ID:

dya_493

 Coordinate:

2R:8127371-8127521 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.1 -17.4

Flybase annnotation

CDS [Dyak\GE12508-cds]; exon [dyak_GLEANR_12756:2]; intron [Dyak\GE12508-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCGCGCACCTGACAGCCGAAATCCCCCGGAGCTTTGGTAGCTTTCCATAGATCCGGCGATTTTACCCCCGGACAGATAAAAAAACACCGTGTGTGTCGTCGTGTCTACTGTGCCTGATTAATGGGGTACAGTTGGCCCTCGTAGCAACGTTAACTTATCGCCTCTGACCTTACTCTATATATACACTTTATTTGCCCTCAGACTACACCTGGATTAGCACCAACGTTTACGGAGCCCTGCCCCCAGGTGCC
**********************************************************************************............(((.........(((((((((........))))))))).)))******************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V120
male body		 M056
embryo
 V058
head
........................................................................................................................................................................................................GACTACACCTGGATTAGCAC............................... 20 0 1 5.00 5 1 4 0 0
........................................................................................................................................................................................................GACTACACCTGGATTAGCACC.............................. 21 0 1 4.00 4 1 1 2 0
...................................................................................................................................................................................................................GATTAGCACCAACGTTTACGGA.................. 22 0 1 3.00 3 1 1 1 0
......................................................................................................................................................................................................GAGACTACACCTGGATTAGC................................. 20 1 1 3.00 3 1 2 0 0
...........................................................................................................................................................................................................................CCAACGTTTACGGAGCCCT............. 19 0 1 3.00 3 3 0 0 0
........................................................................................................................................................................................................GACTACACCTGGATTAGCA................................ 19 0 1 2.00 2 1 1 0 0
..................................................................................AACACCGTGTGTGTCGTCGTGTCTACTGT............................................................................................................................................ 29 0 1 2.00 2 0 2 0 0
..................................................................................................................................................................................................................................TTACGGAGCCCTGCCCCCAGGT... 22 0 1 2.00 2 0 2 0 0
....................................GTAGCTTTCCATAGATCCGGCG................................................................................................................................................................................................. 22 0 1 2.00 2 2 0 0 0
..............................................................................................................................................................................................................................ACGTTTACGGAGCCCTGCCCCCA...... 23 0 1 2.00 2 2 0 0 0
............................................................................................................................................................................................................ACACCTGGATTAGCACCAACGT......................... 22 0 1 2.00 2 2 0 0 0
..........................................................................................................................................................................................................CTACACCTGGATTAGCACCAAC........................... 22 0 1 2.00 2 1 1 0 0
.......................................................................................................................................................................................................AGACTACACCTGGATTAGCAC............................... 21 0 1 2.00 2 0 2 0 0
........................................................................................................................................................................................................GACTACACCTGGATTAGCACCAA............................ 23 0 1 2.00 2 1 1 0 0
......................................................................................................................................................................................................GAGACTACACCTGGATTAGCAC............................... 22 1 1 2.00 2 1 1 0 0
....................................................................................................................................................................................................................ATTAGCACCAACGTTTACGGA.................. 21 0 1 2.00 2 0 2 0 0
.............AGCCGAAATCCCCCGGAGCTTTG....................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
...........................................................................................................................................................................................................TACACCTGGATTAGCACCAAC........................... 21 0 1 1.00 1 0 1 0 0
.......................................................................................................................................................................................................AGGCTACACCTGGATTAGCAC............................... 21 1 1 1.00 1 1 0 0 0
..........................................................AGTTTACCCCCGGACAGAT.............................................................................................................................................................................. 19 1 1 1.00 1 0 0 1 0
..................................................................................................................................................................................................TCCTGAGACTACACCTGG....................................... 18 2 1 1.00 1 0 0 0 1
....................................................................................................................ATTAATGGGGTACAGTTGGC................................................................................................................... 20 0 1 1.00 1 0 1 0 0
..................................................................................................................................................................................................................................TTATGGAGCCCTGCCCCCAGGTGCC 25 1 1 1.00 1 0 0 1 0
...................................................................................................................................................................................................................GATTAGCACCAACGTTTACGGAGC................ 24 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................................CTACACCTGGATTAGCACCAACGTTTAC..................... 28 0 1 1.00 1 1 0 0 0
....GCACCTGACAGCCGAAATCCCCCGGAGCT.......................................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0
...................................................................................ACACCGTGTGTGTCGTCGTGTCTACTGTGC.......................................................................................................................................... 30 0 1 1.00 1 0 1 0 0
......................................AGCTTTCCATAGATCCGGC.................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0
....................ACCCCCCGGAGCTTTGGTAGCT................................................................................................................................................................................................................. 22 1 1 1.00 1 0 0 1 0
......................................................................................................................................................................................................GAGACTACACCTGGATTAGCACCAACGT......................... 28 1 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................................................TTAGCACCAACGTTTACGGAGCC............... 23 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................................................................................AACGTTTACGGAGCCCTGCCCCCAGGTG.. 28 0 1 1.00 1 0 1 0 0
..................................................................................AACACCGTGTGTGTCGTCGTGTC.................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0
.......................................................................................................................................................................................................AGACTACACCTGGATTAGC................................. 19 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................................CAACGTTTACGGAGCCCTGCCCCCAG..... 26 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................GGATTAGCACCAACGTTTACGGA.................. 23 0 1 1.00 1 1 0 0 0
..............................................................................................................................................AGCAACGTTAACTTATCGCCTCTGAC................................................................................... 26 0 1 1.00 1 1 0 0 0
................................................................................................................................................CAACGTTAACTTATCGCCTC....................................................................................... 20 0 1 1.00 1 0 0 1 0
....................................................................................................................................................................................................................ATTAGCACCAACGTTTACGG................... 20 0 1 1.00 1 0 1 0 0
.................................................................................................................................................................................................................TGGATTAGCACCAACGTTTACGGAGCC............... 27 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................ATATACACTTTATTTGCCCTCAG.................................................. 23 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................ACACCTGGATTAGCACCAACGTTTACG.................... 27 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................................CTACACCTGGATTAGCAC............................... 18 0 1 1.00 1 0 0 1 0
...............................................................................................................................ACAGTTGGCCCTCGTAGCAAC....................................................................................................... 21 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................................................GACTACACCTGGATTAGCACCAAC........................... 24 0 1 1.00 1 0 1 0 0
......................................................................................................................................................................................................GAGACTACACCTGGATTAGCA................................ 21 1 1 1.00 1 0 1 0 0
.................................TTGGTAGCTTTCCATAGATCCGGCGAT............................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0
.........................................................................................................................................................................................................ACTACACCTGGATTAGCAC............................... 19 0 1 1.00 1 1 0 0 0
.....................................................................................ACCGTGTGTGTCGTCGTGTCTACTGTGC.......................................................................................................................................... 28 0 1 1.00 1 0 1 0 0
.................................TTGGTAGCTTTCCATAGATCCGGCGA................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0
...............................................................................................................................................................................................................GGAGGATTAGCACCAACGTTTACGG................... 25 3 1 1.00 1 1 0 0 0
.........................................................................................................TACTGTGCCTGATTAATAGGGT............................................................................................................................ 22 1 1 1.00 1 0 1 0 0
........................................................................................................................................................................................................GACTACACCTGGATTAGCACCAACGC......................... 26 1 1 1.00 1 1 0 0 0
......................................................................................................................................................................................ACACTTTATTTGCCCTCAG.................................................. 19 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................................GGAGCCCTGCCCCCAGGTGCC 21 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................................CAACGTTTACGGAGCCCTG............ 19 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................................................................................................GCCCTGCCCCCAGGTGCC 18 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................GATTAGCACCAACGTTTACG.................... 20 0 1 1.00 1 0 1 0 0
............................................................................................................................................................................................................ACACCTGGATTAGCACCAAC........................... 20 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................................TACGGAGCCCTGCCCCCAGG.... 20 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................................TGACGGAGCCCTGCCCCCAGGTGCC 25 1 1 1.00 1 0 0 1 0
..........................................................ATTTTACCCCCGGACAGATAAAAA......................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0
................................................................................................................................................................................................................................GTTTACGGAGCCCTGCCCCCAGGTGCC 27 0 1 1.00 1 1 0 0 0
......................................................................................................GTCTACTGTGCCTGATTAATGGGA............................................................................................................................. 24 1 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................................................ACGTTTACGGAGCCCTGCCCCCAGGT... 26 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................................AGCACCAACGTTTACGGAGCCCTGCCCC........ 28 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................................................GACTACACCTGGATTAGCACCAACGT......................... 26 0 1 1.00 1 0 0 1 0
................................................................................................................................................................................................................................GTTTACGGAGCCCTGCCCCCAGGT... 24 0 1 1.00 1 0 1 0 0
................................................................................................................................................................................................................CTGGATTAGCACCAACGTTTACGG................... 24 0 1 1.00 1 0 1 0 0
........................................................................................................................................................................................................GACTACACCTGGATTAGCACCAACG.......................... 25 0 1 1.00 1 0 1 0 0
.................................................................................................................CTGATTAATGGGGTACAGT....................................................................................................................... 19 0 1 1.00 1 0 1 0 0
...................................GGTAGCTTTCCATAGATCCGGCGAT............................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0
.......................................................................................................................................................................................................................................GAGCCCTGCCCCCAGGTGCC 20 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................................CTACACCTGGATTAGCACCAA............................ 21 0 1 1.00 1 0 1 0 0
............................................................................................................................................................................................................................CAACGTTTACGGAGCCCTGC........... 20 0 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................................GGAGACTACACCTGGATTAGCAC............................... 23 2 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................................TTTACGGAGCCCTGCCCCCAGGTGC. 25 0 1 1.00 1 1 0 0 0
..........................................................................GATAAAAAAACACCGTGTGT............................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0
......................................................................................CCGTGTGTGTCGTCGTGTCTACTGTGC.......................................................................................................................................... 27 0 1 1.00 1 0 1 0 0
........................................................................................................................................................................................................GACTACACGTGGATTAGCACCAACGTT........................ 27 1 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................................................ACGGAGCCCTGCACCCAGCTGT. 22 3 2 0.50 1 0 0 0 1
...................................................................................ACATCGTGTGCGTCATCGTG.................................................................................................................................................... 20 3 13 0.08 1 0 0 0 1
..................................................................................................................TGATACATGGGGTACA......................................................................................................................... 16 2 20 0.05 1 0 0 0 1

Anti-sense strand reads

GGCGCGTGGACTGTCGGCTTTAGGGGGCCTCGAAACCATCGAAAGGTATCTAGGCCGCTAAAATGGGGGCCTGTCTATTTTTTTGTGGCACACACAGCAGCACAGATGACACGGACTAATTACCCCATGTCAACCGGGAGCATCGTTGCAATTGAATAGCGGAGACTGGAATGAGATATATATGTGAAATAAACGGGAGTCTGATGTGGACCTAATCGTGGTTGCAAATGCCTCGGGACGGGGGTCCACGG
*******************************************************************************************************************............(((.........(((((((((........))))))))).)))********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V058
head
 M056
embryo
..........................GCGTCAAAACCATCCAAAGG............................................................................................................................................................................................................. 20 3 18 0.06 1 1 0
.................................................CTAGCCAGCTAACATGGG........................................................................................................................................................................................ 18 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2R:8127321-8127571 - dya_493 CCG-CGCACCTGACAGCCGAAATCCCC-CGGAGCTTTGGTAGCTTTC-CATAGATCCGGCGAT--TTTACCCCCGG-------ACAGATAAAA-AAA------CA----CCGTGTG-----------------TGTCGTCGTGTCTACTGTGCC---TGATTA---ATGGGGTACAGTTGGCCCTCG-TAGC-----------------------------AAC----GTT-AACT--TATCG-----CCTCT-GACCTTACTCTATAT------ATACAC---------TTTATTTG-CCCTCAGACTACACCTGGAT-TAGCACCAACGTTTACGGAGCCCTGCCCCCAGGTGCC
droEre2 scaffold_4845:16981506-16981727 - CCG-CGCAGGTGACAGCCGAAATCCCT-TGGAGCTTTGGTAGCTTTC-CACAGATCCAGCGAT--TTTACCCC-------------------------------------------------------------------------ACTGTGCC---TGATTA---ATGGGGTACAGTTGGCCCTCG-CAGC-----------------------------CAC----GTT-AACT--TATCG-----CCTCT-GACCCTGCTCTATAT------ATATATGTATGTATATATTTTTG-TTCGCAGACTACACGTGGAT-TAGCAGCAACGTTTACGGATCCCTGCCCCCAGGAGCT
