ID:

dya_548

 Coordinate:

2R:11969744-11969894 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.6 -9.9 -9.7

Flybase annnotation

exon [dyak_GLEANR_12465:7]; CDS [Dyak\dom-cds]; exon [Dyak\snoRNA:GE27039:1]; snoRNA [Dyak\snoRNA:GE27039-RA]; intron [Dyak\dom-in]

No Repeatable elements found

Sense Strand Reads

#################################################################################################################################------------------------------------------------------------------------##################################################
ACTCTGTGTCACATTAGAACTAGCTTCGTGTGATGACAATTTGTTAGTTTGCCAAATCAACGAGATTCGTCTTATCCATGTGGTCATGTTCTTACCAATTTGCTCACATTGAAAACGACCCTAACATGAGCCTCTAAAAATATCCGCAATTTCAAACTATATGCGCAGTAATTAGAATTTTGCTTTTGTTTCTCCGTACAGGTGATTCGTCCGTTCTTGCTTCGACGCCTCAAGAAGGAGGTGGAAAAACA
*********************************************************((...((..((((....((.((((((.((.(((......))).)).)))))).))..))))..))....)).************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M056
embryo
 V120
male body		 M043
female body
 GSM1528802
follicle cells		 V058
head
 V046
embryo
 V052
head
.......................................................................................................TCACATTGAAAACGACCCTAACATGA.......................................................................................................................... 26 0 1 21.00 21 2 0 3 16 0 0 0
....................................................................................................TGCTCACATTGAAAACGACCCTAACATGA.......................................................................................................................... 29 0 1 8.00 8 0 0 0 8 0 0 0
...............................GATGACAATTTGTTAGTTTGCC...................................................................................................................................................................................................... 22 0 1 7.00 7 4 1 2 0 0 0 0
................................................TTGCCAAATCAACGAGATTCGTC.................................................................................................................................................................................... 23 0 1 6.00 6 6 0 0 0 0 0 0
................................................TTGCCAAATCAACGAGATTCGTCT................................................................................................................................................................................... 24 0 1 6.00 6 0 5 0 0 0 1 0
................................................TTGCCAAATCAACGAGATTCGTCTTATCC.............................................................................................................................................................................. 29 0 1 4.00 4 3 1 0 0 0 0 0
............................................................................................................TTGAAAACGACCCTAACATGA.......................................................................................................................... 21 0 1 4.00 4 0 1 2 1 0 0 0
...........CATTAGAACTAGCTTCGTGTGATGAC...................................................................................................................................................................................................................... 26 0 1 4.00 4 0 4 0 0 0 0 0
................................................TTGCCAAATCAACGAGATTCGTCTT.................................................................................................................................................................................. 25 0 1 4.00 4 2 1 1 0 0 0 0
................................................TTGCCAAATCAACGAGATTCGTCTTATC............................................................................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0 0
.................AACTAGCTTCGTGTGATGACA..................................................................................................................................................................................................................... 21 0 1 3.00 3 0 3 0 0 0 0 0
.........................................................CAACGAGATTCGTCTTATCCATGTGGTC...................................................................................................................................................................... 28 0 1 3.00 3 0 1 2 0 0 0 0
................................................TTGCCAAATCAACGAGATTCGT..................................................................................................................................................................................... 22 0 1 3.00 3 1 1 0 0 1 0 0
................................................................ATTCGTCTTATCCATGTGGTCATGT.................................................................................................................................................................. 25 0 1 3.00 3 0 1 1 0 1 0 0
................................................................ATTCGTCTTATCCATGTGGTC...................................................................................................................................................................... 21 0 1 2.00 2 0 0 2 0 0 0 0
..............................................................................................................GAAAACGACCCTAACATGA.......................................................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0 0
.......GTCACATTAGAACTAGCTTCGTGT............................................................................................................................................................................................................................ 24 0 1 2.00 2 0 1 0 0 0 1 0
....TGTGTCACATTAGAACTAGCTTCGTGT............................................................................................................................................................................................................................ 27 0 1 2.00 2 0 1 1 0 0 0 0
...................................................................CGTCTTATCCATGTGGTCATGT.................................................................................................................................................................. 22 0 1 2.00 2 0 1 1 0 0 0 0
............................................................CGAGATTCGTCTTATCCATGTGGTC...................................................................................................................................................................... 25 0 1 2.00 2 0 1 0 0 0 0 1
...........................................................................................................ATTGAAAACGACCCTAACATGA.......................................................................................................................... 22 0 1 2.00 2 0 1 1 0 0 0 0
........................................................TCAACGAGATTCGTCTTATCCATGTGGTC...................................................................................................................................................................... 29 0 1 2.00 2 1 1 0 0 0 0 0
............................................................................................................................................................................................................ATTCGTCCGTTCTTGCTTCGACGCCT..................... 26 0 1 2.00 2 1 0 1 0 0 0 0
................................................TGGCCAAATCAACGAGATTCGTC.................................................................................................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0
....................................................................................CGTGTTCTTACCAATTTGCTCAC................................................................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................TTGAAAACGACCCGAACATG........................................................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0
...........................................................................................TTACCAATTTGCTCACATTGAAAAC....................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0
............................................................................................................TTGTAAACGACCCTAACA............................................................................................................................. 18 1 1 1.00 1 1 0 0 0 0 0 0
...............................................TTTGCCAAATCAACGAGATTCGTCTTA................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 1 0
...............................GATGACAATTTGTTAGTTTGCCAAA................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0
.......................................................................................GTTCTTACCAATTTGCTCACATTGAAAAC....................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0
................................................TTGCCAAATCAACGAGATTCGTCTTA................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................CAATTTGCTCACATTGAAAACGACCC.................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
.....................................AATTTGTTAGTTTGCCAAATCAACGA............................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0
................................ATGACAATTTGTTAGTTTGCC...................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................TTTGCTCACATTGAAAACGACC................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................TCTGACCAATTTGCTCACATTG............................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................AGATTCGTCTTATCCATGTGGTC...................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0
...........................................................................................................................................................................................................GGTTCGTCCGTTCTTGCTTCGACGCCT..................... 27 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGCTTCGACGCCTCAAGAAGGA............ 22 0 1 1.00 1 1 0 0 0 0 0 0
...........CATTAGAACTAGCTTCGTGTGAT......................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................TCACATTGAAAACGACCCTAAC.............................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 1 0
.........................................................CAACGAGCTTCGTCTTATCCATGTGGTC...................................................................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0
..........................................................AAAGAGATTCGTCTTATCCATGTGGTC...................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0
...............................................TGTGCCAAATCAACGAGATTCGTC.................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TCTTGCTTCGACGCCTCAAGAAGGAGGT......... 28 0 1 1.00 1 1 0 0 0 0 0 0
...............................GATGACAATTTGTTAGTTTGC....................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...........CATTAGAACTAGCTTCGTGTGATGACA..................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0
...............................................CTTGCCAAATCAACGAGATTCGTCT................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
............................................................CGAGATTCGTCTTATCCATG........................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
....................................CAATTTGTTAGTTTGCCAAAT.................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................ATTGAAAACGACCCTAACATGAG......................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0
................................................TCGCCAAATCAACGAGATTCGC..................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
...............................................TTTGCCAAATCAACGAGATTCGTCTT.................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 1 0
.............................................................................................................................................................................................................TTCGTCCGTTCTTGCTTCGACGCCT..................... 25 0 1 1.00 1 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................AGAAGGAGGTGGAAAAAC. 18 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TGCTCACCTTGAAAACGACCCTAACATGA.......................................................................................................................... 29 1 1 1.00 1 0 0 0 1 0 0 0
.................................................TGCCAAATCAACGAGATTCGTCTTATC............................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.................................TGACAATTTGTTAGTTTGCCAAAT.................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
................................................TTGCCAATTCAACAAGATTCG...................................................................................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0
............................................................................................................................................................................................................ATTTGTCCGTTCTTGCTTCGACGCC...................... 25 1 1 1.00 1 1 0 0 0 0 0 0
...........CATTAGAACTAGCTTCGTGTG........................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
...........................................................ACGAGATTCGTCTTATCCATGTGGT....................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
...............................................TTTGCCAAATCAACGAGATTCGTCTTAT................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0
................GAACTAGCTTCGTGTGAT......................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0
................................................TTGTCAAATCAACGAGATTCGTC.................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTCGTCTTATCCATGTGGTC...................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
...............................................TTTGCCAAATCAACGAGATTCGT..................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................................CATTGAAAACGACCCTAACATGA.......................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0
..........................................................AACGAGATTCGTCTTATCCATGTGGTC...................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................TTGAAAACGACCCTAACATG........................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0
............ATTAGAACTAGCTTCGTGTGATGAC...................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
......................................ATTTGTTAGTTTGCCAAATCAAC.............................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0
............ATTAGAACTAGCTTCGTGTG........................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
..............................................................AGATTCGTCTTATCCATGTGGTCATGT.................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0
..............................................................AGATTCGTATTATCCATGTGGTC...................................................................................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0
................................................................ATTCGTCTTATCCATGTGGT....................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0
................................................................................................AATTTGCTGACATTGAAAACGACCCT................................................................................................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0
............................................................................................................................................................................................................AGTCGTCCGTTCTTGCTTCGACGCCT..................... 26 1 1 1.00 1 1 0 0 0 0 0 0
...........CATTAGAACTAGCTTCGTGT............................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................CACATTGAAAACGACCCTAACATGA.......................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0
..................................................................................................................ACGACCCTAACATGA.......................................................................................................................... 15 0 1 1.00 1 0 0 0 1 0 0 0
.................................................................................................ATTTGCTCACATTGAAAACGACCCT................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0
.................................................TGCCAAATCAACGAGATTCGTCTT.................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................ACATTGAAAACGACCCTAAC.............................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0
..........ACATTAGATCTAGCTTCGTGT............................................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0
...........................................................................................................................................................................................................GATTCGTCCGTTCTTGCTTCGACGCCT..................... 27 0 1 1.00 1 0 0 1 0 0 0 0
..............................................GTTTGCCAGATCAAGGAGATGCGT..................................................................................................................................................................................... 24 3 1 1.00 1 0 0 0 0 1 0 0
...................................................................................................TTGCTCACATTGAAAACGACCCTAAC.............................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0
.........................................................................ATCCATGTGGTCATGTTCTTACC........................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................ACATTGAAAACGACCCTAACATGA.......................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.........CACATTAGAACTAGCTTCGTGT............................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................ATGTTCTTACCAATTTGCTCACATTG............................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................CAAGAAGGAGGTGGAAAAACA 21 0 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................TTGCTCACATTGAAAACGACCC.................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0
..................ACTAGCTTCGTGTGATGACAATTTGT............................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0
....................................................................................CATGTTCTTACCAATTTGCTCAC................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0
......TGTCACATTAGAACTAGCTTCGTGT............................................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0
......................................ATTTGTTAGTTTGCCAAAT.................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0
...............................GATGACAATTTGTTAGCTTGCC...................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................CAACGAGATTCGTCTTATCCATGTGGT....................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
...............................................TTTGCCAAATCAACGAGATTCGTC.................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.............TTAGAACTAGCTTCGTGT............................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 1
..........ACATTAAAACTAGCTTCGTGTG........................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 1
.......................CTTCGTGTGATGACAATTTGTTAGTT.......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0
................................ATGACAATTTGTTAGTTTGCCAAAT.................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0
............ATTAGAACTAGCTTCGTGTGA.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0
......................................................AATCAACGAGATTCGTCTTATCC.............................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................TCACATTGAAATCGACCCTAACATGA.......................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0
.....................GGCTTCGTGTTATGACAA.................................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 1 0 0 0 0
.....................................................................TCTTAACCTTGTGGTCGTG................................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0

Anti-sense strand reads

TGAGACACAGTGTAATCTTGATCGAAGCACACTACTGTTAAACAATCAAACGGTTTAGTTGCTCTAAGCAGAATAGGTACACCAGTACAAGAATGGTTAAACGAGTGTAACTTTTGCTGGGATTGTACTCGGAGATTTTTATAGGCGTTAAAGTTTGATATACGCGTCATTAATCTTAAAACGAAAACAAAGAGGCATGTCCACTAAGCAGGCAAGAACGAAGCTGCGGAGTTCTTCCTCCACCTTTTTGT
**************************************************************************************************************************((...((..((((....((.((((((.((.(((......))).)).)))))).))..))))..))....)).********************************************************* 		Read size # Mismatch Hit Count Total Norm Total M056
embryo
 V058
head
 M043
female body
..................................................CGGTTTAGTTGCTCTAAGCAGAA.................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0
.....................................................................................................................................................................................CAAAAGCCAAGAGGCATGTC.................................................. 20 3 4 0.25 1 0 1 0
.................................................................................CCAGTCCGAGAATGGTTGAA...................................................................................................................................................... 20 3 12 0.08 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2R:11969694-11969944 - dya_548 ACTCTGTGTCACATTAGAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAAATCAAC------GAGATTCGTCTTATCCATGTGGTCATGTT----CTTACCAATTTGCTCACATTGAAAACGACCCTAACATGAGCCTCT------AA-AA------------------ATA-TCCG--CAATTTCAAA------CT-A----TAT-G--CGCAGTAATTAG---------AAT----T---TTGCTTTTGTTTC--TCCGTACAGGTGATTCGTCCGTTCTTGCTTCGACGCCTCAAGAAGGAGGTGGAAAAACA
droEre2 scaffold_4845:11362221-11362474 + der_1105 ACTCTGTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCATGTT----CTT-CCAATTTGTTCACATTGAATACGCCCCTAACATGACCCTCCTATT-TTA-AG------------------TTA-TCCG--TTATTTCAAA------CT-A----TAT-G--CGCAGTAATTAG---------AAT--------TTGCGTTTGTTTC--TCCGTACAGGTGATTCGTCCGTTCTTACTTCGACGCCTCAAGAAGGAGGTTGAAAAACA
droSec2 scaffold_9:549822-550076 + dse_1613 ACTCTGTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCTAAGTT----CTTACCAATTTGTTCACATTGAAAACGCCCCTAACATGACCCTCTTA--TTTA-AG------------------TTA-TTCG--TATTTTCAAA------CT-A----AAT-G--CGAAGTAATTAG---------AAT----T---TTGCTTTTGTTTC--TCCGTAAAGGTGATTCGTCCGTTCCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACA
droSim2 2r:17772874-17773128 + dsi_2204 ACTCTGTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAA------GAGATGCGTCTTATCCATGTGGCTAAGTT----CTTACCAATTTATTCACATTGAAAACGCCCCTAACATGACCCTCTTA--TTTA-AG------------------TTA-TCCG--TATTTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------AAT----T---TGGCTTTTGTTTT--TCCGTACAGGTGATTCGTCCGTTTCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACA
dm3 chr2R:17218420-17218674 + ACTCTGTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCTGAGTT----CTTACCAATTTATTCACATTGAAAACGCCCCTAACATGACCCTCTTA--TTTA-AG------------------TTA-TCCT--TATTTTCAAA------AT-A----AAT-G--CGCAGTAATTAG---------AAT----T---TGGCTTTTGTTTC--TCCGTACAGGTGATTCGTCCGTTCCTACTTCGACGCCTCAAAAAGGAGGTGGAAAAACA
droEug1 scf7180000409474:724021-724279 - ACTCTGTGTCACATTTAAAT---G---T-AGCCTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGCTCAGGTT----CTTATCAGGCTGCTCACATTGAAAACGCCCCTAACACAATTGCATTTAT-AGC-C-----------------TATT-CTTTA--TAATTTCAAA------TTTA----AAT-G--CGCAGTAATCAG---------CAT----A---TTGCTTTTGTTTT--TCCGTACAGGTGATTCGTCCGTTCCTACTTCGACGTCTCAAGAAGGAGGTTGAAAAACA
droBia1 scf7180000302143:1187983-1188239 - ACTCTGTGTCACATTAAAAC---A---T-AGCCTCGTGTGACGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCAAGAT----CTAACC-AGTTGCTCACATTGAAAACGCCCCTGACACGACCATCTTTAC-AAA-A-----------------AGTT-CTCCG--TAATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTCCTCTTATTTT--TCCATACAGGTAATTCGTCCGTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAACA
droTak1 scf7180000415722:109524-109781 + ACTCTGTGTCACATTAAAAC---A---T-AGCATCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCCAAGAA----CTAACCAAGTTGCTCACATTGAAAACGCCCCTAACACGACAGCCCTTTT-AAA-A-----------------TATT-TCCCG--TAGTTACAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCTTTTGTTTT--TCCCTACAGGTGATTCGTCCGTTCCTACTTCGTCGCCTCAAGAAGGAGGTGGAAAAACA
droEle1 scf7180000491232:155379-155633 - ACTCTGTGTCACTTTGATAT---T---T-AGCCTCATGTGATGACAATTTGTCAG-TTTGCCAGATAAAG------GAGATGCGTCTTATCCATGTGGTCAAGTT----CACACCATGTTGCTCACATTGAAAACGCCCCTAACACCATATT---TTT-ATA-AC-----------------AT-ATTCCA--TAATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCCCTTATTCT--TCCGTGCAGGTGATTCGTCCGTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAACA
droRho1 scf7180000780265:149689-149946 - ACTCTGTGTCACTTTGATAT---T---T-AGCCTCAAGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCAAATT----TTAACCAAGTTGCTCACATTGAAAACGCCCCTAACACCACCATATTAAA-CAA-A-----------------TATT-TTCCG--TAATTTCAAA------CT-A----AAT-G--CGCAGTAAATAG---------CAT----A---TTGTCTTTGTTTT--TACGTGCAGGTGATTCGTCCTTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAGCA
droFic1 scf7180000453811:50251-50504 - ACTCTGTGTCACATTAAAT----A---T-ATCCTCGTGTGATGACAATTTGTTAG-TTTGCCAGATTAAG------GGGGTGCGTCTTATCCATGTGGTCAAGTT----TCCATCAAGCTGTTCACATTGAAAACGCACCTGACAGGATTAT--TAG--TAAAA------------------ATT-TCCCT--TCATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCACTTGTTTC--TCCGTGCAGGTGATTCGTCCGTTCCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACA
droKik1 scf7180000302411:448024-448283 + ACTCTGTGTCACATTGATTT-------TACACCTCGTGTGATGACAATTTGTTAG-TTTGCCAAAGGAAA------GAGTGGCGTCTTATCCATGTTCTCAATTTTAACCC--TCAAGTTGATCACATTGAAAATGCTTCTTACACCACCTTT--A--CTTA-TGAT--------------TCATA-ACCT--TAATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCAATTGTTTA--TCCCTGCAGGTGATTCGTCCCTTCCTACTCCGACGCCTCAAGAAGGAGGTGGAGAAGCA
droAna3 scaffold_13266:5021103-5021319 + AGCCTGTGTCACAT---------A---T-TGCCTCGTGTGATGACACTGTTTTAG-TTTGCCAGATCGAA------GAGGTGCGTCGTGTCCGTGTGGTCTTATC----CCTAGCCAATAGATTGCATAGAATTAGCATCAAACATGTGGTTTACA--TTCA-AG------------------TTT-TCAC--AA---------------------------------------------------------------CCTCTTCTTTC--TCCTTACAGGTGATTCGTCCCTTCCTGCTGCGTCGCCTCAAGAAGGAGGTGGAGAAACA
droBip1 scf7180000395751:830626-830823 + AGCCTGTGTCACACT------------C-TGCCCCAAGTGATGACACTGTTTTAG-TTTGCCAGATCGAT------GAGGTGCGTC-TATCCATGTGGTCTTGCC----CTAGCC-TATAGATTACGTTGAATTAGCATCAGACATTACCACA--A------------------------------------------------------------------------------------------------------CCTCTCCTTTA--TCCTTGCAGGTGATTCGTCCTTTCCTGCTGCGTCGCCTCAAGAAGGAGGTGGAGAAACA
dp5 3:9794773-9795054 - dps_1133 ACTCTGTGTCACATTGAAAC---A---C-AGCCTCATGTGATGACAATTTGTTAG-TTTGCTAGATCAAGTGG-GAACGGGGCGTCTTATCCATGTGGTTGGTCT----ATGACCAAGCTAATCACATTGAAAACGCTCCTTACACGACCTCACCGC---TA-TGATAGCAGCACTAAGCA--CTA-TCCTCCTAGTTTTAAG------CT-T----AATCT--CGCTGTAATTGA---------CAC----TTTTTCGTCCTTGTGTG--TCCTTGCAGGTGATTCGGCCGTTCCTGCTGCGACGCCTCAAGAAGGAGGTGGAGAAGCA
droPer2 scaffold_4:5110215-5110496 - dpe_1606 ACTCTGTGTCACATTGAAAC---A---C-TGCCTCATGTGATGACAATTTGTTAG-TTTGCTAGATCAAGTGG-GAACGGGGCGTCTTATCCATGTGGTTGGTCT----ATAACCAAGCTAATCACATTGAAAACGCTCCTTACACGACCTCACCGC---TA-TGATAGCAGCACTAAGCA--CTA-TAATCCTAGTTTTAAG------CT-T----AATAT--CGCTGTAATTGA---------CAC----TTTTTCGTCGTTGTGTG--TCCTTGCAGGTGATTCGGCCGTTCCTGCTGCGACGCCTCAAGAAGGAGGTGGAGAAGCA
droWil2 scf2_1100000004510:1473319-1473553 + dwi_419 ACTCTGTGTCACATTCGA---------C-AACCTCATGTGAATACAATTTGTAAT-TTTGCCAGAGTAAG------GTGTAGCTTCTTATCCATGTGATAAGATT----CCTAACAAGCTAATCACTTTGACGATGTCTAAGACAG--CTTTT---------------------------------------------TCAGT------TC-AATTGAT------AAAGTGACTC--ATG-----TTT----A---TTCTCTTTGTCTGTCTTTTATTAGGTTATACGACCCTTTCTGTTGCGTCGTCTCAAAAAGGAAGTGGAGAAGCA
droVir3 scaffold_12875:18061323-18061578 - dvi_7640 ACTCTGTATCACATAAAATTTTTA---T-AACCTCATGTGA-GACAATTTAATAC-CTTGCTAGATTAAATTA---AAGCTGCGACTTATCCATGTGTTCGTGTC----CTTAT--AACTGATCACATTGAATACGCGCTATACACTAGTTC-TTG--AATA-AA------------------T-A-TTCC--TAATTATAAG------T----------------CAGTAA---GCATGTTTTGATTG---T---TTATTTTTCTTTT--TTTATTCAGGTCATTCGTCCATTTCTGCTGCGTCGCCTTAAAAAGGAGGTGGAAAAGCA
droMoj3 scaffold_6496:11682417-11682671 - dmo_1100 ACTCTGTGTCACATTGAAT----------TATCTCATGTGATGACAATTTGTTACCCTTGCTAGAGTAAGTTGATGAAGCTGCGACTTATCCATGTGATTGAGTT----TTT-CC-AGCTGATTGCATTGAATGCGCGCTTTACATTACTTT--TA--TTCA-TAT---------------ATTT-ATATA-------TCAGTATCAATTT-G----AGA-A--AGTATTAA-------------AATACCTA--------TTTCTCTT--TCTTTATAGGTTATTCGTCCATTTCTGCTGCGTCGGCTTAAAAAAGAGGTGGAGAAGCA
droGri2 scaffold_15245:4190051-4190313 - ACTCTGTGTCACATTGATTTTCAATAAC-AACCACATGTGATGACAATTTGTTAA-CTTGCTAAACTAAATCT--AAAGCTGCGACTTATCCATGTGATCGTGTC----CTTTCA-AAATTATCACATTGAATACGCGCTTTACACTCCT-TATTTAT-ATG-C-----------------ATTT-TGATG--TTGTTTTAAT------TT-G----AGC-AATCGTGTTAATCAA----------TT----A---TTGTTTTTAT------TTACATAGGTCATTCGTCCATTTTTGCTGCGACGCCTTAAAAAGGAGGTGGAGAAGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
ACTCTGTGTCACATTAGAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAAATCAAC------GAGATTCGTCTTATCCATGTGGTCATGTT----CTTACCAATTTGCTCACATTGAAAACGACCCTAACATGAGCCTCT------AA-AA------------------ATA-TCCG--CAATTTCAAA------CT-A----TAT-G--CGCAGTAATTAG---------AAT----T---TTGCTTTTGTTTC--TCCGTACAGGTGATTCGTCCGTTCTTGCTTCGACGCCTCAAGAAGGAGGTGGAAAAACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................TCACATTGAAAACGACCCTAACATGA......................................................................................................................................................................................26121.0021032000000016
.......................................................................................................................TGCTCACATTGAAAACGACCCTAACATGA......................................................................................................................................................................................2918.00800000000008
.......................................GATGACAATTTGTTAG-TTTGCC............................................................................................................................................................................................................................................................................2217.00702400010000
.........................................................TTGCCAAATCAAC------GAGATTCGTC....................................................................................................................................................................................................................................................2316.00600600000000
.........................................................TTGCCAAATCAAC------GAGATTCGTCT...................................................................................................................................................................................................................................................2416.00600010050000
.........................................................TTGCCAAATCAAC------GAGATTCGTCTTATCC..............................................................................................................................................................................................................................................2914.00400300010000
...............................................................................................................................TTGAAAACGACCCTAACATGA......................................................................................................................................................................................2114.00402000010001
...........CATTAGAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2614.00400000040000
.........................................................TTGCCAAATCAAC------GAGATTCGTCTT..................................................................................................................................................................................................................................................2514.00401200010000
.........................................................TTGCCAAATCAAC------GAGATTCGTCTTATC...............................................................................................................................................................................................................................................2813.00300300000000
.................AAC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2113.00300000030000
..................................................................CAAC------GAGATTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2813.00302000010000
.........................................................TTGCCAAATCAAC------GAGATTCGT.....................................................................................................................................................................................................................................................2213.00300100110000
...............................................................................ATTCGTCTTATCCATGTGGTCATGT..................................................................................................................................................................................................................................2513.00301000110000
...............................................................................ATTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2112.00202000000000
.................................................................................................................................GAAAACGACCCTAACATGA......................................................................................................................................................................................1912.00202000000000
.......GTCACATTAGAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2412.00200010010000
....TGTGTCACATTAGAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2712.00201000010000
..................................................................................CGTCTTATCCATGTGGTCATGT..................................................................................................................................................................................................................................2212.00201000010000
.....................................................................C------GAGATTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2512.00200001010000
..............................................................................................................................ATTGAAAACGACCCTAACATGA......................................................................................................................................................................................2212.00201000010000
.................................................................TCAAC------GAGATTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2912.00200100010000
...........................................................................................................................................................................................................................................................................................ATTCGTCCGTTCTTGCTTCGACGCCT.....................2612.00201100000000
..............................................................................................................TTACCAATTTGCTCACATTGAAAAC...................................................................................................................................................................................................2511.00101000000000
........................................................TTTGCCAAATCAAC------GAGATTCGTCTTA.................................................................................................................................................................................................................................................2711.00100010000000
.......................................GATGACAATTTGTTAG-TTTGCCAAA.........................................................................................................................................................................................................................................................................2511.00101000000000
......................................................................................................GTT----CTTACCAATTTGCTCACATTGAAAAC...................................................................................................................................................................................................2911.00101000000000
.........................................................TTGCCAAATCAAC------GAGATTCGTCTTA.................................................................................................................................................................................................................................................2611.00100000010000
..................................................................................................................CAATTTGCTCACATTGAAAACGACCC..............................................................................................................................................................................................2611.00100100000000
.............................................AATTTGTTAG-TTTGCCAAATCAAC------GA............................................................................................................................................................................................................................................................2611.00100100000000
........................................ATGACAATTTGTTAG-TTTGCC............................................................................................................................................................................................................................................................................2111.00100100000000
