ID:

dya_485

 Coordinate:

2R:7456621-7456771 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.2 -21.9 -21.6 -21.6

Flybase annnotation

CDS [Dyak\GE13346-cds]; exon [dyak_GLEANR_13566:4]; intron [Dyak\GE13346-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGACCCACCCAACTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGCGTGGGCTTGATACCCTGTAATGGCTGCTCGAAGTCGCAAAGTGCTCTGATGGGCTGGGCTCTTTGTTTGCTCGGCCTTTATCAATGGCTATATAAATATAGAATATTTTGAACTGCAAATACACACGATTTTTGCCCCTTATGTAATGTGACATTTCCGCTTTTCGCTTTTGATTTTGACAACTTTTTGCGCAATTTTATG
*****************************************************************************************...........((((.(((.((..(((((((..((((.........)))).........................))))))).....)).))).)))).*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V120
male body		 M043
female body
 V058
head
 M026
head
....................GTTGTGGAGGCATGTGTCTGC.................................................................................................................................................................................................................. 21 0 1 2.00 2 1 1 0 0
.........................................................................................AGTGCTCTGATGGGCTGGG............................................................................................................................................... 19 0 1 2.00 2 0 2 0 0
............................GGCATGTGTCTGCACCTCCCGCGT....................................................................................................................................................................................................... 24 0 1 2.00 2 0 2 0 0
........................................................................................................................................................................ATACACACGATTTTTGCCCC............................................................... 20 0 1 1.00 1 0 1 0 0
....................................................................................CGCAAAGTGCTCTGATGGGCTGGG............................................................................................................................................... 24 0 1 1.00 1 0 1 0 0
......................................................................................CAAAGTGCTCTGATGGGCTGGG............................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
...........................................................ATACCCTGTAATGGCTGCTCGAAGT....................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
....................................................................................................GGGCTGGGTTCTTTGTTTGCTC................................................................................................................................. 22 1 1 1.00 1 0 1 0 0
............CTGGTATGGTTGTGGAGGC............................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0
.......................................................CTTGATACCCTGTAATGGCTGCTCGAA......................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0
.........CAACTGGTATGGTTGTGGAGGCAT.......................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0
.............................................................................................CTCTGATGGGCTGGGCTCTTT......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
................................TGTGTCTGCACCTCCCGCGT....................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................GAACTGCAAATACACACGATTTT..................................................................... 23 0 1 1.00 1 0 1 0 0
.....................................................................................GCAAAGTGCTCTGATGGGCTGGGC.............................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
...................................................................................................TGGGCTGGGCTCTTTGTTTGCTCGG............................................................................................................................... 25 0 1 1.00 1 0 0 0 1
...........................AGGCATGTGTCTGCACCTCCC........................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
......................................................................................................................................................................AAATACACACGATTTTTGCCCCTTA............................................................ 25 0 1 1.00 1 0 1 0 0
...................................GTCTGCACCTCCCGCGTGGGCTTG................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0
............CTGGTATGGTTGTGGAGGCATGTG....................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
...............GTATGGTTGTGGAGGCATGTGTC..................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
...................................................................................TCGCAGCGTGCTTTGATGGGCT.................................................................................................................................................. 22 3 1 1.00 1 0 0 1 0
...........................................................................GCTCGAAGTCGCAAAGTGCTCTGATGGG.................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................ATACACACGATTTTTGCCC................................................................ 19 0 1 1.00 1 0 1 0 0
.................................................................................................GATGGGCTGGGCTCTTTGTTTG.................................................................................................................................... 22 0 1 1.00 1 0 1 0 0
