCATTCACACTAGCTGAGTAACGGGTATCTG---ATAGTCGG----------------------ATAGCATTCTCTGTTGTT-TTTTT-----------TT------T------------------------GTATT------------------------------------TGCGT-----------TGCCTGCCTTTTTGTGATACGCTGCTGGC-------------CCCGAGC-----------------------------CTGTTCTGGCCACAA-----------------
droSim2 x:19819842-19820062 - CTGTGAATTTC-----TATCGACATGCA-----------------------------------------------TCAATTTTTTTCTCATTTTAATCACCAACATCTTTCGATATCCCAGAAAAATTATGAAATA--------------------------------------------------------------T-------CGCATTCACACTAGCTGAGTAACGGGTATCTG---ATAGTCGG----------------------ATAGCATTCTCTCTTGTT-TTTTT-TTTTTTTTTTT-------T------------------------GTATT------------------------------------TGCGT-----------TGCCTGCCTTTTTGTGATACGCTGCTGGC-------------CCCGAGC-----------------------------CTGTTCTGGCCACAA-----------------
dm3 chr3LHet:741103-741326 + TTGTAAATTTC-----TATCGATTTGCCAAAAAATT-TTTGCCGCGCCCAC---------AATTTTGAACAATTTTTAAATTTGTTCTCATTTTATTCCC------------------------------------------------------------------------------------------------CTT-------TGCATTCACACTAGCTAAGTAACGGGTATCTG---ATAGTCGGGG-A----ACTCG------ACTATAGCATACACTCTTGTT-TTTAA-TTAAATTTAT-AATACCTCTATTGTT-----------------TTAGT------------------------------------TACGT-----------TTTTCATCT---AATTGTT---------CAATTCTACCG-----------------------------------------------------------------------
droEug1 scf7180000409524:379805-379988 - ACTGGGTTTTG-----TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAAGCCAACTGCCATGGCAATTGTTAGCCG---GTTTTCGCGA-C----ACTCA------ACG------TTTTTGCCCGCC-GAATG-TTTTTCGGTTTA------CG------GTTTG-------TGTTT----CATGTTTT-------------------ATGGCTTCC-------------TTCC------------GAT-----------TACAGTGCCTCCGAAAATTATGC-----------------------------CCATCCAGGCCATGACGAACATGCTTCGCGAA
droBia1 scf7180000301348:15426-15668 - AATACA----------TATTGACTCACCAAAAACA--GGTGCCACGCCGGT---------AGG-TGGAGCA---------------------------------------------------------ATAAAATATCGCT-TTTCTGCTTATAAATTTTCATTATCC----------------------------CTT-------T--GTTCCCTTAAGCTGAGTAATGGGTA--------TAGTCGAGG-C----GCTCG------ACTATAGCGTTCCTCCCTGTT-GTGTA-----------TA------TT------TTGGT--------G-------C------------------------------------TGCGTCACCACTTAG-----AGATTTTTTAGGACTTAGTGCTAAG-------------ACTACAA------------------------C-TGCACGCATTGGACACGAAGAAAATG---------
droTak1 scf7180000410805:1061-1274 + AAAAATTATAT------AT-------------------------------------------------------------------------------------------CTATCTCCC-----------------TCGCACTCCCTTTAGC---------TGAGTTACGATTATTAGCTGGGACACCAACCCG-CGTT-------CGCACTTCTTTTAGCTGAGTGACGGGTATTAG---ATAGTCGGGA-CAACAACCCG------ACTATAGCGTTCTCTCTTGTT-TTTTTAAC-------ACA------TA------GTTGT--------------------------------------------------------TC-----------TGCTA------------AG---------TTGCA---------------TTTTCAAAAGTTGCATTGCTAACTTTATGCACAT----------------------------
droEle1 scf7180000489368:3774-3906 + G----------------------------------------CCACGCCCACTCTAACTCC-----------------------------------------------------------TAAAAAATCGCG-------------------------------AAATTT------------------------CTGGGTT-------TTCAAATTGGTTAACTGAGTAACGGGTGTCTA---AAAGTCGAGG-A----ACTCG------ACTATATCGTTTCTTCTTGTT-TGATT-----------TA------TA------TTATT--------TTTT----C------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000777570:27926-28114 - ATCAACGTTTC-----TATCT-----------------------------------------------------------------------------------------CCATCTC-------------------------------------------------------------------------------CCT-------CGCACTCCCTTTACCTAAGTAACGGGTATCTG---ATAGTCGGGG-C----ACCCG------ACTATAGCGTTCTCTCTTGTT-AGGAA-----------TG------TT------TTTGG-------------------TAATTGCAAAGTCTATTAAATCGGGTAGTTTCC-------------TTC-------------------------------GGTCTGCCGGCCATTATGT-----------------------------TCGTCT--GCCAGGAGAAACATAGTCC-----
droFic1 scf7180000453906:655483-655630 + AAGCATT------------------------------TGTGCCACGCTCACTATTACGCA-----------------------------------------------------------CACCAC-------------------------------CCT------------------------ATGGGGCGTAT-CA-T-------CTCCTATTGTTTAATTGAGGAATGGGTATCTG---ATAGTCGATG-C----ACTAG------ACTATAGCGATCTCTCTTATT-TGATT-----------TT------AT---------------------TT----CGGTTTTT-------------------GTAGCCT---------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302383:435783-435880 + TTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG------CG------GCTTG-------TGTCT----GATGCTTT-------------------ATGGCTTCC-------------GT------------TTT-T-----------CGCAGTGCCACCGAAAATCATGC-----------------------------CCATCCAGGCCATGACGAACATGCTCCGCGAG
droAna3 scaffold_13337:3267384-3267497 + TTTTGGCTTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-TG----GT-------TTA------CG------GCTTGCATTTCATGTTT----GATGTTTT-------------------ATTACTTCC-------------CCCC--------------------------AACAGTGCCGCCGAAAATAATGC-----------------------------CCATCCAGGCGATGACGAACATGCTGCGGGAG
droBip1 scf7180000395962:111214-111331 + CGACCGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGCTTTCGGTTTTCATA----GT-------TTA------CG------GCTTGC-------ATTT----CATGTTTT-------------------ATTACTTCC-------------CCCC---------------------------ACAGTGCCGCCGAAAATAATGC-----------------------------CCATCCAGGCGATGACGAACATGCTGCGGGAG
dp5 XL_group3a:1356655-1356818 - TCGCACGCACT-----CTTTGTCGTGTTGTTCAATA-TTAGCGGCGTCTGC---------CGG-A-------------------------------------------------------------------------------------------------------------------------------------G-------GAGAGCCATACTGACTTAGTATCGGGTATAAGTGTAGAGTTGCGG-T----GCCCGCAGCAACTCACAACGTTCCCCCTCGTT-TGGTT-----------TG------AT--------------------------------------------------------------------G-----------CTGTGG------------TTT---------TTA---------------CTGACTTTTG---------------------------------------GTT---------T
droPer2 scaffold_23:49327-49435 - TTGCATGGTTT------ATGGGTTTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG----GT-------TTA------TG------GTTTCC-------T-------C--------------------------ATGGATTCA-------------TCCC------------ATC-----------CACAGTGCCACCGAAAATTATGC-----------------------------CCATCCAGGCGATGACGAACATGCTGCGAGAG
droWil2 scf2_1100000004620:258639-258771 + TTAATAGACGCGCAGATATTGACTATTTAAAAAT---TTTGCCACGCCCATTTCCGCCCC-----------------------------------------------------------CGAAAATTAA-------------------------------------------------------ACAAAACTGA-T--T-------TTCTCGAAAACTAACAGAGTTAAAGTCACCAA---ATT----------------------------TAGTATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACTGG----------ATT---------A
droVir3 scaffold_13049:2535918-2536129 - ATGCCCACACC-----CACGC--------------------------CCAC---------ACGCC------------------------------------------------------TTGATAATCA----GTAT-------------------------------------------------------GG-CTTT-------TGTGCTTAAGCCAACTTGGCAATTGTTATGAG---T-----------------------------------TTCTCTTTTCAT-GTATT----------TTG------CT------TTTGG-------------------TTGCCTAATGATATGTTGAATGT-ATGTTTATGCTCTGTCCACACTTGCC------------ACT-----------TGCAGTGCCACCAAAAATCATGC-----------------------------CCATTCAGGCCATGACGAATATGCTGCGCGAG
droMoj3 scaffold_6500:5574142-5574246 + G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGATCTC---GTAGTCGAGCAG----TCTCG------ACTAGAGCTTTCTTACTTGTT-ATATT-----------TA------TG------TTTTTT-------TTTT----CTTTTTTT-------------------TTTTTTTTT-------------GTTC------------GGTCAAG---------T-----------------------------------------------------------------------AGTACAGGCG
droGri2 scaffold_15126:8342366-8342505 + TTGAAAAGTAA----------TTTTGCATGGTATTTCTTGGCTAAGCCAACCC-AATCTT-----------------------------------------------------------TGCTAA-------------------------------CTG------------------------TTGTCAGCTGG-TATTACTTATGGTATCAA-----------------AACATTTC---GCAGTCGGTTCC----GCCCG------ACTGCAACGTTCTCTCTTGTT-TAATA-----------TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TTGAAAATTTC-----TATCGATTTGCAAAAAATCTTTTTGCCACGCCCACTCTAACGCC-----------------------------------------------------------CACAAA-------------------------------CCG------------------------CCAAAAACTGT-CCTT-------CGCACTTACACTAGCTGAGTAACGGGTATCAG---ATAGTCGGGG-A----ACTCG------ACTATAGCGTTCTCTCTTGTT-TGGTT-----------TA------CGACT---GTTGT-------TGTTT----CATGTTTT-------------------ATGGCTTCC-------------TTCC------------GATGGTG---------CAGTGCCGCCGAAAATTATGC-----------------------------CCATCCAGGCCATGACGAACATGCTCCGCGAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................TCGATTTGCAAAAAATCTTTTTGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15300300000000
...........................................................................................................................AA-------------------------------CCG------------------------CCAAAAACTGT-CCTT-------C...........................................................................................................................................................................................................................................................................................................21200.10202000000000
.............................AAAATCTTTTTGCCACGCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
................................ATCTTTTTGCCACGCCCACTCTAACGCC-----------------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000000000
....................................................................................................................................................................................................CTT-------CGCACTTACACTAGCTGAG.........................................................................................................................................................................................................................................................................................22200.05100100000000
droEre2
GTGTAAATTTC-----TATAGACTTGCCAAAAAATG-TTTTGCACGCCCAC---------AAA-ACGACCA------AAA----------------------------------CTCTC-----------------ACGCCCTCTCTTCCCC---------CAAATTT------------------------CT-CGTT-------TGCACTTCCACTAGCTGAGTAACGGGTATCTG---ATAGTCGGGG-A----ACTCA------ACTGTAGCATTCTATATTTTT-GTATT----------TTA------TA------TTTGC--------------------------------------------------------TG-----------TTCCAG------------TTT---------CTA---------------TCTATTTTGGCCACGACGCTTACAAC-CGC--------------CAAAAACT---------ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................TAGCTGAGTAACGGGTATCTG---AT.......................................................................................................................................................................................................................................................................23201.252500000025
.............................................................................................................................................................................................................................TGAGTAACGGGTATCTG---ATAGTCGGG................................................................................................................................................................................................................................................................26201.152300000023
.............................................................................................................................................................................................................................TGAGTAACGGGTATCTG---ATAGTCGG.................................................................................................................................................................................................................................................................25200.801600000016