droSec2 scaffold_1:6357023-6357242 + CCG-AGCACCTGACAGCCGAAATCCCT-TGGAGCTTTGGTAGCTTTC-CATAGATCCAGCGAT--TCTACACCCTG-------ACAGATAAAA-G--A-----AACC------------------------------------TCTACTGTGGC---TGATTA---ATGGTGTACAGTTGGCCC--------------------------------------AA----GTT-CACT--TATCG-----CCTCT-GACCTTAT---ATA----------TAT---------TTTCTTCG-CTCTCAGACTACACCTGGAT-TAGCACCAACGTTTACGGATCCCTGCCCCCAGGAGCC
droSim2 2r:9519769-9519987 + CCG-AGCACCTGACAGCCGAAATCCCT-TGGAGCTTTGGTAGCTTTC-CATAGATCCAGCGAT--TCTACACCCTG-------ACAGATAAAA-G--A-----AACC------------------------------------TCTACTGTGGC---TGATTA---ATGGTGTACAGTTGGCCC--------------------------------------AA----GTT-AACT--TATCG-----CCTCT-GACCTATATG--------------TAT---------TTTCTTCG-CTCTCAGACTACACCTGGAT-TAGCACCAACGTTTACGGATCCCTGCCCCCAGGAGCC
dm3 chr2R:8841271-8841512 + CCG-CGCACCTGACAGCCGAAATCCCT-TGGAGCTTTGGTAGCTTTC-CATAGATCCAGCGAT--TCTACACCCTG-------ACAAATAAAA-G--ACAAAAAACC------------------------------------TCTACTGTGGC---TGATTA---ATGGTGTACAGTTGGCCCTCG-TTG-----GCC----------------------CAA----GTT-AACT--TATCG-----CCTCT-GACCTTGCTCTATAT------ATATAT---------TTTATTCG-CCCTCAGACTACACCTGGAT-TAGCACCAACGTTTACGGATCCCTGCCCCCAGGAGCC
droEug1 scf7180000409672:3791568-3791806 - CTG-CTCACCTGACACCCGAAATCCCTTTGGAGCTTTGGAAGCTTTC-CATAGATCCAACTAGATTTCACACCCGG-------CTAGATAACGAAAA------TAG--ACAGAGTG-----------------GGGA-------------GGTC---TGATTA---ATGGGGTACAGTTGGGCCTCG-TAGT-----------------------------TAA----GTG-A-----TATCG-----AATCT-AACTTTGTTCCAAAT------ATTCA-----------CTCTTCG-CCTGCAGAATACACCTGGAT-TAGCTCGAATGTTTATGGTTCTCTGCCACCTGGCGCC
droBia1 scf7180000302292:1897575-1897809 + CCG-CTCACCTGACAGCCCAAATCCCT-GGGAGCTTTGGAAGCTTTC-CGCAGATCCGGCGAT--ATCACACCCGG-------CTAGATAAC-AAAA------CAG--ACAGAGTG----------------------------------GGTC---TGATTA---ATGGGGTACAGTTGGGCCTCC-TAGT-----------------------------TGA----GCT-AACC--CATCGA--CACATCT-AACCTTGTTCCACTT------AC-------------ACCACTCA-CTTGCAGACTACACCTGGAT-TAGCTCGAACGTCTACGAAGGCCTGCCACCTGGCGCC
droTak1 scf7180000415762:286857-287092 - CCG-CTCACCTGACAGCCCAAATCCCT-TGGAGCTTTGGAAGCTTTC-CATAGATCCGCCGAT--TTCACACCCGG-------CCAGATAAG-GAAA------TAG--ACAGAGTG----------------------------------TTTC---TGATTAGTG-TGGGGTACAGTTGGGCCTCG-TAGT-----------------------------TGG----GCT-AACT--TATCGTTTCGTATCT-GACCTTGTTCCAAAT------AT-------------T---CTTG-CCCACAGACTACACCTGGAT-CAGCACCAACGTCTACGGAGCCCTGCCACCTGGCGCC
droEle1 scf7180000491215:198523-198755 - CCG-CTCACCTGACAGCCGAAATCCCC-TGGAGCTTTGGAAGCTTTC-CATAGATCCGCCGAT--TTCACACCTGG-------TCAGATAAC-GAAA------TAG--ACAGAGTG----------------------------------GGTC---TGATTATATATG-AGTACAGTTGGGCCACACCAGT-----------------------------TA-------A-AACT--TATCG-----CCTCT-GACCTTGCTCCAAAT------AT-------------TCCACTCGTTTTGCAGACTACACCTGGAT-TAGCACCAATGTCTACGAATCCCTGCCACCGGGTGCC
droRho1 scf7180000779957:51578-51814 - TTG-CTCACCTGACAGCCGAAATCCCC-TGGAGCTTTGGAAGCTTGC-CGACGATCCAACGAT--TTCACTAGCTAAATAAATATAGATAAG-AAAA------TAG--ACAGAGTG----------------------------------GTTC---AAGTTA---ATGG-GTACAGTTGGTCGCCA-A-CC---------------------A-------TTT----G-T-AACT--TATCG-----CCACT-GACCTTGCTCCAAAT------AT-------------TCCATTCC-CTTGCAGACTACACCTGGAT-TAGCACCAACGTTTACGATGCCCTGCCAGCGGGAGCC
droFic1 scf7180000454066:430189-430415 - CAGGCTCACCTGACAGTTCAAATCCCC-CGGAGCTTTGGAAGCTTTC-CATAGATCCGGCGAT--ATTTCACCCCA-------ACTGATAAG-AAAA------TAG--ACAGAGTG----------------------------------GGGC-TGCGATTAGGAAAG-GGTACAGTTGGGCCGCG-AAGT------------------------------------GTT-AACT--TATCG-----CCTTTCGACCTTGTTCCAAAT------AC----------------------TCCACAGACTACACCTGGAT-TAGCGCCAATGTCTACGGACCCCTGCCGCCCGGAGCC
droKik1 scf7180000302639:500410-500520 - AC----CACCTGACAGCCGTAATCCCT-TGGAGCTTTGGAAGCTTTC-CACAGATCTGGCGAT--TTCACACCGGG------AATAGATAAT-AAAA------CAG--ACTGAG-------------------------------------------TGATTA---ATGG-GTACAGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13266:6311444-6311680 + CAG-TCAACTTGACAGTTGAAATCCCT-TGAAGCTTTCCTAGCTTTC-CA--------GCCAA--ATCT-CCCCCG-------AAAGATAATG-G--CTAAAATAT--ATAGACCC----------------------------------CGGCTAGTGATTA---ATGG-GTACAGTTGCGACCCA-AAAA-----------------------------AAA----GTG-AATA--TAC-T-----TAACT-AACCTTGCCCTATTTCTTGTGGTTTT----------TGTTGTTT-CTTGTAGACTACGTTTGGAT-TAGCACCAATGTCTATGGAGGTCTGCCTGGTGGCGCC
droBip1 scf7180000395839:466457-466685 + CAG-TTAACTTGACAGTTGAAATCCCT-TGAAGCTTTGGTAGCTTTC-CA--------GC--T--TAATCTCCTCG-------AAAGATAATA-G--CTAAAATATATACAGACTT-----------------------------------GGCTAGTGATTA---ATGG-GTACAGTTGCGGCCCA-AAAA-----------------------------AAAATATG-TGGATATAC---T-----TAACT-AACCTTGGTCTATTT-----------------------TTTTCGTCCTTTAGACTACGTTTGGAT-TAGCAGCAATGTCTATGGAGGTCTGCCCGGTGGCGCC
dp5 3:5609044-5609335 + AAG-TTCAGCTGACAGTGAAAATCCCC-TGGAGCTTCGGTGGCTTTCTCATAGATCTTACGAT--TTCACACCCCG-------TGAGATAACA-G--ACCA-----------AGTTCTTGTTATTAATGTGCGAGGGGTGTGGTGTAGAGTGGC---AGGCCG---ACTGTACACA-TCAGCAGTCA-AAGAACCGGGCTGGGCTGGGCTGTAATCAGTAAAATATATT-TAGACAAACGTCA-----GGTCT-AACCTTGGTCATCAT------TT-----------------TCCC-TCTGCAGACCACACCTGGAT-CAGCCGCAACGTCTTCGACCAGCTGCCGCCCTGCGCC
droPer2 scaffold_2:5803603-5803894 + dpe_1083 AAG-TTCAGCTGACAGTGAAAATCCCC-TGGAGCTTCGGTGGCTTTCTCATAGATCTTACGAT--TTCACACCCCG-------TGAGATAACA-G--ACCA-----------AGTTCTTGTTATTAATGTGCGAGGGGTGTGGTGTGGTGTGGC---AGGCCG---ACTGTACACA-TCAGCAGTCA-AAGCACCGGGCTGGGCTGAGCTTTAATCAGTAAAATATATT-TTGACAAACGTCA-----GGTCT-AACCTTGGTCCACAT------TT-----------------TCCC-TCTGCAGACCACACCTGGAT-CAGCCGCAACGTCTTCGACCAGCTGCCGCCCTGCGCC
droWil2 scf2_1100000004510:1051751-1051844 + AC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--TATCG-----GTCCC-TCTCTCTCTCTCTC----------TGC---------TCTCTT-T-GTTGCAGAACACACCTGGGT-GCACTCGACTCCATATGCCGCTCTGCCTCCGTACGCT
droVir3 scaffold_12875:583847-583903 + CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGATCACACTTGGGT-TGCCCGCAATGTGTACGATGCACTGCCGCCATTTGCC
droMoj3 scaffold_6496:3589019-3589088 + TG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC---------TTTACCTT-TTTCTAGAACACACCTGGAT-TGCCTGCAATGTTTACGAAGCTCTGCCGCCATTCGCC
droGri2 scaffold_14994:35068-35129 + TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-TTTACAGCTTACAAATGGGTGCAGTCCTCGGGCGTATGCATCGCTGCCACAACATGCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CCG-CGCACCTGACAGCCGAAATCCCC-CGGAGCTTTGGTAGCTTTC-CATAGATCCGGCGAT--TTTACCCCCGG-------ACAGATAAAA-AAA------CA----CCGTGTG-----------------TGTCGTCGTGTCTACTGTGCC---TGATTA---ATGGGGTACAGTTGGCCCTCG-TAGC-----------------------------AAC----GTT-AACT--TATCG-----CCTCT-GACCTTACTCTATAT------ATACAC---------TTTATTTG-CCCTCAGACTACACCTGGAT-TAGCACCAACGTTTACGGAGCCCTGCCCCCAGGTGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCAC...............................2015.00501000040000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCACC..............................2114.00401200010000
............................................................................................................................................................................................................................................................................................................................GAT-TAGCACCAACGTTTACGGA..................2213.00301100010000
.....................................................................................................................................................................................................................................................................................................................................CCAACGTTTACGGAGCCCT.............1913.00303000000000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCA................................1912.00201000010000
...............................................................................................AA------CA----CCGTGTG-----------------TGTCGTCGTGTCTACTGT..............................................................................................................................................................................................................2912.00200000020000
............................................................................................................................................................................................................................................................................................................................................TTACGGAGCCCTGCCCCCAGGT...2212.00200000020000
......................................GTAGCTTTC-CATAGATCCGGCG........................................................................................................................................................................................................................................................................................................2212.00202000000000
........................................................................................................................................................................................................................................................................................................................................ACGTTTACGGAGCCCTGCCCCCA......2312.00202000000000
.....................................................................................................................................................................................................................................................................................................................ACACCTGGAT-TAGCACCAACGT.........................2212.00202000000000
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCACCAAC...........................2212.00201000010000
................................................................................................................................................................................................................................................................................................................AGACTACACCTGGAT-TAGCAC...............................2112.00200000020000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCACCAA............................2312.00201000010000
.............................................................................................................................................................................................................................................................................................................................AT-TAGCACCAACGTTTACGGA..................2112.00200000020000
..............AGCCGAAATCCCC-CGGAGCTTTG...............................................................................................................................................................................................................................................................................................................................2311.00101000000000
....................................................................................................................................................................................................................................................................................................................TACACCTGGAT-TAGCACCAAC...........................2111.00100000010000
...............................................................................................................................................................ATTA---ATGGGGTACAGTTGGC...............................................................................................................................................................................2011.00100000010000
............................................................................................................................................................................................................................................................................................................................GAT-TAGCACCAACGTTTACGGAGC................2411.00101000000000
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCACCAACGTTTAC.....................2811.00101000000000
.....GCACCTGACAGCCGAAATCCCC-CGGAGCT..................................................................................................................................................................................................................................................................................................................................2911.00100000010000
................................................................................................A------CA----CCGTGTG-----------------TGTCGTCGTGTCTACTGTGC............................................................................................................................................................................................................3011.00100000010000
........................................AGCTTTC-CATAGATCCGGC.........................................................................................................................................................................................................................................................................................................1911.00101000000000
..............................................................................................................................................................................................................................................................................................................................T-TAGCACCAACGTTTACGGAGCC...............2311.00101000000000
.......................................................................................................................................................................................................................................................................................................................................AACGTTTACGGAGCCCTGCCCCCAGGTG..2811.00100000010000
...............................................................................................AA------CA----CCGTGTG-----------------TGTCGTCGTGTC....................................................................................................................................................................................................................2311.00100100000000
................................................................................................................................................................................................................................................................................................................AGACTACACCTGGAT-TAGC.................................1911.00101000000000
......................................................................................................................................................................................................................................................................................................................................CAACGTTTACGGAGCCCTGCCCCCAG.....2611.00101000000000
...........................................................................................................................................................................................................................................................................................................................GGAT-TAGCACCAACGTTTACGGA..................2311.00101000000000
.............................................................................................................................................................................................AGC-----------------------------AAC----GTT-AACT--TATCG-----CCTCT-GAC....................................................................................................2611.00101000000000
...............................................................................................................................................................................................C-----------------------------AAC----GTT-AACT--TATCG-----CCTC.........................................................................................................2011.00100100000000
.............................................................................................................................................................................................................................................................................................................................AT-TAGCACCAACGTTTACGG...................2011.00100000010000
..........................................................................................................................................................................................................................................................................................................................TGGAT-TAGCACCAACGTTTACGGAGCC...............2711.00101000000000
...........................................................................................................................................................................................................................................................................AT------ATACAC---------TTTATTTG-CCCTCAG...................................................2311.00101000000000
.....................................................................................................................................................................................................................................................................................................................ACACCTGGAT-TAGCACCAACGTTTACG....................2711.00101000000000
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCAC...............................1811.00100100000000
.............................................................................................................................................................................ACAGTTGGCCCTCG-TAGC-----------------------------AAC----.................................................................................................................................2111.00101000000000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCACCAAC...........................2411.00100000010000
...................................TTGGTAGCTTTC-CATAGATCCGGCGAT--....................................................................................................................................................................................................................................................................................................2711.00100000010000
..................................................................................................................................................................................................................................................................................................................ACTACACCTGGAT-TAGCAC...............................1911.00101000000000
........................................................................................................A----CCGTGTG-----------------TGTCGTCGTGTCTACTGTGC............................................................................................................................................................................................................2811.00100000010000
...................................TTGGTAGCTTTC-CATAGATCCGGCGA.......................................................................................................................................................................................................................................................................................................2611.00100100000000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCACCAACGC.........................2611.00101000000000
.....................................................................................................................................................................................................................................................................................ACAC---------TTTATTTG-CCCTCAG...................................................1911.00101000000000
................................................................................................................................................................................................................................................................................................................................................GGAGCCCTGCCCCCAGGTGCC2111.00101000000000
......................................................................................................................................................................................................................................................................................................................................CAACGTTTACGGAGCCCTG............1911.00101000000000
...................................................................................................................................................................................................................................................................................................................................................GCCCTGCCCCCAGGTGCC1811.00101000000000
