ID:

dya_539

 Coordinate:

2R:11163741-11163860 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.7 -6.5 -6.4

Flybase annnotation

CDS [Dyak\GM130-cds]; exon [dyak_GLEANR_13839:2]; exon [dyak_GLEANR_13839:3]; CDS [Dyak\GM130-cds]; intron [Dyak\GM130-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------##################################################
ACCAGCAACGCGCCAGCAACAACAATGGTCAGCCGGGAGCGGAGGAGCCGGTGGCTGCCACCACGCAATCGCACTCGTCCACGGTGAGCATAGCCAGCAATCTATCGGAGCGCTCAGACAGCGAAATAAATGTGAACGGTGGAGGCGCAGGCGGTACTCCGCAGCCCGAGCAGTCTGTCCTGCCCACAGCCGCTTCTTATTTTGCGCTAAACGAGCCGGA
******************************************************************..................(((((....((...........))...)))))...***************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V120
male body		 M043
female body
 M056
embryo
 M026
head
 V046
embryo
 V052
head
 V058
head
..........................GGTCAGCCGGGAGCGGAGGAGCCGGT........................................................................................................................................................................ 26 0 1 2.00 2 1 1 0 0 0 0 0
..............................AGCCGGGAGCGGAGGAGCC........................................................................................................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0 0
.....................................................................................................CTATCGGAGCGCTCAGAC..................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0
..................................................................AATCGCACTCGTCCACGGTGAGC................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................AGGCGGTACTCCGCAGCCCGAG.................................................. 22 0 1 1.00 1 0 0 0 0 0 0 1
.........................................................................................ATAGCCAGCAATCTATCGGAGCGCT.......................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
....................................................GGCTGCCACCACGCAATC...................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................ATAAATGTGAACGGTGGAG............................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................CACGCAATCGCACTCGTCCAC.......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................GAGCCGGTGGCTGCCACCACGCAATCG..................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................CGCTCAGACAGCGAAATAAATGT....................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................AGCCAGCAATCTATCGGAGCGCTC......................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0
........................ATGGTCAGCCGGGAGCGGAGGAGCCGGT........................................................................................................................................................................ 28 0 1 1.00 1 0 0 1 0 0 0 0
..................................................................................................AATCTATCGGAGCGCTCAGAC..................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.................AACAACAATGGTCAGCCGGGAGCGGA................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................CGTCCACGGTGAGCATAGCCAGC.......................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................GGAGGCGCAGGCGGTACTCCGCAGCCC..................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
........................ATGGTCAGCCGGGAGCGGAG................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0
................................................................GCAATCGCACTCGTCCACGGTGAGC................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................TTTGCGCTAAACGAGCCAGA 20 1 1 1.00 1 0 0 0 0 0 1 0
.................................................................CAATCGCACTCGTCCACGGTGAGC................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.................................CGGGAGCGGAGGAGCCGGTGGCTGC.................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0

Anti-sense strand reads

TGGTCGTTGCGCGGTCGTTGTTGTTACCAGTCGGCCCTCGCCTCCTCGGCCACCGACGGTGGTGCGTTAGCGTGAGCAGGTGCCACTCGTATCGGTCGTTAGATAGCCTCGCGAGTCTGTCGCTTTATTTACACTTGCCACCTCCGCGTCCGCCATGAGGCGTCGGGCTCGTCAGACAGGACGGGTGTCGGCGAAGAATAAAACGCGATTTGCTCGGCCT
*****************************************************************************************************..................(((((....((...........))...)))))...****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V058
head
........................................................................................................................................................................................TTGTCGGCGAAGATTAACAC................ 20 3 8 0.13 1 1 0
....................................................................................................................................................................................ACTGGTGTCGGCGAAGCGT..................... 19 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2R:11163691-11163910 + dya_539 ACCAGCAACGCGCCAGCAACAACAATGGTCAGCCGGGA------GC---GGAGGAGCCGGTGGCTGCCACCACG------CAATCGCACTCGTCCACGGTGAGCATAGCCAGCAATCTATCGGAGCGCTCAGACAGC------GAAATAAATGTGAACGGTG---------GAGGCGCA------GGCGGTAC---------TCCGCAGCCCGAG-C-----------A---------------GTCTGTC-----------------------------------CTG------CCCACAGCCGCTTCTTATTTTGCG----------------CTAAACGAGCC----GGA---------------
droEre2 scaffold_4845:12153313-12153532 - ACCAGCAGCGCGCCAGCAACAACAATGGTCAGCCGGGA------GC---GGAGGAGTCGGTGGCTGCCACCACA------CAATCGCCCTCGTCCACGGTGAGCATAGCCAGCAATCTGTCGGAGCGCTCAGATAGC------GAGATAAATGTGAACGGGG---------GAGGAGCA------GGCGGTAC---------TCCGCAGACCGAG-C-----------A---------------GTCTGTC-----------------------------------TTG------CCCACAGCCGCTTCTTATTTTGCG----------------CAAAACGAGTC----CGA---------------
droSec2 scaffold_9:1324934-1325088 - ACCAGCAGCGCGCCAGCAACAACAATGGGCAGCCTGGA------GC---TGAGGAGGCGGTGGCCGCCACCACG------CAATCGCACTCGTC-ACTGTGAGCATATCCAGCAATCTGTCGGAACGGTAAGACAGC------GAGATAAATGTGAACGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------CCAAACGAGTC----GGA---------------
droSim2 2r:18552019-18552238 - dsi_21971 ACCAGCAGCGCGCCAGCAACAACAATGGGCAGCCTGGA------GC---TGAGGAGCCGGTGGCCGCCACCACG------CAATCGCACTCGTCCACTGTGAGCATATCCAGCAATCTGTCGGAACGCTCAGACAGC------GAGATAAATGTGAACGTAG---------GAGGAGCA------GGTGGGAC---------TCAGCCGCCGGAG-C-----------A---------------GTCTGTC-----------------------------------CTG------CCCACACCCGCTTCTTATTTTGCC----------------CAAAACGAGTC----GGA---------------
dm3 chr2R:18014480-18014699 - ACCAGCAGCGCGCCAGCAACAACAATGGGCAGCCGGGA------GC---AGAGGAGCCGGTGGCTGCCACCACG------CAATCGCACTCGTCCACTGTGAGCATATCCAGCAATCTGTCGGAACGGTCAGACAGC------GAGATAAATGTGAACGGTG---------GAGGAGCA------GGTGGGAC---------GCAGCCGCCGGAG-C-----------A---------------GTCTGCC-----------------------------------CTG------CCCACAGCCGCTTCTTATTTTGCC----------------CAAAACGAGTC----GGA---------------
droEug1 scf7180000409663:13816-14035 - ACCAGCAGCGCGCCAGCAACAACAATGGCCACCCGGGA------GC---GGAGGAGCATGTGGCACCCACCCCA------CAATCGCACTCGTCCGCTGTCAGCATAGCTAGTAATCTTTCCGAGCGCTCAGACAGC------GAGATAAATGTGAACGGAG---------CAGGAGCC------GGCGGTCT---------TCAGCAACTGGAG-T-----------C---------------TTCCGTC-----------------------------------CCC------CTCACGGCTGCTTCCTACTTTTCC----------------CAAAACGAGCC----GGA---------------
droBia1 scf7180000301754:5154557-5154776 - ACCAGCAGCGCGCCAGCAACAACAATGGCCCCGCGGGG------AC---GGAGGAGCCGGTGGCCCCCGCCACG------CAGTCGCACTCGTCCACGGTCAGCATTGCCAGCAATCTTTCCGAGCGCTCCGACAGC------GAGATAAACGTGAACGGCG---------GAGGAGCC------GGTGGCCT---------CCAGCAGCAGGAG-C-----------A---------------GCCGGTC-----------------------------------CAG------CCCACTGTGGCCTCCTACTTCGCC----------------CACACCGAACC----GGA---------------
droTak1 scf7180000415243:176857-177070 - ACCAGCAGCGCGCGAGCAACAACAATGGCCACCCGGGA------GT---GGAGGAGCCGCTGGCCACCGCCACG------CAGTCGCACTCGTCTACTGTAAGCATTGCGAGCAATCTTTCCGAGCGTTCCGACAGC------GAGGTGAATGTAAATGGAG---------GAGGAACT------GGTGGTC---------------AGCAGGAG-C-----------A---------------GTTTGCC-----------------------------------CAT------CCCACAGCTGCTTCCTACTTTGCC----------------CACACCGAACC----AGA---------------
droEle1 scf7180000491211:439794-440013 - ACCAGCAGCGGGCCAGCAACAACAATAGCCAGCAGGGA------GC---GGAGGAGCCGGTGGCCTCCACCACG------CAATCGCCCTCGTCCACAGTTAGCATAGCCAGCAACCTGTCCGAGCGCTCCGACAGC------GAGCTAAATGTAAACGGAG---------GGGGAGCC------GTTGCTCC---------TTTGCAGCAGGAA-C-----------A---------------GTTCGTC-----------------------------------CTG------CCCACAGCCGCCTCCTATTTCACC----------------CAAAACGAGCC----GGA---------------