............................................................................................................................................................................................................................................TG---ATAGTCGGGG-A----ACTCA------ACT...........................................................................................................................................................................................................................................21180.0611000000
...................................................................................................................................................................................................................TTCCACTAGCTGAGTAACGGG..................................................................................................................................................................................................................................................................................21200.0510001000
droSec2
TTGTGAATTTC-----TGTCGACATGCA-----------------------------------------------TTAATTTTTTTCTCATTTTAATCCTCAACATCTATCGATATCCCAGAAAAATTATGAAATA--------------------------------------------------------------T-------CGCATTCACACTAGCTGAGTAACGGGTATCTG---ATAGTCGG----------------------ATAGCATTCTCTGTTGTT-TTTTT-----------TT------T------------------------GTATT------------------------------------TGCGT-----------TGCCTGCCTTTTTGTGATACGCTGCTGGC-------------CCCGAGC-----------------------------CTGTTCTGGCCACAA-----------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................TTCACACTAGCTGAGTAACGG...................................................................................................................................................................................................................................................................................21200.4086101
..................................................................................................................................................................................................................TTCACACTAGCTGAGTAACGGGT.................................................................................................................................................................................................................................................................................23200.2040040
....................................................................................................................................................................................................................CACACTAGCTGAGTAACGG...................................................................................................................................................................................................................................................................................19200.0510010
.................................................................................................................................................................................................................ATTCACACTAGCTGAGTAACGGGT.................................................................................................................................................................................................................................................................................24200.0511000
droSim2
CTGTGAATTTC-----TATCGACATGCA-----------------------------------------------TCAATTTTTTTCTCATTTTAATCACCAACATCTTTCGATATCCCAGAAAAATTATGAAATA--------------------------------------------------------------T-------CGCATTCACACTAGCTGAGTAACGGGTATCTG---ATAGTCGG----------------------ATAGCATTCTCTCTTGTT-TTTTT-TTTTTTTTTTT-------T------------------------GTATT------------------------------------TGCGT-----------TGCCTGCCTTTTTGTGATACGCTGCTGGC-------------CCCGAGC-----------------------------CTGTTCTGGCCACAA-----------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................CGATATCCCAGAAAAATTATGAAATA--------------------------------------------------------------....................................................................................................................................................................................................................................................................................................................26111.001100000030800000000
.............................................................................................................................................................................................................................TGAGTAACGGGTATCTG---ATAGTCGG----------------------A..........................................................................................................................................................................................................................................26207.701540000007806907000000
.............................................................................................................................................................................................................................TGAGTAACGGGTATCTG---ATAGTCGG----------------------AT.........................................................................................................................................................................................................................................2735.331600000350301040000
...................................................................................................................TCCCAGAAAAATTATGAAATA--------------------------------------------------------------T-------CGCA........................................................................................................................................................................................................................................................................................................2615.00500000010400000000
............................................................................................................................................................................................................................................................................................................TTTTTTT-------T------------------------GTATT------------------------------------TGCGT-----------TGCCTGC.......................................................................................................2513.00300300000000000000
..........................................................................................................................................................................................................................................TCTG---ATAGTCGG----------------------ATAGCATTCTCTC..............................................................................................................................................................................................................................2513.00300000010200000000
.................................................................................................................................................................................................................ATTCACACTAGCTGAGTAACGGGT.................................................................................................................................................................................................................................................................................24202.7555000000055000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTTTTGTGATACGCTGCTGG..................................................................................2412.00200000010100000000
................................................................................................TCACCAACATCTTTCGATATCCCAGA................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000200000000
................TATCGACATGCA-----------------------------------------------TCAATTTTTTTCTCA................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000200000000
...................................................................................................................TCCCAGAAAAATTATGAAATA--------------------------------------------------------------T-------CGCATT......................................................................................................................................................................................................................................................................................................2812.00200000020000000000
.................................................................................................................................TGAAATA--------------------------------------------------------------T-------CGCATTCACACTAGCTGA..........................................................................................................................................................................................................................................................................................2611.00100000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTTTTGTGATACGCTGCT....................................................................................2211.00100000000100000000
.TGTGAATTTC-----TATCGACATGCA-----------------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000100000000
......................................................................................................................CAGAAAAATTATGAAATA--------------------------------------------------------------T-------CGCATT......................................................................................................................................................................................................................................................................................................2511.00100000010000000000
..........................................................................................................................................................................................................................................TCTG---ATAGTCGG----------------------ATAGCATTCTCTCT.............................................................................................................................................................................................................................2611.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGATACGCTGCTGGC-------------CCCGAGC-----------------------------................................2611.00100000010000000000
...............................................................................TTTTTTTCTCATTTTAATCACCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
........TTC-----TATCGACATGCA-----------------------------------------------TCAATTTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
.............................................................................................................................................................................................................................................................................................................TTTTTT-------T------------------------GTATT------------------------------------TGCGT-----------TGCCTGCC......................................................................................................2511.00100100000000000000