.....................................................................................................................TTTGCTCACATTGAAAACGACC...............................................................................................................................................................................................2211.00100100000000
.............................................................................AGATTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2311.00101000000000
........................................................................................................................................................................................................................................................................................................TGCTTCGACGCCTCAAGAAGGA............2211.00100100000000
...........CATTAGAAC-------T-AGCTTCGTGTGAT................................................................................................................................................................................................................................................................................................2311.00100000010000
..........................................................................................................................TCACATTGAAAACGACCCTAAC..........................................................................................................................................................................................2211.00100010000000
.....................................................................................................................................................................................................................................................................................................TCTTGCTTCGACGCCTCAAGAAGGAGGT.........2811.00100100000000
.......................................GATGACAATTTGTTAG-TTTGC.............................................................................................................................................................................................................................................................................2111.00100100000000
...........CATTAGAAC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2711.00100000100000
.....................................................................C------GAGATTCGTCTTATCCATG...........................................................................................................................................................................................................................................2011.00100100000000
............................................CAATTTGTTAG-TTTGCCAAAT........................................................................................................................................................................................................................................................................2111.00100100000000
..............................................................................................................................ATTGAAAACGACCCTAACATGAG.....................................................................................................................................................................................2311.00100000010000
........................................................TTTGCCAAATCAAC------GAGATTCGTCTT..................................................................................................................................................................................................................................................2611.00100010000000
............................................................................................................................................................................................................................................................................................TTCGTCCGTTCTTGCTTCGACGCCT.....................2511.00101000000000
.......................................................................................................................................................................................................................................................................................................................AGAAGGAGGTGGAAAAAC.1811.00100100000000
..........................................................TGCCAAATCAAC------GAGATTCGTCTTATC...............................................................................................................................................................................................................................................2711.00100100000000
.........................................TGACAATTTGTTAG-TTTGCCAAAT........................................................................................................................................................................................................................................................................2411.00100100000000
...........CATTAGAAC-------T-AGCTTCGTGTG..................................................................................................................................................................................................................................................................................................2111.00100000010000
....................................................................AC------GAGATTCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2511.00100100000000
........................................................TTTGCCAAATCAAC------GAGATTCGTCTTAT................................................................................................................................................................................................................................................2811.00100100000000
................GAAC-------T-AGCTTCGTGTGAT................................................................................................................................................................................................................................................................................................1811.00100000100000
................................................................................TTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2011.00100000010000
........................................................TTTGCCAAATCAAC------GAGATTCGT.....................................................................................................................................................................................................................................................2311.00101000000000
.............................................................................................................................CATTGAAAACGACCCTAACATGA......................................................................................................................................................................................2311.00100000010000
...................................................................AAC------GAGATTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2711.00100100000000
...............................................................................................................................TTGAAAACGACCCTAACATG.......................................................................................................................................................................................2011.00100000000001
............ATTAGAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2511.00100100000000
..............................................ATTTGTTAG-TTTGCCAAATCAAC------..............................................................................................................................................................................................................................................................2311.00100000010000
............ATTAGAAC-------T-AGCTTCGTGTG..................................................................................................................................................................................................................................................................................................2011.00100000010000
.............................................................................AGATTCGTCTTATCCATGTGGTCATGT..................................................................................................................................................................................................................................2711.00101000000000
...............................................................................ATTCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2011.00101000000000
...........CATTAGAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2011.00100000010000
...........................................................................................................................CACATTGAAAACGACCCTAACATGA......................................................................................................................................................................................2511.00101000000000
.....................................................................................................................................ACGACCCTAACATGA......................................................................................................................................................................................1511.00100000000001
....................................................................................................................ATTTGCTCACATTGAAAACGACCCT.............................................................................................................................................................................................2511.00101000000000
..........................................................TGCCAAATCAAC------GAGATTCGTCTT..................................................................................................................................................................................................................................................2411.00100000010000
............................................................................................................................ACATTGAAAACGACCCTAAC..........................................................................................................................................................................................2011.00100000100000
..........................................................................................................................................................................................................................................................................................GATTCGTCCGTTCTTGCTTCGACGCCT.....................2711.00101000000000
......................................................................................................................TTGCTCACATTGAAAACGACCCTAAC..........................................................................................................................................................................................2611.00101000000000
........................................................................................ATCCATGTGGTCATGTT----CTTACC.......................................................................................................................................................................................................................2311.00100100000000
............................................................................................................................ACATTGAAAACGACCCTAACATGA......................................................................................................................................................................................2411.00100100000000
.........CACATTAGAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2211.00100000010000
....................................................................................................ATGTT----CTTACCAATTTGCTCACATTG........................................................................................................................................................................................................2611.00101000000000
.....................................................................................................................................................................................................................................................................................................................CAAGAAGGAGGTGGAAAAACA2111.00100000010000
......................................................................................................................TTGCTCACATTGAAAACGACCC..............................................................................................................................................................................................2211.00100100000000
..................AC-------T-AGCTTCGTGTGATGACAATTTGT......................................................................................................................................................................................................................................................................................2611.00100000010000
...................................................................................................CATGTT----CTTACCAATTTGCTCAC............................................................................................................................................................................................................2311.00100000010000
......TGTCACATTAGAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2511.00100000010000
..............................................ATTTGTTAG-TTTGCCAAAT........................................................................................................................................................................................................................................................................1911.00101000000000
..................................................................CAAC------GAGATTCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2711.00100100000000
........................................................TTTGCCAAATCAAC------GAGATTCGTC....................................................................................................................................................................................................................................................2411.00100100000000
.............TTAGAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................1811.00100001000000
...............................CTTCGTGTGATGACAATTTGTTAG-TT................................................................................................................................................................................................................................................................................2611.00101000000000
........................................ATGACAATTTGTTAG-TTTGCCAAAT........................................................................................................................................................................................................................................................................2511.00101000000000
............ATTAGAAC-------T-AGCTTCGTGTGA.................................................................................................................................................................................................................................................................................................2111.00100000100000
...............................................................AATCAAC------GAGATTCGTCTTATCC..............................................................................................................................................................................................................................................2311.00100100000000
droEre2
ACTCTGTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCATGTT----CTT-CCAATTTGTTCACATTGAATACGCCCCTAACATGACCCTCCTATT-TTA-AG------------------TTA-TCCG--TTATTTCAAA------CT-A----TAT-G--CGCAGTAATTAG---------AAT--------TTGCGTTTGTTTC--TCCGTACAGGTGATTCGTCCGTTCTTACTTCGACGCCTCAAGAAGGAGGTTGAAAAACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................TTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................23113.00132108110
.....................................................................................................................................ACGCCCCTAACATGA......................................................................................................................................................................................15111.001100000011
........................................................TTTGCCAGATCAAG------GAGATG........................................................................................................................................................................................................................................................2015.0054000100
..............................................................................GATGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2115.0050004100
.........................................................TTGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................2215.0052201000
........................................................TTTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................2415.0050104000
..............................................................................GATGCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2214.0040201100
........................................................TTTGCCAGATCAAG------GAGATGCGTCTTATC...............................................................................................................................................................................................................................................2914.0040000004
.........................................................TTGCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................2513.0030001110
.........................................................TTGCCAGATCAAG------GAGATGC.......................................................................................................................................................................................................................................................2013.0030101010
..............................................................................GATGCGTCTTATCCATGTGGTCA.....................................................................................................................................................................................................................................2313.0031000200
..................AC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................1913.0031001010
........................................................TTTGCCAGATCAAG------GAGATGCGTCTTA.................................................................................................................................................................................................................................................2713.0033000000
..............................................................................................................................ATTGAATACGCCCCTAACATGA......................................................................................................................................................................................2213.0032000010
..........................................................................................................................TCACATTGAATACGCCCCTAACATGA......................................................................................................................................................................................2613.0031010001
.........................................................TTGCCAGATCAAG------GAGAT.........................................................................................................................................................................................................................................................1813.0030100020
...................................................................................................CATGTT----CTT-CCAATTTGTTCAC............................................................................................................................................................................................................2213.0030200100
..............................................................................................................................ATTGAATACGCCCCTAACATGAC.....................................................................................................................................................................................2313.0030300000
................AAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2112.0020001100
............ATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................1912.0021000010
............ATTAAAAC-------T-AGCTTCGTGTG..................................................................................................................................................................................................................................................................................................2012.0020002000
...........CATTAAAAC-------T-AGCTTCGTGTG..................................................................................................................................................................................................................................................................................................2112.0021000010
.............................................................................................................................CATTGAATACGCCCCTAACATGAC.....................................................................................................................................................................................2412.0020200000
........................................................TTTGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................2312.0021100000
.........CACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2212.0020000200
................................TTCGTGTGATGACAATTTGTTAG-TTTGCC............................................................................................................................................................................................................................................................................2912.0020200000
...............................................................................ATGCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2112.0020001010
.....................................................................................................................TTTGTTCACATTGAATACGCCCCTAAC..........................................................................................................................................................................................2712.0020200000
.........................................................TTGCCAGATCAAG------GAGATGCGTCTTAT................................................................................................................................................................................................................................................2712.0021100000
.............................................AATTTGTTAG-TTTGCCAGATCAAG------GAG...........................................................................................................................................................................................................................................................2711.0010001000
..........................................................................................................................TCACATTGAATACGCCCCT.............................................................................................................................................................................................1911.0010001000
............................................................................................................................ACATTGAATACGCCCCTAACATGA......................................................................................................................................................................................2411.0011000000
...........................................................................................................................CACATTGAATACGCCCCTAACATGA......................................................................................................................................................................................2511.0011000000
...........................................................................................................................................................................................................................................................................................................TTCGACGCCTCAAGAAGGA............1911.0010001000
..............................................ATTTGTTAG-TTTGCCAGATCAAG------GA............................................................................................................................................................................................................................................................2511.0010001000
....................................................................AG------GAGATGCGTCTTATCCATGTG.........................................................................................................................................................................................................................................2311.0010100000
..........................................................................................................................................................................................................................................................................................................CTTCGACGCCTCAAGAAGGA............2011.0010001000
...................................................................AAG------GAGATGCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2711.0010100000
.............................................................CAGATCAAG------GAGATGCGTCTTATCC..............................................................................................................................................................................................................................................2511.0010100000
...................................................................................................CATGTT----CTT-CCAATTTGTTCACATT.........................................................................................................................................................................................................2511.0010100000
....................................................................................................ATGTT----CTT-CCAATTTGTTCACATT.........................................................................................................................................................................................................2411.0010100000
.........................................................................................TCCATGTGGTCATGTT----CTT-CCAATTTGT................................................................................................................................................................................................................2811.0011000000
........................................................................................................................GTTCACATTGAATACGCCCCTAACATGA......................................................................................................................................................................................2811.0010100000
................................................................ATCAAG------GAGATGCGTCTTAT................................................................................................................................................................................................................................................2011.0010000100
..................................................GTTAG-TTTGCCAGATCAAG------..............................................................................................................................................................................................................................................................1911.0010001000
................................................................ATCAAG------GAGATGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2911.0010000100
...................................................................................GTCTTATCCATGTGGTCA.....................................................................................................................................................................................................................................1811.0010001000
.................................TCGTGTGATGACAATTTGTTAG-TTTGCC............................................................................................................................................................................................................................................................................2811.0010100000
...............................................................................ATGCGTCTTATCCATGTGGTCA.....................................................................................................................................................................................................................................2211.0010000100
..................................................................................CGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................1811.0010100000
.............................................AATTTGTTAG-TTTGCCAGATCA......................................................................................................................................................................................................................................................................2211.0010001000
.......................................GATGACAATTTGTTAG-TTTGCC............................................................................................................................................................................................................................................................................2211.0010100000
.........................................................TTGCCAGATCAAG------GAGATGCGTCT...................................................................................................................................................................................................................................................2411.0010001000
..........................................................TGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................2111.0010001000
..............................................................AGATCAAG------GAGATGCGTCTTA.................................................................................................................................................................................................................................................2111.0011000000
........................................................................................ATCCATGTGGTCATGTT----CTT-CC.......................................................................................................................................................................................................................2211.0010100000
...........................................................GCCAGATCAAG------GAGATGC.......................................................................................................................................................................................................................................................1811.0010000010
...........CATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2011.0011000000
....................................TGTGATGACAATTTGTTAG-TTTGCCAG..........................................................................................................................................................................................................................................................................2711.0010001000
....................................................................................................ATGTT----CTT-CCAATTTGTTC..............................................................................................................................................................................................................1911.0010001000
...................................................................AAG------GAGATGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2611.0011000000
..................AC-------T-AGCTTCGTGTGATGACAATTTGT......................................................................................................................................................................................................................................................................................2611.0010010000
...................................................................AAG------GAGATGCGTCTTATCC..............................................................................................................................................................................................................................................1911.0010100000
.............................................................................AGATGCGTCTTATCCATGTGGTCATGT..................................................................................................................................................................................................................................2711.0010000100
................................................TTGTTAG-TTTGCCAGATCAA.....................................................................................................................................................................................................................................................................2011.0010001000
...................C-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................1911.0010001000
...........CATTAAAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2611.0010000100
.......................................GATGACAATTTGTTAG-TTTGCCAGAT........................................................................................................................................................................................................................................................................2611.0011000000
........................................................TTTGCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................2611.0011000000
..........................................................................................................................TCACATTGAATACGCCCCTAACATGAC.....................................................................................................................................................................................2711.0010100000
............................................................................GAGATGCGTCTTATCCATGTGGTCA.....................................................................................................................................................................................................................................2511.0010100000
..........................................................TGCCAGATCAAG------GAGATGCGTCT...................................................................................................................................................................................................................................................2311.0011000000
..................................................................CAAG------GAGATGCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2811.0010100000
................................TTCGTGTGATGACAATTTGTTAG-T.................................................................................................................................................................................................................................................................................2411.0010100000
........................................................TTTGCCAGATCAAG------GAGATGC.......................................................................................................................................................................................................................................................2111.0010001000
..........ACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2111.0010100000
...................................................................AAG------GAGATGCGTCTTATCCATGTG.........................................................................................................................................................................................................................................2411.0010001000
........................................................................................................................GTTCACATTGAATACGCCCCTAACATGAC.....................................................................................................................................................................................2911.0010100000