............CTGGTATGGTTGTGGAGGCATGTGT...................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
..........................................................................TGCTCGAAGTCGCAAAGTGCTCTGATGG..................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................TTTGCCCCTTATGTAATGTGAAAA............................................... 24 2 1 1.00 1 1 0 0 0
...........................................................................GCTCGAAGTCGCAAAGTGCTCTGATG...................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
..............................................................................CGAAGTCGCAAAGTGCTCTGATGG..................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
...................................GTCTGCACCTCCCGCGTGG..................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0
..............................................................................CGAAGTCGCAAAGTGCTCTGATGGG.................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0
.............................................CCCGCGTGGGCTTGATACCCTGT....................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0
.................................................................................AGTCGCAAAGTGCTCTGATGGGCT.................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0
..................................................................................................................................................TATAGAATATTTTGAACTGCAAA.................................................................................. 23 0 1 1.00 1 1 0 0 0
.....................................................................................GCAAAGTGCTCTGATGGGCTGGG............................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
..........................................................................................GTGCTCTGATGGGCTGGGCT............................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
..................................................................................................................GTTTGCTCGGCCTTTATCAATGGCT................................................................................................................ 25 0 1 1.00 1 0 1 0 0
.................ATGGTTGTGGAGGCATGTGTCT.................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
.........................................................................................AGTGCTCTGATGGGCTGGGCT............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.......................GTGGAGGCATGTGTCTGCACCT.............................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0
.......................................................................................AAAGTGCTCTGATGGGCTGGG............................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
....................GTTGTGGAGGCATGTGTCTGCAC................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0
....................................................................AATGGCTGCTCGAAGTCGCAAAGT............................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
....................................................................................CGCAAAGTGCTCTGATGGGCTGG................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0
............................................................TACCCTGTAATGGCTGCTCGAAGTCGC.................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0
...................................................................................................................................................ATAGAATATTTTGAACTGCAA................................................................................... 21 0 1 1.00 1 0 1 0 0
.....................................................................................CCAAAGTGCTCTGATGGGCTGGGC.............................................................................................................................................. 24 1 1 1.00 1 1 0 0 0
........................................................................................AAGTGCTCTGATGGGCTGTG............................................................................................................................................... 20 1 1 1.00 1 1 0 0 0
...................................................................................TCGCAGTGTGCTTTGATGGGCT.................................................................................................................................................. 22 3 2 0.50 1 0 0 1 0
...................................................................................TCGCAGCGTGCTTTGATGGG.................................................................................................................................................... 20 3 4 0.25 1 0 0 1 0

Anti-sense strand reads

TCTGGGTGGGTTGACCATACCAACACCTCCGTACACAGACGTGGAGGGCGCACCCGAACTATGGGACATTACCGACGAGCTTCAGCGTTTCACGAGACTACCCGACCCGAGAAACAAACGAGCCGGAAATAGTTACCGATATATTTATATCTTATAAAACTTGACGTTTATGTGTGCTAAAAACGGGGAATACATTACACTGTAAAGGCGAAAAGCGAAAACTAAAACTGTTGAAAAACGCGTTAAAATAC
***************************************************************...........((((.(((.((..(((((((..((((.........)))).........................))))))).....)).))).)))).***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
..............................GTACACATAAGTGGAGGGCTCA....................................................................................................................................................................................................... 22 3 1 2.00 2 2