.............................................................................................................................................................................................................................................G---ATAGTCGG----------------------ATAGCATTCTCTCTT............................................................................................................................................................................................................................2411.00100000000100000000
......................................................................................................................................................................................................................................GGTATCTG---ATAGTCGG----------------------ATAGC......................................................................................................................................................................................................................................2111.00100000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TACGCTGCTGGC-------------CCCGAGC-----------------------------CTGTTCTG........................2711.00100000000100000000
..............................................................................................................................TTATGAAATA--------------------------------------------------------------T-------CGCATTCACACTAGC.............................................................................................................................................................................................................................................................................................2611.00100000010000000000
.............................................................................................................TCGATATCCCAGAAAAATTATGAAATA--------------------------------------------------------------....................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
....................................................................................................................CCCAGAAAAATTATGAAATA--------------------------------------------------------------T-------CGCA........................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.................................................................................................................TATCCCAGAAAAATTATGAAATA--------------------------------------------------------------T-------CGCA........................................................................................................................................................................................................................................................................................................2811.00100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGCCTTTTTGTGATACGCTG......................................................................................2411.00100000000001000000
..................................................................................................................................................................................................................................AACGGGTATCTG---ATAGTCGG----------------------ATAGCA.....................................................................................................................................................................................................................................2611.00100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGATACGCTGCTGGC-------------CCCGA...............................................................2611.00100000000100000000
....................................................................................................................................................................................................................................................................................................................................................TATT------------------------------------TGCGT-----------TGCCTGCCTTTTTGTGA.............................................................................................2611.00100000000100000000
................................................................................................................................................................................................................................................................................................................TTT-------T------------------------GTATT------------------------------------TGCGT-----------TGCCTGCCTT....................................................................................................2411.00100000000001000000
...............................................................................................................................................................................................................................................................................................................TTTT-------T------------------------GTATT------------------------------------TGCGT-----------TGCCTGCCTT....................................................................................................2511.00100000000001000000
........TTC-----TATCGACATGCA-----------------------------------------------TCAATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGC-------------CCCGAGC-----------------------------CTGTTCTGGC......................2411.00100000000100000000
..............................................................................................................CGATATCCCAGAAAAATTATGAAAT...................................................................................................................................................................................................................................................................................................................................................................................25200.501000000050005000000
.........................................................................................................................................................................................................................TAGCTGAGTAACGGGTATCTG---AT.......................................................................................................................................................................................................................................................................23200.35700000000040030000
......................................................................................................................................................................................................................CACTAGCTGAGTAACG....................................................................................................................................................................................................................................................................................16200.35700000000007000000
.............................................................................................................................................................................................................................TGAGTAACGGGTATCTG---ATAGTCGG----------------------ATA........................................................................................................................................................................................................................................2830.33100000010000000000
...............................................................................................................................................................................................................GCATTCACACTAGCTGAGTAACGG...................................................................................................................................................................................................................................................................................24200.30600000000006000000
.............................................................................................................................................................................................................................TGAGTAACGGGTATCTG---ATAGTCGG----------------------ATT........................................................................................................................................................................................................................................2840.25100000010000000000
.............................................................................................................................................................................................................................TGAGTAACGGGTATCTG---ATAG.....................................................................................................................................................................................................................................................................21200.15300000000000003000
.............................................................................................................................................................................................................................TGAGTAACGGGTATCTG---ATAGTCGG----------------------...........................................................................................................................................................................................................................................25200.15300000000030000000
.........................................................................................................................................................................................................................TAGCTGAGTAACGGGTATCTG---ATAGTC...................................................................................................................................................................................................................................................................27200.15300000000003000000
..............................................................................................................CGATATCCCAGAAAAATTATGAAA....................................................................................................................................................................................................................................................................................................................................................................................24200.15300000000020010000
................................................................................................................................................................................................................................GTAACGGGTATCTG---ATA......................................................................................................................................................................................................................................................................17200.15300000000003000000
...........................................................................................................................................................................................................................GCTGAGTAACGGGTATCTG---ATAGTCGG----------------------A..........................................................................................................................................................................................................................................28180.11200000001100000000
