ID:

dya_575

 Coordinate:

2R:14860821-14861074 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.1 -32.6 -32.5

Flybase annnotation

intron [Dyak\GE13911-in]; CDS [Dyak\GE13911-cds]; exon [dyak_GLEANR_14079:3]; exon [dyak_GLEANR_14079:2]; CDS [Dyak\GE13911-cds]; intron [Dyak\GE13911-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------######################################------------
CGACGGGACAGTCCCGCTTGTGTACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTGATTCTATTTTGGGGAGAATGTGAAATGGGAACTGGGGAATGGGTAATGGGTAATGGGAATGCCGGTCCTAGACTAAGGCAAGTTAGCGATTGCTTTGGGCCTCGGGCAGCTCTGTAAGTAGAGGAGGAGGATAAGAAGCCATGGCGATAGCGGGATTACCTTTAGATAAATCCCCTCATTACAATTCTATTGTCCCGAAAACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTCCCTC
*****************************************************************************************.((((...(((((..((.((((..............)))).))))))).(((((((((........))))))))).((((......(((((....)))))...))))........)))).((....))....************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V120
male body		 GSM1528802
follicle cells		 M056
embryo
 M043
female body
 M026
head
 SRR1275484
Male prepupae		 V058
head
................................GAGAACCTTGGATGGAAGGT.............................................................................................................................................................................................................................................................................................................. 20 0 1 10.00 10 10 0 0 0 0 0 0
............................CTTCGAGAACCTTGGATGGAAGGT.............................................................................................................................................................................................................................................................................................................. 24 0 1 8.00 8 7 0 1 0 0 0 0
......GACAGTCCCGCTTGTGTACCTTCTTCGA................................................................................................................................................................................................................................................................................................................................ 28 0 1 6.00 6 0 6 0 0 0 0 0
....................................................................................................................................................TAAGAGATTGCTTTGGGCC........................................................................................................................................................................................... 19 2 2 3.50 7 0 0 0 7 0 0 0
............................CTTCGAGAACCTTGGATGGAAGGC.............................................................................................................................................................................................................................................................................................................. 24 1 1 2.00 2 0 0 2 0 0 0 0
...................................................................................................................................................GTAAGAGATTGCTTTGGGCC........................................................................................................................................................................................... 20 2 1 2.00 2 0 0 0 2 0 0 0
.........................................................................................AATGGGAACTGGGGAATGGGTAATGGGT............................................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................TAAGAAGCCATGGCGATAGCGGGA..................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................................................GGGCAGCTCTGTAAGTAGGGGAGGAGG.............................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0
......GACAGTCCCGCTTGTGTACCTT...................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................................................................................................................TAAGAAGCCATGCCGATAGCGGGAT.................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................GGGTAATGGGTAATGGGAAT.................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0
................................................................................................................................................................................................................................................................................................................GTATTCCGCTTGCCTGAAACGGC........................... 23 1 1 1.00 1 0 0 1 0 0 0 0
.........................................................................................................................................................................................................AAGCCATGGCGATAGCGGGA..................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................CCTGAAACGGCCACTGTTTTACTCAG............ 26 0 1 1.00 1 0 0 1 0 0 0 0
............................CTTCGAGAACCTTGGATGG................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................ATAAGAAGCCATGGCGATAGCGGGA..................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
...............................CGAGAACCTTGGATGGAAGGT.............................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
......GAAAGTCCCGCTTGTGTCACTTCTTCGA................................................................................................................................................................................................................................................................................................................................ 28 3 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................................................AAGTTAGCGATTGCTTTGGGCCT.......................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................AGAAGCCATGGCGATAGCGGGATT................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
......GACAGTCCCGCTTGTGTCCCTTCTTCGA................................................................................................................................................................................................................................................................................................................................ 28 1 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACGGCCACT....................... 27 0 1 1.00 1 0 0 1 0 0 0 0
......GACAGTCCCGCTTGTGTACCTTTTTCGA................................................................................................................................................................................................................................................................................................................................ 28 1 1 1.00 1 0 1 0 0 0 0 0
...............................CGAGAACCTTGGATGGAAG................................................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................GTAATGGGAATGCCGGTCCTAGACTAAGG.................................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0
......GAAAGTCCCGCTTGTGTACCTTCTTCGA................................................................................................................................................................................................................................................................................................................................ 28 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................................................................................................................ATAAGAAGCCATGGCGATAGCGGGAT.................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................GGTAATGGGTAATGGGAATGCC................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0
......GACCGTCCCGCTTGTGTCCCTTCTTCGA................................................................................................................................................................................................................................................................................................................................ 28 2 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGC........................... 21 0 1 1.00 1 0 0 1 0 0 0 0
.....................................................AGTGACGTGGCTGATGCTATT........................................................................................................................................................................................................................................................................................ 21 3 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................GAACTGGGGAATGGGTAATGGGTAATGG........................................................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................AAGTTAGCGATTGCTTTGGGCCTC......................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0
.....GTACAGTCCCGCTTGTGTAC......................................................................................................................................................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................CGGCCACTGTTTTACTCAGT........... 20 1 1 1.00 1 0 0 1 0 0 0 0
............................CTTCGAGAACCTTGGATGGAAG................................................................................................................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0