................................................TTGTTAG-TTTGCCAGATC.......................................................................................................................................................................................................................................................................1811.0010001000
............................................................................................................................................................................................................................................................................................TTCGTCCGTTCTTACTTCGACG........................2211.0011000000
..........................................................................................................................TCACATTGAATACGCCCCTAACATG.......................................................................................................................................................................................2511.0011000000
.................................................................TCAAG------GAGATGCGTCTTATC...............................................................................................................................................................................................................................................2011.0010100000
......................................................G-TTTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................2511.0010001000
.............................................................................................................CTT-CCAATTTGTTCACATTGAATACG..................................................................................................................................................................................................2611.0010100000
........................................ATGACAATTTGTTAG-TTTGC.............................................................................................................................................................................................................................................................................2011.0010001000
........................................................................................................................GTTCACATTGAATACGCCCCT.............................................................................................................................................................................................2111.0010100000
................................................TTGTTAG-TTTGCCAGATCAAG------GAGA..........................................................................................................................................................................................................................................................2511.0010000100
..................................................GTTAG-TTTGCCAGATCAAG------GAGA..........................................................................................................................................................................................................................................................2311.0010000010
..................................................GTTAG-TTTGCCAGATCAAG------GAG...........................................................................................................................................................................................................................................................2211.0010000100
........................................................................................................................GTTCACATTGAATACGCCCCTAACATG.......................................................................................................................................................................................2711.0011000000
.......................................................................................TATCCATGTGGTCATGTT----CTT-CC.......................................................................................................................................................................................................................2311.0010100000
...................................................................................................CATGTT----CTT-CCAATTTGTT...............................................................................................................................................................................................................1911.0010000100
................AAAC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2211.0010000010
........................................................TTTGCCAGATCAAG------GAGAT.........................................................................................................................................................................................................................................................1911.0011000000
...............................................TTTGTTAG-TTTGCCAGATC.......................................................................................................................................................................................................................................................................1911.0010100000
.................................TCGTGTGATGACAATTTGTTAG-T.................................................................................................................................................................................................................................................................................2311.0010100000
............................................................................................ATGTGGTCATGTT----CTT-CCAATTTGTTC..............................................................................................................................................................................................................2711.0010100000
.........................................................TTGCCAGATCAAG------GAGATGCGTCTTA.................................................................................................................................................................................................................................................2611.0010001000
..............................................................................................................TT-CCAATTTGTTCACATTGAATACGCCC...............................................................................................................................................................................................2811.0010100000
......................................................................................TTATCCATGTGGTCATGTT----CTT-CC.......................................................................................................................................................................................................................2411.0010001000
.....................................................AG-TTTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................2611.0010000100
...................................GTGTGATGACAATTTGTTAG-TTTGCC............................................................................................................................................................................................................................................................................2611.0010100000
..............................................................................GATGCGTCTTATCCATGT..........................................................................................................................................................................................................................................1820.5010100000
droSec2
ACTCTGTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCTAAGTT----CTTACCAATTTGTTCACATTGAAAACGCCCCTAACATGACCCTCTTA--TTTA-AG------------------TTA-TTCG--TATTTTCAAA------CT-A----AAT-G--CGAAGTAATTAG---------AAT----T---TTGCTTTTGTTTC--TCCGTAAAGGTGATTCGTCCGTTCCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................TTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................23113.001301120
.........................................................TTGCCAGATCAAG------GAGATGCGTCTTAT................................................................................................................................................................................................................................................2714.0040220
.........................................................TTGCCAGATCAAG------GAGAT.........................................................................................................................................................................................................................................................1814.0040040
.............................AGCTTCGTGTGATGACAATTTGTTAG-TT................................................................................................................................................................................................................................................................................2812.0022000
.........................................................TTGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................2212.0021001
........................................................TTTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................2412.0021010
.........................................................TTGCCAGATCAAG------GAGATGC.......................................................................................................................................................................................................................................................2012.0020020
................AAAC-------T-AGCTTCGTGTGAT................................................................................................................................................................................................................................................................................................1812.0020020
.........................................................TTGCCAGATCAAG------GAGATGCGTCT...................................................................................................................................................................................................................................................2412.0021100
.........................................................TTGCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................2512.0020020
............ATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................1911.0010010
...........................T-AGCTTCGTGTGATGACAATTTGT......................................................................................................................................................................................................................................................................................2411.0010010
........................................................TTTGCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................2611.0010010
................AAAC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2211.0010010
...........................T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................1811.0010010
.........CACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2211.0010010
........................................................TTTGCCAGATCAAG------GAGATG........................................................................................................................................................................................................................................................2011.0010010
...........................................................GCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................2311.0010100
.................................................................................................................................GAAAACGCCCCTAACATGA......................................................................................................................................................................................1911.0011000
................................................TTGTTAG-TTTGCCAGATCAAG------GAGA..........................................................................................................................................................................................................................................................2511.0010010
................................................................ATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................1811.0010010
................................................................ATCAAG------GAGATGCGTCTTATC...............................................................................................................................................................................................................................................2111.0010010
....................................................................AG------GAGATGCGTCTTATCCATGTGGC.......................................................................................................................................................................................................................................2511.0010010
...............................................................GATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................1911.0010010
........................................................TTTGCCAGATCAAG------GAGATGCGTCTTA.................................................................................................................................................................................................................................................2711.0010100
.........................................................TTGCCAGATCAAG------GAGATGCGTCTTATC...............................................................................................................................................................................................................................................2811.0010010
.......................................................................................................................................................................................................................................................................................................CTACTTCGACGCCTTAAAAAGGA............2311.0010010
..............................GCTTCGTGTGATGACAATTTGTTAG-TT................................................................................................................................................................................................................................................................................2711.0011000
..............................................................................GATGCGTCTTATCCATGTGGCT......................................................................................................................................................................................................................................2211.0010010
.....................................GTGATGACAATTTGTTAG-T.................................................................................................................................................................................................................................................................................1911.0010010
....................................................TAG-TTTGCCAGATCAAG------G.............................................................................................................................................................................................................................................................1811.0010010
............ATTAAAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2511.0010010
..................AC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2011.0010010
............................................................................GAGATGCGTCTTATCCATGTGGCTA.....................................................................................................................................................................................................................................2511.0010010
..........................................................TGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................2111.0010010
................................................TTGTTAG-TTTGCCAGATCAAG------GA............................................................................................................................................................................................................................................................2311.0010010
.................AAC-------T-AGCTTCGTGTGATGACAATT.........................................................................................................................................................................................................................................................................................2411.0010010
...................................................................................................................AATTTGTTCACATTGAAAACGCCCCT.............................................................................................................................................................................................2611.0010010
..............................................................................GATGCGTCTTATCCATGTGGCTAAG...................................................................................................................................................................................................................................2511.0010010
...............................CTTCGTGTGATGACAATTTG.......................................................................................................................................................................................................................................................................................2011.0010010
...CTGTGTCACATTAAAAC-------T-AGCTTCGTG....................................................................................................................................................................................................................................................................................................2711.0011000
...............................................................................ATGCGTCTTATCCATGTGGCTAAGT..................................................................................................................................................................................................................................2511.0010100
droSim2
ACTCTGTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAA------GAGATGCGTCTTATCCATGTGGCTAAGTT----CTTACCAATTTATTCACATTGAAAACGCCCCTAACATGACCCTCTTA--TTTA-AG------------------TTA-TCCG--TATTTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------AAT----T---TGGCTTTTGTTTT--TCCGTACAGGTGATTCGTCCGTTTCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................TTGCCAGATCAAA------GAGATG........................................................................................................................................................................................................................................................19128.0028202500000000100000
.........................................................TTGCCAGATCAAA------GAGATGCGTC....................................................................................................................................................................................................................................................2318.00810000000000700000
.........................................................TTGCCAGATCAAA------GAGAT.........................................................................................................................................................................................................................................................1817.00701600000000000000
..............................................................................................................................ATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................2214.00400010003000000000
.........................................................TTGCCAGATCAAA------GAGATGCGT.....................................................................................................................................................................................................................................................2213.00300000000000300000
...........................................................GCCAGATCAAA------GAGA..........................................................................................................................................................................................................................................................1513.00300000000003000000
.............................................................................AGATGCGTCTTATCCATGTGGCT......................................................................................................................................................................................................................................2312.00200200000000000000
.........................................................TTGCCAGATCAAA------GAGATGC.......................................................................................................................................................................................................................................................2012.00201010000000000000
...........................................................................................................................................................................................................................................................................................ATTCGTCCGTTTCTACTTCGAC.........................2212.00200200000000000000
.........................................................TTGCCAGATCAAA------GAGATGCGTCTTAT................................................................................................................................................................................................................................................2712.00200000000000200000
.........................................................TTGCCAGATCAAA------GAGATGCG......................................................................................................................................................................................................................................................2112.00200000200000000000
..........................................................TGCCAGATCAAA------GAGATGCGTCC...................................................................................................................................................................................................................................................2311.00110000000000000000
...........................................................GCCAGATCAAA------GAGATGCG......................................................................................................................................................................................................................................................1911.00100000000001000000
...........CATTAAAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2611.00100010000000000000
.................................TCGTGTGATGACAATTTGT......................................................................................................................................................................................................................................................................................1911.00100000000001000000
..........................................................................................................................TCACATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................2611.00100000001000000000
...........................T-AGCTTCGTGTGATGACAATTTGT......................................................................................................................................................................................................................................................................................2411.00100010000000000000
.......................................GATGACAATTTGTTAG-TTTGCCAGATC.......................................................................................................................................................................................................................................................................2711.00100010000000000000
..................................................................................CGTCTTATCCATGTGGCTAAGT..................................................................................................................................................................................................................................2211.00100000000000100000
.......GTCACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.................................................................................................................................................................................................................................................................................................................GCCTTAAAAAGGAGGT.........1611.00100000000001000000
...CTGTGTCACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.............................................................................................................................CATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................2311.00100010000000000000
...........................................................................................CATGTGGCTAAGTT----CTTAC........................................................................................................................................................................................................................1911.00100000000000100000
................AAAC-------T-AGCTTCGTGTGATGA..............................................................................................................................................................................................................................................................................................2011.00100010000000000000
...........................T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................1811.00100100000000000000
......................................TGATGACAATTTGTTAG-TTTGCCAGA.........................................................................................................................................................................................................................................................................2611.00100000000010000000
.............................................................................................................................................AACATGACCCTCTTA--TTTA-AG------------------TT.................................................................................................................................................2311.00100000000000100000
...........................................................GCCAGATCAAA------GAGAT.........................................................................................................................................................................................................................................................1611.00100000000001000000
..............TAAAAC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2411.00100010000000000000
..............................................ATTTGTTAG-TTTGCCAGA.........................................................................................................................................................................................................................................................................1811.00100010000000000000
..............................................................................................................................ATTGAAAACGCCCCTAACATGAC.....................................................................................................................................................................................2311.00100000100000000000
..................................................................................................................................AAAACGCCCCTAACATGA......................................................................................................................................................................................1811.00100000001000000000
........................................................................................................................ATTCACATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................2811.00100010000000000000
...........................................................GCCAGATCAAA------GAGATG........................................................................................................................................................................................................................................................1711.00100000000001000000
............................................................................................ATGTGGCTAAGTT----CTTACC.......................................................................................................................................................................................................................1911.00100100000000000000
...................................................................................................................................................................................................................................................................................................................CTTAAAAAGGAGGTGGAA.....1811.00100010000000000000
...............................................TTTGTTAG-TTTGCCAGATCAAA------GAGAT.........................................................................................................................................................................................................................................................2711.00100010000000000000
..................AC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2011.00100100000000000000
...........CATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...........CATTAAAAC-------T-AGCTTCGT.....................................................................................................................................................................................................................................................................................................1811.00101000000000000000
....................................................................AA------GAGATGCGTCTTATCCATGTGGC.......................................................................................................................................................................................................................................2511.00100010000000000000
................................................................................................................................TGAAAACGCCCCTAACATGA......................................................................................................................................................................................2011.00100000001000000000
..........................................................................................................................................................................................................................................................................................GATTCGTCCGTTTCTACTTCGAC.........................2311.00100100000000000000
.........CACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2211.00100010000000000000
........................................................TTTGCCAGATCAAA------GAGATGCGTCTTA.................................................................................................................................................................................................................................................2711.00100100000000000000
.....................................................AG-TTTGCCAGATCAAA------GAGAT.........................................................................................................................................................................................................................................................2111.00100000000001000000
......TGTCACATTAAAAC-------T-AGCTTCGT.....................................................................................................................................................................................................................................................................................................2311.00100100000000000000
........................................................TTTGCCAGATCAAA------GAGATG........................................................................................................................................................................................................................................................2011.00110000000000000000
..................................................................CAAA------GAGATGCGTCTTATCCATGTGGCG......................................................................................................................................................................................................................................2811.00101000000000000000
..................AC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................1911.00100100000000000000
..................................................................CAAA------GAGATGCGTCTTATCCATGTGG........................................................................................................................................................................................................................................2611.00100010000000000000
........TCACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.................AAC-------T-AGCTTCGTGTA..................................................................................................................................................................................................................................................................................................1560.17100000010000000000
dm3
ACTCTGTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCTGAGTT----CTTACCAATTTATTCACATTGAAAACGCCCCTAACATGACCCTCTTA--TTTA-AG------------------TTA-TCCT--TATTTTCAAA------AT-A----AAT-G--CGCAGTAATTAG---------AAT----T---TGGCTTTTGTTTC--TCCGTACAGGTGATTCGTCCGTTCCTACTTCGACGCCTCAAAAAGGAGGTGGAAAAACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................ATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................221426.0042600000000000000000000001000000000000001000000010000000000000000000000000000000000000000000000000010000000000000000100000000000000000000300300000000000000000000000000000000000000000000000000000000000000000000000000000320410922904202042002000010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010013
.........................................................TTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................231223.00223000000000000000000000009000000000000000200110100021000000000000000000000000000000000000010000010100000000000000000000000000000000000000100000100540000000000000000000000000000000000000000000020000000000000030010000081210040201080001000027000000000000000000000000000000100000000000000000006000072449000300322190100000000070010010023000
..........................................................................................................................TCACATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................261153.0015300000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000004010000000000300030000000000000000000000105100000000000010000000000000000001000000000000000001000000000000000000000000000300342218119337000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ACATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................241138.0013800000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000010000000000101000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000248124111135100100000000000000000000000000000000000000000000000000000000000000100000020000000000000000000000000000
.........................................................TTGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................221136.0013600000000000000000010001400000000000000000000000000020000000000000000000000000000000000001000000000000000000000000000000000000000000000001000000001000200000000000000000000000000000000000000002000000000000410000000001020200110000200020000000000000000000000000000000010000000000000000000000010040513290001002647000000000000001010003000
.........................................................TTGCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................251118.0011800000000000000000000000100000000000000110000020000000100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000005000200002000000000000000000000000200000000000000000300000100000500001300110300021001000000000000000000100000000000000000000000000000000000001001002270000004908000000000023000001001000
...........................................................................................................................CACATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................251114.0011400000000000000000000001000000000000000000000000000000000000100000000000000000000000000100000001000000000000000010000000000000000000000112100000000000000000000000000000000000100000000000000000000000000000000000000000000341221110024000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