.............................................................................................................................................................................................................................TGAGTAACGGGTATCTG---ATAGTCGG----------------------AA.........................................................................................................................................................................................................................................27200.10200000000200000000
............................................................................................................................................................................................................................CTGAGTAACGGGTATCTG---ATAGTCGG----------------------A..........................................................................................................................................................................................................................................27200.10200000000200000000
..............................................................................................................CGATATCCCAGAAAAATTATGAA.....................................................................................................................................................................................................................................................................................................................................................................................23200.10200000020000000000
..................................................................................................................................................................................................................TTCACACTAGCTGAGTAACGGGTA................................................................................................................................................................................................................................................................................24200.10200000000000002000
..................................................................................................................................................................................................................TTCACACTAGCTGAGTAACGGGTAT...............................................................................................................................................................................................................................................................................25200.10200000002000000000
...................................................................................................................................................................................................................TCACACTAGCTGAGTAACGGGTATC..............................................................................................................................................................................................................................................................................25200.05100010000000000000
..................................................................................................................................................................................................................TTCACACTAGCTGAGTAACGGG..................................................................................................................................................................................................................................................................................22200.05100010000000000000
..................................................................................................................................................................................................................TTCACACTAGCTGAGTAACGG...................................................................................................................................................................................................................................................................................21200.05100000000010000000
.................................................................................................................................................................................................................ATTCACACTAGCTGAGTAACGGGTA................................................................................................................................................................................................................................................................................25200.05100000000010000000
................................................................................................................................................................................................................................................................................TAGCATTCTCTCTTGTT-T.......................................................................................................................................................................................................................18200.05100000000001000000
.............................................................................................................................................................................................................................TGAGTAACGGGTATCTG---A........................................................................................................................................................................................................................................................................18200.05100000010000000000
.........................................................................................................................................................................................................................................ATCTG---ATAGTCGG----------------------ATTC.......................................................................................................................................................................................................................................17200.05100000000001000000
......................................................................................................................................................................................................T-------CGCATTCACACTAGCTGAGTAACGGGTA................................................................................................................................................................................................................................................................................29200.05100000000100000000
................................................................................................................................................................................................................................................................................................T-TTTTT-TTTTTTTTTTT-------T------------------------.......................................................................................................................................................................18200.05101000000000000000
..............................................................................................................................................................................................................CGCATTCACACTAGCTGAGTAACGGGTA................................................................................................................................................................................................................................................................................28200.05100000000100000000
......................................................................................................................................................................................................................CACTAGCTGAGTAACGGGTATCTG---A........................................................................................................................................................................................................................................................................25200.05100000010000000000
...............................................................................................................................................................................................................GCATTCACACTAGCTGAGTAACGGGTA................................................................................................................................................................................................................................................................................27200.05100000000100000000
..............................................................................................................................................................................................................................GAGTAACGGGTATCTG---ATAGTCGG----------------------A..........................................................................................................................................................................................................................................25200.05100000010000000000
dm3
TTGTAAATTTC-----TATCGATTTGCCAAAAAATT-TTTGCCGCGCCCAC---------AATTTTGAACAATTTTTAAATTTGTTCTCATTTTATTCCC------------------------------------------------------------------------------------------------CTT-------TGCATTCACACTAGCTAAGTAACGGGTATCTG---ATAGTCGGGG-A----ACTCG------ACTATAGCATACACTCTTGTT-TTTAA-TTAAATTTAT-AATACCTCTATTGTT-----------------TTAGT------------------------------------TACGT-----------TTTTCATCT---AATTGTT---------CAATTCTACCG-----------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................TATCTG---ATAGTCGGGG-A----ACTCG------ACTA..........................................................................................................................................................................................................................................262018.503700000000000000000000000000000000000000000000200000002200000000000000000000000001700000000000000000000000000000000000000000000000000020001907200000030000120000000000000000000000000000000000000010000000101000710600000000090000012000000000000000000000000000000000000000000000000000000000000000000000000002070000030000000000000000000000000
.............................................................................................................................................................................................................................TAAGTAACGGGTATCTG---ATAGTCGGG................................................................................................................................................................................................................................................................261611.881900000000000000000000000000000000000000000100000102000100000000000000000000000000000000010000000000000000000000000000000000000000000000040000002400201100110000000000000000000000000000000000000300000000000102000000000000020040201438000000000000200000000000000000000000000000000000000000000000200000791201000020330000000000000011122000000
