ID:

dya_576

 Coordinate:

2R:14861490-14861640 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.7 -8.6 -8.0

Flybase annnotation

intron [Dyak\GE13911-in]; CDS [Dyak\GE13911-cds]; exon [dyak_GLEANR_14079:4]; intron [Dyak\GE13911-in]

Repeatable elements

NameClassFamilyStrand
GA-richLow_complexityLow_complexity+

Sense Strand Reads

------------######################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCGAATATCTAGTGGCGGTGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTATTGGTGCAACCGACCGGGAGACCAAAAAGAAAAACTTGCTAGTTGACGGAGGAGGAGAGGAGAGAAGTGAAGAGAACAGAAGAGGAGTCTTACAATGCAAGCATTTTCCGAGTCCACACACATATATCTCATTATCCGAGCACTGTCAAGTTCGACATCAAGTTTTCTCGAAGCAACGAAAATAAATCAAAATA
********************************************************..........((..(((...(((....(((.....)))....)))..))).))....................................********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V120
male body		 M056
embryo
 M043
female body
 M026
head
 V058
head
..............................CGATCTGACCGAGAAAGAGG......................................................................................................................................................................................................... 20 0 1 2.00 2 0 0 2 0 0
...............................GATCTGACCGAGAAAGAGGC........................................................................................................................................................................................................ 20 1 1 2.00 2 2 0 0 0 0
.................................................................................................................................................................................................................CGACATCAAGTTTTCTCGAAG..................... 21 0 1 1.00 1 0 0 1 0 0
.....................GAAGTTCTCCGATCTGACCGAGA............................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.................GTGTGAAGTTCTCCGATCTGA..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
........................GTTCTCCGATCTGACCGAGAAAGAGGGT....................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................GAAGAGAACAGAAGAGGAGT.......................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
........................................................ATTGGTGCAACCGACCGGGAGACC........................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................TATCTCATTATCCGAGCACTGTCAAGTTC......................................... 29 0 1 1.00 1 0 0 0 1 0
.........................................................................................AACTTGCTAGTTGACGGAGGA............................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
...........................CTCCGATCTGACCGAGAAAG............................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0
.............................................................................................................................GAAGAGAACAGAAGAGGA............................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
..............................CTATCTGACCGAGAAAGAGGC........................................................................................................................................................................................................ 21 2 1 1.00 1 0 1 0 0 0
...................GTGAAGTTCTCCGATCTGACCGAGAA.............................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0
..................................................GTAAGTATTGGTGCAACCG...................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0
...........................................................................................................................GTGAAGAGAACAGAAGAGGAGTCTTAC..................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
............................TCCGATCTGACCGAGAAAGAGGC........................................................................................................................................................................................................ 23 1 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................CATTATCCGAGCACTGTC............................................... 18 0 1 1.00 1 0 0 0 1 0
...........................CTCCGATCTGACCGAGAAAGAGGC........................................................................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0
..........................TCTCCGATCTGACCGAGAAAGAGGC........................................................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................AGAGAAGTGAAGAGAACAGAAGAGGAGT.......................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.........................................................................................AACTTGCTAGTTGACGGAGGAGGAGAGGA..................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
........................GTTCTCCGATCTGACCGAGAAA............................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
....................................................................................................TGACGGAGGAGGAGAGGAGA................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0
...........................CTCCGATCTGACCGAGAAAGAG.......................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..........................TCTCCGATCTGACCGAGAAAGAG.......................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.................GTGTGAAGTTCTCCGATCTGACCGA................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
...............................GATCTGACCGAGAAAGAGGCC....................................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0
...................................................................................................TTGACGGAGGAGGAGAGGAGA................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................ACACATATATCTCATTATCCGAGCA.................................................... 25 0 1 1.00 1 1 0 0 0 0
.............GGCGGTGTGAAGTTCTCCGATCTGAC.................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0
.................................................................................................................................................................................................................CGACATCAAGTTTTCTCGAAGCAACGAA.............. 28 0 1 1.00 1 1 0 0 0 0
.............GGCGGTGTGAAGTTCTCCGAT......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
.....................GAAGTTCTCCGATCTGACC................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................AGAGAAGTGAAGAGAACAGAAGA............................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................ACATCAAGTTTTCTCGAAGC.................... 20 0 1 1.00 1 0 1 0 0 0
................GGCGTGAAGTTCACCGATCTG...................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0
...............CGGTGTGAAGTTCTCCGATCTGACC................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
................................................................AACCGACCGGGAGACCAAAAAGA.................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.........................TTCTCCGATCTGACCGAGAAAGAGGCC....................................................................................................................................................................................................... 27 2 1 1.00 1 0 0 1 0 0
..........................TCTCCGATCTGACCGAGAAAGA........................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...............................GGTCTGACCGAGAAAGAGGC........................................................................................................................................................................................................ 20 2 1 1.00 1 0 1 0 0 0