droRho1 scf7180000758468:7943-8162 + ACCAGGAGCGGGCCAGCAACAACAACGGCCAGCCGGGG------GC---GGAGGAGCTGGTGGCCACCACCACG------CAATCGCACTCGTCCACAGTTAGCATAGCCAGTAATCTGTCGGAGCGCTCCGACAGC------GAGCTAAATGTGAATGGAG---------TTGGAGCC------GGTGGTTC---------ACAACAGCAGGAA-C-----------C---------------TTCCGTC-----------------------------------TTG------CCCACAGCCGCTTCCTATTTTACC----------------CAAAACGAGCC----GGA---------------
droFic1 scf7180000453858:452312-452531 - ACCAGCAGCGGGCCAGCAACAACAATGGGCAGCCGGGA------AC---GGAGGAACCGGTGGCCCCCACCACG------CAATCGCACTCGTCCACAGTTAGCATAGCCAGTAATCTGTCCGAGCGCTCTGACAGC------GAGTTGAACGTGAACGGCG---------GAGGAACG------GGAGTCCA---------TCAGCAGCAGGAA-C-----------A---------------GTTCGTC-----------------------------------CTG------CCCACAGCCGCTTCATATTTCACA----------------CAAAATGAGCC----GGA---------------
droKik1 scf7180000302232:68499-68736 + ACCAGCAGCGCAACAACAACAATAATGGACAGTCGGGAGCCGCAGCAGCCGAGGAGGCGGTGTC---------GCAATCGCACTCGCACTCCTCCACCGTCAGCATAGCCAGCAACTTGTCCGAGCGCTCCGACAGC------GAGCCAAATGTGAATGGCAGCGGTGGA------TCCGGTATTGTTGGCTT---------TCAGCAGCCGGAT-C-----------C---------------ACCCG--------------------------------CAGTCCTG------CCCACAGCGGCATCTTTTTTCACC----------------CAGAGCGAGCC----GGA---------------
droAna3 scaffold_13266:11377640-11377871 - ACCAGCTGCGCA---ACAACAACAACAGTCACCCGGCG------TC---TGAGGAGCCGCTGCCC------------------TCGTACTCGTCCACTGTCAGCATAGCTAGCAACTTGTCGGAACGGTCCGACTGT------GAGACGAGTCTCAATGGCGCTGCTGGAGCCGGAACC------GGCAGTTT---------GCCGGCACAGGAG-C-----------A---------------GACAGCT-----------------------------------GTG------CCCACAGCCGCTTCCTTTTTCCCA----------------CACAACCAGG-AACCAGACTTGCCACTGGCAGC
droBip1 scf7180000396547:1087278-1087509 + ACCAGCTGCGCA---ACAACAACAACAGCCATCCGGCG------TC---CGAGGAGCCCCTGCCC------------------TCGCACTCGTCCACGGTCAGCATAGCCAGCAACTTGTCGGAACGCTCCGACTGT------GAGACTAGTACCAATGGAGCTGCTGGAGCCGGAGCC------GGCAATTT---------GCCACCACAGGAG-C-----------A---------------AACAGCT-----------------------------------GTG------CCCACAGCCGCCTCGTTTTTCACA----------------CACAACCAGG-AACCAGACATACCACTGTCCAC
dp5 3:19343256-19343490 + dps_1320 ACCAACAGCGCAACAACAA---CCAT------GCCGGA------GG---AGATGAGCAGGTGCAAACG------------GGCACCCACTCCTCCACCGTCAGCATCGCCAGCAACTTGTCCGAGCGTTCCGACAGC------GAGGTGAATGTGAATGAAAATGGGGGAGGAGGTTCC------AGCAGTCTGCATGTCCGGCAGCAGTCGGAGG-AGGCTGTTT--CCCTG------G-----------------------------------------CAGCCTTGCCCACCCCCACGGCAGCTGCGCTCTTTACG----------------C------AGCC----AGA---------------
droPer2 scaffold_37:343370-343604 + ACCAACAGCGCAACAACAA---CCAT------GCCGGA------GG---AGATGAGCAGGCGCAAACG------------GGCACCCACTCCTCCACCGTCAGCATCGCCAGCAACTTGTCCGAGCGTTCCGACAGC------GAGGTGAATGTGAATGAAAATGGGGGAGGAGGTTCC------AGCAGTCTGCATGTCCGGCAGCAGTCGGAGG-AGGCTGTTT--CCCTG------G-----------------------------------------CAGCCTTGCCCACCCCCACGGCAGCTGCGCTCTTTACG----------------C------AGCC----AGA---------------
droWil2 scf2_1100000004513:4885340-4885535 + ACCAACAGCGAAATAATAACAATAGCAACACATCCCAT------AC---GGAGG---------------------------------------------CGGCTTCAGCTGGCAACTTGTTGGAGCATCCGACCCACCCACCAGAGACGAATGTAAATGGATCACCCGGAGA-GGAA--------------------------------------------------------GGGCAGGCACCGATAGCCACCACTACTGCGGTAGGCTTGACGCCAGAC-----C---------CTGAAGACATTGCTCGTATTGC--------------------------------TGC---------------
droVir3 scaffold_12875:11665590-11665809 - ATCAGCAGCGTAACAACAACAACAATGAT------------------------GAAAACGTCGGTACT------------AACACCCATTCGTCGACAGTGAGCATAGCCAGCAATTTGTCGGAACGTTCCGACTGT------GATTTAAGCTCAAGCAATGGCGGCGGA---------------------CC---------GCAGC----------ACACGCTGGAG-----CAGCACACAACGCCAGCC-----------------------------------CCA------ACCGGAGTGGCTGCATATTTTTCACAACAGACAGTACCG-CTCATAGAGCC----GGA---------------
droMoj3 scaffold_6496:15202941-15203179 + ACCAGCAACGCAACAACAACAACATTGA------------------------GGAGAACATTGGCACT------------AACACCAATTCGTCAACAGTAAGCATTGCCAGCAATTTATCCGAACGCTCCGATTGC------GAATTAAGCTCGAGCAATGGCGTCGGC------AGC------GGCAGCGG-----AGC-GGCGCAGTCGCAGC-AAACAGTGG--AGCAG------ACAATGCCAGCA-----------------------------------ATG------CCCTCGGCAGCTGCGTATTTTTCCGAGAAGCCGATGCCGACAATACAGCCA----GAA---------------
droGri2 scaffold_15245:6562010-6562244 + ATCAGCAGCGCACCAACAACAACAATA---------------------------------------------TG------GATGAACACTCATCAACGGTGAGCATCGCCAGCAATTTATCAGAGCGTTCCGACTGT------GAGTTAAGCCTGAGCAACGGCGCCGGA------ATC------GGAATCCA---------GGCACAACAGC----AGATGCCGGAG-----CAACAAATCGTGACAGCAACTGCAGCTGCAGCACCGCTCGAACCAAAT-----CCA------ACTGGAATCGCTGCTTATTTTGCA----------------CAGCCCGAACC----GAC---------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
ACCAGCAACGCGCCAGCAACAACAATGGTCAGCCGGGA------GC---GGAGGAGCCGGTGGCTGCCACCACG------CAATCGCACTCGTCCACGGTGAGCATAGCCAGCAATCTATCGGAGCGCTCAGACAGC------GAAATAAATGTGAACGGTG---------GAGGCGCA------GGCGGTAC---------TCCGCAGCCCGAG-C-----------A---------------GTCTGTC-----------------------------------CTG------CCCACAGCCGCTTCTTATTTTGCG----------------CTAAACGAGCC----GGA---------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................GGTCAGCCGGGA------GC---GGAGGAGCCGGT...................................................................................................................................................................................................................................................................................................................2612.00201000010000
..............................AGCCGGGA------GC---GGAGGAGCC......................................................................................................................................................................................................................................................................................................................1912.00200200000000
....................................................................................................................CTATCGGAGCGCTCAGAC..........................................................................................................................................................................................................................................1811.00110000000000
.................................................................................AATCGCACTCGTCCACGGTGAGC........................................................................................................................................................................................................................................................................2311.00100000010000
..................................................................................................................................................................................A------GGCGGTAC---------TCCGCAGCCCGAG-........................................................................................................................................................2211.00100000100000
........................................................................................................ATAGCCAGCAATCTATCGGAGCGCT...............................................................................................................................................................................................................................................2511.00100000010000
.............................................................GGCTGCCACCACG------CAATC...........................................................................................................................................................................................................................................................................................1811.00101000000000
..................................................................................................................................................ATAAATGTGAACGGTG---------GAG..................................................................................................................................................................................................1911.00100000010000
......................................................................CACG------CAATCGCACTCGTCCAC...............................................................................................................................................................................................................................................................................2111.00100000010000