.........................................................TTGCCAGATCAAG------GAGATGCGTCT...................................................................................................................................................................................................................................................24196.009600000000000000000000000100000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000001000001000000510000000002910030200030000000000000000000000100000000000002000000000000000000000002001023240000003325000000000000000100004000
..........................................................TGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................22192.009200000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000200001000000300000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000010102000077000
.........................................................TTGCCAGATCAAG------GAGATGC.......................................................................................................................................................................................................................................................20181.008100000000000000000000000100000000000000000000020000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000201002010110000000000000000000000000000000000001100000000000000106002500006600010001010000000000000000000000000000000000000000000000000000000000001000002260001001813000000000002001100000000
.........................................................TTGCCAGATCAAG------GAGATG........................................................................................................................................................................................................................................................19180.008000000000000000000000000200000000000000010000010000000000011100000000000000000000000000000000000000010000000000000000000000000000000000000000100002000000000000000000000000000000000000000000000000000000000000000000005020040022060000000000000000000000000000000000000000000000000000000000000000018490000002303000000000000000000000000
.........................................................TTGCCAGATCAAG------GAGATGCGTCTTA.................................................................................................................................................................................................................................................26175.007500000000000000000000000100000000000000000200010000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000510000000001000040300010000000010000000000000000000000000000000000000000000000000000000001040000003725000000000000000020000000
.................................................................................................................................GAAAACGCCCCTAACATGA......................................................................................................................................................................................19174.00740000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011827013024000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
...............................................................................................................................TTGAAAACGCCCCTAACATGA......................................................................................................................................................................................21172.0072000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000003000000100000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000919014126100000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TGAAAACGCCCCTAACATGA......................................................................................................................................................................................20172.0072000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000010000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000210807030000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................ATTCACATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................28165.00650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021701406025000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................TTGCCAGATCAAG------GAGATGCGTCTTAT................................................................................................................................................................................................................................................27141.004100000000000000000000000300000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000001000000300000100000000002000000001020000000000000000000000000000000000000000000000000000000000000000001110000001016000000000003010000001000
.............................................................................................................................CATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................23138.00380000000000000000000000000000000000000000010001000000000000000000000000000000000000000000100000000000000000010001000000000000000000000000210000000000000000000000000000010000000000000000000000000000000000000000000000000007080203100000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000006
.........................................................TTGCCAGATCAAG------GAGATGCG......................................................................................................................................................................................................................................................21134.003400000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010002010000000000000000000000000000000000000000000000000000000000000000025050000001203000000000000000000000000
........................................................TTTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................24133.00330000000000000000000000000000000000000001011000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120002000100000000000000000000000010000000000000000000000001000000000000000001101000000702000000000100000000002000
.........................................................TTGCCAGATCAAG------GAGAT.........................................................................................................................................................................................................................................................18133.00330000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000100000000000000000000000000000000000000000000800000010000100000000000000000000000000000000000000000000000000000010000200021110000000402000000000000000000000000
..............................................................................................................................ATTGAAAACGCCCCTAACATG.......................................................................................................................................................................................21131.003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080204015000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................TTTGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................23128.00280000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000030000010000000000221000021000000000000000000000000000000000000000000000000000000000000000000000220000000504000000000000000010000000
.....................................................AG-TTTGCCAGATCAAG------GAG...........................................................................................................................................................................................................................................................19125.00250000000000000000000000000000000000000001000001000001000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000201000000010006000200000000000000000000000000000000000000000000000000000000000000000000102000000200010000001000000000000000
........................................................TTTGCCAGATCAAG------GAGATGCGTCT...................................................................................................................................................................................................................................................25125.00250000000000000000000000000000000000000000001001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100010000000000000000000000000000000000000000003000000000001000000000000002000003000000000000000000000010000000000000000000000000000000100000100000100000000301000000000000000010001000
.....................................................AG-TTTGCCAGATCAAG------GAGAT.........................................................................................................................................................................................................................................................21122.00220000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000002002000000001000000000011002000201000000000000000000000000000000000000000000000000000001000000000000201000000300000000000000000000000000
........................................................TTTGCCAGATCAAG------GAGAT.........................................................................................................................................................................................................................................................19121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000020000000000100000000000000000000000000000000000000000000000000000000000001100000000000000000002122000000501000100000000000000001000
.........................................................TTGCCAGATCAAG------GAGATGCGTCTTATC...............................................................................................................................................................................................................................................28120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000090000001000000000000001000202000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000011000000
................AAAC-------T-AGCTTCGTGTGATG...............................................................................................................................................................................................................................................................................................19119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000007800000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
........................................................TTTGCCAGATCAAG------GAGATGC.......................................................................................................................................................................................................................................................21117.00170000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000002000000000000000000000300000000001000000000000000000000000000000000000000000000000000000000000100000022000000210000000000000000000000000
........................................................TTTGCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................26117.00170000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000001000000000010000000000000000001000000000000000000000000000000000000000000000000000000000010000000412010000001000000100000000
.....................................................AG-TTTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................26117.00170000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000000000000000000000000000000000000030000000000000001000100000000000000000000000000000000000000000000000000000000000000000100000010000210000100000000000000002000
.....................................................AG-TTTGCCAGATCAAG------GAGATGCGTCT...................................................................................................................................................................................................................................................27115.00150000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000002010000101000100020000000000000000
........................................................TTTGCCAGATCAAG------GAGATGCGTCTTA.................................................................................................................................................................................................................................................27115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000001000000000303000000000000001211000000
..............................................................................................................................ATTGAAAACGCCCCTAACATGAC.....................................................................................................................................................................................23114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000020001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007
..........................................................TGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................21114.00140000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000111000000000000000000000000000000000000000000000000000000000000000000000010000200000000000000000000000000000005000
........................................................TTTGCCAGATCAAG------GAGATG........................................................................................................................................................................................................................................................20114.00140000000000000000000000010000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000400000000000000000000000000
..........................................................TGCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................24113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000001004000
.........................................................................................................................TTCACATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................27113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004020214000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AAAACGCCCCTAACATGA......................................................................................................................................................................................18112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000010000010000001000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................G-TTTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................25112.00120000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000020000000000000000000000000100000000000020000000000000000000000000000000100000000000000000000100000100100000000000001000
..................................................GTTAG-TTTGCCAGATCAAG------GA............................................................................................................................................................................................................................................................21112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005010204000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AG-TTTGCCAGATCAAG------GAGA..........................................................................................................................................................................................................................................................20112.00120000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101002000100000000000000000000000000000000000000000000000000000000000000000000012000000100000000000000000000000000
......................................................G-TTTGCCAGATCAAG------GAGATGCGTCT...................................................................................................................................................................................................................................................26111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000001000010010000000
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...............AAAAC-------T-AGCTTCGTGTGATGACAATTTG.......................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................TTCGTGTGATGACAATTTGTTAG-..................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................CAGATCAAG------GAGATGCGTCTTATCCAT............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CCAGATCAAG------GAGATGCG......................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................GATGACAATTTGTTAG-TTT...............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TTGCCAGATCAAG------GAGA..........................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................ATTGAAAACGCCCCTAACA.........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CATTGAAAACGCCCCTAACAT........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TCAAG------GAGATGCGTCTTATCCA.............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CATTAAAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................GTT----CTTACCAATTTATTCAC............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGTGTCACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................AGATGCGTCTTATCCATGTGG........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................AG-TTTGCCAGATCAAG------GAGATG........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
droEug1
ACTCTGTGTCACATTTAAAT---G---T-AGCCTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGCTCAGGTT----CTTATCAGGCTGCTCACATTGAAAACGCCCCTAACACAATTGCATTTAT-AGC-C-----------------TATT-CTTTA--TAATTTCAAA------TTTA----AAT-G--CGCAGTAATCAG---------CAT----A---TTGCTTTTGTTTT--TCCGTACAGGTGATTCGTCCGTTCCTACTTCGACGTCTCAAGAAGGAGGTTGAAAAACASizeHit CountTotal NormTotal
No Reads
droBia1
ACTCTGTGTCACATTAAAAC---A---T-AGCCTCGTGTGACGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCAAGAT----CTAACC-AGTTGCTCACATTGAAAACGCCCCTGACACGACCATCTTTAC-AAA-A-----------------AGTT-CTCCG--TAATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTCCTCTTATTTT--TCCATACAGGTAATTCGTCCGTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAACASizeHit CountTotal NormTotal
No Reads
droTak1
ACTCTGTGTCACATTAAAAC---A---T-AGCATCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCCAAGAA----CTAACCAAGTTGCTCACATTGAAAACGCCCCTAACACGACAGCCCTTTT-AAA-A-----------------TATT-TCCCG--TAGTTACAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCTTTTGTTTT--TCCCTACAGGTGATTCGTCCGTTCCTACTTCGTCGCCTCAAGAAGGAGGTGGAAAAACASizeHit CountTotal NormTotal
No Reads
droEle1
ACTCTGTGTCACTTTGATAT---T---T-AGCCTCATGTGATGACAATTTGTCAG-TTTGCCAGATAAAG------GAGATGCGTCTTATCCATGTGGTCAAGTT----CACACCATGTTGCTCACATTGAAAACGCCCCTAACACCATATT---TTT-ATA-AC-----------------AT-ATTCCA--TAATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCCCTTATTCT--TCCGTGCAGGTGATTCGTCCGTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAACASizeHit CountTotal NormTotal
No Reads
droRho1
ACTCTGTGTCACTTTGATAT---T---T-AGCCTCAAGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCAAATT----TTAACCAAGTTGCTCACATTGAAAACGCCCCTAACACCACCATATTAAA-CAA-A-----------------TATT-TTCCG--TAATTTCAAA------CT-A----AAT-G--CGCAGTAAATAG---------CAT----A---TTGTCTTTGTTTT--TACGTGCAGGTGATTCGTCCTTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAGCASizeHit CountTotal NormTotal
No Reads
droFic1
ACTCTGTGTCACATTAAAT----A---T-ATCCTCGTGTGATGACAATTTGTTAG-TTTGCCAGATTAAG------GGGGTGCGTCTTATCCATGTGGTCAAGTT----TCCATCAAGCTGTTCACATTGAAAACGCACCTGACAGGATTAT--TAG--TAAAA------------------ATT-TCCCT--TCATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCACTTGTTTC--TCCGTGCAGGTGATTCGTCCGTTCCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACASizeHit CountTotal NormTotal
No Reads
droKik1
ACTCTGTGTCACATTGATTT-------TACACCTCGTGTGATGACAATTTGTTAG-TTTGCCAAAGGAAA------GAGTGGCGTCTTATCCATGTTCTCAATTTTAACCC--TCAAGTTGATCACATTGAAAATGCTTCTTACACCACCTTT--A--CTTA-TGAT--------------TCATA-ACCT--TAATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCAATTGTTTA--TCCCTGCAGGTGATTCGTCCCTTCCTACTCCGACGCCTCAAGAAGGAGGTGGAGAAGCASizeHit CountTotal NormTotal
No Reads
droAna3
AGCCTGTGTCACAT---------A---T-TGCCTCGTGTGATGACACTGTTTTAG-TTTGCCAGATCGAA------GAGGTGCGTCGTGTCCGTGTGGTCTTATC----CCTAGCCAATAGATTGCATAGAATTAGCATCAAACATGTGGTTTACA--TTCA-AG------------------TTT-TCAC--AA---------------------------------------------------------------CCTCTTCTTTC--TCCTTACAGGTGATTCGTCCCTTCCTGCTGCGTCGCCTCAAGAAGGAGGTGGAGAAACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................AATTAGCATCAAACATGTG.....................................................................................................................................................................................1912.002000002
.........................................................TTGCCAGATCGAA------GAGGTGC.......................................................................................................................................................................................................................................................2011.001010000
......................................................................................................................................................................................................................................................................................AGGTGATTCGTCCCTTCCTGCTGCGT..........................2611.001000001
.........................................................TTGCCAGATCGAA------GAGGTGCGTC....................................................................................................................................................................................................................................................2311.001010000
...............................................................................................................................................................................................................................................................................................GTCCCTTCCTGCTGCGTCGC.......................2011.001100000
...............................................................................................................................................................................................................................................................................................GTCCCTTCCTGCTGCGTCGCCTCAA..................2511.001100000
..........................................................TGCCAGATCGAA------GAGGTGCGTCGTGTCC..............................................................................................................................................................................................................................................2811.001100000
....................................................TAG-TTTGCCAGATCGAA------GAGGT.........................................................................................................................................................................................................................................................2211.001001000
droBip1
AGCCTGTGTCACACT------------C-TGCCCCAAGTGATGACACTGTTTTAG-TTTGCCAGATCGAT------GAGGTGCGTC-TATCCATGTGGTCTTGCC----CTAGCC-TATAGATTACGTTGAATTAGCATCAGACATTACCACA--A------------------------------------------------------------------------------------------------------CCTCTCCTTTA--TCCTTGCAGGTGATTCGTCCTTTCCTGCTGCGTCGCCTCAAGAAGGAGGTGGAGAAACASizeHit CountTotal NormTotal
No Reads
dp5
ACTCTGTGTCACATTGAAAC---A---C-AGCCTCATGTGATGACAATTTGTTAG-TTTGCTAGATCAAGTGG-GAACGGGGCGTCTTATCCATGTGGTTGGTCT----ATGACCAAGCTAATCACATTGAAAACGCTCCTTACACGACCTCACCGC---TA-TGATAGCAGCACTAAGCA--CTA-TCCTCCTAGTTTTAAG------CT-T----AATCT--CGCTGTAATTGA---------CAC----TTTTTCGTCCTTGTGTG--TCCTTGCAGGTGATTCGGCCGTTCCTGCTGCGACGCCTCAAGAAGGAGGTGGAGAAGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................AACGGGGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................24221.5043020112316000
.........................................................TTGCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................23217.503502060211005
.........................................................TTGCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................22216.003202050502000
..............................................................................................................................ATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................22116.001601510000000
.........................................................TTGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................24213.002601340205002
...........................................................................AACGGGGCGTCTTATCCATGTGG........................................................................................................................................................................................................................................2329.501901310005000
.............................................................................................................................CATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2319.0090810000000
.........................................................TTGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2528.50170941000003
.........................................................TTGCTAGATCAAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................2825.00100620001001
..........................................................TGCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................2225.00100900001000
..........................................................TGCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................2124.5090800000001
.........................................................TTGCTAGATCAAGTGG-GA..............................................................................................................................................................................................................................................................1824.5090600300000
................................................................................................................................TGAAAACGCTCCTTACACGA......................................................................................................................................................................................2014.0040400000000
.........................................................TTGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................1923.5070420100000
..........................................................................................................................TCACATTGAAAACGCTCCTTAC..........................................................................................................................................................................................2213.0030200001000
........................................................TTTGCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................2323.0060600000000
.........................................................TTGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2122.5050400100000
.........................................................TTGCTAGATCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................2722.5050400001000
.........................................................................................................................ATCACATTGAAAACGCTCCTTACACGAC.....................................................................................................................................................................................2812.0020000000002
............................................................................ACGGGGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2322.0040400000000
...................................................................................GTCTTATCCATGTGGTTGGTCT----ATGAC........................................................................................................................................................................................................................2712.0020100100000
..........................................................TGCTAGATCAAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................2722.0040200002000
..................................................................................................................................AAAACGCTCCTTACACGA......................................................................................................................................................................................1812.0020200000000
...........................................................................AACGGGGCGTCTTATCCATGTG.........................................................................................................................................................................................................................................2222.0040100012000
...........................................................................AACGGGGCGTCTTATCCATGTGGTT......................................................................................................................................................................................................................................2522.0040101002000
..........................................................TGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2421.5030200100000
.........CACATTGAAAC---A---C-AGCCTCATGT...................................................................................................................................................................................................................................................................................................2321.5030020100000
........................................................TTTGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2521.5030210000000
..........................................................TGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2321.5030300000000
.........................................................TTGCTAGATCAAGTGG-GAAC............................................................................................................................................................................................................................................................2021.5030210000000
........................................................TTTGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2621.5030210000000
............................................................................................................................ACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2411.0010100000000
..........................................................................................................................TCACATTGAAAACGCTCCTTACA.........................................................................................................................................................................................2311.0010000100000
.......................................................................................................................................................................................................................................................................................................................AGAAGGAGGTGGAGAAGCA1911.0010100000000
............................................................................................................................................................................................................................................................................................TTCGGCCGTTCCTGCTGCGACG........................2211.0010100000000
.........................................................................................................................ATCACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2711.0010010000000
................................................................ATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................1821.0020110000000
..........................................................................................................................................................................................................................................................................GTG--TCCTTGCAGGTGATTCGGCCGTTCCT.................................2911.0010000001000
.....................................................AG-TTTGCTAGATCAAGTGG-................................................................................................................................................................................................................................................................1921.0020200000000
..............................................................................................................................................................................................................................................................................................CGGCCGTTCCTGCTGCGAC.........................1911.0010000100000
..........................................................................................................................TCACATTGAAAACGCTCCTTACACGAC.....................................................................................................................................................................................2711.0010010000000
........................................................TTTGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2221.0020200000000
.............................................................................................................................CATTGAAAACGCTCCTTACA.........................................................................................................................................................................................2011.0010100000000
...........................................................................AACGGGGCGTCTTATCCATG...........................................................................................................................................................................................................................................2021.0020200000000
...........................................................................................................................CACATTGAAAACGCTCCTTACA.........................................................................................................................................................................................2211.0010100000000
..................AC---A---C-AGCCTCATGTGATGACA............................................................................................................................................................................................................................................................................................2121.0020000000020
................................................................................................................ACCAAGCTAATCACATTGAAAACGCTCCT.............................................................................................................................................................................................2911.0010100000000
.........................................................TTGCTAGATCAAGTGG-GAACGGGGCG......................................................................................................................................................................................................................................................2621.0020200000000
...............................................................................................................................TTGAAAACGCTCCTTACACG.......................................................................................................................................................................................2011.0010100000000
........................................................TTTGCTAGATCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................2821.0020200000000
...........CATTGAAAC---A---C-AGCCTCATGT...................................................................................................................................................................................................................................................................................................2121.0020110000000
......................................................................................................................CTAATCACATTGAAAACGCTCCT.............................................................................................................................................................................................2311.0010100000000
..............................................................................................................................ATTGAAAACGCTCCTTACA.........................................................................................................................................................................................1911.0010000100000
...........................................................................................................................................CTTACACGACCTCACCGC---TA-.......................................................................................................................................................................2011.0010000100000
..........................................................................................................................TCACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2611.0010100000000
........................................................TTTGCTAGATCAAGTGG-GAAC............................................................................................................................................................................................................................................................2121.0020200000000