...............................................................CAACCGACCGGGAGACCAA......................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.........................................................................................AACTTGATAGTCGACGGA................................................................................................................................................ 18 2 3 0.33 1 0 0 0 0 1
.............................................................................................................................GGAGAGAACAGAAGAGGA............................................................................................................ 18 1 4 0.25 1 0 1 0 0 0
..............................................................................................................................................................................................ATCCGATCACTCTCAAGTAC......................................... 20 3 6 0.17 1 0 1 0 0 0
.................................................GGGAAGTATGGGTGCAAC........................................................................................................................................................................................ 18 2 17 0.06 1 0 0 0 0 1

Anti-sense strand reads

GGCTTATAGATCACCGCCACACTTCAAGAGGCTAGACTGGCTCTTTCTCCCATTCATAACCACGTTGGCTGGCCCTCTGGTTTTTCTTTTTGAACGATCAACTGCCTCCTCCTCTCCTCTCTTCACTTCTCTTGTCTTCTCCTCAGAATGTTACGTTCGTAAAAGGCTCAGGTGTGTGTATATAGAGTAATAGGCTCGTGACAGTTCAAGCTGTAGTTCAAAAGAGCTTCGTTGCTTTTATTTAGTTTTAT
**********************************************************************************************************..........((..(((...(((....(((.....)))....)))..))).))....................................******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
........................................................................................................................................................................................................................TTCAAAAGAGCTTCGTTGCTTT............. 22 0 1 1.00 1 1
...........................................................................................................................................................................GTGTGTGTATATAGAGTA.............................................................. 18 0 1 1.00 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2R:14861440-14861690 + dya_576 CCGAATA---------TC--TAGTGGCGGTGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTATTG------------------------------GT---GC-A--ACCGA---CCGGGAGACCAAAAAGA-AA-------------AACTTGCTAGTTGACGGAG-----------------G---------------AGGAGAGGAGAGAAGTGAAGAGAACAGAAGAGGAG-----TCTTACA-ATGCAAGCA-------TTTTCCGAGTCCAC------------------AC-AC--A---------------------TA---TATCT----CATTAT------------------------------CCGAG--CACTGTCAAGTTCGACAT-------------CAA------------GTTTTCT-----CGAAGCAACGAAAATAAATCAAAATA
droEre2 scaffold_4845:8532677-8532923 - CCGAATA---------TC--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTATAG---------------------------GCGGT---GC-A--ACCGA---CCGGGAGACCAAAAGAT----------------AACTTGCTAGTTGACG-----------------------------------GAGCAGAGGAGAAAAGAGAAGATAACAGATGAGGAG-----TCTTACA-ATGCAAGCA-------TTTTCCGAGTCCAC------------------AC-A-------------------------CA---TATCG----CATTAT------------------------------CCGAG--CACTGTCAAGTTCGACAT-------------CAA------------GTTTTCT-----CGAAGCAACGAAAATAAATCAAAATA
droSec2 scaffold_1:11801630-11801871 - CCGAATA---------TC--TAGTGGCGGTGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTATAGG---------------------A---GGCGGTGGAGC-A--ACCGA---CCGGGAGACCAAAAGAT----------------AACTTGCTAGTTGACT-----------------------------------TAGCAGAGGAG---------------AGAAGAGGAG-----TCTTACA-ATGCAAGCA-------TTTTCCGAGTCCAC------------------AC-ACAGA---------------------CA---TATCG----CATTAT------------------------------CCGAG--CACTGTCAAGTTCGACAC-------------CAA------------GTTTTCT-----CGAAGCAACGAAAATAAATCAAAATA
droSim2 2r:14994752-14994993 - dsi_2885 CCGAATA---------TC--TAGTGGCGGTGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTATAGG---------------------A---GGCGGTGGAGC-A--ACCGA---CCGGGAGACCAAAAGAT----------------AACTTGCTAGTTGACT-----------------------------------TAGCAGAGGAG---------------AGAAGAGGAG-----TCTTACA-ATGCAAGCA-------TTTTCCGAGTCCAC------------------AC-ACACA---------------------CA---TATCG----CATTAT------------------------------CCGAG--CACTGTCAAGTTCGACAC-------------CAA------------GTTTTCT-----CGAAGCAACGAAAATAAATCAAAATA
dm3 chr2R:14324879-14325129 - CCGAATA---------TC--TAGTGGCGGTGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTATAGA--TA---------------GCA---GGCGGTGGTGC-A--ACCGA---CCGGGAGACCAAAGAAT----------------AACTTGCTAGTTAACT-----------------------------------TAGCAGAGGAGATAAG----------AGAAGAGGAG-----TCTTACA-ATGCAAGCA-------TTTTCCGAGTCCAC------------------AC-ACACA---------------------CA---TATCT----CATTAT------------------------------CCGAG--CACTGTCAAGTTCGATAC-------------CAA------------GTTTTCT-----CGAAGCAACGAAAATAAATCAAAATA
droEug1 scf7180000409672:3345250-3345484 - CCGAATA---------TG--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTAGAG---------------------------GCGAT---GC-C--ACCGAGAAGTGGGAGACCAAAATAT-----------------AATTGGTAGTTGACG-----------------------------------GAGCAGAGGAG-------------------GAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCCGATACCAA------------------AT-A-------------------------CA---TAACT----CATTTT------------------------------CCGAG--CACTGTCAAGTTCGACAC-------------CAACC-------GCTGATTTCT-----CGAAACAACGAAAATAAATCAAAATA
droBia1 scf7180000302292:2367326-2367565 - CCGAATA---------TC--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTAGAG---------------------------GCGGT---GC-C--ACCGA---ACGGGAGACCAGAGAAT-AC-------------CACTTGGTAGTTGACG-----------------------------------GAGCAGAGC--------------------AGAGGAGTCTAGTCTTACA-TTGCAAGCA-------TTTTCCGAGACCCG------------------AG-AC----CA------------------AATACTATCT----CATTTT------------------------------CCGAG--CACTGTCAAGTTCGACAC-------------G-----------GC-GTTTTCT-----CGAACCAACGAAAATAATTCAAAATA
droTak1 scf7180000416016:390228-390448 + CCGAATA---------TC--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTAGAG---------------------------GCGGT---GC-C--ATCGA---ACGGGAGACCAAAGA-T-----------------ACTTGGTAGTTGACG-----------------------------------GAGCAGAGG--------------------AGAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCCGAGACCAA------------------------------------------------A---TATCA----CATTTT------------------------------CCGAG--CACTGTCAAGTTCGACAC-------------G-----------GC-GGTTTCT-----CGAAACAACGAAAATAAATCAAAATA
droEle1 scf7180000489694:177845-178066 - CCGAATA---------TC--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAGAAAGAAGGTAAGTAGAG---------------------------GCGGT---GCCT--AGCGA---ACGTTAGACCATGGA-A----------------ATGTTGGTAGTTGACG-----------------------------------GAGCAGAGG--------------------AGAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCCGAGACCAC-----------------------------------------------------ATTA----CATTTT------------------------------CCGAG--CACTTTCAAGTTCGACAC-------------A-----------GCGGTTTTCT-----CGAAGCAACGAAAATAAATCAAAATA
droRho1 scf7180000779872:71919-72141 - TCGAAAA---------TC--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAAAAAGAGGGTAAGTAGAG---------------------------GCGGT---GC-T--ACCGA---ACGTTAGACCAAAGA-A----------------AAGTTGGTAGTTGACG-----------------------------------GAGCAGAGGAG------------------AGAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCCGAGACCAC-----------------------------------------------------ATTT----CATTTT------------------------------CCGAG--CACTGTCAAGATCGACAC-------------A-----------GCGGTTTTCT-----CGAAACAACGAAAATAAATCAAAATA
droFic1 scf7180000453583:60221-60436 - CCGAATA---------TC--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTAGAGA--T----------------------GGCGGT---GC-C--ACCGA---GCGGGAGACCAAAGA-A----------------AAGTTGCTAGTTGGCG-----------------------------------GAGCAGAGG--------------------AGAGGAG-----TCTAACA-TTGCAAGCA-------TTTTCCGAGTACA-------------------------------------------------A---GATCC----CATTTT------------------------------CCGAG--CACTTTCAAGTTCGACAC-------------A-----------GC-GATTTCT-----CG--------AAAATAAATCAAAATA