............................................................................................................................................................................................................................................................................................................................GAT-TAGCACCAACGTTTACG....................2011.00100000010000
.....................................................................................................................................................................................................................................................................................................................ACACCTGGAT-TAGCACCAAC...........................2011.00101000000000
.............................................................................................................................................................................................................................................................................................................................................TACGGAGCCCTGCCCCCAGG....2011.00101000000000
.............................................................AT--TTTACCCCCGG-------ACAGATAAAA-A......................................................................................................................................................................................................................................................................2411.00100000010000
..........................................................................................................................................................................................................................................................................................................................................GTTTACGGAGCCCTGCCCCCAGGTGCC2711.00101000000000
..............................................................................................................................................GTCTACTGTGCC---TGATTA---ATGGGA.........................................................................................................................................................................................2411.00101000000000
........................................................................................................................................................................................................................................................................................................................................ACGTTTACGGAGCCCTGCCCCCAGGT...2611.00101000000000
.................................................................................................................................................................................................................................................................................................................................AGCACCAACGTTTACGGAGCCCTGCCCC........2811.00101000000000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCACCAACGT.........................2611.00100100000000
..........................................................................................................................................................................................................................................................................................................................................GTTTACGGAGCCCTGCCCCCAGGT...2411.00100000010000
.........................................................................................................................................................................................................................................................................................................................CTGGAT-TAGCACCAACGTTTACGG...................2411.00100000010000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCACCAACG..........................2511.00100000010000
.........................................................................................................................................................C---TGATTA---ATGGGGTACAGT...................................................................................................................................................................................1911.00100000010000
.....................................GGTAGCTTTC-CATAGATCCGGCGAT--....................................................................................................................................................................................................................................................................................................2511.00100000010000
.................................................................................................................................................................................................................................................................................................................................................GAGCCCTGCCCCCAGGTGCC2011.00101000000000
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCACCAA............................2111.00100000010000
......................................................................................................................................................................................................................................................................................................................................CAACGTTTACGGAGCCCTGC...........2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................TTTACGGAGCCCTGCCCCCAGGTGC.2511.00101000000000
......................................................................................GATAAAA-AAA------CA----CCGTGTG-----------------T...............................................................................................................................................................................................................................2011.00100000010000
.............................................................................................................CCGTGTG-----------------TGTCGTCGTGTCTACTGTGC............................................................................................................................................................................................................2711.00100000010000
droEre2
CCG-CGCAGGTGACAGCCGAAATCCCT-TGGAGCTTTGGTAGCTTTC-CACAGATCCAGCGAT--TTTACCCC-------------------------------------------------------------------------ACTGTGCC---TGATTA---ATGGGGTACAGTTGGCCCTCG-CAGC-----------------------------CAC----GTT-AACT--TATCG-----CCTCT-GACCCTGCTCTATAT------ATATATGTATGTATATATTTTTG-TTCGCAGACTACACGTGGAT-TAGCAGCAACGTTTACGGATCCCTGCCCCCAGGAGCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................GACTACACGTGGAT-TAGCAGC..............................2115.0053000200
.................................................................................................................................................................................................................................................................................................................GACTACACGTGGAT-TAGCAG...............................2015.0051000310
..........................................................................................................................................................................................................................................................................................................................................GTTTACGGATCCCTGCCCCCAGGA...2414.0043000010
............................................................................................................................................................................................................................................................................................................................................TTACGGATCCCTGCCCCCAGGAGCT2513.0030011010
.................................................................................................................................................................................................................................................................................................................GACTACACGTGGAT-TAGCAGCAAC...........................2413.0031000200
............................................................................................................................................................................................................................................................................................................................................TTACGGATCCCTGCCCCCAGGAGC.2413.0031000110
.........................................................................................................................................................................................................................................................................................................................GTGGAT-TAGCAGCAACGTTTACGG...................2413.0033000000
.....................................................................................................................................................................................................................................................................................................................ACACGTGGAT-TAGCAGCAAC...........................2013.0030000300
..................................................................................................................................................................................................................................................................................................................ACTACACGTGGAT-TAGCAGC..............................2013.0031000200
...................................................................................................................................................................................................................................................................................................................CTACACGTGGAT-TAGCAGC..............................1912.0020000200
.............................................................................................................................................................................................................................................................................................................................AT-TAGCAGCAACGTTTACGGAT.................2212.0021000100
............................................................................................................................................................................................................................................................................................................................GAT-TAGCAGCAACGTTTACGGA..................2212.0020000110
..........................................................................................................................................................................................................................................................................................................................................GTTTACGGATCCCTGCCCCCAGGAGCT2712.0020000020
.....................................................................................................................................................................................................................................................................................................................ACACGTGGAT-TAGCAGCAACGT.........................2212.0020000200
................................................................................................................................................................................................................................................................................................................AGACTACACGTGGAT-TAGC.................................1912.0020000200
...................................................................................................................................................................................................................................................................................................................CTACACGTGGAT-TAGCAGCAA............................2112.0020000110
.......................................................................................................................................................................................................................................................................................................................................AACGTTTACGGATCCCTGCCCC........2211.0010100000
.................................................................................................................................................................................................................................................................................................................GACTACACGTGGAT-TAGCA................................1911.0010000010
......................................................................................................................................................................................................................................................................................................................CACGTGGAT-TAGCAGCAACGTTTACGG...................2711.0010000100
...................................................................................................................................................................................................................................................................................................................CTACACGTGGAT-TAGCAGCAAC...........................2211.0011000000
.................................................................................................................................................................................................................................................................................................................GACTACACGTGGAT-TAGCAGCAACGTTT.......................2811.0010000100
....................................................................................................................................................................................................................................................................................................................TACACGTGGAT-TAGCAGCAA............................2011.0010000100
......................................................................................................................................................................................................................................................................................................................................CAACGTTTACGGATCCCTGCCC.........2211.0010100000
.........................................................................................................................................................................................................................................................................................................................GTGGAT-TAGCAGCAACGTTTACG....................2311.0010000100
........................................................................................................................................................................................................................................................................................................................CGTGGAT-TAGCAGCAACGTTTAC.....................2311.0011000000
.................................................................................................................................................................................................................................................................................................................................AGCAGCAACGTTTACGGATCCC..............2211.0010000100
...............................................................................................................................................................................................................................................................................................................................................CGGATCCCTGCCCCCAGGAGCC2211.0010100000
.....................................................................................................................................................................................................................................................................................................................................GCAACGTTTACGGATCCCTGCCCC........2411.0011000000
....................................................................................................................................................................................................................................................................................................................TACACGTGGAT-TAGCAGC..............................1811.0010000100
................................................................................................................................................................................................................................................................................................................AGACTACACGTGGAT-TAGCAGC..............................2211.0010000100
......................................GTAGCTTTC-CACAGATCCAGCGAT--....................................................................................................................................................................................................................................................................................................2411.0010000100
..........................................................................................................................................................................................................................................................................................................................................GTTTACGGATCCCTGCCCC........1911.0011000000
.....................ATCCCT-TGGAGCTTTGGTAGCT.........................................................................................................................................................................................................................................................................................................................2211.0010100000
.........................................................................................................................................................................................................................................................................................................................GTGGAT-TAGCAGCAACGTTT.......................2011.0010000100
................................................................................................................................................................................................................................................................................................................AGACTACACGTGGAT-TAGCAGCAA............................2411.0010000100
.....................................GGTAGCTTTC-CACAGATCCAGC.........................................................................................................................................................................................................................................................................................................2211.0011000000
.............................................................................................................................................................................................................................................................................................................................................TACGGATCCCTGCCCCCAGGAGCT2411.0011000000
..........................................................................................................................................................................................................................................................................................................................................GTTTACGGATCCCTGCCCCCAG.....2211.0011000000
............................................................................................................................................................................................................................................................................................................................................TTACGGATCCCTGCCCCCAGGAT..2311.0011000000