.............................................................................................................................................................................................................................TAAGTAACGGGTATCTG---ATAGTCGG.................................................................................................................................................................................................................................................................25169.941590000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000004000000102300002110050000000000000000000000000000000000000000001000000024000000000000121015030152110000000000000000000000000000000000000000000000000000000000000000021110000001015000000000000002401000000
........................................................................................................................................................................................................................................TATCTG---ATAGTCGGGG-A----ACTCG------A.............................................................................................................................................................................................................................................23206.6513300000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000110000001000000000000000000000000000000000000002102000000000002004000400000000040000000000000000000000000000000000000000000000000000000000000000024000048000000000000000000000181900000000
.................................................................................................................................................................................................................................TAACGGGTATCTG---ATAGTCGGGG-A----AC.......................................................................................................................................................................................................................................................26206.6513300000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000002000000000000000000000000000000000000000000000000644380000000000000000000110600000000000000000000000000000000000000000000000000000000000020000001000100001003000000000000002030100000
.............................................................................................TATTCCC------------------------------------------------------------------------------------------------CTT-------TGCATTCACACTAGC.............................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TCG------ACTATAGCATACACTCTTGTT-TT......................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTC-----TATCGATTTGCCAAAAAATT-TTTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000
..........................................................................................................................................................................................................................................TCTG---ATAGTCGGGG-A----ACTCG------A.............................................................................................................................................................................................................................................21203.95790000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000200000000000000000000000000000000000000020000020000000000000020070000001010100000000000000000000000000000000000000000000000000000000100000000000000009019000001300000000000000000140000000
........................................................................................................................................................................................................................................TATCTG---ATAGTCGGGG-A----ACTCG------AC............................................................................................................................................................................................................................................24203.8076000000000000000000000000000000000000000000000002000000000000000000000000000000037000000000000000000000000000000000000000000000000000000000030000002000000030000000000000000000000000000000000000030000040000000000000000000000001500000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000600000000
.............................................................................................................................................................................................................................TAAGTAACGGGTATCTG---ATAGTC...................................................................................................................................................................................................................................................................23203.25650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505004100010000000000000000000000000000000000110102002000000000000020000000840000340000000000000000000000000000000000000000000000000000000000000000003600000000800000000000000001120000000
........................................................................................................................................................................................................................................TATCTG---ATAGTCGGGG-A----ACTC.....................................................................................................................................................................................................................................................21203.256500000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000003560000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTCG------ACTATAGCATACACTCTTGTT-TT......................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTCG------ACTATAGCATACACTCTTGTT-T.......................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TCG------ACTATAGCATACACTCTTGTT-TTT.....................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TT-------TGCATTCACACTAGCTAAGTAACGGG..................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TAAATTTC-----TATCGATTTGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21202.8056000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163800000000000000000000000000000000000000000000000200000000
..................................................................................................................................................................................................................................................TAGTCGGGG-A----ACTCG------ACTA..........................................................................................................................................................................................................................................19202.254500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000044000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TATAGCATACACTCTTGTT-TTTAA-TT................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TTTAT-AATACCTCTATTGTT-----------------TTAGT------------------------------------..............................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................T-------TGCATTCACACTAGCTAAGTAACGGG..................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................A----ACTCG------ACTATAGCATACACT...............................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TCG------ACTATAGCATACACTCTTGTT-T.......................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................AATACCTCTATTGTT-----------------TTAGT------------------------------------T.............................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................A----ACTCG------ACTATAGCATACACTCTTGT..........................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TAA-TTAAATTTAT-AATACCTCTATTGTT-----------------.......................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TCTG---ATAGTCGGGG-A----ACTCG------ACTA..........................................................................................................................................................................................................................................24201.903800000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001002000000000000000000000000000000000000000000000017000003000000000600040000200000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................GGTATCTG---ATAGTCGGGG-A----AC.......................................................................................................................................................................................................................................................21201.903800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000700000
.............................................................................................................................................................................................................................TAAGTAACGGGTATCTG---ATAGTCGGGG-..............................................................................................................................................................................................................................................................27121.83220000000000000000000000000000000000000020000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000100000000000000000000000000000000000000000000000000000000000000000000000000000000201330000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000321000000
.............................................................................................................................................................................................................................TAAGTAACGGGTATCTG---ATAGTCG..................................................................................................................................................................................................................................................................24201.30260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010100000000000000000000000000000000000000001000000000002000004000000110402030000000000000000000000000000000000000000000000000000000000000001000000000000101000000000000000101000000
.................................................................................................................................................................................................................................TAACGGGTATCTG---ATAGTCGGGG-A----.........................................................................................................................................................................................................................................................24201.20240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000007600100000000000000000000000000000000000000000000000000000000000000000010000000600000000000000000000100000
.......................................................................................................................................................................................................................................GTATCTG---ATAGTCGGGG-A----AC.......................................................................................................................................................................................................................................................20201.2024000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000010011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................TATCTG---ATAGTCGGGG-A----ACTCG------ACT...........................................................................................................................................................................................................................................25201.05210000000000000000000000000000000000000000000010000000000000000000000000000000020000000000000000000000000000000000000000000000000000001000000000000000300000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000610000000000000001000000000