droKik1 scf7180000302639:33736-33966 - CCGAAC----------TC--TAGTGGCGGCGTGAAGTTCTCCGACCTGACCGAAAAAGAGGGTAAGTAGAGA---------------------A---AGAGGTGCTGC-T--ACCGT---ACGGAAGAACAGGGA---------------------------GTTGAAG---TTGGC---------TAGGAGC----------GGAGCAGAGGAG------------------TGAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCCGAGC-GAG------------------AG-GCA----------------------------------------------------------------------------CA--CACTGTCAAGTTCGGGGC-------------AGA-GGCTGTGTGC-GGTTTCT-----CGAAACAACGAAAATAAATCAAAATA
droAna3 scaffold_13266:4205482-4205770 + CCGAATA---------TCTATAGTGGCGGCGTCAAGTTCTCTGATCTGACCGAGAAAGAGGGTAAGTAGAGA--CGTTAATTATACCCAAAACCGATGGTGGT---GT-A-------------------------------------------------------GATGGAG-----------------ATGGAGGAGTAGGATGAGCTG--------------------AGTGGAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCTGAGATCTG----AGGTCTGAGATCCCGAGT----CCTACGCGA-CCTACCTATTTTA---TCTTT----CATTTC------------------------------CCGAGACCACTGTCAAGTTCGACAGAGGACCAGAGCAGA-----------GCTGTTTTCT-----CGAAGCAACGAAAATAAATCAAAATA
droBip1 scf7180000395751:21550-21792 + CCGAATA---------TC--TAGTGGCGGCGTCAAGTTCTCTGATCTGACCGAGAAAGAGGGTAAGTAGTGA--TGTTAA---------------------T----TA-T--ACCGA---ACGAGAGAT--------------------------------AGT--GAG---GAGGATGAGGATGA--GTAGC----------AGAGTGGAGGAG----------------GAGGAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCCGAGATCCC------------------GAGA----CCACCGCGA-CTT-TC-ATTGTG---TCTTT----CATTTC------------------------------CCGAGACCACTGTCAAGT---------------------------------------TCT-----CGAAACAACGAAAATAAATCAAAATA
dp5 3:11580646-11580869 - CCGCATA---------TC--TAGTGGTGGCGTCAAGTTCTCTGATCTGACCGAGAAAGAGGGTAAGTAGAGT--TGCA--------------------GCGTT---GT-A--A-CGA---A--------------------------------------------------------------------------------------------------AAAAC--GATTAGAAGAGGAG-----TTTCACACTTGCAAGCA-------TTTTCCGAAAACACTCGTGGG--------------A----CC-----GATCTT-CC-----------AGTC----CTTCCT------------------------------TCATC--CACTGTCAAGGTCGACCG-------TTTCAGA-----------GC-AGTTTCTAAGAACGAA--AACTAAAATAAATCAAAATA
droPer2 scaffold_4:6979719-6979942 - CCGCATA---------TC--TAGTGGTGGCGTCAAGTTCTCTGATCTGACCGAGAAAGAGGGTAAGTAGAGT--TGCA--------------------GCGTT---GT-A--A-CGA---A--------------------------------------------------------------------------------------------------AAGAG--GATTAGAAGAGGAG-----TTTCGCACTTGCAAGCA-------TTTTCCGAAAACACTCGTGGG--------------A----CC-----GATCTT-CC-----------AGTT----CTTCCT------------------------------TCATC--CACTGTCAAGGTCGACCG-------TTTCAGA-----------GC-AGTTTCTAAGAACGAA--AACTAAAATAAATCAAAATA
droWil2 scf2_1100000004954:3381336-3381612 + CCGTA---------------TAGTGGTGGCGTTAAGTTCTCCGATTTGACCGAAAAAGAGGGTAAGTTCTTAAATT---------------ATA---GACTA-----------------------------TAGA-TACATCTATGCATACAAATGTAGATATT--ATG---TAGGA---------TA----------------GATTATAGCAT---------------ATACATAGAT-----ACATACATTTGCAAGCAACCTTCTTTTCCCGACATCTC------------------CC-A-------------------------CA---TATTATATACATAATACTATGTATGTATACATAAGAATATAATCACAACA--CACTGTCAAGTTCGCCAG-------------A-----------GC-ATTTTCT-----CGAA--AATGAAAATAAATCAAAATA
droVir3 scaffold_12875:19949094-19949242 + TAAAATAAAAAAAAATTG--TAGCGGCGGCGTCAAGTTCTCCGATCTGACCGAGGATGAGGGTAAGTTCTGAACTG---------------CTT---AAATAG-ATGT-AGAAGAA--------------------------------------------------ACG-----------------------------------AGGCAGAGAG-----ATTGC--GAGAAGAAAAGAAA-----ATTTACTTTTGCAAGCA-------TTTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:6247429-6247477 - ----------------TC--TAGCGGAGGCGTCAAGTTCTCAGATCTAACCGAAGATGAGGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:11589019-11589181 - CAATATA---------TT--TAGCGGTGGAGTCAAGTTCTCTGATCTGACCGAGAAAGAGGGTAAGTTTTGAAATG---------------CCA---AACTAC-TTGT-AGAAGAA----------------ACGAG----------------AAAGTCAGAGAGAAGA-------GTGAGAGAGA--G-------------------AAAGGAGAAAGG-------AG-AAAGCGAGAG-----TTTACTT-TTGCAAGCA-------TTTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CCGAATA---------TC--TAGTGGCGGTGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTATTG------------------------------GT---GC-A--ACCGA---CCGGGAGACCAAAAAGA-AA-------------AACTTGCTAGTTGACGGAG-----------------G---------------AGGAGAGGAGAGAAGTGAAGAGAACAGAAGAGGAG-----TCTTACA-ATGCAAGCA-------TTTTCCGAGTCCAC------------------AC-AC--A---------------------TA---TATCT----CATTAT------------------------------CCGAG--CACTGTCAAGTTCGACAT-------------CAA------------GTTTTCT-----CGAAGCAACGAAAATAAATCAAAATASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................CGATCTGACCGAGAAAGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000
..........................................GATCTGACCGAGAAAGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200000020000
...............................................................................................................................................................................................................................................................................................................................................................................................................CGACAT-------------CAA------------GTTTTCT-----CGAAG.....................2111.00101000000000
................................GAAGTTCTCCGATCTGACCGAGA................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
............................GTGTGAAGTTCTCCGATCTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
...................................GTTCTCCGATCTGACCGAGAAAGAGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.............................................................................................................................................................................................................................GAAGAGAACAGAAGAGGAG-----T.................................................................................................................................................................................................................................2011.00100000010000
...................................................................ATTG------------------------------GT---GC-A--ACCGA---CCGGGAGACC.....................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...............................................................................................................................................................................................................................................................................................................................................TATCT----CATTAT------------------------------CCGAG--CACTGTCAAGTTC.......................................................................2911.00110000000000
.........................................................................................................................................................AACTTGCTAGTTGACGGAG-----------------G---------------A.........................................................................................................................................................................................................................................................................2111.00100100000000
......................................CTCCGATCTGACCGAGAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.............................................................................................................................................................................................................................GAAGAGAACAGAAGAGGA........................................................................................................................................................................................................................................1811.00100000010000