...........................TCTTCGAGAACCTTGGATGGAAGGTGAGT.......................................................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................GTGAAATGGGAACTGGGGAATGG...................................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................AATGGGAATGCCGGTCCTAGACTAAGGC................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................GGTATTCCGCGTGCCTGAAACGGCCA......................... 26 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................ATGGCGATAGCGGGATTACCT............................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................GAAACGGCCACTGTTTTACTCAGT........... 24 1 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................................................................................................................ATAAGAAGCCATGGCGATAGCGGG...................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
................................GAGAACCTTGGATGGAAGG............................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................GATAAGAAGCCATGGCGATAGCG........................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCC.......................... 22 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................AAGAAGCCATGGCGATAGCGGGA..................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
..............................TCGAGAACCTTGGATGGAAGGT.............................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................GGTAAGAAGCCATGGCGT............................................................................................................................................. 18 2 4 0.50 2 0 0 0 2 0 0 0
......................................................................................................................................................AGAGATTGCTTTGGGCCT.......................................................................................................................................................................................... 18 1 2 0.50 1 0 0 0 1 0 0 0
......GACAGTCCCGTATGTGTAGC........................................................................................................................................................................................................................................................................................................................................ 20 3 2 0.50 1 0 0 0 0 1 0 0
...................................................................................................................................................GTAAGAGATTGCTTTGGGC............................................................................................................................................................................................ 19 2 5 0.20 1 0 0 0 1 0 0 0
..................................................................................................................................................TGTAAGAGATTGCTTTGGGCC........................................................................................................................................................................................... 21 3 5 0.20 1 0 0 0 1 0 0 0
...................................................................................................................................................GTAAGTGATTGCTTTGGGC............................................................................................................................................................................................ 19 2 6 0.17 1 0 0 0 1 0 0 0
.....................................................................................................................................................AAGAGATTGCTTTGGGCC........................................................................................................................................................................................... 18 2 14 0.14 2 0 0 0 2 0 0 0
......GACAGTCCCGTATGTGT........................................................................................................................................................................................................................................................................................................................................... 17 2 7 0.14 1 0 0 0 0 0 1 0
...................................................................................................................................................GTAAGTGATTGCTTTGGGCTT.......................................................................................................................................................................................... 21 3 14 0.07 1 0 0 0 1 0 0 0
.....................................................AGTGTAGTGGGTGATCATA.......................................................................................................................................................................................................................................................................................... 19 3 18 0.06 1 0 0 0 1 0 0 0
.......................................................................................................AATGGGTCACGGGTAAT.......................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 1
....................................................................................................................................................TAAGTGATTGCTTTGGGCTT.......................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 1 0 0 0

Anti-sense strand reads

GCTGCCCTGTCAGGGCGAACACATGGAAGAAGCTCTTGGAACCTACCTTCCACTCACAGCACCCACTAAGATAAAACCCCTCTTACACTTTACCCTTGACCCCTTACCCATTACCCATTACCCTTACGGCCAGGATCTGATTCCGTTCAATCGCTAACGAAACCCGGAGCCCGTCGAGACATTCATCTCCTCCTCCTATTCTTCGGTACCGCTATCGCCCTAATGGAAATCTATTTAGGGGAGTAATGTTAAGATAACAGGGCTTTTGAGCTTTGTTTCGTTACTCGTACAATTTATAAAAGTCCATAAGGCGCACGGACTTTGCCGGTGACAAAATGAGTCCATTTAAGGGAG
*************************************************************************************************************************************.((((...(((((..((.((((..............)))).))))))).(((((((((........))))))))).((((......(((((....)))))...))))........)))).((....))....***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 V058
head
...............................................................................................................................GGCCAGGATCTGATTCCGT................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0
...............CGAACACATGGAAGAAGCTCTT............................................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0
......................................................................................................................................................................GTGCCAGTCAAGACATTCAT........................................................................................................................................................................ 20 3 6 0.17 1 0 0 1
....................................................................................................................................................ATTCACTAACGAAACCCGAA.......................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2R:14860771-14861124 + dya_575 CGACGGGACAGTCCCGCTTGTGTACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT-------TTGGGGA-----------------G---AATGTGAAATGGGAACTGGGGAATGGG-----TAATGG---GT--AATGGGA--AT--------------------------------------GCC--GGTCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCT-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAGGATAAGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--A--AA-------------------TCCC----CTCAT-TACAATTCTATTGTCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CCCTC
droEre2 scaffold_4845:8533211-8533562 - CGACGGGACAGTCCCGCCTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT---------GGGTG---------------------AATGGGA-ATGGGAAC-GGGGAATGGGAATGGGAATGG---GAATGATGGGA--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GGTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGATG---AGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--A----------------------CTCCC----CTCAT-TACAATTCTATTGTCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CCCTC
droSec2 scaffold_1:11802170-11802491 - CGACGGGACAGTCCCGCTTGTGCACTTTCTTCGAAAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--ACGAT-------------------TCCC----CTCAT-TACAATTCTATTGTGC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CCCTC
droSim2 2r:14995292-14995613 - dsi_3030 CGACGGGACAGTCCCGCTTGTGCACTTTCTTCGAAAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--ACGAT-------------------TCCC----CTCAT-TACAATTCTATTGTGC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CCCTC
dm3 chr2R:14325433-14325762 - CGACGGGACAGTCCCGCTTGTGCACTTTCTTCGAAAACCTTGGATGGAAGGTGAGTGTCGTGGGTGGATTC--------------TATT---------GGGGG------------------------------------------AATGGG-----AAATGG---GA--AATGGGT--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCCGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--ACGAT-------------------TCCC----CTCAT-TACAATTCTATTGTGC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CCCTC
droEug1 scf7180000409672:3345801-3346154 - CGACAGGCCAGTCCCGTTTGTGCACCTTCTTTGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTGTATTGTATGTGTGTTTGTTT--T--------TGGGGGAAAAGGGAAGAAAAAGTTATT---GGG---------------------------------------AATGGGA--AT--------------------------------------GCC--GATCCTAGACTACGGCAA-GTTAGCTATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAAA----TGATTGAGCCATGGCGATAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CTCAT-TACAATTCTATTGTCC-C-GAAAAA-------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CTCTC
droBia1 scf7180000302292:2367850-2368177 - CGACGGGACAGTCCCGGTTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTC--------------TC----------TGGGG-------------------------------------------GATGAT-----AAATGGCGGGA-CGATGGGA--AT--------------------------------------GCC--GATCCTAGACTTAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAACG---AAG---AGCCATGGCGGTAGCGGGATTACCTTTA--GAT--A----------------------CTCCC----CTCAT-TACAATTCTATTGTCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CTCTC