....................GATTTGCCAAAAAATT-TTTGCCGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TAAATTTAT-AATACCTCTATTGTT-----------------T......................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TGCATTCACACTAGCTAAGTAACGGG..................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................TTTTATTCCC------------------------------------------------------------------------------------------------CTT-------TGCATTCACACTAG..............................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CAC---------AATTTTGAACAATTTTTAAATT........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TCG------ACTATAGCATACACTCTTGTT-TTTAA-..................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................AATTTTGAACAATTTTTAAATTTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TCG------ACTATAGCATACACTCTTGT..........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TAGCATACACTCTTGTT-TTTAA-TTAAA.............................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................ACTCG------ACTATAGCATACACTCTTGT..........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TATAGCATACACTCTTGTT-TTTAA-T.................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TAGT------------------------------------TACGT-----------TTTTCATCT---AATTGTT---------C.................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TAA-TTAAATTTAT-AATACCTCTATTGT.........................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCATCT---AATTGTT---------CAATTC............................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................G-A----ACTCG------ACTATAGCATACACTCTTG...........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTAAATTTAT-AATACCTCTATTGTT-----------------T......................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTTTCATCT---AATTGTT---------CAATTCTACCG-----------------------------------------------------------------------2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TTGCCGCGCCCAC---------AATTTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AA-TTAAATTTAT-AATACCTCTATTGT.........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GCGCCCAC---------AATTTTGAACAATTTTTA............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TCTCATTTTATTCCC------------------------------------------------------------------------------------------------CTT-------TGCATT......................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................ACTCG------ACTATAGCATACACTCTTGTT-T.......................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................T-----------TTTTCATCT---AATTGTT---------CAATTCTACC........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TTTAT-AATACCTCTATTGTT-----------------TTAGT------------------------------------TACG..........................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................ACTCG------ACTATAGCATACACTC..............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..................................TT-TTTGCCGCGCCCAC---------AATTTTGAACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................T-----------TTTTCATCT---AATTGTT---------CAATTCTAC.........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTCG------ACTATAGCATACACTCT.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTGCCAAAAAATT-TTTGCCGCGCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTC-----TATCGATTTGCCAAAAAATT-TTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TTTATTCCC------------------------------------------------------------------------------------------------CTT-------TGCATTCACACTAGA.............................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................ATACCTCTATTGTT-----------------TTAGT------------------------------------TACGT-----------T.............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TCG------ACTATAGCATACACTCTTGTT-........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................CTATAGCATACACTCTTGTT-TTTAA-T.................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CGGGG-A----ACTCG------ACTATAGCATACAC................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTC-----TATCGATTTGCCAAAAAATT-TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTCG------ACTATAGCATACACTCTTGTT-........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTCG------ACTATAGCATACACTCTTGT..........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCGATTTGCCAAAAAATT-TTTGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................G-A----ACTCG------ACTATAGCATACACTCTTGT..........................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TTGCCGCGCCCAC---------AATTTTGAACAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................................................................................................................................................GCATTCACACTAGCTAAGTAACGGGTA................................................................................................................................................................................................................................................................................2770.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................ACACTAGCTAAGTAACGGG..................................................................................................................................................................................................................................................................................1980.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................................................................................................................................CACACTAGCTAAGTAACGG...................................................................................................................................................................................................................................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................................GGGTATCTG---ATAGTCGGGG-A----AC.......................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................GGGTATCTG---ATAGTCGGGG-A----ACT......................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
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TTGTAAATTTC-----TATCGATTTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................................................................................................................................AAGTAACGGGTATCTG---ATAGTCGGGG-..............................................................................................................................................................................................................................................................26130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CACTAGCTAAGTAACGGGTATC..............................................................................................................................................................................................................................................................................22130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CACTAGCTAAGTAACGGGTATCTG---A........................................................................................................................................................................................................................................................................25130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droEug1
ACTGGGTTTTG-----TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAAGCCAACTGCCATGGCAATTGTTAGCCG---GTTTTCGCGA-C----ACTCA------ACG------TTTTTGCCCGCC-GAATG-TTTTTCGGTTTA------CG------GTTTG-------TGTTT----CATGTTTT-------------------ATGGCTTCC-------------TTCC------------GAT-----------TACAGTGCCTCCGAAAATTATGC-----------------------------CCATCCAGGCCATGACGAACATGCTTCGCGAASizeHit CountTotal NormTotal
No Reads
droBia1
AATACA----------TATTGACTCACCAAAAACA--GGTGCCACGCCGGT---------AGG-TGGAGCA---------------------------------------------------------ATAAAATATCGCT-TTTCTGCTTATAAATTTTCATTATCC----------------------------CTT-------T--GTTCCCTTAAGCTGAGTAATGGGTA--------TAGTCGAGG-C----GCTCG------ACTATAGCGTTCCTCCCTGTT-GTGTA-----------TA------TT------TTGGT--------G-------C------------------------------------TGCGTCACCACTTAG-----AGATTTTTTAGGACTTAGTGCTAAG-------------ACTACAA------------------------C-TGCACGCATTGGACACGAAGAAAATG---------SizeHit CountTotal NormTotal
No Reads
droTak1
AAAAATTATAT------AT-------------------------------------------------------------------------------------------CTATCTCCC-----------------TCGCACTCCCTTTAGC---------TGAGTTACGATTATTAGCTGGGACACCAACCCG-CGTT-------CGCACTTCTTTTAGCTGAGTGACGGGTATTAG---ATAGTCGGGA-CAACAACCCG------ACTATAGCGTTCTCTCTTGTT-TTTTTAAC-------ACA------TA------GTTGT--------------------------------------------------------TC-----------TGCTA------------AG---------TTGCA---------------TTTTCAAAAGTTGCATTGCTAACTTTATGCACAT----------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
G----------------------------------------CCACGCCCACTCTAACTCC-----------------------------------------------------------TAAAAAATCGCG-------------------------------AAATTT------------------------CTGGGTT-------TTCAAATTGGTTAACTGAGTAACGGGTGTCTA---AAAGTCGAGG-A----ACTCG------ACTATATCGTTTCTTCTTGTT-TGATT-----------TA------TA------TTATT--------TTTT----C------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATCAACGTTTC-----TATCT-----------------------------------------------------------------------------------------CCATCTC-------------------------------------------------------------------------------CCT-------CGCACTCCCTTTACCTAAGTAACGGGTATCTG---ATAGTCGGGG-C----ACCCG------ACTATAGCGTTCTCTCTTGTT-AGGAA-----------TG------TT------TTTGG-------------------TAATTGCAAAGTCTATTAAATCGGGTAGTTTCC-------------TTC-------------------------------GGTCTGCCGGCCATTATGT-----------------------------TCGTCT--GCCAGGAGAAACATAGTCC-----SizeHit CountTotal NormTotal
No Reads
droFic1
AAGCATT------------------------------TGTGCCACGCTCACTATTACGCA-----------------------------------------------------------CACCAC-------------------------------CCT------------------------ATGGGGCGTAT-CA-T-------CTCCTATTGTTTAATTGAGGAATGGGTATCTG---ATAGTCGATG-C----ACTAG------ACTATAGCGATCTCTCTTATT-TGATT-----------TT------AT---------------------TT----CGGTTTTT-------------------GTAGCCT---------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG------CG------GCTTG-------TGTCT----GATGCTTT-------------------ATGGCTTCC-------------GT------------TTT-T-----------CGCAGTGCCACCGAAAATCATGC-----------------------------CCATCCAGGCCATGACGAACATGCTCCGCGAGSizeHit CountTotal NormTotal
No Reads
droAna3
TTTTGGCTTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-TG----GT-------TTA------CG------GCTTGCATTTCATGTTT----GATGTTTT-------------------ATTACTTCC-------------CCCC--------------------------AACAGTGCCGCCGAAAATAATGC-----------------------------CCATCCAGGCGATGACGAACATGCTGCGGGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CGACCGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGCTTTCGGTTTTCATA----GT-------TTA------CG------GCTTGC-------ATTT----CATGTTTT-------------------ATTACTTCC-------------CCCC---------------------------ACAGTGCCGCCGAAAATAATGC-----------------------------CCATCCAGGCGATGACGAACATGCTGCGGGAGSizeHit CountTotal NormTotal
No Reads
dp5