..............................GTGAAGTTCTCCGATCTGACCGAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.............................................................GTAAGTATTG------------------------------GT---GC-A--ACCG...................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
...........................................................................................................................................................................................................................GTGAAGAGAACAGAAGAGGAG-----TCTTAC............................................................................................................................................................................................................................2711.00100000010000
.......................................TCCGATCTGACCGAGAAAGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
........................................................................................................................................................................................................................................................................................................................................................CATTAT------------------------------CCGAG--CACTGTC.............................................................................1811.00110000000000
......................................CTCCGATCTGACCGAGAAAGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.....................................TCTCCGATCTGACCGAGAAAGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.....................................................................................................................................................................................................................AGAGAAGTGAAGAGAACAGAAGAGGAG-----T.................................................................................................................................................................................................................................2811.00100000010000
.........................................................................................................................................................AACTTGCTAGTTGACGGAG-----------------G---------------AGGAGAGGA.................................................................................................................................................................................................................................................................2911.00100000010000
...................................GTTCTCCGATCTGACCGAGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
....................................................................................................................................................................TGACGGAG-----------------G---------------AGGAGAGGAGA...............................................................................................................................................................................................................................................................2011.00101000000000
......................................CTCCGATCTGACCGAGAAAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....................................TCTCCGATCTGACCGAGAAAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
............................GTGTGAAGTTCTCCGATCTGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..........................................GATCTGACCGAGAAAGAGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...................................................................................................................................................................TTGACGGAG-----------------G---------------AGGAGAGGAGA...............................................................................................................................................................................................................................................................2111.00100000010000
.............................................................................................................................................................................................................................................................................................................AC-AC--A---------------------TA---TATCT----CATTAT------------------------------CCGAG--CA..................................................................................2511.00100000010000
........................GGCGGTGTGAAGTTCTCCGATCTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CGACAT-------------CAA------------GTTTTCT-----CGAAGCAACGAA..............2811.00100000010000
........................GGCGGTGTGAAGTTCTCCGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
................................GAAGTTCTCCGATCTGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.....................................................................................................................................................................................................................AGAGAAGTGAAGAGAACAGAAGA...........................................................................................................................................................................................................................................2311.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................ACAT-------------CAA------------GTTTTCT-----CGAAGC....................2011.00100100000000
..........................CGGTGTGAAGTTCTCCGATCTGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.............................................................................................................A--ACCGA---CCGGGAGACCAAAAAGA-.............................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....................................TTCTCCGATCTGACCGAGAAAGAGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.....................................TCTCCGATCTGACCGAGAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........................................................................................................C-A--ACCGA---CCGGGAGACCAA...................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
droEre2
CCGAATA---------TC--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTATAG---------------------------GCGGT---GC-A--ACCGA---CCGGGAGACCAAAAGAT----------------AACTTGCTAGTTGACG-----------------------------------GAGCAGAGGAGAAAAGAGAAGATAACAGATGAGGAG-----TCTTACA-ATGCAAGCA-------TTTTCCGAGTCCAC------------------AC-A-------------------------CA---TATCG----CATTAT------------------------------CCGAG--CACTGTCAAGTTCGACAT-------------CAA------------GTTTTCT-----CGAAGCAACGAAAATAAATCAAAATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................TTCTCCGATCTGACCGAGAAAGAGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...................................GTTCTCCGATCTGACCGAGAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
......................GTGGCGGCGTGAAGTTCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.....................................................................................................................................................................GACG-----------------------------------GAGCAGAGGAGAAAAGAGAA.......................................................................................................................................................................................................................................................2411.0010000100