.....................................................GAGCCGGTGGCTGCCACCACG------CAATCG..........................................................................................................................................................................................................................................................................................2711.00100000010000
.............................................................................................................................CGCTCAGACAGC------GAAATAAATGT......................................................................................................................................................................................................................2311.00101000000000
..........................................................................................................AGCCAGCAATCTATCGGAGCGCTC..............................................................................................................................................................................................................................................2411.00100010000000
........................ATGGTCAGCCGGGA------GC---GGAGGAGCCGGT...................................................................................................................................................................................................................................................................................................................2811.00100100000000
.................................................................................................................AATCTATCGGAGCGCTCAGAC..........................................................................................................................................................................................................................................2111.00101000000000
.................AACAACAATGGTCAGCCGGGA------GC---GGA............................................................................................................................................................................................................................................................................................................................2611.00100000010000
..........................................................................................CGTCCACGGTGAGCATAGCCAGC...............................................................................................................................................................................................................................................................2311.00100000010000
.................................................................................................................................................................G---------GAGGCGCA------GGCGGTAC---------TCCGCAGCCC............................................................................................................................................................2711.00101000000000
........................ATGGTCAGCCGGGA------GC---GGAG...........................................................................................................................................................................................................................................................................................................................2011.00100100000000
.........................................................................G------CAATCGCACTCGTCCACGGTGAGC........................................................................................................................................................................................................................................................................2511.00100000010000
................................................................................CAATCGCACTCGTCCACGGTGAGC........................................................................................................................................................................................................................................................................2411.00100000010000
.................................CGGGA------GC---GGAGGAGCCGGTGGCTGC.............................................................................................................................................................................................................................................................................................................2511.00100000010000
droEre2
ACCAGCAGCGCGCCAGCAACAACAATGGTCAGCCGGGA------GC---GGAGGAGTCGGTGGCTGCCACCACA------CAATCGCCCTCGTCCACGGTGAGCATAGCCAGCAATCTGTCGGAGCGCTCAGATAGC------GAGATAAATGTGAACGGGG---------GAGGAGCA------GGCGGTAC---------TCCGCAGACCGAG-C-----------A---------------GTCTGTC-----------------------------------TTG------CCCACAGCCGCTTCTTATTTTGCG----------------CAAAACGAGTC----CGA---------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................ATAGCCAGCAATCTGTCGGA....................................................................................................................................................................................................................................................2012.0021000100
..........................................................................................................................................................GAACGGGG---------GAGGAGCA------GG.....................................................................................................................................................................................1811.0010000100
..................................................................................................................ATCTGTCGGAGCGCTCAGATAGC------GAG..............................................................................................................................................................................................................................2611.0010000100
........................................................................CA------CAATCGCCCTCGTCCACGGTG...........................................................................................................................................................................................................................................................................2311.0010000010
........................................................................................................ATAGCCAGCAATCTGTCGGAG...................................................................................................................................................................................................................................................2111.0011000000
..................................................................................................................................AGATAGC------GAGATAAATGTGAAC..................................................................................................................................................................................................................2211.0011000000
...............GCAACAACAATGGTCAGCCGGGA------GC---GGA............................................................................................................................................................................................................................................................................................................................2811.0011000000
.......................................................................................CCTCGTCCACGGTGAGCATAGCCAGC...............................................................................................................................................................................................................................................................2611.0011000000
.........................................................................................................TAGCCAGCAATCTGTCGGAGC..................................................................................................................................................................................................................................................2111.0010000100