TCGCACGCACT-----CTTTGTCGTGTTGTTCAATA-TTAGCGGCGTCTGC---------CGG-A-------------------------------------------------------------------------------------------------------------------------------------G-------GAGAGCCATACTGACTTAGTATCGGGTATAAGTGTAGAGTTGCGG-T----GCCCGCAGCAACTCACAACGTTCCCCCTCGTT-TGGTT-----------TG------AT--------------------------------------------------------------------G-----------CTGTGG------------TTT---------TTA---------------CTGACTTTTG---------------------------------------GTT---------TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................AACTCACAACGTTCCCCCTCG...........................................................................................................................................................................................................................21202.505005000000000
......................................TAGCGGCGTCTGC---------CGG-A-------------------------------------------------------------------------------------------------------------------------------------G-------GAGA........................................................................................................................................................................................................................................................................................................22200.551101100000000
..........T-----CTTTGTCGTGTTGTTCAATA-TTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000010
.....................................................................................................................................................................................................................................................................GCAGCAACTCACAACGTTCCCCCT.............................................................................................................................................................................................................................24200.3570700000000
......................................................................................................................................................................................................................................................TGCGG-T----GCCCGCAGCAACTCACAACGT....................................................................................................................................................................................................................................2740.2510100000000
...................................................................................................................................................................................................................................................................CCGCAGCAACTCACAACGTTCCCCC..............................................................................................................................................................................................................................25200.2040400000000
..........................................................................................................................................................................................................................GACTTAGTATCGGGTATAAGT...........................................................................................................................................................................................................................................................................2160.1710000001000
................................................................................................................................................................................................................................GTATCGGGTATAAGTGTAGAG.....................................................................................................................................................................................................................................................................21200.1530000000300
.........................................................................................................................................................................................................................TGACTTAGTATCGGGTATAAG............................................................................................................................................................................................................................................................................2170.1410000100000
...............................................................................................................................................................................................................................................GTAGAGTTGCGG-T----GCCCGC...................................................................................................................................................................................................................................................1990.1110000010000
...............................................................................................................................................................................................................................................GTAGAGTTGCGG-T----GCCCGCA..................................................................................................................................................................................................................................................2090.1110100000000
..................................................................................................................................................................................................................................ATCGGGTATAAGTGTAGAGT....................................................................................................................................................................................................................................................................20200.1020000000020
................................................................................................................................................................................................................GAGCCATACTGACTTAGTATCG....................................................................................................................................................................................................................................................................................22200.1020200000000
...................................................................................................................................................................................................................................TCGGGTATAAGTGTAGAGTTGCG................................................................................................................................................................................................................................................................23140.0710000000100
....................................................................................................................................................................................................................................CGGGTATAAGTGTAGAGTTGC.................................................................................................................................................................................................................................................................21150.0710000000001
....ACGCACT-----CTTTGTCGTGTTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.0610100000000
.....CGCACT-----CTTTGTCGTGTTGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21170.0610100000000
......................................................................................................................................................................................................................................................TGCGG-T----GCCCGCAGCAACTCACA........................................................................................................................................................................................................................................23180.0610100000000
............................GTTCAATA-TTAGCGGCGTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
..............................TCAATA-TTAGCGGCGTCTGC---------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.............................TTCAATA-TTAGCGGCGTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010000000
................................................................................................................................................................................................................................GTATCGGGTATAAGTGTAGA......................................................................................................................................................................................................................................................................20200.0510100000000
...............................CAATA-TTAGCGGCGTCTGC---------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
droPer2
TTGCATGGTTT------ATGGGTTTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG----GT-------TTA------TG------GTTTCC-------T-------C--------------------------ATGGATTCA-------------TCCC------------ATC-----------CACAGTGCCACCGAAAATTATGC-----------------------------CCATCCAGGCGATGACGAACATGCTGCGAGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TTAATAGACGCGCAGATATTGACTATTTAAAAAT---TTTGCCACGCCCATTTCCGCCCC-----------------------------------------------------------CGAAAATTAA-------------------------------------------------------ACAAAACTGA-T--T-------TTCTCGAAAACTAACAGAGTTAAAGTCACCAA---ATT----------------------------TAGTATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACTGG----------ATT---------ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................TAACAGAGTTAAAGTCACCAA---ATT----------------------------TAG.......................................................................................................................................................................................................................................27200.6012000120
.................................................................................................................................................................................................................TCGAAAACTAACAGAGTTAAAGTCACC..............................................................................................................................................................................................................................................................................27200.5010000100
...............................................................................................................................................................................................................TCTCGAAAACTAACAGAGTTAAAGT..................................................................................................................................................................................................................................................................................25200.35700070
.................................................................................................................................................................................................................TCGAAAACTAACAGAGTTAAAGTCA................................................................................................................................................................................................................................................................................25200.30600060