.....................................................................................................................................................................................................................................................................................GTCCAC------------------AC-A-------------------------CA---TATCG----CATTAT------------------------------CCGAG--C...................................................................................2811.0010000010
.........................................................GAGGGTAAGTATAG---------------------------GCGGT---GC-A--ACC....................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
..................................AGTTCTCCGATCTGACCGAGA................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
.................................................................GTATAG---------------------------GCGGT---GC-A--ACCGA---CCGGGA.........................................................................................................................................................................................................................................................................................................................................................2511.0010000010
..............................................................................................................................GACCAAAAGAT----------------AACTTGCTAGT...................................................................................................................................................................................................................................................................................................................2211.0010000100
..................................AGTTCTCCGATCTGACCGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.....................AGTGGCGGCGTGAAGTTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..............................GTGAAGTTCTCCGATCTGACCGAGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000
..................................................................................................................................AAAAGAT----------------AACTTGCTAGT...................................................................................................................................................................................................................................................................................................................1811.0010000010
droSec2
CCGAATA---------TC--TAGTGGCGGTGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTATAGG---------------------A---GGCGGTGGAGC-A--ACCGA---CCGGGAGACCAAAAGAT----------------AACTTGCTAGTTGACT-----------------------------------TAGCAGAGGAG---------------AGAAGAGGAG-----TCTTACA-ATGCAAGCA-------TTTTCCGAGTCCAC------------------AC-ACAGA---------------------CA---TATCG----CATTAT------------------------------CCGAG--CACTGTCAAGTTCGACAC-------------CAA------------GTTTTCT-----CGAAGCAACGAAAATAAATCAAAATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................ATAGG---------------------A---GGCGGTGGAGC-A--ACCGA---CC.............................................................................................................................................................................................................................................................................................................................................................2511.0010001
..............................GTGAAGTTCTCCGATCTGACCGAGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
..............................GTGAAGTTCTCCGATCTGACCGAGA................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
........................GGCGGTGTGAAGTTCTCCGATCTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
................TC--TAGTGGCGGTGTGAAGTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...................................GTTCTCCGATCTGACCGAGAAAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
.....................................TCTCCGATCTGACCGAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
....................................TTCTCCGATCTGACCGAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.............................................................GTAAGTATAGG---------------------A---GGCGGTGGA.............................................................................................................................................................................................................................................................................................................................................................................2111.0011000
droSim2
CCGAATA---------TC--TAGTGGCGGTGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTATAGG---------------------A---GGCGGTGGAGC-A--ACCGA---CCGGGAGACCAAAAGAT----------------AACTTGCTAGTTGACT-----------------------------------TAGCAGAGGAG---------------AGAAGAGGAG-----TCTTACA-ATGCAAGCA-------TTTTCCGAGTCCAC------------------AC-ACACA---------------------CA---TATCG----CATTAT------------------------------CCGAG--CACTGTCAAGTTCGACAC-------------CAA------------GTTTTCT-----CGAAGCAACGAAAATAAATCAAAATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................................TATCG----CATTAT------------------------------CCGAG--CACT................................................................................2012.00200000200000000000
.......................TGGCGGTGTGAAGTTCTCCGATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
...............................................................................................................................ACCAAAAGAT----------------AACTTGCTAGT...................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................ATCG----CATTAT------------------------------CCGAG--CACT................................................................................1911.00100010000000000000
...................................GTTCTCCGATCTGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
................................GAAGTTCTCCGATCTGACCGAGAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000100000
.............................TGTGAAGTTCTCCGATCTGACCGAGA................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
...............................................................................................................................................................CTAGTTGACT-----------------------------------TAGCAGAGGAG---------------AGA..............................................................................................................................................................................................................................................2411.00100000000100000000
........................GGCGGTGTGAAGTTCTCCGATCTGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
dm3
CCGAATA---------TC--TAGTGGCGGTGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTATAGA--TA---------------GCA---GGCGGTGGTGC-A--ACCGA---CCGGGAGACCAAAGAAT----------------AACTTGCTAGTTAACT-----------------------------------TAGCAGAGGAGATAAG----------AGAAGAGGAG-----TCTTACA-ATGCAAGCA-------TTTTCCGAGTCCAC------------------AC-ACACA---------------------CA---TATCT----CATTAT------------------------------CCGAG--CACTGTCAAGTTCGATAC-------------CAA------------GTTTTCT-----CGAAGCAACGAAAATAAATCAAAATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................GATCTGACCGAGAAAGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001010000000000000000
...........................................ATCTGACCGAGAAAGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000001000000000
..........................CGGTGTGAAGTTCTCCGATCTGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CGATCTGACCGAGAAAGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.....................................TCTCCGATCTGACCGAGAAAGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGTGAAGTTCTCCGATCTGACCGAGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AGTTCTCCGATCTGACCGAGAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TTCTCCGATCTGACCGAGAAAGAGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGGCGGTGTGAAGTTCTCCGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