droSec2
ACCAGCAGCGCGCCAGCAACAACAATGGGCAGCCTGGA------GC---TGAGGAGGCGGTGGCCGCCACCACG------CAATCGCACTCGTC-ACTGTGAGCATATCCAGCAATCTGTCGGAACGGTAAGACAGC------GAGATAAATGTGAACGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------CCAAACGAGTC----GGA---------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................ATATCCAGCAATCTGTCG......................................................................................................................................................................................................................................................1812.0020020
......................................................................................................................................AGC------GAGATAAATGTGAACGGA...............................................................................................................................................................................................................2111.0010010
.......GCGCGCCAGCAACAACAATGGG...................................................................................................................................................................................................................................................................................................................................................2211.0011000
.................AACAACAATGGGCAGCCTGGA------GC---TGA............................................................................................................................................................................................................................................................................................................................2611.0010100
...............GCAACAACAATGGGCAGCCTGGA------GC---TGA............................................................................................................................................................................................................................................................................................................................2811.0010010
........................................................................................................ATATCCAGCAATCTGTCGGAAC..................................................................................................................................................................................................................................................2211.0011000
droSim2
ACCAGCAGCGCGCCAGCAACAACAATGGGCAGCCTGGA------GC---TGAGGAGCCGGTGGCCGCCACCACG------CAATCGCACTCGTCCACTGTGAGCATATCCAGCAATCTGTCGGAACGCTCAGACAGC------GAGATAAATGTGAACGTAG---------GAGGAGCA------GGTGGGAC---------TCAGCCGCCGGAG-C-----------A---------------GTCTGTC-----------------------------------CTG------CCCACACCCGCTTCTTATTTTGCC----------------CAAAACGAGTC----GGA---------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................ATATCCAGCAATCTGTCGGAACGCT...............................................................................................................................................................................................................................................2514.00400400000000000000
............................................................................................................................................................................................................AGCCGCCGGAG-C-----------A---------------GTCTGT......................................................................................................................1912.00200200000000000000
.................................................................................AATCGCACTCGTCCACTGTG...........................................................................................................................................................................................................................................................................2011.00101000000000000000
..................................................................................ATCGCACTCGTCCACTGTGAGC........................................................................................................................................................................................................................................................................2211.00101000000000000000
........................ATGGGCAGCCTGGA------GC---TGAGGAGCCGGT...................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
...............................................................................................................................................................................................AC---------TCAGCCGCCGGAG-C-----------A---------------GT..........................................................................................................................1911.00100000000000100000
........................................................................................................ATATCCAGCAATCTGTCGGAAC..................................................................................................................................................................................................................................................2211.00100100000000000000
........................................................................................CTCGTCCACTGTGAGCATATCCAGCAAT............................................................................................................................................................................................................................................................2811.00100000000000001000
.........................................................................................................TATCCAGCAATCTGTCGGAACGCT...............................................................................................................................................................................................................................................2411.00100010000000000000
.................................................................................................TGTGAGCATATCCAGCAATCTGTCGGAA...................................................................................................................................................................................................................................................2811.00100000000100000000
..............................................................................................................................................................................................GAC---------TCAGCCGCCGGAG-C-----------A---------------GTCTGTC-----------------------------------CTG------.........................................................................2811.00110000000000000000
............................................................................................................CCAGCAATCTGTCGGAACGC................................................................................................................................................................................................................................................2011.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................TTTGCC----------------CAAAACGAGTC----GGA---------------2011.00100100000000000000
......................................................................CACG------CAATCGCACTCGTCCACTGTGAGC........................................................................................................................................................................................................................................................................2811.00101000000000000000
.......................................................................................................CATATCCAGCAATCTGTCGGA....................................................................................................................................................................................................................................................2111.00100100000000000000
dm3