..................................................................................................................................................................................................................................................................................................................................GCAGCAACGTTTACGGATC................1911.0010001000
...........................................................................................................................................................................................................................................................................................................................................TTTACGGATCCCTGCCCCCAGGAGC.2511.0010100000
......................................................................................................................................................................................................................................................................................................................................CAACGTTTACGGATCCCTGCCCCCA......2511.0011000000
...................................TTGGTAGCTTTC-CACAGATCCAGCGAT--T...................................................................................................................................................................................................................................................................................................2811.0010000100
................................................................................................................................................................................................................................................................................................................................TAGCAGCAACGTTTACGGAT.................2011.0010000100
.................................................................................................................................................................................................................................................................................................................GACTACACGTGGAT-TAGCAGCAACGT.........................2611.0010000100
...................................................................................................................................................................................................................................................................................................................CTACACGTGGAT-TAGCAG...............................1811.0010000010
.................................................................................................................................................................................................................................................................................................................GACTACACGTGGAT-TAGC.................................1811.0010000010
..............................................................................................................................................................................................................................................................................................................................................ACGGATCCCTGCCCCCAGGAGCT2311.0010000100
...........................................................................................................................................................................................................................................................................................................................GGAT-TAGCAGCAACGTTTACGG...................2211.0011000000
.............................................................................................................................................................................................................................................................................................................................AT-TAGCAGCAACGTTTACGGATCCCT.............2611.0011000000
........................................................................................................................................................................................................................................................................................................................CGTGGAT-TAGCAGCAACGT.........................1911.0010000100
...................................................................................................................................................................................................................................................................................................................CTACACGTGGAT-TAGCAGCAACGT.........................2411.0010000010
.........................................................................................................................................................................................................................................................................................................................GTGGAT-TAGCAGCAACGTTTACGGA..................2511.0010000100
.........................................................................................................................................................................................................................................................................................................................................CGTTTACGGATCCCTGCCCCCAG.....2311.0010000100
.........................................................................................................................................................................................................................................................................................................................GTGGAT-TAGCAGCAACGTTTACGGAT.................2611.0010000100
..............................................................................................................................................................................................................................................................................................................................................ACGGATCCCTGCCCCCAGGA...2011.0011000000
................................................................................................................................................................................................................................................................................................................................TAGCAGCAACGTTTACGG...................1811.0010000100
....................AATCCCT-TGGAGCTTTGGTAGCTTTC-CAC..................................................................................................................................................................................................................................................................................................................2911.0010000100
..................................................................................................................................................................................................................................................................................................................................................ATCCCTGCCCCCAGGAGCT1911.0011000000
..............................................................................................................................................................................................................................................................................................................GCAGACTACACGTGGAT-TAGCAG...............................2311.0010000100
.........................................................................................................................................................................................................................................................................................................................................CGTTTACGGATCCCTGCCCCCAGGA...2511.0011000000
....................................................................................................................................................................................................................................................................................................................................AGCAACGTTTACGGATCCCTGCCCCCAGG....2911.0011000000
.................................................................................................................................................................................................................................................................................................................GACTACACGTGGAT-TAGCAGCAA............................2311.0010000100
................................................................................................................................................................................................................................................................................................................AGACTACACGTGGAT-TAGCA................................2011.0010000100
...................................................................................................................................................................................................................................................................................................................CTACACGTGGAT-TAGCAGCA.............................2011.0010000100
.........................................................................................................................................................................................................................................................................................................................................CGTTTACGGATCCCTGCCCC........2011.0011000000
.................................................................................................................................................................................................................................................................................................................GACTACACGTGGAT-TAGCAGCA.............................2211.0011000000
..................................................................................................................................................................................................................................................................................................................ACTACACGTGGAT-TAGCAG...............................1911.0010000100
droSec2
CCG-AGCACCTGACAGCCGAAATCCCT-TGGAGCTTTGGTAGCTTTC-CATAGATCCAGCGAT--TCTACACCCTG-------ACAGATAAAA-G--A-----AACC------------------------------------TCTACTGTGGC---TGATTA---ATGGTGTACAGTTGGCCC--------------------------------------AA----GTT-CACT--TATCG-----CCTCT-GACCTTAT---ATA----------TAT---------TTTCTTCG-CTCTCAGACTACACCTGGAT-TAGCACCAACGTTTACGGATCCCTGCCCCCAGGAGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCACC..............................2115.0050320
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCACCAAC...........................2413.0031110
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCAC...............................2013.0030210
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCACCAAC...........................2212.0020020
................................................................................................................................................................................................................................................................................................................AGACTACACCTGGAT-TAGCACCAAC...........................2512.0020110
............................................................................................................................................................................................................................................................................................................................................TTACGGATCCCTGCCCCCAG.....2012.0020020
.............................................................................................................................................................................................................................................................................................................................AT-TAGCACCAACGTTTACGGA..................2112.0020011
.....................................................................................................................................................................................................................................................................................................................ACACCTGGAT-TAGCACCAAC...........................2012.0020020
.............................................................................................................................................................................................................................................................................................................................AT-TAGCACCAACGTTTACGGATCC...............2411.0010100
..................................................................................................................................................................................................................................................................................................................ACTACACCTGGAT-TAGCA................................1811.0010010
..................................................................................................................................................................................................................................................................................................................ACTACACCTGGAT-TAGCACCAACGTTTAC.....................2911.0010100
.................................................................................................................................................................................................................................................................................................................................AGCACCAACGTTTACGGATCCC..............2211.0010100
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCACCAA............................2111.0010100
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGC.................................1811.0010010
..........................................................................................................................................................................................................................................................................................................................................GTTTACGGATCCCTGCCCCC.......2011.0010010
..................................................................................................................................................................................................................................................................................................................ACTACACCTGGAT-TAGCACCAAC...........................2311.0010010
............................................................................................................................................................................................................................................................................................................................................TTACGGATCCCTGCCCCCAGGAGCC2511.0010010
................................................................................................................................................................................................................................................................................................................AGACTACACCTGGAT-TAGCAC...............................2111.0010100
............................................................................................................................................................................................................................................................................................................................GAT-TAGCACCAACGTTTACGG...................2111.0010010
............................................................................................................................................................................................................................................................................................................................................TTACGGATCCCTGCCCCCAGG....2111.0010010
.....................................................................................................................................................................................................................................................................................................................ACACCTGGAT-TAGCACCAACGTTTACGG...................2811.0010010
............................................................................................................................................................................................................................................................................................................................................TTACGGATCCCTGCCCCCAGGAGC.2411.0010010
..................................................................................................................................................................................................................................................................................................................ACTACACCTGGAT-TAGCACC..............................2011.0010100
..................................................................................................................................................................................................................................................................................................................................................ATCCCTGCCCCCAGGAGCC1911.0010010
.....................................................................................................................................................................................................................................................................................................................ACACCTGGAT-TAGCACCAACGTTTACG....................2711.0011000
...........................................................................................................................................................................................................................................................................................................................GGAT-TAGCACCAACGTTTACGGAT.................2411.0011000
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCAC...............................1811.0010010
.........................................................................................................................................................................................................................................................................................................................................CGTTTACGGATCCCTGCCCCCA......2211.0010010
............................................................................................................................................................................................................................................................................................................................GAT-TAGCACCAACGTTTACGGATCCC..............2611.0010010
.........................................................................................................................................................................................................................................................................................................................................CGTTTACGGATCCCTGCCCCCAGGA...2511.0010010
..........................................................................................................................................................................................................................................................................................................................................GTTTACGGATCCCTGCCCCCAG.....2211.0010100
..........................................................................................................................................................................................................................................................................................................................................GTTTACGGATCCCTGCCCC........1911.0010010