..............................GTACACATAAGTGGAGGGCTC........................................................................................................................................................................................................ 21 3 1 1.00 1 1
.................................................................................................................................TAGTTACCGCAATATTTAT....................................................................................................... 19 2 5 0.20 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2R:7456571-7456821 + dya_485 AGACCCACCCAACTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGCGTGGGCTTGATACCCTGTAATGGCTGCTCG---AAGTC------GCA------A------AGTG---CTCTGATGGGCTGGGCTCTTTGTTTGCTCGGC---CT-TTATCAATGGCTATATAAATA---TAGAATATTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------T------TTTTGCCC--CT--TATGT--AATGTGACA--TTTCCGCTTTTCGC-TTTTGATTTTGACAACTTTTT------GCGCAATTTTA--TG--
droEre2 scaffold_4845:16322489-16322733 + der_1167 AGACCCACCCAACTGGCATGGTTGTGGAGGCATGTGTGTGCACCTCCCGAGTGGGCTTGATACCCTGTAATGGCTGCTCG---AAATC------GCA------G------AGTG---CGCTGATGGGCTGGGCTCTTTGTGTGCTCGGC---CT-TTATCAATGGCTATATAAATA---TCGAATAGTTTGAACTACAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------T------TCT--GCC--TT--TATGT--AATGTGACA--TTTCCGGG-----C-TTTTGATTTTGACAAGTTTTT------GCACAATTT-ATGTG--
droSec2 scaffold_1:7009810-7010033 - AGACCCATCCAACTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGTGTGGGCTTGATACCCTGTAATGGCTGCTCG---AAGTC------GCA------G------AGCG---CCGTGCTGGGCTCGGCTCTTTGTTTGCTCGGC---CT-TTATCAATGGCTAAATAAATA---TCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------TCACACG------------------------------------------------------------------------------A--TTTCCGCT-----C-TTTTGATTTTGACAAGTTTTT------GAGCAATTT-ATGTGTG
droSim2 2r:10155236-10155482 - AGACCCATCCAACTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGCGTGGGCTTGATACCCTGTAATGGCTGCTCG---AAGTC------GCA------G------AGCG---CCGTGCTGGGCTCGGCTCTTTGTTTGCTCGGC---CT-TTATCAATGGCTAAATAAATA---TCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------T------TTC--GCC--TT--TATGT--AATGTGACA--TTTCCGCT-----C-TTTTGATTTTGACAAGTTTTT------GCGCAATTT-ATGTGTG
dm3 chr2R:9491998-9492244 - AGACCCACCCAAGTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGGGTGGGCTTGATACCCTGTAATGGCTGCTCG---AAGTC------GCA------G------TGTG---CTGTGCTGGGCTGGGCACTTTGTTTGTACGGC---CT-TTATCAATGGCTAAATAAATA---TCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------T------TTT--GCC--TT--TATGT--AATGTGACA--TTTCCGCT-----C-TTTTGATTTTGACAAGTTTTT------GCGCAATTT-ATGTGTG
droEug1 scf7180000409462:3367851-3368099 + AGACCCATCCGACTGGCATGGTTGTGGAGGCATGTGTCTGCACCTCACGAGTTGGCCTGATACCCTGTAATGGCTGTACG---AAATT--TGC-ACAA---------CGAAATA---GTTTAATGGGCTTGGCACTTTGTTTGCTTGGTTTGCT-TTATCAATGGCTAAATAAATA---TCGAATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------------------GCCT-TT--AATGT--AATGTGACA--TTTCCGGA-----C-TTTTGATTTTGACAAGTTTTTTGTTTGAAGAAATTT-ATG----
droBia1 scf7180000302291:666967-667209 + AGTTACATCCCACCGGTATGGTTGTGGAGGCCTGTGTCTGCACCTCCCGAGTGGGTCTGATACCCTGTAATGGCTGCTCG---AAAAC------TCGG---------CTCGGTG---GAGCTACGGGCTGGGCTCTTTGTTTGCTCGGC---CT-TTATCAATGGCTAAATAAATA---TCGAATCGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACG----------------------------------------------T------TTT--GCC--TT--TATGT--AATGTGACA--TTTCCGCT-----C-TTTTGATTTTAACAGGTCTCT------GCAAAATTT-ATGTG--
droTak1 scf7180000415401:1157585-1157830 + AGACCCATCCGACGGGAATGGTTGTGGAGGCCTGTGTCTGCACCTCCCGCGTGGGTCTGATACCCTGTAATGGCGGCTCG---AACAC------TCGG---------CTCGGTGGCGTTGTAATGGGCTTGGCTCTTTGTTTGCCCGGC---CT-TTATCGATGGCTAAATAAATA---TCGAATGGTCTGAACTGCAAAT--------------------------------------------------------------------------------------------ACG----------------------------------------------T------TTC--GCC--TT--TATGT--AATGTGACA--TTTCCGGG-----C-TTTTGATTTTGACAAGTTTCT------GTGAAATTT-ATGTG--
droEle1 scf7180000491282:744577-744819 - AGACCCATGCCACGGGAATGGTGGTGGAGGCCTGTGTCTGCACCTCCAAAGTGGGCCTGATACCCTGTAATGGCTGCTCC---AACTC------ACGG---------CTCAGTG---GAGCAACGGGCTTGGCACTTTGTTTGATCGGC---CT-TTATCAATGGCTAAATAAATA---TCGAATACTTTGAACGGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------T------TTT--CCC--CT--TTTGT--AATGTGACA--TTTCCGGG-----C-TTTTGATTTTGACAAGTTTTTT-----GCGAAATTT-ATGTG--
droRho1 scf7180000780243:9836-10078 + AGACCCATGCCACGGGAATGGTGGTGGAGGCCTGTGTCTGCACCTCCCAAGTGGGCCTGATACCCTGTAATGGCGGCTCG---AACTC------CCAA---------ATCAGTG---GTGCAACGGGCTTGGCTCTTTGTTTGCTCGGA---CT-TTATCAATGGCTAAATAAATA---GCGAATACTTTGAACGGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------T------TTT--CCC--TT--TGTGTA-AATGTGACA--TTTCCGGG-----C-TTTTGATTTTGACAAGTTTTT------GCACAATTT-ATGTG--
droFic1 scf7180000454039:307366-307608 - AGACCCATTCCACGGGAATGGTTGTGGAGGCCTGTGTCTGCACCTCCCGCGTGGGTTTGATACCCTGTAATGGCTGCTCA---AATAT------CCAA---------CTCAATG---GTGTAATGGGCTGGGCTCTTTGTTTGCTCGGC---CT-TTATCGATGGCTAAATAAATA---TCGAATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------T------GTT--GCC--TT--TATGT--AATGTGACA--TTTCCGCG-----C-TTTTGATTTTGACAAGTTTTTC-----GCGAAATTT-ATGTG--
droKik1 scf7180000302638:164306-164547 + AGACCCACGAGAACGGAATGCAGGTGGAGGCCTGCGTGTGCACCTCTCGCCTGGGAATGATACCCTGTAATGGCTGCTCA---AGGCAGCGGCT---G---------CACGATC---GTGTAATGGGCTTGGCCCTGTGCCTGCTTGGT---GC-TTATCAGTTGCTAAATAAATTTCGTCGGATAGTTTGATCAGCAAAC--------------------------------------------------------------------------------------------ATATA--------------------------------------------------------------------GTAATATGTGACA--TTTCCTGC-----T-CTTTGGTTTTGACAAGTTG-G------GCGAAATGA-ATGTGTG
droAna3 scaffold_13266:16795028-16795267 - AGACTAAGGAGAATGGCATGCAGGTGGAGGCCTGTGTCTGCACCTCTAGAGTCGGACTGCAACCCTGTAATGGATCTGCA---AACAA------CAAA---------CCAACAC---TGGTAATGGGCTGGGCGCTGTGTTTGATCGGC---TC-TTATCAATTGCTTAATAAATA---TCGAATACTTTGAAC----AAT--------------------------------------------------------------------------------------------GC-----------------------------------------------T------TTT--GAC--TGGCAATGT--AATGTGACA--TTTCCGGG-----C-TTTTGATTTTGACAAGTTTTT------GTGAAATTT-ATGTG--