ACCAGCAGCGCGCCAGCAACAACAATGGGCAGCCGGGA------GC---AGAGGAGCCGGTGGCTGCCACCACG------CAATCGCACTCGTCCACTGTGAGCATATCCAGCAATCTGTCGGAACGGTCAGACAGC------GAGATAAATGTGAACGGTG---------GAGGAGCA------GGTGGGAC---------GCAGCCGCCGGAG-C-----------A---------------GTCTGCC-----------------------------------CTG------CCCACAGCCGCTTCTTATTTTGCC----------------CAAAACGAGTC----GGA---------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................AATGGGCAGCCGGGA------GC---AGAGGAGCCGGT...................................................................................................................................................................................................................................................................................................................2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................GAGCA------GGTGGGAC---------GCAGCCGCCG............................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AGACAGC------GAGATAAATGTGAA...................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CGGGA------GC---AGAGGAGCCGGTG..................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................A------GGTGGGAC---------GCAGCCGCCGGAG-C-----------............................................................................................................................................2312.0020000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CGGAACGGTCAGACAGC------GAGATA...........................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................CAGCCGCCGGAG-C-----------A---------------GTCTGCC-----------------------------------..................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CTGTCGGAACGGTCAGACA.........................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000
.................................................AGAGGAGCCGGTGGCTGCCACC.........................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........GCCAGCAACAACAATGGGC..................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................AGGAGCA------GGTGGGAC---------GCAGCCGCC.............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................GTCGGAACGGTCAGACAC........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................GAGATAAATGTGAACGGTG---------GAGGAGCA------G......................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................AGCCGCCGGAG-C-----------A---------------GTCTGCC-----------------------------------CTG------CCCAC....................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................AAATGTGAACGGTG---------GAGGAGC..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................AATGTGAACGGTG---------GAGGAGCA------.......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................AATCTGTCGGAACGGTCAGACAGC------.................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................CTCGTCCACTGTGAGCATATCCAGCA..............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.................................CGGGA------GC---AGAGGAGCCGGTGGCTGC.............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................CGCACTCGTCCACTGTGAGC........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................AATGGGCAGCCGGGA------GC---...............................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GAGGAGCCGGTGGCTGCCACC.........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................ATCGCACTCGTCCACTGTGAGCAT......................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................AGGAGCCGGTGGCTGCCACCA........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................A------GC---AGAGGAGCCGGTGGCTGCCA...........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CACG------CAATCGCACTCGTC..................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................GAGGAGCA------GGTGGGAC---------GCAGCC................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AATGGGCAGCCGGGA------GC---AGAG...........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TGTGAGCATATCCAGCAAT............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................GAGGAGCA------GGTGGGAC---------GCAGC.................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................TAAATGTGAACGGTG---------GAG..................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................ACTGTGAGCATATCCAGCA..............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................AGC------GAGATAAATGTGAACGG................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................GAGGAGCA------GGTGGGAC---------GCAGCCGCC.............................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................AGAGGAGCCGGTGGCTGCCAC..........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TAAATGTGAACGGTG---------GAGGAGCA------GGTG...................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................TCAGACAGC------GAGATAAATGTG.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................GTCGGAACGGTCAGACAGC------GAGAT............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................GAC---------GCAGCCGCCGGAG-C-----------A---------------GTCTGCC-----------------------------------..................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TCAGACAGC------GAGATAAATGTGAACGG................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................AGCA------GGTGGGAC---------GCAGCCGCCGGA..........................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................GGAACGGTCAGACAGC------GAGAT............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................ACAGC------GAGATAAATGTGAAC..................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................AGCA------GGTGGGAC---------GCAGCCGCC.............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AGCCGGGA------GC---AGAGGAGCCGGTGGC................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................ATATCCAGCAATCTGTCGGAACGGTCA.............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................ATATCCAGCAATCTGTCGGAACGGTC..............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................C---------GCAGCCGCCGGAG-C-----------A---------------GT..........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................A------GC---AGAGGAGCCGGTGGC................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................GGAGCA------GGTGGGAC---------GCAGCC................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................ATCTGTCGGAACGGTCAGA...........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................GCAGCCGGGA------GC---AGAGGAGCC......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GCCACCACG------CAATCGCACTCGTCC.................................................................................................................................................................................................................................................................................2411.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................AGAGGAGCCGGTGGCTGCCACCA........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................GGAGCCGGTGGCTGCCACCACG------................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................TCTGTCGGAACGGTCAGACAGC------.................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CG------CAATCGCACTCGTCCACTGTGAGC........................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................GGGCAGCCGGGA------GC---AGAGGA.........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
droEug1
ACCAGCAGCGCGCCAGCAACAACAATGGCCACCCGGGA------GC---GGAGGAGCATGTGGCACCCACCCCA------CAATCGCACTCGTCCGCTGTCAGCATAGCTAGTAATCTTTCCGAGCGCTCAGACAGC------GAGATAAATGTGAACGGAG---------CAGGAGCC------GGCGGTCT---------TCAGCAACTGGAG-T-----------C---------------TTCCGTC-----------------------------------CCC------CTCACGGCTGCTTCCTACTTTTCC----------------CAAAACGAGCC----GGA---------------SizeHit CountTotal NormTotal
No Reads
droBia1