..........ACATTGAAAC---A---C-AGCCTCATGT...................................................................................................................................................................................................................................................................................................2220.5010100000000
................................................................................GGCGTCTTATCCATGTGGTTGGTCT----.............................................................................................................................................................................................................................2520.5010100000000
..........................................................TGCTAGATCAAGTGG-GAAC............................................................................................................................................................................................................................................................1920.5010000001000
............................................................CTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2120.5010010000000
............................................................................ACGGGGCGTCTTATCCATGTGG........................................................................................................................................................................................................................................2220.5010100000000
..................................................................................CGTCTTATCCATGTGGTTGG....................................................................................................................................................................................................................................2020.5010000100000
..........................................................TGCTAGATCAAGTGG-GAACGGGGA.......................................................................................................................................................................................................................................................2420.5010000100000
.........................................................TTGCTAGATCAAGTGG-GAACGGGGA.......................................................................................................................................................................................................................................................2520.5010000000001
.....................................................................GTGG-GAACGGGGCGTCTTATCC..............................................................................................................................................................................................................................................2220.5010010000000
.....................................................AG-TTTGCTAGATCAAGTG..................................................................................................................................................................................................................................................................1820.5010100000000
..................................................................................CGTCTTATCCATGTGGTTGGTCT----.............................................................................................................................................................................................................................2320.5010000100000
...........................................................................AACGGGGCGTCTTATCCATGTGGC.......................................................................................................................................................................................................................................2420.5010001000000
...................C---A---C-AGCCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................1920.5010000100000
........................................................................G-GAACGGGGCGTCTTATCCA.............................................................................................................................................................................................................................................2020.5010100000000
..................................................................CAAGTGG-GAACGGGGCGTCTTATCCA.............................................................................................................................................................................................................................................2620.5010010000000
......................................................G-TTTGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2620.5010000001000
..............................................................AGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2020.5010100000000
.........................................................TTGCTAGATCAAGTGG-GAACGGGGCGTCT...................................................................................................................................................................................................................................................2920.5010010000000
...................................................................AAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................1820.5010100000000
.........................................................TTGCTAGATCAAGTGG-GAACGGC.........................................................................................................................................................................................................................................................2320.5010010000000
...........................................................................AACGGGGCGTCTTATCCATGT..........................................................................................................................................................................................................................................2120.5010100000000
................................................................ATCAAGTGG-GAACGGGGCGTCT...................................................................................................................................................................................................................................................2220.5010010000000
........................................................TTTGCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................2420.5010100000000
...........................................................GCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................2120.5010100000000
.....................................................AG-TTTGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2820.5010010000000
.......................................GATGACAATTTGTTAG-TTTGCTAGATC.......................................................................................................................................................................................................................................................................2720.5010010000000
..............................................................................GGGGCGTCTTATCCATGTGGTTGGTC..................................................................................................................................................................................................................................2620.5010000100000
............................................................................ACGGGGCGTCTTATCCATG...........................................................................................................................................................................................................................................1920.5010100000000
........................................................TTTGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................2020.5010100000000
..........................................................................GAACGGGGCGTCTTATCCATGTG.........................................................................................................................................................................................................................................2320.5010010000000
..........................................................TGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................1820.5010100000000
.................................................................................GCGTCTTATCCATGTGGTTGGTC..................................................................................................................................................................................................................................2320.5010010000000
......................................................G-TTTGCTAGATCAAGTGG-G...............................................................................................................................................................................................................................................................1920.5010100000000
.......GTCACATTGAAAC---A---C-AGCCTCA......................................................................................................................................................................................................................................................................................................2220.5010000100000
...................C---A---C-AGCCTCATGTGATGACA............................................................................................................................................................................................................................................................................................2020.5010000100000
.............................................................................CGGGGCGTCTTATCCATGTGGTTGGTC..................................................................................................................................................................................................................................2720.5010001000000
......................................................G-TTTGCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................2420.5010100000000
...........................................................GCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2320.5010010000000
...................................................................................GTCTTATCCATGTGGTTGG....................................................................................................................................................................................................................................1920.5010100000000
......................................................G-TTTGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2320.5010100000000
...............................................................GATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................1920.5010000001000
.................................................................TCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................1920.5010100000000
..........................................................TGCTAGATCAAGTGG-GAACGGGGCG......................................................................................................................................................................................................................................................2520.5010100000000
.......................................................................................TATCCATGTGGTTGGTCT----.............................................................................................................................................................................................................................1820.5010000100000
.......................................GATGACAATTTGTTAG-TTTGCTAG..........................................................................................................................................................................................................................................................................2420.5010000001000
............................................................................ACGGGGCGTCTTATCCATGTGGTT......................................................................................................................................................................................................................................2420.5010100000000
....TGTGTCACATTGAAAC---A---C-AGCCTCATGT...................................................................................................................................................................................................................................................................................................2820.5010100000000
....TGTGTCACATTGAAAC---A---C-AGC..........................................................................................................................................................................................................................................................................................................2120.5010100000000
.....................................................AG-TTTGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................2220.5010100000000
..........ACATTGAAAC---A---C-AGCCTCATGTGATGACA............................................................................................................................................................................................................................................................................................2920.5010100000000
........................................................TTTGCTAGATCAAGTGG-GAACGGGGCG......................................................................................................................................................................................................................................................2720.5010100000000
....................................................TAG-TTTGCTAGATCAAGTGA-................................................................................................................................................................................................................................................................2020.5010100000000
........................................................TTTGCTAGATCAAGTGG-GAG.............................................................................................................................................................................................................................................................2020.5010100000000
......................................................G-TTTGCTAGATCAAGTGG-................................................................................................................................................................................................................................................................1820.5010100000000
....................................................TAG-TTTGCTAGATCAAGTG..................................................................................................................................................................................................................................................................1920.5010100000000
droPer2
ACTCTGTGTCACATTGAAAC---A---C-TGCCTCATGTGATGACAATTTGTTAG-TTTGCTAGATCAAGTGG-GAACGGGGCGTCTTATCCATGTGGTTGGTCT----ATAACCAAGCTAATCACATTGAAAACGCTCCTTACACGACCTCACCGC---TA-TGATAGCAGCACTAAGCA--CTA-TAATCCTAGTTTTAAG------CT-T----AATAT--CGCTGTAATTGA---------CAC----TTTTTCGTCGTTGTGTG--TCCTTGCAGGTGATTCGGCCGTTCCTGCTGCGACGCCTCAAGAAGGAGGTGGAGAAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................ATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................22111.0011262100
.............................................................................................................................CATTGAAAACGCTCCTTACACGAC.....................................................................................................................................................................................24110.00101000000
.............................................................................................................................CATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2317.007430000
.........................................................TTGCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................2336.67200164000
..............................................................................................................................ATTGAAAACGCTCCTTACACGAC.....................................................................................................................................................................................2315.005410000
.........................................................TTGCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................2234.33130130000
................................................................................................................................TGAAAACGCTCCTTACACGA......................................................................................................................................................................................2014.004040000
........................................................TTTGCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................2434.00120120000
...............................................................................................................................TTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2114.004040000
...........................................................................AACGGGGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2433.3310050131
..........................................................TGCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................2233.009090000
.........................................................TTGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2432.678061001
.......GTCACATTGAAAC---A---C-TGCCT........................................................................................................................................................................................................................................................................................................2022.505401000
.................................................................................................................................GAAAACGCTCCTTACACGA......................................................................................................................................................................................1912.002020000
..........................................................TGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2432.006121002
..........................................................................................................................TCACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2612.002020000
...........................................................GCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2231.675000005
.........................................................TTGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................1931.675040001
........................................................TTTGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2531.675050000
..........................................................TGCTAGATCAAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................2731.675050000
..........................................................TGCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................2131.334040000
.........................................................TTGCTAGATCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................2731.334040000
............................................................................................................................ACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2411.001010000
..........................................................................................................................TCACATTGAAAACGCTCCTTAC..........................................................................................................................................................................................2211.001010000
.......................................GATGACAATTTGTTAG-TTTGCTAG..........................................................................................................................................................................................................................................................................2431.003003000
...........................................................................AACGGGGCGTCTTATCCATGTGG........................................................................................................................................................................................................................................2331.003000102
.............TTGAAAC---A---C-TGCCTCATGT...................................................................................................................................................................................................................................................................................................1921.002010001
..............................................................................................................................ATTGAAAACGCTCCTTACACGACCT...................................................................................................................................................................................2511.001100000
.......................................................................................................................................................................................................................................................................................GGTGATTCGGCCGTTCCTGCTGC............................2311.001010000
...............................................................GATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................1831.003000003
.........................................................TTGCTAGATCAAGTGG-GAACGGGGCG......................................................................................................................................................................................................................................................2631.003030000
.....................................................................................................................................................................................................................................................................................................................CAAGAAGGAGGTGGAGAAGC.2011.001010000
...................................................................................................................................AAACGCTCCTTACACGAC.....................................................................................................................................................................................1811.001100000
...................................................................................................................................................................................................................................................................................................GTTCCTGCTGCGACGCCTCAAGAAGGA............2711.001001000
.........................................................TTGCTAGATCAAGTGG-GA..............................................................................................................................................................................................................................................................1831.003210000
...........................................................................................................................CACATTGAAAACGCTCCTTAC..........................................................................................................................................................................................2111.001010000
.........................................................TTGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2531.003020001
...................................................................................................................AAGCTAATCACATTGAAAACG..................................................................................................................................................................................................2111.001001000
.........................................................................................................................ATCACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2711.001010000
..........................................................................................................................................................................................................................................................................................GATTCGGCCGTTCCTGCTGCGACGCCT.....................2711.001100000
...........................................................................................................................CACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2511.001010000
...........................................................................................................................................................................................................................................................................................ATTCGGCCGTTCCTGCTGC............................1911.001100000
..................................................................................................................................AAAACGCTCCTTACACGA......................................................................................................................................................................................1811.001010000
..........................................................TGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2331.003030000
.........................................................TTGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2131.003021000
............................................CAATTTGTTAG-TTTGCTAGAT........................................................................................................................................................................................................................................................................2130.672200000
.........................................................TTGCTAGATCAAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................2830.672020000
..................................................GTTAG-TTTGCTAGATCAAGT...................................................................................................................................................................................................................................................................2030.672100001
........................................................TTTGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2630.672010010
........................................................TTTGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................2030.672020000
........................................................TTTGCTAGATCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................2830.672020000
.............................................AATTTGTTAG-TTTGCTAG..........................................................................................................................................................................................................................................................................1830.672200000
..........................................................TGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2030.672020000
.............................................AATTTGTTAG-TTTGCTAGATC.......................................................................................................................................................................................................................................................................2130.672200000
...............................................................GATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................1930.672010001
.............................................AATTTGTTAG-TTTGCTAGATCAAGT...................................................................................................................................................................................................................................................................2530.672200000
...........................................................GCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................2030.672010001
................................................................................GGCGTCTTATCCATGTGGTT......................................................................................................................................................................................................................................2030.672011000
..........................................................TGCTAGATCAAGTGG-GAACGGGGCGTCT...................................................................................................................................................................................................................................................2830.672010001
..........................................................TGCTAGATCAAGTGG-GAAC............................................................................................................................................................................................................................................................1930.672010001
..................AC---A---C-TGCCTCATGTGATGACA............................................................................................................................................................................................................................................................................................2120.501100000
.........CACATTGAAAC---A---C-TGCCTCATGT...................................................................................................................................................................................................................................................................................................2320.501100000
......TGTCACATTGAAAC---A---C-TGCCTC.......................................................................................................................................................................................................................................................................................................2220.501010000
..................AC---A---C-TGCCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................2020.501001000
.......................A---C-TGCCTCATGTGATGACAATTTGTTA....................................................................................................................................................................................................................................................................................2720.501010000
..................AC---A---C-TGCCTCATGTGATGG..............................................................................................................................................................................................................................................................................................1920.501100000
............ATTGAAAC---A---C-TGCCTCATGT...................................................................................................................................................................................................................................................................................................2020.501010000
......................................................................................TTATCCATGTGGTTGGTC..................................................................................................................................................................................................................................1830.331001000
...................................................................AAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................1830.331000001
.................................................................................GCGTCTTATCCATGTGGTTG.....................................................................................................................................................................................................................................2030.331100000
.....................................................................GTGG-GAACGGGGCGTCTT..................................................................................................................................................................................................................................................1830.331010000
..........................................................TGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................1830.331000001
............................................................CTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................1930.331010000
...........................................ACAATTTGTTAG-TTTGCTAG..........................................................................................................................................................................................................................................................................2030.331010000
................................................................ATCAAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................2130.331010000
.......................................GATGACAATTTGTTAG-TTTGCTAGAT........................................................................................................................................................................................................................................................................2630.331010000
....................................................TAG-TTTGCTAGATCAAGTGG-G...............................................................................................................................................................................................................................................................2130.331001000
...........................................................GCTAGATCAAGTGG-GAACGGGGCGTCT...................................................................................................................................................................................................................................................2730.331010000
............................................................................ACGGGGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2330.331010000
..................................................GTTAG-TTTGCTAGATCAAGTGG-GA..............................................................................................................................................................................................................................................................2430.331010000
.....................................................AG-TTTGCTAGATCAAGTGG-................................................................................................................................................................................................................................................................1930.331010000
...........................................................GCTAGATCAAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................2630.331010000
........................................................TTTGCTAGATCAAGTGG-G...............................................................................................................................................................................................................................................................1830.331010000
....................................................TAG-TTTGCTAGATCAAGT...................................................................................................................................................................................................................................................................1830.331100000
...................................................................................GTCTTATCCATGTGGTTGGTC..................................................................................................................................................................................................................................2130.331100000
......................................................................................TTATCCATGTGGTTGGTCT----.............................................................................................................................................................................................................................1930.331010000
..............................................................AGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2030.331001000
...........................................................................AACGGGGCGTCTTATCCATGTGGC.......................................................................................................................................................................................................................................2430.331010000