..........................CGGTGTGAAGTTCTCCGATCTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AATA---------TC--TAGTGGCGGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................GTTCTCCGATCTGACCGAGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GGCGGTGTGAAGTTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................T-----------------------------------TAGCAGAGGAGATAAG----------AG...............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................................................GGAG-----TCTTACA-ATGCAAGCA-------TTTT......................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GTTCTCCGATCTGACCGAGAAAGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................GCAAGCA-------TTTTCCGAGTCCAC------------------..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TTCTCCGATCTGACCGAGAAAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................GATCTGACCGAGAAAGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGTGAAGTTCTCCGATCTGACCGAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GTTAACT-----------------------------------TAGCAGAGGAGATAAG----------AGAA.............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TCTCCGATCTGACCGAGAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GAAGTTCTCCGATCTGACCGAGA................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CCGATCTGACCGAGAAAGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................G--CACTGTCAAGTTCGATAC-------------C....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGGCGGTGTGAAGTTCTCCGATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................ATGCAAGCA-------TTTTCCGAG.................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
..........................................GATCTGACCGAGAAAGAGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TCTGACCGAGAAAGAGGGTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TAGCAGAGGAGATAAG----------AGAAGAGGA........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................GGGTAAGTATAGA--TA---------------GCA---GGCGG.................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................ATAAG----------AGAAGAGGAG-----TCTTACA-ATGC......................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
droEug1
CCGAATA---------TG--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTAGAG---------------------------GCGAT---GC-C--ACCGAGAAGTGGGAGACCAAAATAT-----------------AATTGGTAGTTGACG-----------------------------------GAGCAGAGGAG-------------------GAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCCGATACCAA------------------AT-A-------------------------CA---TAACT----CATTTT------------------------------CCGAG--CACTGTCAAGTTCGACAC-------------CAACC-------GCTGATTTCT-----CGAAACAACGAAAATAAATCAAAATASizeHit CountTotal NormTotal
No Reads
droBia1
CCGAATA---------TC--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTAGAG---------------------------GCGGT---GC-C--ACCGA---ACGGGAGACCAGAGAAT-AC-------------CACTTGGTAGTTGACG-----------------------------------GAGCAGAGC--------------------AGAGGAGTCTAGTCTTACA-TTGCAAGCA-------TTTTCCGAGACCCG------------------AG-AC----CA------------------AATACTATCT----CATTTT------------------------------CCGAG--CACTGTCAAGTTCGACAC-------------G-----------GC-GTTTTCT-----CGAACCAACGAAAATAATTCAAAATASizeHit CountTotal NormTotal
No Reads
droTak1
CCGAATA---------TC--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTAGAG---------------------------GCGGT---GC-C--ATCGA---ACGGGAGACCAAAGA-T-----------------ACTTGGTAGTTGACG-----------------------------------GAGCAGAGG--------------------AGAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCCGAGACCAA------------------------------------------------A---TATCA----CATTTT------------------------------CCGAG--CACTGTCAAGTTCGACAC-------------G-----------GC-GGTTTCT-----CGAAACAACGAAAATAAATCAAAATASizeHit CountTotal NormTotal
No Reads
droEle1
CCGAATA---------TC--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAGAAAGAAGGTAAGTAGAG---------------------------GCGGT---GCCT--AGCGA---ACGTTAGACCATGGA-A----------------ATGTTGGTAGTTGACG-----------------------------------GAGCAGAGG--------------------AGAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCCGAGACCAC-----------------------------------------------------ATTA----CATTTT------------------------------CCGAG--CACTTTCAAGTTCGACAC-------------A-----------GCGGTTTTCT-----CGAAGCAACGAAAATAAATCAAAATASizeHit CountTotal NormTotal
No Reads
droRho1
TCGAAAA---------TC--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAAAAAGAGGGTAAGTAGAG---------------------------GCGGT---GC-T--ACCGA---ACGTTAGACCAAAGA-A----------------AAGTTGGTAGTTGACG-----------------------------------GAGCAGAGGAG------------------AGAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCCGAGACCAC-----------------------------------------------------ATTT----CATTTT------------------------------CCGAG--CACTGTCAAGATCGACAC-------------A-----------GCGGTTTTCT-----CGAAACAACGAAAATAAATCAAAATASizeHit CountTotal NormTotal
No Reads
droFic1
CCGAATA---------TC--TAGTGGCGGCGTGAAGTTCTCCGATCTGACCGAGAAAGAGGGTAAGTAGAGA--T----------------------GGCGGT---GC-C--ACCGA---GCGGGAGACCAAAGA-A----------------AAGTTGCTAGTTGGCG-----------------------------------GAGCAGAGG--------------------AGAGGAG-----TCTAACA-TTGCAAGCA-------TTTTCCGAGTACA-------------------------------------------------A---GATCC----CATTTT------------------------------CCGAG--CACTTTCAAGTTCGACAC-------------A-----------GC-GATTTCT-----CG--------AAAATAAATCAAAATASizeHit CountTotal NormTotal
No Reads
droKik1
CCGAAC----------TC--TAGTGGCGGCGTGAAGTTCTCCGACCTGACCGAAAAAGAGGGTAAGTAGAGA---------------------A---AGAGGTGCTGC-T--ACCGT---ACGGAAGAACAGGGA---------------------------GTTGAAG---TTGGC---------TAGGAGC----------GGAGCAGAGGAG------------------TGAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCCGAGC-GAG------------------AG-GCA----------------------------------------------------------------------------CA--CACTGTCAAGTTCGGGGC-------------AGA-GGCTGTGTGC-GGTTTCT-----CGAAACAACGAAAATAAATCAAAATASizeHit CountTotal NormTotal
No Reads
droAna3
CCGAATA---------TCTATAGTGGCGGCGTCAAGTTCTCTGATCTGACCGAGAAAGAGGGTAAGTAGAGA--CGTTAATTATACCCAAAACCGATGGTGGT---GT-A-------------------------------------------------------GATGGAG-----------------ATGGAGGAGTAGGATGAGCTG--------------------AGTGGAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCTGAGATCTG----AGGTCTGAGATCCCGAGT----CCTACGCGA-CCTACCTATTTTA---TCTTT----CATTTC------------------------------CCGAGACCACTGTCAAGTTCGACAGAGGACCAGAGCAGA-----------GCTGTTTTCT-----CGAAGCAACGAAAATAAATCAAAATASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................CTGATCTGACCGAGAAAGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.....................AGTGGCGGCGTCAAGTTCTCTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
......................GTGGCGGCGTCAAGTTCTCTGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
................................................................................................TGGTGGT---GT-A-------------------------------------------------------GATGGAG-----------------ATGGAGGA..................................................................................................................................................................................................................................................................................2511.001000010
...........................GGCGTCAAGTTCTCTGATCTGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......................................................................................................T---GT-A-------------------------------------------------------GATGGAG-----------------ATGGAGGA..................................................................................................................................................................................................................................................................................1911.001100000