ACCAGCAGCGCGCCAGCAACAACAATGGCCCCGCGGGG------AC---GGAGGAGCCGGTGGCCCCCGCCACG------CAGTCGCACTCGTCCACGGTCAGCATTGCCAGCAATCTTTCCGAGCGCTCCGACAGC------GAGATAAACGTGAACGGCG---------GAGGAGCC------GGTGGCCT---------CCAGCAGCAGGAG-C-----------A---------------GCCGGTC-----------------------------------CAG------CCCACTGTGGCCTCCTACTTCGCC----------------CACACCGAACC----GGA---------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACCAGCAGCGCGCGAGCAACAACAATGGCCACCCGGGA------GT---GGAGGAGCCGCTGGCCACCGCCACG------CAGTCGCACTCGTCTACTGTAAGCATTGCGAGCAATCTTTCCGAGCGTTCCGACAGC------GAGGTGAATGTAAATGGAG---------GAGGAACT------GGTGGTC---------------AGCAGGAG-C-----------A---------------GTTTGCC-----------------------------------CAT------CCCACAGCTGCTTCCTACTTTGCC----------------CACACCGAACC----AGA---------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACCAGCAGCGGGCCAGCAACAACAATAGCCAGCAGGGA------GC---GGAGGAGCCGGTGGCCTCCACCACG------CAATCGCCCTCGTCCACAGTTAGCATAGCCAGCAACCTGTCCGAGCGCTCCGACAGC------GAGCTAAATGTAAACGGAG---------GGGGAGCC------GTTGCTCC---------TTTGCAGCAGGAA-C-----------A---------------GTTCGTC-----------------------------------CTG------CCCACAGCCGCCTCCTATTTCACC----------------CAAAACGAGCC----GGA---------------SizeHit CountTotal NormTotal
No Reads
droRho1
ACCAGGAGCGGGCCAGCAACAACAACGGCCAGCCGGGG------GC---GGAGGAGCTGGTGGCCACCACCACG------CAATCGCACTCGTCCACAGTTAGCATAGCCAGTAATCTGTCGGAGCGCTCCGACAGC------GAGCTAAATGTGAATGGAG---------TTGGAGCC------GGTGGTTC---------ACAACAGCAGGAA-C-----------C---------------TTCCGTC-----------------------------------TTG------CCCACAGCCGCTTCCTATTTTACC----------------CAAAACGAGCC----GGA---------------SizeHit CountTotal NormTotal
No Reads
droFic1
ACCAGCAGCGGGCCAGCAACAACAATGGGCAGCCGGGA------AC---GGAGGAACCGGTGGCCCCCACCACG------CAATCGCACTCGTCCACAGTTAGCATAGCCAGTAATCTGTCCGAGCGCTCTGACAGC------GAGTTGAACGTGAACGGCG---------GAGGAACG------GGAGTCCA---------TCAGCAGCAGGAA-C-----------A---------------GTTCGTC-----------------------------------CTG------CCCACAGCCGCTTCATATTTCACA----------------CAAAATGAGCC----GGA---------------SizeHit CountTotal NormTotal
No Reads
droKik1
ACCAGCAGCGCAACAACAACAATAATGGACAGTCGGGAGCCGCAGCAGCCGAGGAGGCGGTGTC---------GCAATCGCACTCGCACTCCTCCACCGTCAGCATAGCCAGCAACTTGTCCGAGCGCTCCGACAGC------GAGCCAAATGTGAATGGCAGCGGTGGA------TCCGGTATTGTTGGCTT---------TCAGCAGCCGGAT-C-----------C---------------ACCCG--------------------------------CAGTCCTG------CCCACAGCGGCATCTTTTTTCACC----------------CAGAGCGAGCC----GGA---------------SizeHit CountTotal NormTotal
No Reads
droAna3
ACCAGCTGCGCA---ACAACAACAACAGTCACCCGGCG------TC---TGAGGAGCCGCTGCCC------------------TCGTACTCGTCCACTGTCAGCATAGCTAGCAACTTGTCGGAACGGTCCGACTGT------GAGACGAGTCTCAATGGCGCTGCTGGAGCCGGAACC------GGCAGTTT---------GCCGGCACAGGAG-C-----------A---------------GACAGCT-----------------------------------GTG------CCCACAGCCGCTTCCTTTTTCCCA----------------CACAACCAGG-AACCAGACTTGCCACTGGCAGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................CACAGCCGCTTCCTTTTTCCC..................................................2111.001010000
....................AACAACAGTCACCCGGCG------TC---TGAGGAGC.......................................................................................................................................................................................................................................................................................................................2811.001100000
..............................................................................................................................................................................................TTT---------GCCGGCACAGGAG-C-----------A---------------GACAGCT-----------------------------------GT................................................................................2711.001001000
.......................................................................................................CATAGCTAGCAACTTGTCGG.....................................................................................................................................................................................................................................................2011.001000010
..........................................................................................................AGCTAGCAACTTGTCGGAACGGT...............................................................................................................................................................................................................................................2311.001000010
..............................................................................................................................................................GGCGCTGCTGGAGCCGGAACC------.......................................................................................................................................................................................2111.001100000
.............................................................................................................................................................TGGCGCTGCTGGAGCCGGA................................................................................................................................................................................................1911.001100000
..............................................................................................................AGCAACTTGTCGGAACGGTCCGACT.........................................................................................................................................................................................................................................2511.001000100
...........................................................................................................................AACGGTCCGACTGT------GAGACGA..........................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................AGTTT---------GCCGGCACAGGAG-C-----------............................................................................................................................................1911.001010000
droBip1
ACCAGCTGCGCA---ACAACAACAACAGCCATCCGGCG------TC---CGAGGAGCCCCTGCCC------------------TCGCACTCGTCCACGGTCAGCATAGCCAGCAACTTGTCGGAACGCTCCGACTGT------GAGACTAGTACCAATGGAGCTGCTGGAGCCGGAGCC------GGCAATTT---------GCCACCACAGGAG-C-----------A---------------AACAGCT-----------------------------------GTG------CCCACAGCCGCCTCGTTTTTCACA----------------CACAACCAGG-AACCAGACATACCACTGTCCACSizeHit CountTotal NormTotal
No Reads
dp5
ACCAACAGCGCAACAACAA---CCAT------GCCGGA------GG---AGATGAGCAGGTGCAAACG------------GGCACCCACTCCTCCACCGTCAGCATCGCCAGCAACTTGTCCGAGCGTTCCGACAGC------GAGGTGAATGTGAATGAAAATGGGGGAGGAGGTTCC------AGCAGTCTGCATGTCCGGCAGCAGTCGGAGG-AGGCTGTTT--CCCTG------G-----------------------------------------CAGCCTTGCCCACCCCCACGGCAGCTGCGCTCTTTACG----------------C------AGCC----AGA---------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................GGA------GG---AGATGAGCAGGTGC.................................................................................................................................................................................................................................................................................................................1912.0020200000000
.............................................................................................CCACCGTCAGCATCGCCAGCAACTT..........................................................................................................................................................................................................................................................2512.0020200000000
................................................................................................................................TCCGACAGC------GAGGTGAATGTGAATGAAA..............................................................................................................................................................................................................2811.0010000001000
.....................................A------GG---AGATGAGCAGGTGCAAA..............................................................................................................................................................................................................................................................................................................2011.0010000000010
.........GCAACAACAA---CCAT------GCCGGA------GG---A..............................................................................................................................................................................................................................................................................................................................2311.0010100000000