................................................TTGTTAG-TTTGCTAGATCAAGT...................................................................................................................................................................................................................................................................2230.331100000
..................................................................CAAGTGG-GAACGGGGCGTCTT..................................................................................................................................................................................................................................................2130.331010000
..................................CATGTGATGACAATTTGTTAG-T.................................................................................................................................................................................................................................................................................2230.331001000
................................................................................GGCGTCTTATCCATGTGGTTG.....................................................................................................................................................................................................................................2130.331010000
...............................................................GATCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................2130.331000001
..........................................................TGCTAGATCAAGTGG-GAACGGGGCG......................................................................................................................................................................................................................................................2530.331000001
...........................................................GCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2330.331000001
.........................................TGACAATTTGTTAG-TTTGCTA...........................................................................................................................................................................................................................................................................2130.331001000
..............................................................................GGGGCGTCTTATCCATGTGGTTG.....................................................................................................................................................................................................................................2330.331001000
........................................................TTTGCTAGATCAAGTGG-GAAC............................................................................................................................................................................................................................................................2130.331010000
...........................................................................AACGGGGCGTCTTATCCATGTGGTT......................................................................................................................................................................................................................................2530.331001000
........................................ATGACAATTTGTTAG-TTTG..............................................................................................................................................................................................................................................................................1930.331001000
............................................................CTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2230.331001000
..................................................GTTAG-TTTGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2730.331000001
..........................................................TGCTAGATCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................2630.331010000
................................................................ATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................1830.331000001
.............................................................................CGGGGCGTCTTATCCATGTG.........................................................................................................................................................................................................................................2030.331010000
........................................................TTTGCTAGATCAAGTGG-GA..............................................................................................................................................................................................................................................................1930.331010000
.........................................TGACAATTTGTTAG-TTTGCTAGAT........................................................................................................................................................................................................................................................................2430.331100000
........................................................TTTGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2230.331010000
..............................................................AGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................1930.331000001
.......................................................................................TATCCATGTGGTTGGTCT----.............................................................................................................................................................................................................................1830.331100000
droWil2
ACTCTGTGTCACATTCGA---------C-AACCTCATGTGAATACAATTTGTAAT-TTTGCCAGAGTAAG------GTGTAGCTTCTTATCCATGTGATAAGATT----CCTAACAAGCTAATCACTTTGACGATGTCTAAGACAG--CTTTT---------------------------------------------TCAGT------TC-AATTGAT------AAAGTGACTC--ATG-----TTT----A---TTCTCTTTGTCTGTCTTTTATTAGGTTATACGACCCTTTCTGTTGCGTCGTCTCAAAAAGGAAGTGGAGAAGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................TTGCCAGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................24425.0010016121764
........................................................TTTGCCAGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................25418.0072111762
.........................................................TTGCCAGAGTAAG------GTGTAGCTTC....................................................................................................................................................................................................................................................23410.25419100121
..........................................................TGCCAGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................2349.0036555021
..........................................................TGCCAGAGTAAG------GTGTAGCTTC....................................................................................................................................................................................................................................................2248.7535274022
.........................................................TTGCCAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2548.2533364614
..........................................................TGCCAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2445.2521011604
..........................................................TGCCAGAGTAAG------GTGTAGCTT.....................................................................................................................................................................................................................................................2145.0020021530
..........................................................................................CCATGTGATAAGATT----CCTAACAAGC...................................................................................................................................................................................................................2515.00502030
.........................................................TTGCCAGAGTAAG------GTGTAGCTTCTTAT................................................................................................................................................................................................................................................2745.002005528
..........................................................TGCCAGAGTAAG------GTGTAGCTTCTTATC...............................................................................................................................................................................................................................................2743.251301444
..........................................................TGCCAGAGTAAG------GTGTAGCT......................................................................................................................................................................................................................................................2043.001200840
.........................................................TTGCCAGAGTAAG------GTGTAGCTT.....................................................................................................................................................................................................................................................2242.501005221
.........................................................TTGCCAGAGTAAG------GTGTAGCTTCTTA.................................................................................................................................................................................................................................................2642.501003034
...........................................................GCCAGAGTAAG------GTGTAGCTT.....................................................................................................................................................................................................................................................2042.25902520
.........................................................................................TCCATGTGATAAGATT----CCTAACAAGC...................................................................................................................................................................................................................2612.00202000
..........................................................TGCCAGAGTAAG------GTGTAGCTTCTTAT................................................................................................................................................................................................................................................2642.00800602
........................................................TTTGCCAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2642.00801322
.........................................................TTGCCAGAGTAAG------GTGTAGCT......................................................................................................................................................................................................................................................2141.75702410
...........................................................GCCAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2341.50600510
..........................................................TGCCAGAGTAAG------GTGTAGC.......................................................................................................................................................................................................................................................1941.50601500
...................................................................AAG------GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2431.33400310
...........................................................GCCAGAGTAAG------GTGTAGCT......................................................................................................................................................................................................................................................1941.25501310
........................................................TTTGCCAGAGTAAG------GTGTAGCTTC....................................................................................................................................................................................................................................................2441.25500023
................................................................................................................................................................................................................................................................................................................CGTCTCAAAAAGGAAGTGGA......2011.00100010
.....................................................................G------GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2231.00302010
...........................................................................................................................................................................................................................................................................................ATACGACCCTTTCTGTTGCGTC.........................2211.00101000
...........................................................................................................................................................................................................................................................................................................TGCGTCGTCTCAAAAAGGAAGT.........2211.00100010
.............................................AATTTGTAAT-TTTGCCAGA.........................................................................................................................................................................................................................................................................1911.00100100
.................................................................................................ATAAGATT----CCTAACAAGCT..................................................................................................................................................................................................................1911.00100010
.....................................................................................................................................................................................................................................................................................................TTCTGTTGCGTCGTCTCAAA.................2011.00100010
...............................................................................................................................................................................................................................................................................................GACCCTTTCTGTTGCGTCGTCT.....................2211.00100100
.........................................................................................TCCATGTGATAAGATT----CCTAACAAGCT..................................................................................................................................................................................................................2711.00100010
................................................................................................................................TGACGATGTCTAAGACAG--CT....................................................................................................................................................................................2011.00100010
..........................................................................................CCATGTGATAAGATT----CCTAA........................................................................................................................................................................................................................2011.00101000
....................................................AAT-TTTGCCAGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................2811.00100100
......................................................T-TTTGCCAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2711.00100100
........................................................TTTGCCAGAGTAAG------GTGTAGCTT.....................................................................................................................................................................................................................................................2341.00400220
...................................................................................................................................................................................................................................................................................................................CTCAAAAAGGAAGTGGAGA....1911.00100010
.............................................................CAGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................2041.00400310
.............................................................CAGAGTAAG------GTGTAGCTTCTTAT................................................................................................................................................................................................................................................2341.00400400
..........................................................................................................................................................................................................................................................................................TATACGACCCTTTCTGTTGCGTC.........................2311.00100100
...........................................................................................CATGTGATAAGATT----CCTAACAAGC...................................................................................................................................................................................................................2411.00100010
....................................................AAT-TTTGCCAGAGTAAG------GT............................................................................................................................................................................................................................................................1911.00100100
..................................................................TAAG------GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2531.00300120
........................................................................................ATCCATGTGATAAGATT----CCTAACAAGC...................................................................................................................................................................................................................2711.00100010
...........................C-AACCTCATGTGAATACAATTT........................................................................................................................................................................................................................................................................................2211.00101000
..............................................................AGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................1940.75300300
..............................................................AGAGTAAG------GTGTAGCTTCTTATC...............................................................................................................................................................................................................................................2340.75300210
.................................................................GTAAG------GTGTAGCTTCTTA.................................................................................................................................................................................................................................................1840.75300030
.............................................................CAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2140.75300300
.........................................................TTGCCAGAGTAAG------GTGTAGCTTCTTATC...............................................................................................................................................................................................................................................2840.75301002
.............................................................CAGAGTAAG------GTGTAGCTTCTTATC...............................................................................................................................................................................................................................................2440.75300300
........................................................TTTGCCAGAGTAAG------GTGTAGCTTCTTAT................................................................................................................................................................................................................................................2840.75301101
...........................................................GCCAGAGTAAG------GTGTAGCTTCTTAT................................................................................................................................................................................................................................................2540.75300210
..........................................................TGCCAGAGTAAG------GTGTAGCTTCTTA.................................................................................................................................................................................................................................................2540.75301110
.................................................................GTAAG------GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2630.67201010
.........................................................TTGCCAGAGTAAG------GTGTAGCTTCTTATCC..............................................................................................................................................................................................................................................2940.50211000
........................................................TTTGCCAGAGTAAG------GTGTAGCTTCTTATC...............................................................................................................................................................................................................................................2940.50200110
...................................................................AAG------GTGTAGCTTCTTATCC..............................................................................................................................................................................................................................................1940.50200020
........................................................TTTGCCAGAGTAAG------GTGTAGCTTCTTA.................................................................................................................................................................................................................................................2740.50201001
..............................................................AGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2040.50200200
..................................................................TAAG------GTGTAGCTTCTTATCCATGT..........................................................................................................................................................................................................................................2430.33100010
.................................................................GTAAG------GTGTAGCTTCTTATCCATGT..........................................................................................................................................................................................................................................2530.33100100
...................................................................AAG------GTGTAGCTTCTTATCCATG...........................................................................................................................................................................................................................................2230.33100100
....................................................................AG------GTGTAGCTTCTTATCCATGT..........................................................................................................................................................................................................................................2230.33100100
................................................................AGTAAG------GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2730.33100100
....................................................................AG------GTGTAGCTTCTTATCCATGTGA........................................................................................................................................................................................................................................2430.33100001
.....................................................................G------GTGTAGCTTCTTATCCATG...........................................................................................................................................................................................................................................2030.33100010
.................................................................GTAAG------GTGTAGCTTCTTATCCATGTGAT.......................................................................................................................................................................................................................................2830.33100100
............................................................................GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2130.33100010
...................................................................AAG------GTGTAGCTTCTTATCCATGTGA........................................................................................................................................................................................................................................2530.33100010
.................................................................GTAAG------GTGTAGCTTCTTATCCATG...........................................................................................................................................................................................................................................2430.33100010
...............................................................GAGTAAG------GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2830.33100100
..........................................................TGCCAGAGTAAG------GTGTAGCTTCTTATCC..............................................................................................................................................................................................................................................2840.25100001
........................................................TTTGCCAGAGTAAG------GTGTAGC.......................................................................................................................................................................................................................................................2140.25100100
.............................................................CAGAGTAAG------GTGTAGCTTCC...................................................................................................................................................................................................................................................2040.25100100
.........................................................TTGCCAGAGTAAG------GTGTAG........................................................................................................................................................................................................................................................1940.25101000
...........................................................GCCAGAGTAAG------GTGTAGCTTC....................................................................................................................................................................................................................................................2140.25100001
.............................................................CAGAGTAAG------GTGTAGCTT.....................................................................................................................................................................................................................................................1840.25100100
...........................................................GCCAGAGTAAG------GTGTAGCTTCTTA.................................................................................................................................................................................................................................................2440.25100001
...........................................................GCCAGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................2240.25100001
..............................................................AGAGTAAG------GTGTAGCTTCTTA.................................................................................................................................................................................................................................................2140.25100100
.........................................................TTGCCAGAGTAAG------GTGTAGC.......................................................................................................................................................................................................................................................2040.25100100
.............................................................CAGAGTAAG------GTGTAGCTTCTTATCC..............................................................................................................................................................................................................................................2540.25100010
................................................................AGTAAG------GTGTAGCTTCTTAT................................................................................................................................................................................................................................................2040.25100100
...........................................................GCCAGAGTAAG------GTGTAGCTTCTTATC...............................................................................................................................................................................................................................................2640.25100100
............................................................CCAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2240.25100100
............................................................CCAGAGTAAG------GTGTAGCTT.....................................................................................................................................................................................................................................................1940.25101000
droVir3
ACTCTGTATCACATAAAATTTTTA---T-AACCTCATGTGA-GACAATTTAATAC-CTTGCTAGATTAAATTA---AAGCTGCGACTTATCCATGTGTTCGTGTC----CTTAT--AACTGATCACATTGAATACGCGCTATACACTAGTTC-TTG--AATA-AA------------------T-A-TTCC--TAATTATAAG------T----------------CAGTAA---GCATGTTTTGATTG---T---TTATTTTTCTTTT--TTTATTCAGGTCATTCGTCCATTTCTGCTGCGTCGCCTTAAAAAGGAGGTGGAAAAGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................ATTGAATACGCGCTATACACT.......................................................................................................................................................................................2117.007002000000000000003000000000000000000000000000000000000000001010
...........................................................................................................................CACATTGAATACGCGCTATACACT.......................................................................................................................................................................................2417.007106000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................ATTGAATACGCGCTATACACTA......................................................................................................................................................................................2216.006004200000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CACATTGAATACGCGCTATACACTA......................................................................................................................................................................................2515.005003000000000000011000000000000000000000000000000000000000000000
.........................................................TTGCTAGATTAAATTA---AAGCTGCGA.....................................................................................................................................................................................................................................................2524.509000010100000002100000000000000000000400000000000000000000000000
...............................................................................................................................TTGAATACGCGCTATACACTA......................................................................................................................................................................................2114.004003000000000000001000000000000000000000000000000000000000000000
............................................................................................................................ACATTGAATACGCGCTATACACT.......................................................................................................................................................................................2314.004002000000000000001000000000000000100000000000000000000000000000
..........................................................TGCTAGATTAAATTA---AAGCTGCG......................................................................................................................................................................................................................................................2323.507001000000000002300000000100000000000000000000000000000000000000
........................................................CTTGCTAGATTAAATTA---AAGCTGCG......................................................................................................................................................................................................................................................2523.507001000000000000500000000000000000000100000000000000000000000000
...........................................................................................CATGTGTTCGTGTC----CTTAT--......................................................................................................................................................................................................................1913.003000000000000000000000000000000000000000000000000000000000000003
.............................................................................................................................CATTGAATACGCGCTATACACT.......................................................................................................................................................................................2213.003001000000000000001000000000000000000000000000000000000000000010
.............................................................................................................................CATTGAATACGCGCTATACACTA......................................................................................................................................................................................2313.003001100000000000000000000000000000000000000000000000000000000010
............................................................................................................................ACATTGAATACGCGCTATACACTA......................................................................................................................................................................................2413.003003000000000000000000000000000000000000000000000000000000000000
........................................................CTTGCTAGATTAAATTA---AAGCTGCGACT...................................................................................................................................................................................................................................................2813.003000100000000000000000000000000000010000000000000000000000010000
........................................................CTTGCTAGATTAAATTA---AAGCTGCGA.....................................................................................................................................................................................................................................................2622.505002000000000000300000000000000000000000000000000000000000000000
........................................................CTTGCTAGATTAAATTA---AAGCTGC.......................................................................................................................................................................................................................................................2422.505003000000000001100000000000000000000000000000000000000000000000