..........................................................................................................................................................................................................................................................................................................................................TA---TCTTT----CATTTC------------------------------CCGAGACC...................................................................................2111.001000001
......................GTGGCGGCGTCAAGTTCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........................GGCGGCGTCAAGTTCTCTGATCTGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..............................GTCAAGTTCTCTGATCTGACCGAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000
...................................................................................................................................................................................................................................................................GCA-------TTTTCTGAGATCTG----AGG.....................................................................................................................................................................................2011.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................GACAGAGGACCAGAGCAGA-----------GCT......................................2211.001000001
droBip1
CCGAATA---------TC--TAGTGGCGGCGTCAAGTTCTCTGATCTGACCGAGAAAGAGGGTAAGTAGTGA--TGTTAA---------------------T----TA-T--ACCGA---ACGAGAGAT--------------------------------AGT--GAG---GAGGATGAGGATGA--GTAGC----------AGAGTGGAGGAG----------------GAGGAGGAG-----TCTTACA-TTGCAAGCA-------TTTTCCGAGATCCC------------------GAGA----CCACCGCGA-CTT-TC-ATTGTG---TCTTT----CATTTC------------------------------CCGAGACCACTGTCAAGT---------------------------------------TCT-----CGAAACAACGAAAATAAATCAAAATASizeHit CountTotal NormTotal
No Reads
dp5
CCGCATA---------TC--TAGTGGTGGCGTCAAGTTCTCTGATCTGACCGAGAAAGAGGGTAAGTAGAGT--TGCA--------------------GCGTT---GT-A--A-CGA---A--------------------------------------------------------------------------------------------------AAAAC--GATTAGAAGAGGAG-----TTTCACACTTGCAAGCA-------TTTTCCGAAAACACTCGTGGG--------------A----CC-----GATCTT-CC-----------AGTC----CTTCCT------------------------------TCATC--CACTGTCAAGGTCGACCG-------TTTCAGA-----------GC-AGTTTCTAAGAACGAA--AACTAAAATAAATCAAAATASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................CTCTGATCTGACCGAGAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
.....................AGTGGTGGCGTCAAGTTCTCTGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000002000
..........................................GATCTGACCGAGAAAGAGGGTAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
............................................................................................................................................................................................................................................................................................................................................................CT------------------------------TCATC--CACTGTCAAGGTC.......................................................................2011.0010100000000
......................................CTCTGATCTGACCGAGAAAGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
..........................................GATCTGACCGAGAAAGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
........................GGTGGCGTCAAGTTCTCTGATCT........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
........................GGTGGCGTCAAGTTCTCTGATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.........................................TGATCTGACCGAGAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
......................................CTCTGATCTGACCGAGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................................GTTCTCTGATCTGACCGAGAAAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...........................................ATCTGACCGAGAAAGAGGCG........................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000001
droPer2
CCGCATA---------TC--TAGTGGTGGCGTCAAGTTCTCTGATCTGACCGAGAAAGAGGGTAAGTAGAGT--TGCA--------------------GCGTT---GT-A--A-CGA---A--------------------------------------------------------------------------------------------------AAGAG--GATTAGAAGAGGAG-----TTTCGCACTTGCAAGCA-------TTTTCCGAAAACACTCGTGGG--------------A----CC-----GATCTT-CC-----------AGTT----CTTCCT------------------------------TCATC--CACTGTCAAGGTCGACCG-------TTTCAGA-----------GC-AGTTTCTAAGAACGAA--AACTAAAATAAATCAAAATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................GTCAAGTTCTCTGATCTGACCGAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
........................GGTGGCGTCAAGTTCTCTGATCTGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
........................................CTGATCTGACCGAGAAAGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
...................................................................................................................................................................................................................................................................................GAAAACACTCGTGGG--------------A----CC-----GATCTT-C...................................................................................................................................................2511.001100000
...................................GTTCTCTGATCTGACCGAGA................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........................GTGGCGTCAAGTTCTCTGATCT........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......................................CTCTGATCTGACCGAGAAAGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
....................................TTCTCTGATCTGACCGAGAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
........................GGTGGCGTCAAGTTCTCTGATCC........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..............................GTCAAGTTCTCTGATCTGACCGAGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................................CAAGTTCTCTGATCTGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................CGACCG-------TTTCAGA-----------GC-AGTTT.................................2011.001000001
.......................................TCTGATCTGACCGAGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................................................................................................................................................................................................................................................AAACACTCGTGGG--------------A----CC-----GATCTT-CC-----------A......................................................................................................................................2511.001100000
...................................................................................................................................................................................................................................................................................GAAAACACTCGTGGG--------------A----CC-----...........................................................................................................................................................1811.001100000
...........................GGCGTCAAGTTCTCTGATCT........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........................GGTGGCGTCAAGTTCTCTGATCT........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.....................................................GAAAGAGGGTAAGTAGAGT--TGCA--------------------GC...................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................................GTCGACCG-------TTTCAGA-----------GC-AGT...................................2011.001100000