..........................................................................................................................................................................................................................................................................................................................................GTTTACGGATCCCTGCCCCCAGG....2311.0010010
.............................................................................................................................................................................................................................................................................................................................AT-TAGCACCAACGTTTACGGAT.................2211.0010100
droSim2
CCG-AGCACCTGACAGCCGAAATCCCT-TGGAGCTTTGGTAGCTTTC-CATAGATCCAGCGAT--TCTACACCCTG-------ACAGATAAAA-G--A-----AACC------------------------------------TCTACTGTGGC---TGATTA---ATGGTGTACAGTTGGCCC--------------------------------------AA----GTT-AACT--TATCG-----CCTCT-GACCTATATG--------------TAT---------TTTCTTCG-CTCTCAGACTACACCTGGAT-TAGCACCAACGTTTACGGATCCCTGCCCCCAGGAGCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................GAT-TAGCACCAACGTTTACGGAT.................2312.00200110000000000000
...................................................................................................................................................................................................................................................................................................................................................TCCCTGCCCCCAGGAGCC1811.00100010000000000000
......................................................................................GATAAAA-G--A-----AACC------------------------------------TCTACTG...............................................................................................................................................................................................................2011.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................CAACGTTTACGGATCCCTGCCCC........2311.00100100000000000000
................................................................................................................................................................................................................................................................................................................AGACTACACCTGGAT-TAGCACC..............................2211.00100010000000000000
...............................................................................................................................................................................................................................A----GTT-AACT--TATCG-----CCTCT-GACC...................................................................................................2211.00100100000000000000
................................................................................................................................................................................................................................................................................................................................TAGCACCAACGTTTACGGAT.................2011.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................GTTTACGGATCCCTGCCC.........1811.00100100000000000000
...................................TTGGTAGCTTTC-CATAGATCCAGCG........................................................................................................................................................................................................................................................................................................2511.00100100000000000000
......................................................................................................................................................................................CC--------------------------------------AA----GTT-AACT--TATCG-----CCTCT-GACCT..................................................................................................2611.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................GTTTACGGATCCCTGCCCCC.......2011.00100000000000100000
.......................................................................................................................................................................................................................................................................................................................................AACGTTTACGGATCCCTG............1811.00101000000000000000
dm3
CCG-CGCACCTGACAGCCGAAATCCCT-TGGAGCTTTGGTAGCTTTC-CATAGATCCAGCGAT--TCTACACCCTG-------ACAAATAAAA-G--ACAAAAAACC------------------------------------TCTACTGTGGC---TGATTA---ATGGTGTACAGTTGGCCCTCG-TTG-----GCC----------------------CAA----GTT-AACT--TATCG-----CCTCT-GACCTTGCTCTATAT------ATATAT---------TTTATTCG-CCCTCAGACTACACCTGGAT-TAGCACCAACGTTTACGGATCCCTGCCCCCAGGAGCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCACC..............................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCACCAACGT.........................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCACCAA............................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000101000000
.....................................................................................................................................................................................................................................................................................................................ACACCTGGAT-TAGCACCAAC...........................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCACCAA............................2313.0030000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................AGATCCAGCGAT--TCTACACCCTG-------AC................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCACCAACGT.........................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000
............................................................................................................................................................................................................................................................................................................................................TTACGGATCCCTGCCCCCAGGAGC.2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCACC..............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000
................................................................................................................................................................................................................................................................................................................AGACTACACCTGGAT-TAGC.................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
.............................................................................................................................................................................................................................................................................................................................AT-TAGCACCAACGTTTACGGATCC...............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................ACTACACCTGGAT-TAGCACCAACG..........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
............................................................................................................................................................................................................................................................................................................................................TTACGGATCCCTGCCCCCAGGAGCC2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................CAACGTTTACGGATCCCTGC...........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................ACTACACCTGGAT-TAGCACCAA............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCACCAACG..........................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................................................ACCAACGTTTACGGATCCCTGCCCC........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TACACCTGGAT-TAGCAC...............................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TACACCTGGAT-TAGCACCAA............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCA................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCAC...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CT-TGGAGCTTTGGTAGCTTTC-CATA.................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................CTACTGTGGC---TGATTA---ATGGT..........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GGC---TGATTA---ATGGTGTACA.....................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AACGTTTACGGATCCCTGCCCC........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TACGGATCCCTGCCCCCAG.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTTACGGATCCCTGCCCCCAGGAGCC2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TTACGGATCCCTGCCCCCA......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTTGGTAGCTTTC-CATAGATCCAGC.........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................ACAAAAAACC------------------------------------TCTACTGTGGC---TGA.....................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................ACGTTTACGGATCCCTGCCCCCAGGAGC.2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GCACCAACGTTTACGGATCCCTGCCCC........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CTCAGACTACACCTGGAT-TAGCACCAAC...........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCAA...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................................TACACCTGGAT-TAGCACCAAC...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................GTAGCTTTC-CATAGATCCAGCG........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................................................................ACTACACCTGGAT-TAGCAC...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................ACGGATCCCTGCCCCCAGGA...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GAAATCCCT-TGGAGCTTTG...............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCACCAACG..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................................................................................................................................................AT-TAGCACCAACGTTTACGGATCCCT.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCACCAAC...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................ATCCCTGCCCCCAGGAGCC1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................CACCTGGAT-TAGCACCAACGT.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................................................................................................................................................................TTTACGGATCCCTGCCCCCAGGAG..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................GACTACACCTGGAT-TAGCACCAAC...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TACGGATCCCTGCCCCCAGGAGC.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................................................................................TAGCACCAACGTTTACGGATCC...............2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CTACACCTGGAT-TAGCACCAACGTTTACG....................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................ACC------------------------------------TCTACTGTGGC---TGAT....................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CCTCT-GACCTTGCTCTAT..........................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
CTG-CTCACCTGACACCCGAAATCCCTTTGGAGCTTTGGAAGCTTTC-CATAGATCCAACTAGATTTCACACCCGG-------CTAGATAACGAAAA------TAG--ACAGAGTG-----------------GGGA-------------GGTC---TGATTA---ATGGGGTACAGTTGGGCCTCG-TAGT-----------------------------TAA----GTG-A-----TATCG-----AATCT-AACTTTGTTCCAAAT------ATTCA-----------CTCTTCG-CCTGCAGAATACACCTGGAT-TAGCTCGAATGTTTATGGTTCTCTGCCACCTGGCGCCSizeHit CountTotal NormTotal
No Reads
droBia1
CCG-CTCACCTGACAGCCCAAATCCCT-GGGAGCTTTGGAAGCTTTC-CGCAGATCCGGCGAT--ATCACACCCGG-------CTAGATAAC-AAAA------CAG--ACAGAGTG----------------------------------GGTC---TGATTA---ATGGGGTACAGTTGGGCCTCC-TAGT-----------------------------TGA----GCT-AACC--CATCGA--CACATCT-AACCTTGTTCCACTT------AC-------------ACCACTCA-CTTGCAGACTACACCTGGAT-TAGCTCGAACGTCTACGAAGGCCTGCCACCTGGCGCCSizeHit CountTotal NormTotal
No Reads
droTak1
CCG-CTCACCTGACAGCCCAAATCCCT-TGGAGCTTTGGAAGCTTTC-CATAGATCCGCCGAT--TTCACACCCGG-------CCAGATAAG-GAAA------TAG--ACAGAGTG----------------------------------TTTC---TGATTAGTG-TGGGGTACAGTTGGGCCTCG-TAGT-----------------------------TGG----GCT-AACT--TATCGTTTCGTATCT-GACCTTGTTCCAAAT------AT-------------T---CTTG-CCCACAGACTACACCTGGAT-CAGCACCAACGTCTACGGAGCCCTGCCACCTGGCGCCSizeHit CountTotal NormTotal
No Reads
droEle1
CCG-CTCACCTGACAGCCGAAATCCCC-TGGAGCTTTGGAAGCTTTC-CATAGATCCGCCGAT--TTCACACCTGG-------TCAGATAAC-GAAA------TAG--ACAGAGTG----------------------------------GGTC---TGATTATATATG-AGTACAGTTGGGCCACACCAGT-----------------------------TA-------A-AACT--TATCG-----CCTCT-GACCTTGCTCCAAAT------AT-------------TCCACTCGTTTTGCAGACTACACCTGGAT-TAGCACCAATGTCTACGAATCCCTGCCACCGGGTGCCSizeHit CountTotal NormTotal
No Reads
droRho1
TTG-CTCACCTGACAGCCGAAATCCCC-TGGAGCTTTGGAAGCTTGC-CGACGATCCAACGAT--TTCACTAGCTAAATAAATATAGATAAG-AAAA------TAG--ACAGAGTG----------------------------------GTTC---AAGTTA---ATGG-GTACAGTTGGTCGCCA-A-CC---------------------A-------TTT----G-T-AACT--TATCG-----CCACT-GACCTTGCTCCAAAT------AT-------------TCCATTCC-CTTGCAGACTACACCTGGAT-TAGCACCAACGTTTACGATGCCCTGCCAGCGGGAGCCSizeHit CountTotal NormTotal
No Reads
droFic1
CAGGCTCACCTGACAGTTCAAATCCCC-CGGAGCTTTGGAAGCTTTC-CATAGATCCGGCGAT--ATTTCACCCCA-------ACTGATAAG-AAAA------TAG--ACAGAGTG----------------------------------GGGC-TGCGATTAGGAAAG-GGTACAGTTGGGCCGCG-AAGT------------------------------------GTT-AACT--TATCG-----CCTTTCGACCTTGTTCCAAAT------AC----------------------TCCACAGACTACACCTGGAT-TAGCGCCAATGTCTACGGACCCCTGCCGCCCGGAGCCSizeHit CountTotal NormTotal
No Reads
droKik1
AC----CACCTGACAGCCGTAATCCCT-TGGAGCTTTGGAAGCTTTC-CACAGATCTGGCGAT--TTCACACCGGG------AATAGATAAT-AAAA------CAG--ACTGAG-------------------------------------------TGATTA---ATGG-GTACAGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CAG-TCAACTTGACAGTTGAAATCCCT-TGAAGCTTTCCTAGCTTTC-CA--------GCCAA--ATCT-CCCCCG-------AAAGATAATG-G--CTAAAATAT--ATAGACCC----------------------------------CGGCTAGTGATTA---ATGG-GTACAGTTGCGACCCA-AAAA-----------------------------AAA----GTG-AATA--TAC-T-----TAACT-AACCTTGCCCTATTTCTTGTGGTTTT----------TGTTGTTT-CTTGTAGACTACGTTTGGAT-TAGCACCAATGTCTATGGAGGTCTGCCTGGTGGCGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................CTACGTTTGGAT-TAGCACC..............................1915.005032000
...................................................................................................................................................................................................................................................................................................................CTACGTTTGGAT-TAGCACCAAT...........................2214.004101020
............................................................................................................................................................................................................................................................................................................................................CTATGGAGGTCTGCCTGGTGGC...2213.003021000
..........................................................................................................................................................................................................................................................................................................................................GTCTATGGAGGTCTGCCTGGTGGC...2412.002110000
...................................................................................................................................................................................................................................................................................................................CTACGTTTGGAT-TAGCACCA.............................2012.002000020
.................................................................................................................................................................................................................................................................................................................GACTACGTTTGGAT-TAGCACC..............................2112.002010010
.................................................................ATCT-CCCCCG-------AAAGATAATG-G--C...................................................................................................................................................................................................................................................................2212.002011000
...........................................................................................................................................................................................................................................................................................................................................TCTATGGAGGTCTGCCTGGTGGC...2311.001010000
...........................................................................................................................................................................................................................................................................................................................GGAT-TAGCACCAATGTCTATGGAGGTC..............2711.001010000
............................................................................................................................................................................................................................................................................................................................................CTATGGAGGTCTGCCTGGTGG....2111.001010000
..........................................................................................................................................................................................................................................................................................................................................GTCTATGGAGGTCTGCCTGGTGG....2311.001000010
.................................................................................................................................................................................................................................................................................................................GACTACGTTTGGAT-TAGCACCAA............................2311.001000010
.................................................................................................................................................................................................................................................................................................................................AGCACCAATGTCTATGGAGGTC..............2211.001100000
..........................................................................................................................................................................................................................................................................................................................................GTCTATGGAGGTCTGCCTGGTGGCGCC2711.001100000
..................................................................................................................................................................................................................................................................................................................ACTACGTTTGGAT-TAGCACC..............................2011.001010000
.............................................TC-CA--------GCCAA--ATCT-CCCCCG-------AAA...............................................................................................................................................................................................................................................................................2211.001010000
............................................................................................................................................................................................................................................................................................................................................CTATGGAGGTCTGCCTGGTGGCG..2311.001001000
.......................................................................................................................................................................................................................................................................................................................................AATGTCTATGGAGGTCTGCCTGGTGGCGC.2911.001010000