droTak1 scf7180000416016:389594-389921 + CGACGGGACAGTCCCGGTTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTTCAT-TTTGTTCG--T--T-------TTGGGG---------------------------------------------AGG-------------------GATGGGA--CT--------------------------------------GCCTAGATCCTAGACTTAGGCGA-ATTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AAG---------------------------------------------------------AGAATGAAGAG----AGCCATGGCGGTAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CTCAT-TACAATTCTATTGTCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CTCTC
droEle1 scf7180000489694:178366-178682 - CGACTGGCCAGTCCCGCCTGTGCACCTTTTTTGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTT-----------GTCG--T--------TGAGG-------------------------------------------GATGG-------------------GATGGGA--AT--------------------------------------GTC--GATCCTAGACTAAGGCAA-GATAGCGATTGCTTTGGGCCG-CGGGCTGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAATG---TGA---GGCCGTGGCTGCAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CACTT-TACAATTCTATTGCCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CTCTC
droRho1 scf7180000779872:72425-72730 - CGACGGGCCAGTCCCGATTGTGCACCTTCTTTGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTT--------------------------TGGG--------------------------------------------------------------------GATGGGA--AT--------------------------------------GTC--GATCCTAGACTAAGGCAA-GATAGCGATTGCTTTGGGCAG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAAAG---TGA---AGCCATGGCTGCAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CACTT-TACATTTCTATTGCCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CTTTC
droFic1 scf7180000453583:60734-61050 - CGACGGGACAGTCCCGATTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGG--AATC--------------TGTTTGGCTTTATG-GGGAT------------------T---GG-------------------G-----------------G--GATGGGA--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGAT--------ACCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAAAG---TGG---AGCCACGGCAGTAGCGGGATTACCTTTA--GAT--T----------------------C-CCC----CTCAT-TACCATTCTATTGCCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CTCTC
droKik1 scf7180000302639:34271-34592 - CGACGGGCCAGTCCCGATTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGG--AAGCA--------------AT------------GG-------------------------------------------GATGG-------------------GATGGGACCATGGGGGCATTTTGGGGGGATCCTGG--------------GGC--GATCCTAG-------------------------------------------TGTAAGTGGTGCCCAAGCAG--AGGCGGGCGA--CGGCG------------------------AA---------------AGAGGATGATGAGG---A---------GTAGCG---TCACCTTTA--GAGATA----------------------C-TCCCTCCTCTCTTAAAATTTCTATTGCCCCCTGAA----------AAC-C----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATG---CTCTC
droAna3 scaffold_13266:4204841-4205178 + dan_1770 CGACCGGCCAGTCCCGTCTGTGCACCTTTTTCGAGAACCTTGGATGGAAGGTGAGTGTCGCGGGTG-TTGCAAG-TTT----GTTT--T-------TTGGGGT-----------------T---AATGAT---------------------------------------AATAGG----------------------------------------------------ATAGACTAAGGCTA-----------------------AGGGCAGCTTCGTAAGTAGTGCCC----CCAA---TGGG-----------------------------------ATAGGGAATGGGAATGGGAATGGGAGGT---------------GATGCGGGTTCATTTTTTTGGTT--ACAACTCCTGATACAGAATGATAC---T----CTTGT-TAAATTCTTATTGCCCCC-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATG---CTCTC
droBip1 scf7180000395751:20946-21245 + CGACTGGCCAGTCCCGCCTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGGGGGTG-TTGCA--------------A-------------------------------------------------------------------------------------GGGG--AT--------------------------------------GCTAGG---ATAGACTAAGGCTAAG---GCGATTGCTTCGGGATGGGGGGCAGCTCCGTAAGTAGTGCCC----CTGA---TGGGTGA--CGGCGG------------------------A---------------GGAGTGGGAGCA---------------GAAGCGGGTTCACTTTTT--CTT--A----------------------C------------------TTCTTATTGCCC-C-CGA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATG---CTCTC
dp5 3:11581234-11581587 - CAACGGGCCAGTCCCGTCTGTGCACGTTCTTTGAGAACCTGGGATGGAAGGTAAGTGTTGTGGGGC-ATTC--------------CATT---------CGGGT-----------------------------------------------------------------------------------ATTC-GGGGGTACCATTAGGTAGAAAAGGCCTGCGAGG--------CTT------G---AGC-TTTGTTTTGGGCCA-CGGGCAGC--TGTAAGTAGTGCCCAATCCTGG---TGGGCCAATCAGCGGGCAGAAGGCAGTAACAGACTAAGAA---------------AGAACCCGCTT----------------------AGAATATCT--C--AAT--ATCTC-------------------TTTC----TTTCG-TACCTTCCTATTGCCC-C-GCA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTGTTCCGCGTGCCTGAAACGGCCACTGTGTTACTCAGGTAAATG---CTCTC
droPer2 scaffold_4:6980302-6980655 - CAACGGGCCAGTCCCGTCTGTGCACGTTCTTTGAGAACCTGGGATGGAAGGTAAGTGTTGTGGGGC-ATTC--------------CATT---------CGGGT-----------------------------------------------------------------------------------ATTC-GGGGGTACCATTAGGTAGAAAAGGCCTGCGAGG--------CTT------G---AGC-TTTGTTTTGGGCCA-CGGGCAGC--TGTAAGTAGTGCCCAATCCTGG---TGGGCCAATCAGCGGGCAGAAGGCAGTAACAGACTAAGAA---------------AGAACCCGCTT----------------------AGAATATCT--C--AAT--ATCTC-------------------TTTC----TTTCG-TACCTTCCTATTGCCC-C-GCA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTGTTCCGCGTGCCTGAAACGGCCACTGTGTTACTCAGGTAAATG---CTCTC
droWil2 scf2_1100000004954:3380831-3380930 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT-C-GAA----------AATTCGAACGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTTTTCCGCGTGCCTGAAACGGCCACTGTATTACTCAGGTAAATG---CCTAA
droVir3 scaffold_12875:19948422-19948541 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-CACAACAAAATTATCC-C-AAAAACAAATCGCAACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTACTACTCAGGTAAATG---CCTT-
droMoj3 scaffold_6496:6247986-6248073 - C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCGACAGTTCTACTCAGGTAAATGCATCAATC
droGri2 scaffold_15245:11589763-11589852 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------ATCTC----GAAACAAAGCAATGAGCATGTTCAATATTTTCAGGTGTTCCGCGTGCCTGAAACGGCCACTGTACTACTCAGGTAAATG---CCTTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CGACGGGACAGTCCCGCTTGTGTACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT-------TTGGGGA-----------------G---AATGTGAAATGGGAACTGGGGAATGGG-----TAATGG---GT--AATGGGA--AT--------------------------------------GCC--GGTCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCT-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAGGATAAGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--A--AA-------------------TCCC----CTCAT-TACAATTCTATTGTCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CCCTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................GAGAACCTTGGATGGAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.0010000000100000
............................CTTCGAGAACCTTGGATGGAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2418.00800100070000
......GACAGTCCCGCTTGTGTACCTTCTTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2816.00600000000006
............................CTTCGAGAACCTTGGATGGAAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000
...................................................................................................................................AATGGGAACTGGGGAATGGG-----TAATGG---GT--...................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................TAAGA---AGCCATGGCGATAGCGGGA......................................................................................................................................................................................2411.00100000010000
......GACAGTCCCGCTTGTGTACCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
....................................................................................................................................................GGG-----TAATGG---GT--AATGGGA--AT--------------------------------------..................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................A---AGCCATGGCGATAGCGGGA......................................................................................................................................................................................2011.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAAACGGCCACTGTTTTACTCAG...............2611.00100100000000
............................CTTCGAGAACCTTGGATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAGA---AGCCATGGCGATAGCGGGA......................................................................................................................................................................................2511.00100000010000
...............................CGAGAACCTTGGATGGAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...............................................................................................................................................................................................................................................AA-GTTAGCGATTGCTTTGGGCCT-....................................................................................................................................................................................................................................................................................................................2311.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................AGA---AGCCATGGCGATAGCGGGATT....................................................................................................................................................................................2411.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACGGCCACT..........................2711.00100100000000
...............................CGAGAACCTTGGATGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.....................................................................................................................................................................GT--AATGGGA--AT--------------------------------------GCC--GGTCCTAGACTAAGG..............................................................................................................................................................................................................................................................................................................................................2911.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAGA---AGCCATGGCGATAGCGGGAT.....................................................................................................................................................................................2611.00100000010000
.....................................................................................................................................................GG-----TAATGG---GT--AATGGGA--AT--------------------------------------GCC--.............................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGC..............................2111.00100100000000
........................................................................................................................................GAACTGGGGAATGGG-----TAATGG---GT--AATGG..............................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...............................................................................................................................................................................................................................................AA-GTTAGCGATTGCTTTGGGCCT-C...................................................................................................................................................................................................................................................................................................................2411.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCACTGTTTTACTCAGT..............2011.00100100000000
............................CTTCGAGAACCTTGGATGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........................TCTTCGAGAACCTTGGATGGAAGGTGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
...............................................................................................................................GTGAAATGGGAACTGGGGAATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.........................................................................................................................................................................AATGGGA--AT--------------------------------------GCC--GGTCCTAGACTAAGGC.............................................................................................................................................................................................................................................................................................................................................2811.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTCCGCGTGCCTGAAACGGCCA............................2611.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................ATGGCGATAGCGGGATTACCT................................................................................................................................................................................2111.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGGCCACTGTTTTACTCAGT..............2411.00110000000000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAGA---AGCCATGGCGATAGCGGG.......................................................................................................................................................................................2411.00100000010000
................................GAGAACCTTGGATGGAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................GATAAGA---AGCCATGGCGATAGCG.........................................................................................................................................................................................2311.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCC.............................2211.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................AAGA---AGCCATGGCGATAGCGGGA......................................................................................................................................................................................2311.00100000010000
..............................TCGAGAACCTTGGATGGAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEre2
CGACGGGACAGTCCCGCCTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT---------GGGTG---------------------AATGGGA-ATGGGAAC-GGGGAATGGGAATGGGAATGG---GAATGATGGGA--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GGTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGATG---AGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--A----------------------CTCCC----CTCAT-TACAATTCTATTGTCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CCCTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................CTTCGAGAACCTTGGATGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
..............................TCGAGAACCTTGGATGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
............................CTTCGAGAACCTTGGATGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
........................................................................................................................................................................................................................................................................................................AGG---------------------------------------------------------AGGATG---AGA---AGCCATGGC................................................................................................................................................................................................2111.0010001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCCGCGTGCCTGAAACGGCCACTG.........................2711.0011000000
....GGGACAGTCCCGCCTGTGCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.......................................................................................TT---------GGGTG---------------------AATGGGA-ATGGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
......GACAGTCCCGCCTGTGCACCTTCTTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTATTCCGCGTGCCTGAAACGGCCA............................2711.0011000000
.....................................................................................................................................................................................................................................................................................AAGTAG-------------AGG---------------------------------------------------------AGGATG---AGA---.........................................................................................................................................................................................................1811.0010000100
...........................TCTTCGAGAACCTTGGATGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGAAACGGCCACTGTTTTAC...................2411.0011000000
............................CTTCGAGAACCTTGGATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATGAGCATGTTAAATATTT.........................................................2311.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACG................................2111.0010000010
..........................................................................................................................................AC-GGGGAATGGGAATGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................18120.0810000100
droSec2
CGACGGGACAGTCCCGCTTGTGCACTTTCTTCGAAAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--ACGAT-------------------TCCC----CTCAT-TACAATTCTATTGTGC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CCCTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................TGCACTTTCTTCGAAAACCTTGGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACGGCCACTGT........................2911.0010010
..................................................................................................GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--A.........................................................................................................................................................................................................................................................................................................................................................................................................2021.0020101
.......................................................................................TT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--A.........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..................................AAACCTTGGATGGAAGGTGAGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
.......................................................................................TT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGG.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.........................TTTCTTCGAAAACCTTGGATGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACGGCCACT..........................2711.0010010
........................................................................................T---------GGGGGAA------------------T---GGG------------------------------------A--AATGGG.............................................................................................................................................................................................................................................................................................................................................................................................................1920.5011000