............ACAACAA---CCAT------GCCGGA------GG---...............................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......GCGCAACAACAA---CCAT------GCCGGA------GG---...............................................................................................................................................................................................................................................................................................................................2411.0010100000000
..................................................................................................................................CGACAGC------GAGGTGAATGTGAATG.................................................................................................................................................................................................................2311.0010100000000
..........................................................................................................................................................................................................GCAGCAGTCGGAGG-AGGC...................................................................................................................................................1811.0010010000000
.......GCGCAACAACAA---CCAT------GCCGGA------GG---A..............................................................................................................................................................................................................................................................................................................................2511.0010100000000
.................................................................................................................AACTTGTCCGAGCGTTCCGAC..........................................................................................................................................................................................................................................2111.0010010000000
..............................................................................................CACCGTCAGCATCGCCAGCA..............................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................GAGCGTTCCGACAGC------GAGGTG...........................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................CGAGCGTTCCGACAGC------GAGGT............................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................AGCAGTCTGCATGTCCGGC....................................................................................................................................................................1911.0010000000010
..............................................................................................CACCGTCAGCATCGCCAGC...............................................................................................................................................................................................................................................................1911.0010100000000
droPer2
ACCAACAGCGCAACAACAA---CCAT------GCCGGA------GG---AGATGAGCAGGCGCAAACG------------GGCACCCACTCCTCCACCGTCAGCATCGCCAGCAACTTGTCCGAGCGTTCCGACAGC------GAGGTGAATGTGAATGAAAATGGGGGAGGAGGTTCC------AGCAGTCTGCATGTCCGGCAGCAGTCGGAGG-AGGCTGTTT--CCCTG------G-----------------------------------------CAGCCTTGCCCACCCCCACGGCAGCTGCGCTCTTTACG----------------C------AGCC----AGA---------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................TTCCGACAGC------GAGGTGAATGTGAA...................................................................................................................................................................................................................2411.001000001
...........................................................................................................................................................................GAGGTTCC------AGCAGTCTGC.............................................................................................................................................................................1811.001001000
..........................................................................................................................................................GAATGAAAATGGGGGAGGAG..................................................................................................................................................................................................2011.001000001
...........................................................................................CTCCACCGTCAGCATCGCCAGCAACTT..........................................................................................................................................................................................................................................................2711.001100000
droWil2
ACCAACAGCGAAATAATAACAATAGCAACACATCCCAT------AC---GGAGG---------------------------------------------CGGCTTCAGCTGGCAACTTGTTGGAGCATCCGACCCACCCACCAGAGACGAATGTAAATGGATCACCCGGAGA-GGAA--------------------------------------------------------GGGCAGGCACCGATAGCCACCACTACTGCGGTAGGCTTGACGCCAGAC-----C---------CTGAAGACATTGCTCGTATTGC--------------------------------TGC---------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................GTAGGCTTGACGCCAGAC-----C---------........................................................................1912.00220000
..............................................................................................................................................................................................................................................................................TGACGCCAGAC-----C---------CTGAAGACATTGCT..........................................................2612.00220000
.............................................................................................................................................................TGGATCACCCGGAGA-GGAA--------------------------------------------------------GGGC...................................................................................................................................2311.00100010
...................................................................................................................................................................................................................................................................................CCAGAC-----C---------CTGAAGACATTGCTCGTATT....................................................2711.00100010
...............................................................................................................................................................GATCACCCGGAGA-GGAA--------------------------------------------------------GGGC...................................................................................................................................2111.00100100
..................................................................................................................................................................................................................................................................................GCCAGAC-----C---------CTGAAGACATTGCTC.........................................................2311.00100100
............................................................................................................................................................ATGGATCACCCGGAGA-GGAA--------------------------------------------------------GG.....................................................................................................................................2211.00100010
...................................................................................................................................................................ACCCGGAGA-GGAA--------------------------------------------------------GGGCAGGC...............................................................................................................................2111.00100010
..............................................................................................................................................................GGATCACCCGGAGA-GGAA--------------------------------------------------------GGGCA..................................................................................................................................2311.00100100