............................................................................................................................................................................................................................................................................................................................GAT-TAGCACCAATGTCTATGGAGGT...............2511.001010000
.............................................................................................................................................................................................................................................................................................................................................TATGGAGGTCTGCCTGGTGGCGCC2411.001010000
..................................................................................................................................................................................................................................................................................................................ACTACGTTTGGAT-TAGCACCAA............................2211.001001000
.........................................................................................................................................................................................................................................................................................................................TTGGAT-TAGCACCAATGTCTATG....................2311.001100000
.................................................................................................................................................................................................................................................................................................................................AGCACCAATGTCTATGGAGGTCTGC...........2511.001010000
..........................................................................................................................................................................................................................................................................................................................TGGAT-TAGCACCAATGTCT.......................1911.001010000
............................................................................................................................................................................................................................................................................................................................................CTATGGAGGTCTGCCTGGC......1911.001010000
............................................................................................................................................................................................................................................................................................................................GAT-TAGCACCAATGTCTATGGAGGTCT.............2711.001010000
..............................................................................................................................................................................................................................................................................................................................................ATGGAGGTCTGCCTGGTGGCGC.2211.001000010
.................................................................................................................................................................................................................................................................................................................GACTACGTTTGGAT-TAGCACCAATGT.........................2611.001000010
...................................................................................................................................................................................................................................................................................................................................CACCAATGTCTATGGAGGTC..............2011.001010000
.................................................................................................................................................................................................................................................................................................................................................GAGGTCTGCCTGGTGGCGCC2011.001010000
.................................................................................................................................................................................................................................................................................................................GACTACGTTTGGAT-TAGCAC...............................2011.001100000
.......................................................................................................................................................................................................................................................................................................................................AATGTCTATGGAGGTCTGCCTGGT......2411.001010000
....................................................................................................................................................................................................................................................................................................................................ACCAATGTCTATGGAGGTC..............1911.001000001
....................................................................................................................................................................................................................................................................................................................................ACCAATGTCTATGGAGGTCT.............2011.001010000
....................................................................................................................................................................................................................................................................................................................TACGTTTGGAT-TAGCACCA.............................1911.001100000
.................................................................................................................................................................................................................................................................................................................................AGCACCAATGTCTATGGA..................1811.001100000
................................................................................................................................................................................................................................................................................................................AGACTACGTTTGGAT-TAGCAC...............................2111.001010000
...................................................................................................................................................................................................................................................................................................................CTACGTTTGGAT-TAGCACCAATGTCT.......................2611.001010000
.................................................................................................................................................................................................................................................................................................................................AGCACCAATGTCTATGGAGGTCTGCCTG........2811.001000010
.........................................................................................................................................................................................................................................................................................................................TTGGAT-TAGCACCAATGTCTAT.....................2211.001000010
..........................................................................................................................................................................................................................................................................................................................................GTCTATGGAGGTCTGCCTGGTG.....2211.001100000
............................................................................................................................................................................................................................................................................................................................................CTATGGAGGTCTGCCTGGTG.....2011.001100000
............................................................................................................................................................................................................................................................................................................................................CTATGGAGGTCTGCCTGGT......1911.001010000
..............................................................................................................................................................................................................................................................................................................................................ATGGAGGTCTGCCTGGTGGC...2011.001000010
..........................................................................................................................................................................................................................................................................................................................................GTCTATGGAGGTCTGCCTGGT......2111.001010000
.................................................................................................................................................................................................................................................................................................................GACTACGTTTGGAT-TAGCACCAATGC.........................2611.001010000
................................................................................................................................................................................................................................................................................................................................................GGAGGTCTGCCTGGTGGC...1811.001010000
droBip1
CAG-TTAACTTGACAGTTGAAATCCCT-TGAAGCTTTGGTAGCTTTC-CA--------GC--T--TAATCTCCTCG-------AAAGATAATA-G--CTAAAATATATACAGACTT-----------------------------------GGCTAGTGATTA---ATGG-GTACAGTTGCGGCCCA-AAAA-----------------------------AAAATATG-TGGATATAC---T-----TAACT-AACCTTGGTCTATTT-----------------------TTTTCGTCCTTTAGACTACGTTTGGAT-TAGCAGCAATGTCTATGGAGGTCTGCCCGGTGGCGCCSizeHit CountTotal NormTotal
No Reads
dp5
AAG-TTCAGCTGACAGTGAAAATCCCC-TGGAGCTTCGGTGGCTTTCTCATAGATCTTACGAT--TTCACACCCCG-------TGAGATAACA-G--ACCA-----------AGTTCTTGTTATTAATGTGCGAGGGGTGTGGTGTAGAGTGGC---AGGCCG---ACTGTACACA-TCAGCAGTCA-AAGAACCGGGCTGGGCTGGGCTGTAATCAGTAAAATATATT-TAGACAAACGTCA-----GGTCT-AACCTTGGTCATCAT------TT-----------------TCCC-TCTGCAGACCACACCTGGAT-CAGCCGCAACGTCTTCGACCAGCTGCCGCCCTGCGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................CACCTGGAT-CAGCCGCAACGT.........................2117.0071600000000
...................................................................................................................................................................................................................................................................................................................CCACACCTGGAT-CAGCCGC..............................1915.0050500000000
............................................................................................................................................................................................................................................................................................................................GAT-CAGCCGCAACGTCTTC.....................1914.0040400000000
............................................................................................................................................................................................................................................................................................................................................CTTCGACCAGCTGCCGCCCTGCGC.2413.0030210000000
.....................................................................................................................................................................................................................................................................................................................ACACCTGGAT-CAGCCGCAACGT.........................2213.0030300000000
......................................................................................................................................................................................................................................................................................................................CACCTGGAT-CAGCCGCAAC...........................1913.0030300000000
.....................................................................................................................................................................................................................................................................................................................................GCAACGTCTTCGACCAGCTGC...........2113.0030300000000
.......................................................................................................................................................................................................................................................................................................................................AACGTCTTCGACCAGCTGC...........1913.0030300000000
..................................................................................................................................................................................................................................................................................................................................GCCGCAACGTCTTCGACCAGCT.............2212.0020001100000
.................................................................................................................................................................................................................................................................................................................GACCACACCTGGAT-CAGCC................................1912.0020200000000
.....................................................................................................................................................................................................................................................................................................................................GCAACGTCTTCGACCAGCT.............1912.0020200000000
.................................................................................................................................................................................................................................................................................................................................AGCCGCAACGTCTTCGACCAGCT.............2312.0020200000000
....................................................................................................................................................................................................................................................................................................................CACACCTGGAT-CAGCCGCAAC...........................2112.0020200000000
................................................................................................................................................................................................................................................................................................................................CAGCCGCAACGTCTTCGACCAGC..............2312.0020200000000
.................................................................................................................................................................................................................................................................................................................GACCACACCTGGAT-CAGCCGCAACGT.........................2612.0020200000000
................................................................................................................................................................................................................................................................................................................................................GACCAGCTGCCGCCCTGCGC.2012.0020200000000
.......................................................................................................................................................................................................................................................................................................................................AACGTCTTCGACCAGCTGCCGCCCTGCGC.2912.0020200000000
......................................................................................................................................................................................................................................................................................................................CACCTGGAT-CAGCCGCAACGTCTTCGACC.................2912.0020110000000
.................................................................................................................................................................................................................................................................................................................GACCACACCTGGAT-CAGCCGC..............................2112.0020200000000
....................................................................................................................................................................................................................................................................................................................................CGCAACGTCTTCGACCAGCT.............2012.0020100100000
...........................................................................................................................................................................................................................................................................................................................GGAT-CAGCCGCAACGTCTTC.....................2011.0010100000000
...................................................................................................................................................................................................................................................................................................................CCACACCTGGAT-CAGCCGCAACGTCTTC.....................2811.0010100000000
.................................................................................................................................................................................................................................................................................................................GACCACACCTGGAT-CAGCCG...............................2011.0010100000000
....................................................................................................................................................................................................................................................................................................................CACACCTGGAT-CAGCCGCAACGT.........................2311.0010100000000
...................................................................................................................................................................................................................................................................................................................CCACACCTGGAT-CAGCCGCAACGTCTT......................2711.0010100000000
.....................................................................................................................................................................................................................................................................................................................................GCAACGTCTTCGACCAGCTGCC..........2211.0010100000000
.............................................................................................................................................................................................................................................................................................................................AT-CAGCCGCAACGTCTTC.....................1811.0010100000000