........................................................................................T---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--..........................................................................................................................................................................................................................................................................................................................................................................................................2020.5011000
...................................................................................................GGGGAA------------------T---GGG------------------------------------A--AATGGGT--..........................................................................................................................................................................................................................................................................................................................................................................................................1830.3310100
........................................................................................T---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGA--..........................................................................................................................................................................................................................................................................................................................................................................................................2040.2510100
droSim2
CGACGGGACAGTCCCGCTTGTGCACTTTCTTCGAAAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--ACGAT-------------------TCCC----CTCAT-TACAATTCTATTGTGC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CCCTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCCA............................2312.00200020000000000000
..............CGCTTGTGCACTTTCTTCGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200001010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGCCACTGTTTTACTCAGT..............2311.00100100000000000000
........................................TGGATGGAAGGTGAGTGTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCACTGTTTTACTCAG...............1911.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACGGCCACT..........................2711.00100010000000000000
......................................................................................ATT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGG.............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCCACTGTTTTACTCAG...............2111.00101000000000000000
..................................................................................................................................................................................................................................................GTTAGCGATTGCTTTGGGCCG-CGGGC...............................................................................................................................................................................................................................................................................................................2611.00100000000000100000
.......................ACTTTCTTCGAAAACCTTGGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...........................................................................................................................................................................................................................................................................GCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---...............................................................................................................................................................................................................2511.00100000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................GA---AGCCATGGCGATAGCGGGAT.....................................................................................................................................................................................2211.00100010000000000000
...............................................................................................................................................................................................................................................AA-GTTAGCGATTGCTTTGGGCCG-CGGGC...............................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGA....................................1511.00100000000001000000
..................................................................................................GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--A.........................................................................................................................................................................................................................................................................................................................................................................................................2020.50100000000000001000
......................................................................................................GAA------------------T---GGG------------------------------------A--AATGGGT--AT--------------------------------------G.................................................................................................................................................................................................................................................................................................................................................................1820.50100000000001000000
.....................GCACTTTCTTCGAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000010000000000
dm3
CGACGGGACAGTCCCGCTTGTGCACTTTCTTCGAAAACCTTGGATGGAAGGTGAGTGTCGTGGGTGGATTC--------------TATT---------GGGGG------------------------------------------AATGGG-----AAATGG---GA--AATGGGT--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCCGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--ACGAT-------------------TCCC----CTCAT-TACAATTCTATTGTGC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CCCTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..ACGGGACAGTCCCGCTTGTGCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23120.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020
..........GTCCCGCTTGTGCACTTTCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTGTTTTACTCAGT..............1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................T---------GGGGG------------------------------------------AATGGG-----AAATGG---G......................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000220000000
.......................................................................................................................................................................................................................................................................................................................................................................................ATGGCGATAGCGGGATTACCTTT..............................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCCACTGTTTTACTCAGT..............2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................T---------GGGGG------------------------------------------AATGGG-----AAATGG---GA--...................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................TTCGAAAACCTTGGATGGAAGGTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................GGGG------------------------------------------AATGGG-----AAATGG---GA--AATGGGT--..........................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGCATGTTAAATATTT.........................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACAAAGCAATGAGCATG...................................................................2012.0020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............CGCTTGTGCACTTTCTTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GTCCCGCTTGTGCACTTTCTTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...........TCCCGCTTGTGCACTTTCTTCGAAAACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATATTTT........................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000
.................................AAAACCTTGGATGGAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATA............................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000000