.......................................................................................................TTCAGCTGGCAACTTGTTGGAGC..................................................................................................................................................................................................................................................2311.00100010
.....................ATAGCAACACATCCCAT------AC---GGAGG---------------------------------------------C............................................................................................................................................................................................................................................................................2511.00100010
..............................................................................................................................................................GGATCACCCGGAGA-GGAA--------------------------------------------------------GGGC...................................................................................................................................2211.00100100
droVir3
ATCAGCAGCGTAACAACAACAACAATGAT------------------------GAAAACGTCGGTACT------------AACACCCATTCGTCGACAGTGAGCATAGCCAGCAATTTGTCGGAACGTTCCGACTGT------GATTTAAGCTCAAGCAATGGCGGCGGA---------------------CC---------GCAGC----------ACACGCTGGAG-----CAGCACACAACGCCAGCC-----------------------------------CCA------ACCGGAGTGGCTGCATATTTTTCACAACAGACAGTACCG-CTCATAGAGCC----GGA---------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................AATGAT------------------------GAAAACGTCGGTACT------------AA..............................................................................................................................................................................................................................................................................................2312.002000000000000000000000000000000200000000000000000000000000000000
........................................................................................................................CGGAACGTTCCGACTGT------GA...............................................................................................................................................................................................................................1911.001000000000100000000000000000000000000000000000000000000000000000
................................................................................AACACCCATTCGTCGACAGTGA..........................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................AAGCAATGGCGGCGGA---------------------CC---------GCA...................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
ATCAGCAGCGTAACAACAACAACA........................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................AATTTGTCGGAACGTTCC.............................................................................................................................................................................................................................................1811.001000001000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CACAACAGACAGTACCG-CTC..............................2011.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................CATTCGTCGACAGTGAGCATAGCCAG................................................................................................................................................................................................................................................................2611.001000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................GGA---------------------CC---------GCAGC----------ACACGCTGGAG-----C......................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.TCAGCAGCGTAACAACAACAACAA.......................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................GGAACGTTCCGACTGT------GATTTAAGC........................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................ACAGTACCG-CTCATAGAGCC----GGA---------------2311.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GCTGCATATTTTTCACAACAGACAGT......................................2611.001000000000000000000000000000000010000000000000000000000000000000
.................................................................ACT------------AACACCCATTCGTCGACAGT............................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000010000000000000000000000000
..............................................................................................GACAGTGAGCATAGCCAGC...............................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................GA---------------------CC---------GCAGC----------ACACGCTGGAG-----C......................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
...AGCAGCGTAACAACAACAACA........................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
..................................................................CT------------AACACCCATTCGTCGACAGTGA..........................................................................................................................................................................................................................................................................2411.001000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................GA---------------------CC---------GCAGC----------ACACGCTGGAG-----CA.....................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
ACCAGCAACGCAACAACAACAACATTGA------------------------GGAGAACATTGGCACT------------AACACCAATTCGTCAACAGTAAGCATTGCCAGCAATTTATCCGAACGCTCCGATTGC------GAATTAAGCTCGAGCAATGGCGTCGGC------AGC------GGCAGCGG-----AGC-GGCGCAGTCGCAGC-AAACAGTGG--AGCAG------ACAATGCCAGCA-----------------------------------ATG------CCCTCGGCAGCTGCGTATTTTTCCGAGAAGCCGATGCCGACAATACAGCCA----GAA---------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................GTATTTTTCCGAGAAGCCGATGCCGA.................................2611.001000001
.............................................................................................................................................................................................................................AGTGG--AGCAG------ACAATGCCAGC......................................................................................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................CCCTCGGCAGCTGCGTAT.......................................................1811.001000100
...............................................................................................................................................................................................GG-----AGC-GGCGCAGTCGCAGC-.......................................................................................................................................................1911.001100000
droGri2
ATCAGCAGCGCACCAACAACAACAATA---------------------------------------------TG------GATGAACACTCATCAACGGTGAGCATCGCCAGCAATTTATCAGAGCGTTCCGACTGT------GAGTTAAGCCTGAGCAACGGCGCCGGA------ATC------GGAATCCA---------GGCACAACAGC----AGATGCCGGAG-----CAACAAATCGTGACAGCAACTGCAGCTGCAGCACCGCTCGAACCAAAT-----CCA------ACTGGAATCGCTGCTTATTTTGCA----------------CAGCCCGAACC----GAC---------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................GC----AGATGCCGGAG-----CAACA..................................................................................................................................1811.00110
..........................................................................................................................................................................................GAATCCA---------GGCACAACAGC----A......................................................................................................................................................1911.00110
..........................................................................................................................................................................................................................GATGCCGGAG-----CAACAAATCGTG...........................................................................................................................2211.00110

Generated: 05/17/2015 at 10:44 PM