................................................................................................................................................................................................................................................................................................................................CAGCCGCAACGTCTTCGACCAGCTGC...........2611.0010010000000
............................................................................................................................................................................................AAGAACCGGGCTGGGCTGGGCT...................................................................................................................................................2211.0010100000000
...............................................................................................................................................................................................................................................................................................................................................CGACCAGCTGCCGCCCTGC...1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................ACCTGGAT-CAGCCGCAACGT.........................2011.0010100000000
................................................................................................................................................................................................................................................................................................................................CAGCCGCAACGTCTTCGA...................1811.0010100000000
............................................................................................................................................................................................................................................................................................................................................CTTCGACCAGCTGCCGCCCT.....2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................TCGACCAGCTGCCGCCCTGCGC.2211.0010100000000
..................................................................................................................................................................................................................................................................................................................................GCCGCAACGTCTTCGACCAGCTGC...........2411.0010100000000
.................................................................................................................................................................................................................................................................................................................................AGCCGCAACGTCTTCGACCAGCTGC...........2511.0010100000000
......................................................................................................................................................................................................................................................................................................................................CAACGTCTTCGACCAGCTGC...........2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................TCTTCGACCAGCTGCCGCCCTG....2211.0010010000000
....................................................................................................................................................................................................................................................................................................................................CGCAACGTCTTCGACCAGCTGCC..........2311.0010100000000
..........................................................................................................................................................................................................................................................................................................................................GTCTTCGACCAGCTGCCGCCCTGC...2411.0010100000000
...................................................................................................................................................................................................................................................................................................................CCACACCTGGAT-CAGCCGCAACGT.........................2411.0010100000000
......................................................................................................................................................................................................................................................................................................................CACCTGGAT-CAGCCGCAACGTCTT......................2411.0010100000000
.............................................................................................................................................................................................................................................................................................................................................TTCGACCAGCTGCCGCCCT.....1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................GTCTTCGACCAGCTGCCGCCCTGCGC.2611.0010100000000
...........................................................................................................................................................................................................................................................................................................................................TCTTCGACCAGCTGCCGCCCT.....2111.0010100000000
.......................................................CTTACGAT--TTCACACCCCG-------T.................................................................................................................................................................................................................................................................................2011.0010010000000
...........................................................................................................................................................................................................................................................................................................................GGAT-CAGCCGCAACGTCTTCGACC.................2411.0010100000000
...........................................................................................................................................................................................................................................................................................................................GGAT-CAGCCGCAACGTCTTCGACCAGCT.............2811.0010100000000
.......................................................................................................................................................................................................................................................................................................................................AACGTCTTCGACCAGCTGCCGCCCTGC...2711.0010100000000
........................................................................................................................................................................................................................................................................................................................................ACGTCTTCGACCAGCTGCCGCC.......2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................................AACGTCTTCGACCAGCTGCCGCCCTG....2611.0010100000000
............................................................................................................................................................................................................................................................................................................................................CTTCGACCAGCTGCCGCCCTGCGCC2511.0010000001000
.................................................................................................................................................................................................................................................................................................................GACCACACCTGGAT-CAGCCGCAACG..........................2511.0010100000000
..................................................................................................................................................................................................................................................................................................................ACCACACCTGGAT-CAGCCGC..............................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................AT-CAGCCGCAACGTCTTCGACC.................2211.0010100000000
.................................................................................................................................................................................................................................................................................................................................AGCCGCAACGTCTTCGACCAGCTG............2411.0010000100000
.............................................................................................................................................................................................................................................................................................................................AT-CAGCCGCAACGTCTTCGA...................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................GTCTTCGACCAGCTGCCGCC.......2011.0010010000000
droPer2
AAG-TTCAGCTGACAGTGAAAATCCCC-TGGAGCTTCGGTGGCTTTCTCATAGATCTTACGAT--TTCACACCCCG-------TGAGATAACA-G--ACCA-----------AGTTCTTGTTATTAATGTGCGAGGGGTGTGGTGTGGTGTGGC---AGGCCG---ACTGTACACA-TCAGCAGTCA-AAGCACCGGGCTGGGCTGAGCTTTAATCAGTAAAATATATT-TTGACAAACGTCA-----GGTCT-AACCTTGGTCCACAT------TT-----------------TCCC-TCTGCAGACCACACCTGGAT-CAGCCGCAACGTCTTCGACCAGCTGCCGCCCTGCGCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................CAGCCGCAACGTCTTCGAC..................1913.003300000
............................................................................................................................................................................................................................................................................................................................GAT-CAGCCGCAACGTCTTCGACC.................2312.002200000
....................................................................................................................................................................................................................................................................................................................................CGCAACGTCTTCGACCAGCTGC...........2212.002200000
.....................................................................................................................................................................................................................................................................................................................................GCAACGTCTTCGACCAGCTGC...........2112.002200000
................................................................................................................................................................................................................................................................................................................................CAGCCGCAACGTCTTCGACCAGC..............2312.002020000
......................................................................................................................................................................................AGTCA-AAGCACCGGGCTGGGCT........................................................................................................................................................2212.002200000
............................................................................................................................................................................................................................................................................................................................................CTTCGACCAGCTGCCGCCCTGCGCC2512.002200000
................................................................................................................................................................................................................................................................................................................................CAGCCGCAACGTCTTCGACCA................2112.002200000
............................................................................................................................................................................................................................................................................................................................................CTTCGACCAGCTGCCGCCCTG....2112.002200000
...................................................................................................................................................................................................................................................................................................................CCACACCTGGAT-CAGCCGCAACGT.........................2412.002011000
......................................................................................................................................................................................................................................................................................................................................CAACGTCTTCGACCAGCT.............1812.002200000
.............................................................................................................................................................................................................................................................................................................................AT-CAGCCGCAACGTCTTCGAC..................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................GTCTTCGACCAGCTGCCGCCCTGCGCC2711.001010000
........................................................................................................................................................................................................................................................................................................................................ACGTCTTCGACCAGCTGCCGCCCTGC...2611.001010000
...........................................................................................................................................................................................................................................................................................................................GGAT-CAGCCGCAACGTCTT......................1911.001010000
...................................................................................................................................................................................................................................................................................................................CCACACCTGGAT-CAGCCGCAAC...........................2211.001010000
......................................................................................................................................................................................................................................................................................................................CACCTGGAT-CAGCCGCAAC...........................1911.001010000
....................................................................................................................................................................................................................................................................................................................................CGCAACGTCTTCGACCAGCT.............2011.001010000
..............................................................................................................................................................................................GCACCGGGCTGGGCTGAGCTTTAATCAGT..........................................................................................................................................2911.001100000
.................................................................................................................................................................................................................................................................................................................GACCACACCTGGAT-CAGCC................................1911.001010000
.........................................................................................................................................................................................CA-AAGCACCGGGCTGGGCTGAGCTT..................................................................................................................................................2511.001100000
.................................................................................................................................................................................................................................................................................................................GACCACACCTGGAT-CAGC.................................1811.001010000
.........................................................................................................................................................................................................................................................................................................................................CGTCTTCGACCAGCTGCCGCCCTG....2411.001001000
................................................................................................................................................................................................................................................................................................................................CAGCCGCAACGTCTTCGACCAGCTGC...........2611.001100000
......................................................................................................................................................................................AGTCA-AAGCACCGGGCTGGGCC........................................................................................................................................................2211.001100000
................................................................................................................................................................................................................................................................................................................................CAGCCGCAACGTCTTCGACC.................2011.001100000
...................................................................................................................................................................................................................................................................................................................CCACACCTGGAT-CAGCCGC..............................1911.001010000
..........................................................................................................................................................................................................................................................................................................................................GTCTTCGACCAGCTGCCGCCCT.....2211.001100000
..........................................................................................................................ATTAATGTGCGAGGGGTGTGGTGTGGT................................................................................................................................................................................................................2711.001000001
.............................................................................................................................................................................................................................................................................................................................................TTCGACCAGCTGCCGCCCTG....2011.001100000
................................................................................................................................................................................................................................................................................................................................CAGCCGCAACGTCTTCGACCAGCTGG...........2611.001100000