......GACAGTCCCGCTTGTGCACTTTCTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-..........................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTATTCCGCGTGCCTGAA...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGCAATGAGCATGTTAAATA............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACGGCCACTGTTTTACTCAGT..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................CGGGCCGCTCTGTAAGTAG-------------AGG---------------------------------------------------------A.......................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCCACT..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAAACGGCCACTGTTTTACTCAGT..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGAAAACCTTGGATGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..ACGGGACAGTCCCGCTTGTGCACTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGTGCCTGAAACGGCCACTGTT.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCTTGTGCACTTTCTTCGAAAACCTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTCCGCGTGCCTGAAAC.................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATATTTTCAG.....................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTCCGCGTGCCTGA....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGTGCCTGAAACGG...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CTTGGATGGAAGGTGAGTGTCGTGGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TCCTAGACTAAGGCAA-GTTAG.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATATT..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGTGCCTGAAACGGCCACT..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---.........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGTGCCTGAAACGGCCACTG.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TGTGCACTTTCTTCGAAAACCTTGGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CACTTTCTTCGAAAACCTTGGATGGAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................G-CGGGCCGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGG.....................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................CTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TG.............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACTTTCTTCGAAAACCTTGGATGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTCGAAAACCTTGGATGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................TTCTTCGAAAACCTTGGATGGAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................ATGG---GA--AATGGGT--AT--------------------------------------GCC--GAT..........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......GACAGTCCCGCTTGTGCACTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................T---------GGGGG------------------------------------------AATGGG-----AAATGG---GC--...................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGCAATGAGCATGTTA................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................................................................................................................................................................................................................G-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGC................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGTGCCTGAAACGGCCACTGT........................2511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GTCCCGCTTGTGCACTTTCTTCGAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AACCTTGGATGGAAGGTGAGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAGTCCCGCTTGTGCACTTTCTTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GAAAACCTTGGATGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......GACAGTCCCGCTTGTGCACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CACTTTCTTCGAAAACCTTGGATGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................T---------GGGGG------------------------------------------AATGGG-----AAATGG---.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................GTTAGCGATTGCTTTGGGCCG-....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGTTAAATATTTTCAG.....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTGTCGTGGGTGGATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...........................................ATGGAAGGTGAGTGTCGTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................TTCTTCGAAAACCTTGGATGGAAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTCGAAAACCTTGGATGGAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CCCGCTTGTGCACTTTCTTCGAAAACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGGGACAGTCCCGCTTGTGCACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCGTGCCTGAAACG................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTTCTTCGAAAACCTTGGATGGAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................A-GTTAGCGATTGCTTTGGGCC......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCGTGCCTGAAACGGCCACTG.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AAAACCTTGGATGGAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATATTTTCA......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAA...................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CACTTTCTTCGAAAACCTTGGATGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................C--GATCCTAGACTAAGGCAA-GT........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CATGGCGATAGCGGGATTACCTTTA--T..........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGC................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................GGGGG------------------------------------------AATGGG-----AAATGG---GA--...................................................................................................................................................................................................................................................................................................................................................................................................................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000
.................................AAAACCTTGGATGGAAGGTATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACGGCCACTGTTTTAC...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TT---------GGGGG------------------------------------------AATGGG-----AAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................GGGT--AT--------------------------------------GCC--GATCCTAGACTAA................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCCTGAAACGGCCACTGTTTT.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................TTCTTCGAAAACCTTGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGCATGTTAAATATTTT........................................................2111.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCACTTTCTTCGAAAACCTTGGATGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................GATTC--------------TATT---------GGGGG------------------------------------------AATGGG-----AAATGG---.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................GGGGG------------------------------------------AATGGG-----AAATGG---G......................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCCACTGTTTTACTATC...............2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
CGACAGGCCAGTCCCGTTTGTGCACCTTCTTTGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTGTATTGTATGTGTGTTTGTTT--T--------TGGGGGAAAAGGGAAGAAAAAGTTATT---GGG---------------------------------------AATGGGA--AT--------------------------------------GCC--GATCCTAGACTACGGCAA-GTTAGCTATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAAA----TGATTGAGCCATGGCGATAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CTCAT-TACAATTCTATTGTCC-C-GAAAAA-------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CTCTCSizeHit CountTotal NormTotal
No Reads
droBia1
CGACGGGACAGTCCCGGTTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTC--------------TC----------TGGGG-------------------------------------------GATGAT-----AAATGGCGGGA-CGATGGGA--AT--------------------------------------GCC--GATCCTAGACTTAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAACG---AAG---AGCCATGGCGGTAGCGGGATTACCTTTA--GAT--A----------------------CTCCC----CTCAT-TACAATTCTATTGTCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CTCTCSizeHit CountTotal NormTotal
No Reads
droTak1
CGACGGGACAGTCCCGGTTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTTCAT-TTTGTTCG--T--T-------TTGGGG---------------------------------------------AGG-------------------GATGGGA--CT--------------------------------------GCCTAGATCCTAGACTTAGGCGA-ATTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AAG---------------------------------------------------------AGAATGAAGAG----AGCCATGGCGGTAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CTCAT-TACAATTCTATTGTCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CTCTCSizeHit CountTotal NormTotal
No Reads
droEle1
CGACTGGCCAGTCCCGCCTGTGCACCTTTTTTGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTT-----------GTCG--T--------TGAGG-------------------------------------------GATGG-------------------GATGGGA--AT--------------------------------------GTC--GATCCTAGACTAAGGCAA-GATAGCGATTGCTTTGGGCCG-CGGGCTGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAATG---TGA---GGCCGTGGCTGCAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CACTT-TACAATTCTATTGCCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CTCTCSizeHit CountTotal NormTotal
No Reads
droRho1
CGACGGGCCAGTCCCGATTGTGCACCTTCTTTGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTT--------------------------TGGG--------------------------------------------------------------------GATGGGA--AT--------------------------------------GTC--GATCCTAGACTAAGGCAA-GATAGCGATTGCTTTGGGCAG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAAAG---TGA---AGCCATGGCTGCAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CACTT-TACATTTCTATTGCCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CTTTCSizeHit CountTotal NormTotal
No Reads
droFic1
CGACGGGACAGTCCCGATTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGG--AATC--------------TGTTTGGCTTTATG-GGGAT------------------T---GG-------------------G-----------------G--GATGGGA--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGAT--------ACCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAAAG---TGG---AGCCACGGCAGTAGCGGGATTACCTTTA--GAT--T----------------------C-CCC----CTCAT-TACCATTCTATTGCCC-C-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATT---CTCTCSizeHit CountTotal NormTotal
No Reads
droKik1
CGACGGGCCAGTCCCGATTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGG--AAGCA--------------AT------------GG-------------------------------------------GATGG-------------------GATGGGACCATGGGGGCATTTTGGGGGGATCCTGG--------------GGC--GATCCTAG-------------------------------------------TGTAAGTGGTGCCCAAGCAG--AGGCGGGCGA--CGGCG------------------------AA---------------AGAGGATGATGAGG---A---------GTAGCG---TCACCTTTA--GAGATA----------------------C-TCCCTCCTCTCTTAAAATTTCTATTGCCCCCTGAA----------AAC-C----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATG---CTCTCSizeHit CountTotal NormTotal
No Reads
droAna3