.........................................................TTGCTAGATTAAATTA---AAGCTGC.......................................................................................................................................................................................................................................................2322.004002000000000000000000001000000000010000000000000000000000000000
...............................................................................................................................TTGAATACGCGCTATACACT.......................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
...................................................................................GACTTATCCATGTGTTCGTGTC----.............................................................................................................................................................................................................................2212.002000100000000010000000000000000000000000000000000000000000000000
...........................................................................................CATGTGTTCGTGTC----CTTAT--AACTGAT...............................................................................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000002
.............................................................................AGCTGCGACTTATCCATGTGTT.......................................................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000002000
.........................................................TTGCTAGATTAAATTA---AAGCT.........................................................................................................................................................................................................................................................2122.004000000000000000100000000000000000000300000000000000000000000000
...................................ATGTGA-GACAATTTAATAC-..................................................................................................................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000002
...........................................................................................CATGTGTTCGTGTC----CTTAT--AACT..................................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000002
..................................CATGTGA-GACAATTTAATAC-CTTGC.............................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TCATTCGTCCATTTCTGCTGCG...........................2211.001100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AAAAAGGAGGTGGAAAAG..1811.001000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TGCTGCGTCGCCTTAAAAAGGAGGT.........2511.001000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................ATTGAATACGCGCTATACACTAGTTC-.................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................GTGTC----CTTAT--AACTGATC..............................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000001
........................................................................A---AAGCTGCGACTTATCCATGTGTTCGTGT..................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................CGTGTC----CTTAT--AACTGATC..............................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
....................................................TAC-CTTGCTAGATTAAATTA---AAGCTGC.......................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................CATGTGTTCGTGTC----CTT..........................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................GCTGCGACTTATCCATGTGTT.......................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................AT--AACTGATCACATTGAATACG..................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................CGTGTC----CTTAT--AACTGATCACATC.........................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................ACTTATCCATGTGTTCGTGTC----.............................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................ATAC-CTTGCTAGATTAAAT...................................................................................................................................................................................................................................................................1911.001000000000000000000000000100000000000000000000000000000000000000
...................................................................................................CGTGTC----CTTAT--AACTGATCACATTGAA......................................................................................................................................................................................................2711.001000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................CTTAT--AACTGATCACATTGAATACGC.................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................CTTGCTAGATTAAATTA---AAGCTGCGAC....................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CATTGAATACGCGCTATACAC........................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................CTTATCCATGTGTTCGTGTC----C............................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
....................................................TAC-CTTGCTAGATTAAATTA---AAGCTGCG......................................................................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CATTCGTCCATTTCTGCTGC............................2011.001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................CGTCCATTTCTGCTGCGTCGCCTTAAA.................2711.001000000000001000000000000000000000000000000000000000000000000000
..............................................................................................................................ATTGAATACGCGCTATACACTAC.....................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
.................................TCATGTGA-GACAATTTAATAC-CT................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TTCTGCTGCGTCGCCTTAAAAAGGAGG..........2711.001000000000000000000000000000000000000100000000000000000000000000
.........................................................TTGCTAGATTAAATTA---AAGCTGCGACT...................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
.........................................................TTGCTAGATTAAATTA---AAGCTGCGAC....................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................ATTGAATACGCGCTATACA.........................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CACATTGAATACGCGCTATACAC........................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.............................AACCTCATGTGA-GACAATTTAATAC-C.................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000001000000000000000000000000000
...............................CCTCATGTGA-GACAATTTAATAC-CTT...............................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................TA---AAGCTGCGACTTATCCATG...........................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.....................................................AC-CTTGCTAGATTAAATTA---AAGCTGCG......................................................................................................................................................................................................................................................2721.002001000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TTAAAAAGGAGGTGGAAAA...1911.001000000000000010000000000000000000000000000000000000000000000000
....................................TGTGA-GACAATTTAATAC-CTTGC.............................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................GTTCGTGTC----CTTAT--AACTGATC..............................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000001
..................................................AATAC-CTTGCTAGATTAAAT...................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.............................................................TAGATTAAATTA---AAGCTGCGACTTATC...............................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................ATTGAATACGCGCTATACACTAG.....................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
............................................................................AAGCTGCGACTTATCCATGT..........................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................TTATCCATGTGTTCGTGTC----C............................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................TGAATACGCGCTATACACT.......................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................ATTGAATACGCGCTATACAC........................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
......................................................C-CTTGCTAGATTAAATTA---AAGCTGCGAC....................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................CGTGTC----CTTAT--AACTGATCACAT..........................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CTTAT--AACTGATCACATTGA.......................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................CCATGTGTTCGTGTC----CTTAT--AACTGAT...............................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................TTAT--AACTGATCACATTGAATACGC.................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................T--AACTGATCACATTGAATACGCGCTT.............................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000010000
.............................................................................................................................CATTGAATACGCGCTATACACC.......................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................AACTGATCACATTGAATACGCGCTA.............................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................TAT--AACTGATCACATTGAATACGCGCT..............................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................AT--AACTGATCACATTGAATACGC.................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................TGTGTTCGTGTC----CTTAT--AACTGA................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................GATCACATTGAATACGCGCTATACACT.......................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................AACTGATCACATTGAATACGCGCT..............................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CACATTGAATACGCGCTATACACTAG.....................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................GAATACGCGCTATACACTA......................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................AATAC-CTTGCTAGATTAAATTA---AAGCTGC.......................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CATTGAATACGCGCTATACACTAG.....................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.............................AACCTCATGTGA-GACAATTT........................................................................................................................................................................................................................................................................................2020.501000000000000001000000000000000000000000000000000000000000000000
..........................................................TGCTAGATTAAATTA---AAGCT.........................................................................................................................................................................................................................................................2020.501000000010000000000000000000000000000000000000000000000000000000
........................................................CTTGCTAGATTAAATTA---AAGCT.........................................................................................................................................................................................................................................................2220.501000000000000000100000000000000000000000000000000000000000000000
..............AAAATTTTTA---T-AACCTCATGTGA-GAC.............................................................................................................................................................................................................................................................................................2620.501000100000000000000000000000000000000000000000000000000000000000
.................ATTTTTA---T-AACCTCATGTGA-GACA............................................................................................................................................................................................................................................................................................2420.501000100000000000000000000000000000000000000000000000000000000000
.........................................................TTGCTAGATTAAATTA---AAGCTG........................................................................................................................................................................................................................................................2220.501100000000000000000000000000000000000000000000000000000000000000
................AATTTTTA---T-AACCTCATGT...................................................................................................................................................................................................................................................................................................1920.501001000000000000000000000000000000000000000000000000000000000000
......................................................C-CTTGCTAGATTAAATTA---AAGCTGCG......................................................................................................................................................................................................................................................2620.501000000000000000100000000000000000000000000000000000000000000000
.......................A---T-AACCTCATGTGA-GACAATTT........................................................................................................................................................................................................................................................................................2220.501000000000000001000000000000000000000000000000000000000000000000
........................................................CTTGCTAGATTAAATTA---AAG...........................................................................................................................................................................................................................................................2020.501000100000000000000000000000000000000000000000000000000000000000
.........................................................TTGCTAGATTAAATTA---AAGCTGCG......................................................................................................................................................................................................................................................2420.501001000000000000000000000000000000000000000000000000000000000000
..............AAAATTTTTA---T-AACCTCATGTGA-GACA............................................................................................................................................................................................................................................................................................2720.501000000000000000001000000000000000000000000000000000000000000000
......................................................C-CTTGCTAGATTAAATTA---AAGCTGCGA.....................................................................................................................................................................................................................................................2720.501000000000000000100000000000000000000000000000000000000000000000
..........................................................TGCTAGATTAAATTA---AAGCTGCGA.....................................................................................................................................................................................................................................................2420.501000000000000000100000000000000000000000000000000000000000000000
........................................................CTTGCTAGATTAAATTA---AAGCTG........................................................................................................................................................................................................................................................2320.501001000000000000000000000000000000000000000000000000000000000000
.............................................................TAGATTAAATTA---AAGCTGC.......................................................................................................................................................................................................................................................1920.501000100000000000000000000000000000000000000000000000000000000000
droMoj3
ACTCTGTGTCACATTGAAT----------TATCTCATGTGATGACAATTTGTTACCCTTGCTAGAGTAAGTTGATGAAGCTGCGACTTATCCATGTGATTGAGTT----TTT-CC-AGCTGATTGCATTGAATGCGCGCTTTACATTACTTT--TA--TTCA-TAT---------------ATTT-ATATA-------TCAGTATCAATTT-G----AGA-A--AGTATTAA-------------AATACCTA--------TTTCTCTT--TCTTTATAGGTTATTCGTCCATTTCTGCTGCGTCGGCTTAAAAAAGAGGTGGAGAAGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................TTGCTAGAGTAAGTTGATGAAGCTGCGA.....................................................................................................................................................................................................................................................28154.00545000049
.........................................................TTGCTAGAGTAAGTTGATGAAGCTGCG......................................................................................................................................................................................................................................................27142.00422000040
.........................................................TTGCTAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................26142.00424032033
..............................................................................................................................ATTGAATGCGCGCTTTACATTA......................................................................................................................................................................................22139.00393300204
...............................................................................................................................TTGAATGCGCGCTTTACATTA......................................................................................................................................................................................21132.00322400008
.................................................................................................................................GAATGCGCGCTTTACATTA......................................................................................................................................................................................19128.00282700001
........................................................CTTGCTAGAGTAAGTTGATGAAGCTGCG......................................................................................................................................................................................................................................................28121.00212000019
...........................................................................................................................TGCATTGAATGCGCGCTTTACATTA......................................................................................................................................................................................25115.00151300002
................................................................................................................................TGAATGCGCGCTTTACATTA......................................................................................................................................................................................20113.00131100002
........................................................CTTGCTAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................27113.00133000010
.........................................................TTGCTAGAGTAAGTTGATGAAGCTG........................................................................................................................................................................................................................................................2519.009001107
..........................................................TGCTAGAGTAAGTTGATGAAGCTGCGA.....................................................................................................................................................................................................................................................2716.006101103
.................................................................................................................................GAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2016.006600000
..........................................................TGCTAGAGTAAGTTGATGAAGCTGCG......................................................................................................................................................................................................................................................2616.006000006
........................................................................................................T----TTT-CC-AGCTGATTGCATT.........................................................................................................................................................................................................1915.005500000
.......................................GATGACAATTTGTTACCCTTGCTAGA.........................................................................................................................................................................................................................................................................2615.005500000
..........................................................TGCTAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................2515.005000104
..................................................................................................................................AATGCGCGCTTTACATTAC.....................................................................................................................................................................................1915.005500000
........................................................................................................T----TTT-CC-AGCTGATTGCATTG........................................................................................................................................................................................................2015.005500000
.............................................................................................................................CATTGAATGCGCGCTTTACATTA......................................................................................................................................................................................2315.005001004
.............................................................................................................................CATTGAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2414.004100003
..............................................................................................................................ATTGAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2314.004200101
........................................................CTTGCTAGAGTAAGTTGATGAAGC..........................................................................................................................................................................................................................................................2413.003100002
.......................................GATGACAATTTGTTACCCTTGCTAG..........................................................................................................................................................................................................................................................................2513.003300000
..................................................................................................................................AATGCGCGCTTTACATTA......................................................................................................................................................................................1813.003300000
........................................................CTTGCTAGAGTAAGTTGATGAAGCT.........................................................................................................................................................................................................................................................2513.003100002
.............................................AATTTGTTACCCTTGCTAG..........................................................................................................................................................................................................................................................................1913.003300000
........................................................CTTGCTAGAGTAAGTTGATG..............................................................................................................................................................................................................................................................2013.003000003
...............................................................................................................................TTGAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2213.003000012
.............................................AATTTGTTACCCTTGCTAGAG........................................................................................................................................................................................................................................................................2113.003300000
........................................................CTTGCTAGAGTAAGTTGATGAAGCTG........................................................................................................................................................................................................................................................2613.003100101
........................................................................................................T----TTT-CC-AGCTGATTGCATTGA.......................................................................................................................................................................................................2112.002200000
...........................................................GCTAGAGTAAGTTGATGAAGCTG........................................................................................................................................................................................................................................................2312.002100001
........................................................CTTGCTAGAGTAAGTTGATGAAGCTGCGA.....................................................................................................................................................................................................................................................2912.002000002
..................................................................TAAGTTGATGAAGCTGCGACTTATCCA.............................................................................................................................................................................................................................................2712.002200000
..............................................................................................................TT-CC-AGCTGATTGCATTGAATGCGCGCT..............................................................................................................................................................................................2812.002200000
........................................................CTTGCTAGAGTAAGTTGATGAA............................................................................................................................................................................................................................................................2212.002100001
.......................................................................TGATGAAGCTGCGACTTATCCATGTGA........................................................................................................................................................................................................................................2712.002200000
.......................................................CCTTGCTAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................2812.002100001
..............................................................................................................TT-CC-AGCTGATTGCATTGAATGCGC.................................................................................................................................................................................................2512.002100100
.......................................GATGACAATTTGTTACCCTTGCTAGAG........................................................................................................................................................................................................................................................................2712.002200000
...........CATTGAAT----------TATCTCATGTGATGACAATTT........................................................................................................................................................................................................................................................................................2912.002200000
.........................................................TTGCTAGAGTAAGTTGATG..............................................................................................................................................................................................................................................................1912.002000002
..............................................................................................................................ATTGAATGCGCGCTTTACA.........................................................................................................................................................................................1912.002200000
............................................CAATTTGTTACCCTTGCTAGA.........................................................................................................................................................................................................................................................................2112.002200000
..............................................................................................................TT-CC-AGCTGATTGCATTGAATGCGCGC...............................................................................................................................................................................................2712.002200000
............ATTGAAT----------TATCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................2312.002200000
......................................................................................................GTT----TTT-CC-AGCTGATTGCATT.........................................................................................................................................................................................................2112.002200000
........................................................................................................T----TTT-CC-AGCTGATTGCATTGAATGC...................................................................................................................................................................................................2512.002200000
..............................................................................................................TT-CC-AGCTGATTGCATTGAATGCG..................................................................................................................................................................................................2412.002200000
...........................................................GCTAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................2412.002200000
.........................................................TTGCTAGAGTAAGTTGATGA.............................................................................................................................................................................................................................................................2012.002000002
.......................................................................TGATGAAGCTGCGACTTATC...............................................................................................................................................................................................................................................2012.002200000
..............................................ATTTGTTACCCTTGCTAGAGTAAG....................................................................................................................................................................................................................................................................2412.002200000
...........CATTGAAT----------TATCTCATGTG..................................................................................................................................................................................................................................................................................................1912.002200000
...................................................................................GACTTATCCATGTGATTGAGT..................................................................................................................................................................................................................................2112.002200000
.............................................................................AGCTGCGACTTATCCATGTGATTGA....................................................................................................................................................................................................................................2512.002200000
.................AT----------TATCTCATGTGATGACAATTT........................................................................................................................................................................................................................................................................................2312.002200000
....................................................................................................................AGCTGATTGCATTGAATGCGCGC...............................................................................................................................................................................................2312.002200000
.........................................................TTGCTAGAGTAAGTTGATGAA............................................................................................................................................................................................................................................................2112.002000002
.............................................AATTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2212.002200000
...........................................................GCTAGAGTAAGTTGATGAA............................................................................................................................................................................................................................................................1912.002200000
........................................................CTTGCTAGAGTAAGTTGATGA.............................................................................................................................................................................................................................................................2112.002000002
...........CATTGAAT----------TATCTCATGTGATGACA............................................................................................................................................................................................................................................................................................2512.002200000
.............................................AATTTGTTACCCTTGCTAGA.........................................................................................................................................................................................................................................................................2012.002100001
..............................................ATTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2112.002200000
...............................................TTTGTTACCCTTGCTAGAG........................................................................................................................................................................................................................................................................1912.002200000
...........CATTGAAT----------TATCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................2412.002200000
....................................................................................ACTTATCCATGTGATTGA....................................................................................................................................................................................................................................1811.001100000