droBip1 scf7180000396735:48431-48672 - AGACTTATGAGAATGGCATGCAGGTGGAGGCCTGCGTCTGCACATCTAGAGTCGGCCTGATGCCCTGTAATGGCTCGGCA---AACAA------TGGA---------CCAACAC---TTGTAATGGGCTGGGCACTGTGTTTGCTCGGC---TC-TTATCAATTGCTTAATAAATA---TCGAATAGTTTGAACTGACAGT--------------------------------------------------------------------------------------------GC-----------------------------------------------T------TTT--GAC--TGGCAATGT--AATGTGACA--TTTCCTGG-----C-TTTTGATTTTGACAAGTTTTT------GCGAAATTT-ATG----
dp5 3:14589588-14589854 + AGACCCATCCCACTGGCATGCAGGTCGAGGCCTGTGTGTGCACCTCCCGAGTAGGTCTGATACCCTGTAATGGCTGCTCTCCCGGCAC------TCAATCGATG---------C---ATGTAATGGGCCTGGCCCTCTGTTTGCTCAAC---GT-TTATCAATTGCTGAATAAATA---TCGAATAGTTTGACACGGGGAG--------------------------------------------------------------------------------------------AGACACCCCCCTCCCCCCCCCCCCCACCCCT-----------------------------------CG--TGTGT--AATGTGACA--TTTCCGGA-----CTTTTTGATTTTGACAAGTTTC-------ATGAAATTT-ATGGG--
droPer2 scaffold_4:3016784-3017042 - AGACCCATCCCACTGGCATGCAGGTCGAGGCCTGTGTGTGCACCTCCCGAGTCGGTCTGATACCCTGTAATGGCTGCTCTCCCGGCAC------TCAATCGATG---------C---ATGTAATGGGCCTGGCCCTCTGTTTGCTCAAC---GT-TTATCAATTGCTGAATAAATA---TCGAATAGTTTGACACGCTC-T--ACTCTGGTCTCT--------------------------------------------------------------------------------------CCCCCCCCCCCCCCCCCCCCCCT-----------------------------------CG--TGTGT--AATGTGACA--TTTCCGGG-----CCTTTTGATTTTGACAAGTTTC-----------------A--TG--
droWil2 scf2_1100000004822:1310570-1310808 + AGACCTATTCGACGGGCATGCAAGTGGAGGCTTGTGTTTGCACTTCAAAAATTGGTCTAATACCCTGTAATGGGTGTTCA---GA-TCGCAG--TCAAGTGAATCAGCTTATTG---GTTTTCTGGGTTTGGCATT--GTTTGTTT--------------TCTGGTTAAATAAATA---GTTA-TGGTT---------AT----------------------------------------------------------------------------------------------------------------------------------------------TGTTTAATTT--CCCTCTA--TTTGA--AACGTGACAAGTTTCCGCGCCAAGTTGTTTGATTTTGACAAGTC-----------GCAATGT-AAA-A--
droVir3 scaffold_12875:8070649-8070801 - AAACGCATTCGACGGGCATGCAGGTGGAAGCCTGCGTTTGCACCTCCAAACTGGGCCTGATGCCCTGCAATGGCAGCTTG---AGTAC------GCAG---------TCTCAAC---AAGTTTTGGGCTTTGCCATAGCCTTGCTCAGC---GTTTTTATGATTGTTAAATAAACA---T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:19189140-19189218 + AAACCCAGGCGACGGGCATGCAGGTGGAGGCTTGTGTTTGCACCTCTAAACTGGGTCTGATACCCTGCAATTGCAGCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:1559764-1560127 - AAAAGCATTCGACGGGCATGCAGGTTGAGGCCTGTGTTTGCACCTCCAAGCTGGGTCTGATACCCTGTAATAATAGCCCA---ACAAC--GAAT---G---------CTCAACA----ATCTCTGGGCTTGGCCATAGCACTGCTCAGC---GTGTTAATAATTGTTAAATAAACA---AAAAAATATATAAAT----AATGTACTC-GATATCTGTCGCACTTCCACACGTTGGCAAGTGCATTGCCCATTTGTTTAGTCAACGTCAATATAGGGGGGTTTGAGTGGGGGAGAGACTCGGCCTTTATATTGTATGTGGTACTTGGTGTGCGACTTCGCTCTT------TTT--CAA--TAACCATCT--AATTTGACA--TTTCCGCG-----C-TTTTGATTTTGACAAGTTTG------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
AGACCCACCCAACTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGCGTGGGCTTGATACCCTGTAATGGCTGCTCG---AAGTC------GCA------A------AGTG---CTCTGATGGGCTGGGCTCTTTGTTTGCTCGGC---CT-TTATCAATGGCTATATAAATA---TAGAATATTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------T------TTTTGCCC--CT--TATGT--AATGTGACA--TTTCCGCTTTTCGC-TTTTGATTTTGACAACTTTTT------GCGCAATTTTA--TG--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................GTTGTGGAGGCATGTGTCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................2112.00201000010000
..............................................................................................................AGTG---CTCTGATGGGCTGGG....................................................................................................................................................................................................................................................................................................................1912.00202000000000
............................GGCATGTGTCTGCACCTCCCGCGT....................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000000000
.......................................................................................................................................................................................................AT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------T------TTTTGCCC--C................................................................................2011.00101000000000
.......................................................................................C------GCA------A------AGTG---CTCTGATGGGCTGGG....................................................................................................................................................................................................................................................................................................................2411.00101000000000
...............................................................................................CA------A------AGTG---CTCTGATGGGCTGGG....................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........................................................ATACCCTGTAATGGCTGCTCG---AAGT.................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
............CTGGTATGGTTGTGGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.......................................................CTTGATACCCTGTAATGGCTGCTCG---AA...................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.........CAACTGGTATGGTTGTGGAGGCAT.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.....................................................................................................................CTCTGATGGGCTGGGCTCTTT..............................................................................................................................................................................................................................................................................................................2111.00100000010000
................................TGTGTCTGCACCTCCCGCGT....................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................GAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------T------TTT........................................................................................2311.00101000000000
..............................................................................................GCA------A------AGTG---CTCTGATGGGCTGGGC...................................................................................................................................................................................................................................................................................................................2411.00100000010000
...........................................................................................................................TGGGCTGGGCTCTTTGTTTGCTCGG....................................................................................................................................................................................................................................................................................................2511.00110000000000
...........................AGGCATGTGTCTGCACCTCCC........................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.....................................................................................................................................................................................................AAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------T------TTTTGCCC--CT--TA...........................................................................2511.00101000000000
...................................GTCTGCACCTCCCGCGTGGGCTTG.............................................................................................................................................................................................................................................................................................................................................................................................2411.00100000100000
............CTGGTATGGTTGTGGAGGCATGTG....................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...............GTATGGTTGTGGAGGCATGTGTC..................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...........................................................................GCTCG---AAGTC------GCA------A------AGTG---CTCTGATGGG.........................................................................................................................................................................................................................................................................................................................2811.00100000010000
.......................................................................................................................................................................................................AT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------T------TTTTGCCC--.................................................................................1911.00101000000000
.........................................................................................................................GATGGGCTGGGCTCTTTGTTTG.........................................................................................................................................................................................................................................................................................................2211.00101000000000
............CTGGTATGGTTGTGGAGGCATGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..........................................................................TGCTCG---AAGTC------GCA------A------AGTG---CTCTGATGG..........................................................................................................................................................................................................................................................................................................................2811.00100000010000
...........................................................................GCTCG---AAGTC------GCA------A------AGTG---CTCTGATG...........................................................................................................................................................................................................................................................................................................................2611.00100000010000
..............................................................................CG---AAGTC------GCA------A------AGTG---CTCTGATGG..........................................................................................................................................................................................................................................................................................................................2411.00100000010000