CGACCGGCCAGTCCCGTCTGTGCACCTTTTTCGAGAACCTTGGATGGAAGGTGAGTGTCGCGGGTG-TTGCAAG-TTT----GTTT--T-------TTGGGGT-----------------T---AATGAT---------------------------------------AATAGG----------------------------------------------------ATAGACTAAGGCTA-----------------------AGGGCAGCTTCGTAAGTAGTGCCC----CCAA---TGGG-----------------------------------ATAGGGAATGGGAATGGGAATGGGAGGT---------------GATGCGGGTTCATTTTTTTGGTT--ACAACTCCTGATACAGAATGATAC---T----CTTGT-TAAATTCTTATTGCCCCC-GAA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATG---CTCTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................TGGATGGAAGGTGAGTGTCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000002
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACGGC..............................2311.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCTTATTGCCCCC-GA...........................................................................................................1911.001001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCC.............................2211.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAACGGCCACTGTTTTACTCAG...............2511.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACGGCCACTGTTTTA....................1911.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTGTTTTACTCAGGTAA...........2011.001100000
.......................................................................................................................................................................................................................................................................................................A---TGGG-----------------------------------ATAGGGAATGGGAATGGG........................................................................................................................................................................................................................2311.001000010
...........................................ATGGAAGGTGAGTGTCGCGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACGGCCACTGTTTTACTCAGT..............2511.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAAC.................................1811.001001000
...........................................................................................................................................................................................................................................................................................................TGGG-----------------------------------ATAGGGAATGGGAATGG.........................................................................................................................................................................................................................2111.001100000
...............................................AAGGTGAGTGTCGCGGGTG-TT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................................................................................................................................................................................................................................................................................................A---TGGG-----------------------------------ATAGGGAATGGGAATGGT........................................................................................................................................................................................................................2311.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCACTGTTTTACTCAG...............1911.001000001
............................TTTCGAGAACCTTGGATGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....................................................................................................................................................................................................................................................................................................................................................AGGGAATGGGAATGGGAATGG...................................................................................................................................................................................................................2140.753011010
.......................................................................................................................................................................................................................................................................................................................................................GAATGGGAATGGGAATGGGA.................................................................................................................................................................................................................20200.65132000110
....................................................................................................................................................................................................................................................................................................................................................AGGGAATGGGAATGGGAATGGGA.................................................................................................................................................................................................................2340.502000002
....................................................................................................................................................................................................................................................................................................................................................AGGGAATGGGAATGGGAATGGG..................................................................................................................................................................................................................2240.251010000
.......................................................................................................................................................................................................................................................................................................................................................GAATGGGAATGGGAATGGG..................................................................................................................................................................................................................19200.255010004
.......................................................................................................................................................................................................................................................................................................................................................GAATGGGAATGGGAATGG...................................................................................................................................................................................................................18200.204000040
....................................................................................................................................................................................................................................................................................................................................................AGGGAATGGGAATGGGAATG....................................................................................................................................................................................................................2050.201100000
....................................................................................................................................................................................................................................................................................................................................................AGGGAATGGGAATGGGAAT.....................................................................................................................................................................................................................1980.131010000
.....................................................................................................................................................................................................................................................................................................................................................GGGAATGGGAATGGGAATG....................................................................................................................................................................................................................19200.102000020
.....................................................................................................................................................................................................................................................................................................................................................GGGAATGGGAATGGGAATGG...................................................................................................................................................................................................................20200.051000010
......................................................................................................................................................................................................................................................................................................................................................GGAATGGGAATGGGAATGG...................................................................................................................................................................................................................19200.051100000