......................................................................................................................................................................................................................................................................................................................CACCTGGAT-CAGCCGCAACG..........................2011.001010000
.................................................................................................................................................................................................................................................................................................................................AGCCGCAACGTCTTCGACCAGC..............2211.001010000
............................................................................................................................................................................................................................................................................................................................................CTTCGACCAGCTGCCGCCCTGCGC.2411.001010000
.......................................................................................................................................................................................GTCA-AAGCACCGGGCTGGGCTGAGC....................................................................................................................................................2511.001000001
.................................................................................................................................................................................................................................................................................................................................AGCCGCAACGTCTTCGACC.................1911.001100000
.................GAAAATCCCC-TGGAGCTTCGGTGGCTTT.......................................................................................................................................................................................................................................................................................................................2811.001000001
....................................................................................................................................................................................................................................................................................................................CACACCTGGAT-CAGCCGC..............................1811.001010000
.....................................................................................................................................................................................................................................................................................................................ACACCTGGAT-CAGCCGCAACGTCTT......................2511.001010000
.....................................................................................................................................................................................................................................................................................................................ACACCTGGAT-CAGCCGCAACGT.........................2211.001000001
............................................................................................................................................................................................................................................................................................................................GAT-CAGCCGCAACGTCTTCGA...................2111.001010000
....................................................................................................................................................................................................................................................................................................................................CGCAACGTCTTCGACCAGC..............1911.001100000
..................................................................................................................................................................................................................................................................................................................................GCCGCAACGTCTTCGACC.................1811.001100000
.......................................................................................................................................................................................................................................................................................................................................AACGTCTTCGACCAGCTGCC..........2011.001010000
...........................................................................................................................................................................................................................................................................................................................................TCTTCGACCAGCTGCCGCCCTG....2211.001100000
.........................................................................................................................................................................................................................................................................................................................................CGTCTTCGACCAGCTGCC..........1811.001100000
......................................................................................................................................................................................................................................................................................................................................CAACGTCTTCGACCAGCTGCCGCCCG.....2611.001100000
.......................................................................................................................................................................................................................................................................................................................................AACGTCTTCGACCAGCTGCCGCCCTGCGC.2911.001010000
.....................................................................................................................................................................................................................................................................................................................................GCAACGTCTTCGACCAGC..............1811.001010000
..........................................................................................................................ATTAATGTGCGAGGGGTGT........................................................................................................................................................................................................................1911.001001000
............................................................................................................................................................................................................................................................................................................................GAT-CAGCCGCAACGTCTTCGACCAGCT.............2711.001010000
......................................................................................................................................................................................................................................................................................................................................CAACGTCTTCGACCAGCTGCC..........2111.001100000
.............................................................................................................................................................................................................................................................................................................................AT-CAGCCGCAACGTCTTCGACC.................2211.001100000
droWil2
AC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--TATCG-----GTCCC-TCTCTCTCTCTCTC----------TGC---------TCTCTT-T-GTTGCAGAACACACCTGGGT-GCACTCGACTCCATATGCCGCTCTGCCTCCGTACGCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................ATGCCGCTCTGCCTCCGTAC...2012.00201100
........................................................................................................................................................................................................................................................................................................................................CTCCATATGCCGCTCTGCCTC........2112.00202000
.....................................................................................................................................................................................................................................................................................................................................CGACTCCATATGCCGCTCTGCCTCC.......2511.00101000
..............................................................................................................................................................................................................................................................................................................................................ATGCCGCTCTGCCTCCGTACGCT2311.00110000
.................................................................................................................................................................................................................................................................................................................................CACTCGACTCCATATGCCGC................2011.00101000
..................................................................................................................................................................................................................................................................................................................................ACTCGACTCCATATGCCGCTCTGCCTCC.......2811.00101000
..................................................................................................................................................................................................................................................................................................................AACACACCTGGGT-GCACTC...............................1911.00101000
..................................................................................................................................................................................................................................................................................................................AACACACCTGGGT-GCACTCGACTCC.........................2511.00101000
...................................................................................................................................................................................................................................................................................................................ACACACCTGGGT-GCACTCGACTCC.........................2411.00101000
.................................................................................................................................................................................................................................................................................................................................CACTCGACTCCATATGCCGCTCT.............2311.00101000
.................................................................................................................................................................................................................................................................CTCTCTCTCTC----------TGC---------TCTCTT-T-GTTGCAG...................................................2811.00101000
....................................................................................................................................................................................................................................................................................................................................TCGACTCCATATGCCGCTCTGCCT.........2411.00101000
..............................................................................................................................................................................................................................................................TCTCTCTCTCTCTC----------TGC---------TCT................................................................20100.10110000
droVir3
CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGATCACACTTGGGT-TGCCCGCAATGTGTACGATGCACTGCCGCCATTTGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................CACACTTGGGT-TGCCCGCAATGT.........................2313.003001000000000000000000000000002000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AATGTGTACGATGCACTGCCGCC.......2312.002000100000000000000000000000000100000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CCCGCAATGTGTACGATGCACT.............2212.002000000000000000000000000000002000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TTGGGT-TGCCCGCAATGTGTACGATG.................2612.002001000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................GATCACACTTGGGT-TGCCCGC..............................2112.002001000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................ATGTGTACGATGCACTGCCGCC.......2212.002000000010000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CTTGGGT-TGCCCGCAATGTGTACG....................2412.002000000000000000000001000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TGCCCGCAATGTGTACGATGCA...............2211.001000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TGTACGATGCACTGCCGCCATTTG..2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GTGTACGATGCACTGCCGCC.......2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TTGGGT-TGCCCGCAATGTGTAC.....................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GT-TGCCCGCAATGTGTACGATGCACT.............2611.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CAATGTGTACGATGCACTGCCGC........2311.001000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CACACTTGGGT-TGCCCGCAAT...........................2111.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AATGTGTACGATGCACTGCCGCCATT....2611.001000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AATGTGTACGATGCACTGCC..........2011.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TGGGT-TGCCCGCAATGTGTACG....................2211.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................T-TGCCCGCAATGTGTACGATG.................2111.001000000000000000000000000000000100000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GT-TGCCCGCAATGTGTACGATGCACTGC...........2811.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AATGTGTACGATGCACTGCCG.........2111.001000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TGGGT-TGCCCGCAATGTGTA......................2011.001000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CAATGTGTACGATGCACTGC...........2011.001000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GCAATGTGTACGATGCACTGC...........2111.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GGGT-TGCCCGCAATGTGTACGAT..................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CGCAATGTGTACGATGCACTGCCGCC.......2611.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AATGTGTACGATGCACTGCCGCCATTTG..2811.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GATGCACTGCCGCCATTTGC.2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GTGTACGATGCACTGCCGC........1911.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GTGTACGATGCACTGCCGCCA......2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TGCCCGCAATGTGTACGATG.................2011.001000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CCCGCAATGTGTACGATGC................1911.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GGGT-TGCCCGCAATGTGTACGA...................2211.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC---------TTTACCTT-TTTCTAGAACACACCTGGAT-TGCCTGCAATGTTTACGAAGCTCTGCCGCCATTCGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................ACACACCTGGAT-TGCCTGCAATGT.........................2412.002200000
..........................................................................................................................................................................................................................................................................................................................................GTTTACGAAGCTCTGCCGC........1912.002100001
.................................................................................................................................................................................................................................................................................................................GAACACACCTGGAT-TGCCTGCAATGTTT.......................2811.001100000
............................................................................................................................................................................................................................................................................................................................GAT-TGCCTGCAATGTTTACGA...................2111.001100000
..............................................................................................................................................................................................................................................................................................................................T-TGCCTGCAATGTTTACGAAGCTCTGCC..........2811.001100000
..................................................................................................................................................................................................................................................................................................................AACACACCTGGAT-TGCCTGCA.............................2111.001100000
...................................................................................................................................................................................................................................................................................................................ACACACCTGGAT-TGCCTGCAATG..........................2311.001100000
..................................................................................................................................................................................................................................................................................................................................................AGCTCTGCCGCCATTCGCC1911.001100000
.....................................................................................................................................................................................................................................................................................................................ACACCTGGAT-TGCCTGCAAT...........................2011.001100000
..................................................................................................................................................................................................................................................................................................................................CCTGCAATGTTTACGAAGCTCTGCC..........2511.001100000
..........................................................................................................................................................................................................................................................................................................................................GTTTACGAAGCTCTGCCGCC.......2011.001001000
.........................................................................................................................................................................................................................................................................................................................................TGTTTACGAAGCTCTGCCGCC.......2111.001100000
.................................................................................................................................................................................................................................................................................................................GAACACACCTGGAT-TGCCTGCAATGT.........................2611.001100000
droGri2
TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-TTTACAGCTTACAAATGGGTGCAGTCCTCGGGCGTATGCATCGCTGCCACAACATGCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:39 PM