.................................................................................................................................................................................................................TCGAAAACTAACAGAGTTAAAGTCACCA.............................................................................................................................................................................................................................................................................28200.15300030
...............................................................................................................................................................................................TGA-T--T-------TTCTCGAAAACTAACAGAGT........................................................................................................................................................................................................................................................................................25200.15300030
...........................................ACGCCCATTTCCGCCCC-----------------------------------------------------------CGAA...............................................................................................................................................................................................................................................................................................................................................................................................21200.10202000
...............................................................................................................................................................................................................TCTCGAAAACTAACAGAGTTAAAG...................................................................................................................................................................................................................................................................................24200.10200020
...........................................ACGCCCATTTCCGCCCC-----------------------------------------------------------CGA................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000
...................................................................................................................................................................................................T--T-------TTCTCGAAAACTAACAGAGTTAAAGT..................................................................................................................................................................................................................................................................................28200.05100010
....................................................................................................................................................................................................................AAAACTAACAGAGTTAAAGTCA................................................................................................................................................................................................................................................................................22200.05100010
........................................GCCACGCCCATTTCCGCCCC-----------------------------------------------------------CGAAAAT............................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
..........................................CACGCCCATTTCCGCCCC-----------------------------------------------------------CG.................................................................................................................................................................................................................................................................................................................................................................................................20200.05100001
..................................................TTTCCGCCCC-----------------------------------------------------------CGAAAATTAA-------------------------------------------------------ACAAAAC...........................................................................................................................................................................................................................................................................................................................27200.05101000
..................................................................................................................................................................................................................CGAAAACTAACAGAGTTAAAGTCACCA.............................................................................................................................................................................................................................................................................27200.05100010
..................................................................................................................................................................................................................................TAAAGTCACCAA---ATT----------------------------TAGTATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G.............................24200.05101000
...............................................................................................................................................................................................................TCTCGAAAACTAACAGAGTTAAAGTCA................................................................................................................................................................................................................................................................................27200.05100010
...................................................................................................................................................................................................................GAAAACTAACAGAGTTAAAGTCACCAA---A........................................................................................................................................................................................................................................................................28200.05100010
.TAATAGACGCGCAGATATTGACTAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100001
..................................................................................................................................................................................................................CGAAAACTAACAGAGTTAAAGTCACC..............................................................................................................................................................................................................................................................................26200.05100010
.....AGACGCGCAGATATTGACTATTTAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
..........................................................................................................................................................................................................................AACAGAGTTAAAGTCACCAA---ATT----------------------------TAGTA.....................................................................................................................................................................................................................................28200.05100010
TTAATAGACGCGCAGATATTGACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...................TGACTATTTAAAAAT---TTTGCCACGCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
..............................................................................................................................................................................................................TTCTCGAAAACTAACAGAGTTAAAGT..................................................................................................................................................................................................................................................................................26200.05100010
droVir3
ATGCCCACACC-----CACGC--------------------------CCAC---------ACGCC------------------------------------------------------TTGATAATCA----GTAT-------------------------------------------------------GG-CTTT-------TGTGCTTAAGCCAACTTGGCAATTGTTATGAG---T-----------------------------------TTCTCTTTTCAT-GTATT----------TTG------CT------TTTGG-------------------TTGCCTAATGATATGTTGAATGT-ATGTTTATGCTCTGTCCACACTTGCC------------ACT-----------TGCAGTGCCACCAAAAATCATGC-----------------------------CCATTCAGGCCATGACGAATATGCTGCGCGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGATCTC---GTAGTCGAGCAG----TCTCG------ACTAGAGCTTTCTTACTTGTT-ATATT-----------TA------TG------TTTTTT-------TTTT----CTTTTTTT-------------------TTTTTTTTT-------------GTTC------------GGTCAAG---------T-----------------------------------------------------------------------AGTACAGGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................TCG------ACTAGAGCTTTCTTACT.............................................................................................................................................................................................................................20200.102200000
............................................................................................................................................................................................................................................TC---GTAGTCGAGCAG----TCTCG------ACTAGAGC......................................................................................................................................................................................................................................27200.102200000
.....................................................................................................................................................................................................................................................................................................................................TTT-------TTTT----CTTTTTTT-------------------TTTTTT..................................................................................................................................21200.051100000
.................................................................................................................................................................................................................................................................TCTCG------ACTAGAGCTTTCTTACTTG...........................................................................................................................................................................................................................24200.051000001
droGri2
TTGAAAAGTAA----------TTTTGCATGGTATTTCTTGGCTAAGCCAACCC-AATCTT-----------------------------------------------------------TGCTAA-------------------------------CTG------------------------TTGTCAGCTGG-TATTACTTATGGTATCAA-----------------AACATTTC---GCAGTCGGTTCC----GCCCG------ACTGCAACGTTCTCTCTTGTT-TAATA-----------TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:03 PM