droBip1
CGACTGGCCAGTCCCGCCTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGGGGGTG-TTGCA--------------A-------------------------------------------------------------------------------------GGGG--AT--------------------------------------GCTAGG---ATAGACTAAGGCTAAG---GCGATTGCTTCGGGATGGGGGGCAGCTCCGTAAGTAGTGCCC----CTGA---TGGGTGA--CGGCGG------------------------A---------------GGAGTGGGAGCA---------------GAAGCGGGTTCACTTTTT--CTT--A----------------------C------------------TTCTTATTGCCC-C-CGA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATG---CTCTCSizeHit CountTotal NormTotal
No Reads
dp5
CAACGGGCCAGTCCCGTCTGTGCACGTTCTTTGAGAACCTGGGATGGAAGGTAAGTGTTGTGGGGC-ATTC--------------CATT---------CGGGT-----------------------------------------------------------------------------------ATTC-GGGGGTACCATTAGGTAGAAAAGGCCTGCGAGG--------CTT------G---AGC-TTTGTTTTGGGCCA-CGGGCAGC--TGTAAGTAGTGCCCAATCCTGG---TGGGCCAATCAGCGGGCAGAAGGCAGTAACAGACTAAGAA---------------AGAACCCGCTT----------------------AGAATATCT--C--AAT--ATCTC-------------------TTTC----TTTCG-TACCTTCCTATTGCCC-C-GCA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTGTTCCGCGTGCCTGAAACGGCCACTGTGTTACTCAGGTAAATG---CTCTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCGCGTGCCTGAAACGGCCACT..........................2511.0010100000000
.............CCGTCTGTGCACGTTCTTTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AT--ATCTC-------------------TTTC----TTTCG-TACCTTCCT.......................................................................................................................2511.0010001000000
.........................................................................................................................................................................................................................................TT------G---AGC-TTTGTTTTGGGCCA-CGGG................................................................................................................................................................................................................................................................................................................2411.0010100000000
....GGGCCAGTCCCGTCTGTGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGAAACGGCCACTGTG.......................2011.0010100000000
...............................TGAGAACCTGGGATGGAAGGTGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
............................................................................................................................................................................................................................GAGG--------CTT------G---AGC-TTTGTTTTGGGC.......................................................................................................................................................................................................................................................................................................................2311.0010100000000
................................GAGAACCTGGGATGGAAGGTGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
................................GAGAACCTGGGATGGAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000010
............................................................................................................................................................................................................................GAGG--------CTT------G---AGC-TTTGTTTTGGG........................................................................................................................................................................................................................................................................................................................2211.0010000100000
...............................TGAGAACCTGGGATGGAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
.....GGCCAGTCCCGTCTGTGCACGTTCTTTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
...............................TGAGAACCTGGGATGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000001000
droPer2
CAACGGGCCAGTCCCGTCTGTGCACGTTCTTTGAGAACCTGGGATGGAAGGTAAGTGTTGTGGGGC-ATTC--------------CATT---------CGGGT-----------------------------------------------------------------------------------ATTC-GGGGGTACCATTAGGTAGAAAAGGCCTGCGAGG--------CTT------G---AGC-TTTGTTTTGGGCCA-CGGGCAGC--TGTAAGTAGTGCCCAATCCTGG---TGGGCCAATCAGCGGGCAGAAGGCAGTAACAGACTAAGAA---------------AGAACCCGCTT----------------------AGAATATCT--C--AAT--ATCTC-------------------TTTC----TTTCG-TACCTTCCTATTGCCC-C-GCA----------AACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTGTTCCGCGTGCCTGAAACGGCCACTGTGTTACTCAGGTAAATG---CTCTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGGCCACTGTGTTACTCAGT..............2412.002200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAACGGCCACTGTGTTACTCAGT..............2612.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGCCACTGTGTTACT..................1912.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGGCCACTGTGTTACTCAGG..............2411.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCGCGTGCCTGAAACGGCCACT..........................2511.001001000
............................................................................................................................................................................................................................................................................................................GGGCCAATCAGCGGGCAGAAGGC.........................................................................................................................................................................................................................................................2311.001001000
............................CTTTGAGAACCTGGGATGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
............................................................................................................................................................................................................GGTAGAAAAGGCCTGCGAGG--------CTT------G---AGC-T..................................................................................................................................................................................................................................................................................................................................2811.001000001
................................GAGAACCTGGGATGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
...........................TCTTTGAGAACCTGGGATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
............................CTTTGAGAACCTGGGATGGAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000
...........TCCCGTCTGTGCACGTTCTTTGAGAACCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCGCGTGCCTGAAACGGCCACT..........................2711.001001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAACGGCCACTGTGTTACTCAGG..............2611.001100000
..................TGTGCACGTTCTTTGAGAACCTGGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
droWil2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT-C-GAA----------AATTCGAACGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTTTTCCGCGTGCCTGAAACGGCCACTGTATTACTCAGGTAAATG---CCTAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCGCGTGCCTGAAACGGC..............................2111.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCGCGTGCCTGAAACGGCCACT..........................2511.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGAAACGGCCACTGTATTACTCAG...............2811.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATGAGCATGTTAAATATTTTCAG.....................................................2711.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTCCGCGTGCCTGAAACGGC..............................2511.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCCACTGTATTACTCAG...............2111.00110000
droVir3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-CACAACAAAATTATCC-C-AAAAACAAATCGCAACTC----GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTACTACTCAGGTAAATG---CCTT-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTGTACTACTCAG...............1711.001000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAATGAGCATGTTAAATATTTTCAG.....................................................2811.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTCCGCGTGCCTGAAA..................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCCACTGTACTACTCAGG..............2111.001010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGCATGTTAAATATTT.........................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCCACTGTACTACTCAGC..............2211.001010000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGAAACGGCCACTGTACTACTC.................2611.001100000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATATTT.........................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTGTACTACTCAGC..............1811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCC.............................2211.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCGTGCCTGAAACGGCCACT..........................2411.001000000000000000000000000000000001000000000000000000000000000000
droMoj3
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCGACAGTTCTACTCAGGTAAATGCATCAATCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGTTCTACTCAGGT.............1811.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATATTTTCA......................................................2511.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCGACAGT........................2711.001000001
droGri2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------ATCTC----GAAACAAAGCAATGAGCATGTTCAATATTTTCAGGTGTTCCGCGTGCCTGAAACGGCCACTGTACTACTCAGGTAAATG---CCTTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/17/2015 at 10:49 PM