................................CAAGTTCTCTGATCTGACCGAGA................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................CGTCAAGTTCTCTGATCTGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
droWil2
CCGTA---------------TAGTGGTGGCGTTAAGTTCTCCGATTTGACCGAAAAAGAGGGTAAGTTCTTAAATT---------------ATA---GACTA-----------------------------TAGA-TACATCTATGCATACAAATGTAGATATT--ATG---TAGGA---------TA----------------GATTATAGCAT---------------ATACATAGAT-----ACATACATTTGCAAGCAACCTTCTTTTCCCGACATCTC------------------CC-A-------------------------CA---TATTATATACATAATACTATGTATGTATACATAAGAATATAATCACAACA--CACTGTCAAGTTCGCCAG-------------A-----------GC-ATTTTCT-----CGAA--AATGAAAATAAATCAAAATASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................TG---TAGGA---------TA----------------GATTATAGCAT---------------ATACATA..........................................................................................................................................................................................................................................2711.00100010
........................GGTGGCGTTAAGTTCTCCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...........................................................................................................................................................GTAGATATT--ATG---TAGGA---------TA----------------GATTATA....................................................................................................................................................................................................................................................................2611.00110000
...................................................................................................................................................ATACAAATGTAGATATT--ATG---T..........................................................................................................................................................................................................................................................................................................2111.00101000
........................................................................................................................................................................G---TAGGA---------TA----------------GATTATAGCAT---------------.................................................................................................................................................................................................................................................1911.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................TGTCAAGTTCGCCAG-------------A-----------GC-......................................1811.00100010
.............................................................................................................................................................................................................................................GAT-----ACATACATTTGCAAGCAAC...............................................................................................................................................................................................................2211.00100010
...................................GTTCTCCGATTTGACCGAAAAAGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.....................AGTGGTGGCGTTAAGTTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
droVir3
TAAAATAAAAAAAAATTG--TAGCGGCGGCGTCAAGTTCTCCGATCTGACCGAGGATGAGGGTAAGTTCTGAACTG---------------CTT---AAATAG-ATGT-AGAAGAA--------------------------------------------------ACG-----------------------------------AGGCAGAGAG-----ATTGC--GAGAAGAAAAGAAA-----ATTTACTTTTGCAAGCA-------TTTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................G-----ATTGC--GAGAAGAAAAGA.........................................................................................................................................................................................................................................1812.002001000000000000000000100000000000000000000000000000000000000000
..........................................GATCTGACCGAGGATGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000000000000000000000000000100000000000000000000000010
...........................................ATCTGACCGAGGATGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................1812.002010000000010000000000000000000000000000000000000000000000000000
....................................TTCTCCGATCTGACCGAGGATGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................G-----------------------------------AGGCAGAGAG-----ATTGC--GAGA.................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
..................................................................TTCTGAACTG---------------CTT---AAATAG-AT.............................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................GAG-----ATTGC--GAGAAGAAAAGA.........................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
..AAATAAAAAAAAATTG--TAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................CTCCGATCTGACCGAGGATGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................GTTCTCCGATCTGACCGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ATTTACTTTTGCAAGCA-------TTTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2311.001000100000000000000000000000000000000000000000000000000000000000
..............................................TGACCGAGGATGAGGGTAAGTTCTG................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
......................................CTCCGATCTGACCGAGGATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.....................................TCTCCGATCTGACCGAGGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
..........................................GATCTGACCGAGGATGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
...............................TCAAGTTCTCCGATCTGACCGAGGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
.....................................TCTCCGATCTGACCGAGGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000010000000000000000000000000000000000000000000000
droMoj3
----------------TC--TAGCGGAGGCGTCAAGTTCTCAGATCTAACCGAAGATGAGGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................CTCAGATCTAACCGAAGATGA............................................................................................................................................................................................................................................................................................................................................................................................................................2112.002100001
...........................GGCGTCAAGTTCTCAGATCTAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.............................CGTCAAGTTCTCAGATCTAACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100
.....................................TCTCAGATCTAACCGAAGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........................AGGCGTCAAGTTCTCAGATCTAACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droGri2
CAATATA---------TT--TAGCGGTGGAGTCAAGTTCTCTGATCTGACCGAGAAAGAGGGTAAGTTTTGAAATG---------------CCA---AACTAC-TTGT-AGAAGAA----------------ACGAG----------------AAAGTCAGAGAGAAGA-------GTGAGAGAGA--G-------------------AAAGGAGAAAGG-------AG-AAAGCGAGAG-----TTTACTT-TTGCAAGCA-------TTTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................GCGGTGGAGTCAAGTTCTCTGATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110

Generated: 05/17/2015 at 10:49 PM