..............................................................................................GTGATTGAGTT----TTT-CC-AGCTGA................................................................................................................................................................................................................2211.001100000
........................................................................GATGAAGCTGCGACTTATCCATGTGA........................................................................................................................................................................................................................................2611.001000001
................................................................AGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................1911.001100000
................................................................................TGCGACTTATCCATGTGAT.......................................................................................................................................................................................................................................1911.001010000
................................................................................................................................TGAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2111.001100000
.................................................................................................ATTGAGTT----TTT-CC-AGCTGATTGCATT.........................................................................................................................................................................................................2611.001100000
............................................................................................................................GCATTGAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2511.001000001
.............................................................................................................................CATTGAATGCGCGCTTTACATTACTT...................................................................................................................................................................................2611.001100000
..........................................................TGCTAGAGTAAGTTGATGA.............................................................................................................................................................................................................................................................1911.001000001
....................................................................AGTTGATGAAGCTGCGACTTATCCA.............................................................................................................................................................................................................................................2511.001100000
..................................................................................................TTGAGTT----TTT-CC-AGCTGATTGCATT.........................................................................................................................................................................................................2511.001100000
................AAT----------TATCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................1911.001100000
..................................................................TAAGTTGATGAAGCTGCGACTT..................................................................................................................................................................................................................................................2211.001100000
............................................CAATTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2311.001100000
.........................................TGACAATTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2611.001100000
.........................................................TTGCTAGAGTAAGTTGATGAAGCT.........................................................................................................................................................................................................................................................2411.001000001
......................................................................................................GTT----TTT-CC-AGCTGATTGCATTGA.......................................................................................................................................................................................................2311.001100000
.........................................................................ATGAAGCTGCGACTTATCC..............................................................................................................................................................................................................................................1911.001100000
...................................................................AAGTTGATGAAGCTGCGACTT..................................................................................................................................................................................................................................................2111.001000001
......................................................................................................GTT----TTT-CC-AGCTGATTGCATTGAATG....................................................................................................................................................................................................2611.001000010
.............................................................................................................TTT-CC-AGCTGATTGCATTGAATGCGCGC...............................................................................................................................................................................................2811.001100000
...................................................................AAGTTGATGAAGCTGCGAC....................................................................................................................................................................................................................................................1911.001000100
..................................................................................................TTGAGTT----TTT-CC-AGCTGATT..............................................................................................................................................................................................................2011.001100000
..........................................GACAATTTGTTACCCTTGCTAGAG........................................................................................................................................................................................................................................................................2411.001100000
.............TTGAAT----------TATCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................2211.001100000
.............................TATCTCATGTGATGACAATTTGTTACCCC................................................................................................................................................................................................................................................................................2911.001000010
........................................................................................................................GATTGCATTGAATGCGCGCTTTACATTA......................................................................................................................................................................................2811.001100000
..............................................................................................................TT-CC-AGCTGATTGCATTGAATG....................................................................................................................................................................................................2211.001100000
......................................................................TTGATGAAGCTGCGACTT..................................................................................................................................................................................................................................................1811.001100000
.......................................GATGACAATTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2811.001100000
........................................................................................................T----TTT-CC-AGCTGATTGCATTGAATGCGCGC...............................................................................................................................................................................................2911.001100000
................AAT----------TATCTCATGTGATGACAATTT........................................................................................................................................................................................................................................................................................2411.001100000
.............................................................................AGCTGCGACTTATCCATGTGATTG.....................................................................................................................................................................................................................................2411.001100000
...........................................................................................................................TGCATTGAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2611.001100000
..............................................................................................................................ATTGAATGCGCGCTTTACATT.......................................................................................................................................................................................2111.001100000
..............TGAAT----------TATCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................TGAAGCTGCGACTTATCCAT............................................................................................................................................................................................................................................2011.001100000
.....................................................................GTTGATGAAGCTGCGACTTAT................................................................................................................................................................................................................................................2111.001000001
.................AT----------TATCTCATGTGATGACA............................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................GCATTGAATGCGCGCTTTACATTA......................................................................................................................................................................................2411.001100000
................................CTCATGTGATGACAATTTGT......................................................................................................................................................................................................................................................................................2011.001000001
.......................................................CCTTGCTAGAGTAAGTTGATG..............................................................................................................................................................................................................................................................2111.001000001
.................................................................................................................................................................................................................................................................................................................GGCTTAAAAAAGAGGTGGAGA....2111.001000001
...............................................................................................................................TTGAATGCGCGCTTTACAT........................................................................................................................................................................................1911.001100000
.........................................................................................................................................................................................................................................................................................................GCTGCGTCGGCTTAAAAAAGAGGTGGA......2711.001000001
.........................................TGACAATTTGTTACCCTTGC.............................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................................CATTGAATGCGCGCTTTACATT.......................................................................................................................................................................................2211.001100000
.CTCTGTGTCACATTGAAT----------TATCTCATGT...................................................................................................................................................................................................................................................................................................2811.001000001
..................................................................TAAGTTGATGAAGCTGCGACT...................................................................................................................................................................................................................................................2111.001100000
............................................................CTAGAGTAAGTTGATGAAGC..........................................................................................................................................................................................................................................................2011.001000001
.....................................................................................................AGTT----TTT-CC-AGCTGATTGCATTG........................................................................................................................................................................................................2311.001100000
...............................................................GAGTAAGTTGATGAAGCTG........................................................................................................................................................................................................................................................1911.001000001
................................................................................................GATTGAGTT----TTT-CC-AGCTG.................................................................................................................................................................................................................1911.001000001
..........................................GACAATTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2511.001100000
............ATTGAAT----------TATCTCATGTGAT................................................................................................................................................................................................................................................................................................2011.001100000
......................................................................TTGATGAAGCTGCGACTTA.................................................................................................................................................................................................................................................1911.001100000
..........................................................TGCTAGAGTAAGTTGATGAAGCTG........................................................................................................................................................................................................................................................2411.001000001
..............................................ATTTGTTACCCTTGCTAGAGTA......................................................................................................................................................................................................................................................................2211.001100000
....................................................................AGTTGATGAAGCTGCGACTTATCCATGT..........................................................................................................................................................................................................................................2811.001100000
...............................................TTTGTTACCCTTGCTAGAGTA......................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................................AAAAAAGAGGTGGAGAAG..1811.001000001
........................................................................................................T----TTT-CC-AGCTGATTGCATTGAATGCG..................................................................................................................................................................................................2611.001100000
..................................................GTTACCCTTGCTAGAGTAAG....................................................................................................................................................................................................................................................................2011.001100000
.............................................................................AGCTGCGACTTATCCATGTGA........................................................................................................................................................................................................................................2111.001100000
........................................................................GATGAAGCTGCGACTTATCCATGT..........................................................................................................................................................................................................................................2411.001100000
.....................................................................GTTGATGAAGCTGCGACTTATCCA.............................................................................................................................................................................................................................................2411.001000100
................AAT----------TATCTCATGTGATGACAATT.........................................................................................................................................................................................................................................................................................2311.001100000
............................................................................................ATGTGATTGAGTT----TTT-CC-AGC...................................................................................................................................................................................................................2111.001100000
.......................................GATGACAATTTGTTACCCTT...............................................................................................................................................................................................................................................................................2011.001100000
.................................................................................................ATTGAGTT----TTT-CC-AGCTGATTG.............................................................................................................................................................................................................2211.001100000
...........CATTGAAT----------TATCTCATGTGATGACAATT.........................................................................................................................................................................................................................................................................................2811.001100000
................................................TTGTTACCCTTGCTAGAGTAAGTT..................................................................................................................................................................................................................................................................2411.001100000
....................................................................AGTTGATGAAGCTGCGACT...................................................................................................................................................................................................................................................1911.001100000
.........................................................TTGCTAGAGTAAGTTGATGAAGC..........................................................................................................................................................................................................................................................2311.001000100
.....................................................ACCCTTGCTAGAGTAAGTTGATGAA............................................................................................................................................................................................................................................................2511.001100000
.......................................................CCTTGCTAGAGTAAGTTGATGA.............................................................................................................................................................................................................................................................2211.001000001
.............................................................................................TGTGATTGAGTT----TTT-CC-AGC...................................................................................................................................................................................................................2011.001100000
.............................................................TAGAGTAAGTTGATGAAGCTGCGA.....................................................................................................................................................................................................................................................2411.001100000
..............................................................................GCTGCGACTTATCCATGTG.........................................................................................................................................................................................................................................1911.001100000
..............................................ATTTGTTACCCTTGCTAGAG........................................................................................................................................................................................................................................................................2011.001000001
.......................................................................................................................TGATTGCATTGAATGCGCGC...............................................................................................................................................................................................2011.001100000
..............................................................................GCTGCGACTTATCCATGTGATTGAGT..................................................................................................................................................................................................................................2611.001100000
..................................................................................................TTGAGTT----TTT-CC-AGCTGATTGC............................................................................................................................................................................................................2211.001100000
.........................................................................ATGAAGCTGCGACTTATCCATGT..........................................................................................................................................................................................................................................2311.001000001
........................................................................................................T----TTT-CC-AGCTGATTGCATTGAATGCGC.................................................................................................................................................................................................2711.001100000
.................................................................................................ATTGAGTT----TTT-CC-AGCTGATTGC............................................................................................................................................................................................................2311.001100000
.......................................................CCTTGCTAGAGTAAGTTGATGAA............................................................................................................................................................................................................................................................2311.001000001
.....................................................................................................AGTT----TTT-CC-AGCTGATTGCATT.........................................................................................................................................................................................................2211.001100000
......................................................................................................................................................................................................................................................................................AGGTTATTCGTCCATTTCTGCTGCGTC.........................2711.001000010
.............................................................................................................TTT-CC-AGCTGATTGCATTG........................................................................................................................................................................................................1911.001100000
.......................................................................................................TT----TTT-CC-AGCTGATTGCATT.........................................................................................................................................................................................................2011.001100000
......................................................................TTGATGAAGCTGCGACTTAT................................................................................................................................................................................................................................................2011.001100000
...............................................TTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2011.001100000
.....................................................................................................AGTT----TTT-CC-AGCTGATTGCAT..........................................................................................................................................................................................................2111.001100000
......................................................................................................GTT----TTT-CC-AGCTGATTGCA...........................................................................................................................................................................................................1911.001100000
........................................ATGACAATTTGTTACCCTTGC.............................................................................................................................................................................................................................................................................2111.001100000
..........................................................TGCTAGAGTAAGTTGATGAAGCT.........................................................................................................................................................................................................................................................2311.001100000
............................................................................................ATGTGATTGAGTT----TTT-CC-AGCT..................................................................................................................................................................................................................2211.001000001
..............TGAAT----------TATCTCATGTGATGA..............................................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................TGTGATTGAGTT----TTT-CC-AGCTGA................................................................................................................................................................................................................2311.001000001
.......................................GATGACAATTTGTTACCCTTGCTAGAGTA......................................................................................................................................................................................................................................................................2911.001100000
.............................................................TAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................2211.001000001
....................................................................................................................AGCTGATTGCATTGAATGCG..................................................................................................................................................................................................2011.001100000
..................T----------TATCTCATGTGATGACAATTT........................................................................................................................................................................................................................................................................................2211.001100000
.................................................................................................................................GAATGCGCGCTTTACATTACTT...................................................................................................................................................................................2211.001100000
..............................................................................................................TT-CC-AGCTGATTGCATTGAATGC...................................................................................................................................................................................................2311.001100000
.................................................................GTAAGTTGATGAAGCTGCGACTTAT................................................................................................................................................................................................................................................2511.001100000
..............................ATCTCATGTGATGACAATTTGTTACCC.................................................................................................................................................................................................................................................................................2711.001100000
............................................................CTAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................2311.001000001
...................................................................................................TGAGTT----TTT-CC-AGCTGATTGCAT..........................................................................................................................................................................................................2311.001000001
.....................................................................................................AGTT----TTT-CC-AGCTGATTGCATTGAATGC...................................................................................................................................................................................................2811.001100000
.........................................................................................................................ATTGCATTGAATGCGCGCTTTACATTA......................................................................................................................................................................................2711.001100000
......................................................................TTGATGAAGCTGCGACTTATCCATGT..........................................................................................................................................................................................................................................2611.001100000
...........................................................GCTAGAGTAAGTTGATGAAGCTGCG......................................................................................................................................................................................................................................................2511.001000001
..................................................................................................TTGAGTT----TTT-CC-AGCTGATTGCA...........................................................................................................................................................................................................2311.001100000
.....................................................................................CTTATCCATGTGATTGAGT..................................................................................................................................................................................................................................1911.001100000
droGri2
ACTCTGTGTCACATTGATTTTCAATAAC-AACCACATGTGATGACAATTTGTTAA-CTTGCTAAACTAAATCT--AAAGCTGCGACTTATCCATGTGATCGTGTC----CTTTCA-AAATTATCACATTGAATACGCGCTTTACACTCCT-TATTTAT-ATG-C-----------------ATTT-TGATG--TTGTTTTAAT------TT-G----AGC-AATCGTGTTAATCAA----------TT----A---TTGTTTTTAT------TTACATAGGTCATTCGTCCATTTTTGCTGCGACGCCTTAAAAAGGAGGTGGAGAAGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................GCTAAACTAAATCT--AAAGCTGCGA.....................................................................................................................................................................................................................................................2411.00110
...........................................................................................................................CACATTGAATACGCGCTTTACACTC......................................................................................................................................................................................2511.00110
...............................................................AACTAAATCT--AAAGCTGCGACTTAT................................................................................................................................................................................................................................................2511.00101
...........................................................................................................................CACATTGAATACGCGCTTTACACTCC.....................................................................................................................................................................................2611.00110
........................................................CTTGCTAAACTAAATCT--AAAGCTGCGACT...................................................................................................................................................................................................................................................2911.00101
...........................................................................................CATGTGATCGTGTC----CTTTC........................................................................................................................................................................................................................1911.00110
.......................................................................................................................................................................................................................................................................................................................AAAAGGAGGTGGAGAAGC.1811.00101
..........................AC-AACCACATGTGATGACAATT.........................................................................................................................................................................................................................................................................................2211.00110

Generated: 05/17/2015 at 10:46 PM