...................................GTCTGCACCTCCCGCGTGG..................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..............................................................................CG---AAGTC------GCA------A------AGTG---CTCTGATGGG.........................................................................................................................................................................................................................................................................................................................2511.00101000000000
.............................................CCCGCGTGGGCTTGATACCCTGT....................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
....................................................................................AGTC------GCA------A------AGTG---CTCTGATGGGCT.......................................................................................................................................................................................................................................................................................................................2411.00101000000000
..............................................................................................................................................................................TA---TAGAATATTTTGAACTGCAAA................................................................................................................................................................................................................................................2311.00100000010000
..............................................................................................GCA------A------AGTG---CTCTGATGGGCTGGG....................................................................................................................................................................................................................................................................................................................2311.00100000010000
...............................................................................................................GTG---CTCTGATGGGCTGGGCT..................................................................................................................................................................................................................................................................................................................2011.00100000010000
..........................................................................................................................................GTTTGCTCGGC---CT-TTATCAATGGCT.................................................................................................................................................................................................................................................................................2511.00101000000000
.................ATGGTTGTGGAGGCATGTGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..............................................................................................................AGTG---CTCTGATGGGCTGGGCT..................................................................................................................................................................................................................................................................................................................2111.00100000010000
.......................GTGGAGGCATGTGTCTGCACCT...........................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
................................................................................................A------A------AGTG---CTCTGATGGGCTGGG....................................................................................................................................................................................................................................................................................................................2111.00100000010000
....................GTTGTGGAGGCATGTGTCTGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
....................................................................AATGGCTGCTCG---AAGTC------GCA------A------AGT.......................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.......................................................................................C------GCA------A------AGTG---CTCTGATGGGCTGG.....................................................................................................................................................................................................................................................................................................................2311.00100000010000
............................................................TACCCTGTAATGGCTGCTCG---AAGTC------GC........................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
...............................................................................................................................................................................A---TAGAATATTTTGAACTGCAA.................................................................................................................................................................................................................................................2111.00101000000000
droEre2
AGACCCACCCAACTGGCATGGTTGTGGAGGCATGTGTGTGCACCTCCCGAGTGGGCTTGATACCCTGTAATGGCTGCTCG---AAATC------GCA------G------AGTG---CGCTGATGGGCTGGGCTCTTTGTGTGCTCGGC---CT-TTATCAATGGCTATATAAATA---TCGAATAGTTTGAACTACAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------T------TCT--GCC--TT--TATGT--AATGTGACA--TTTCCGGG-----C-TTTTGATTTTGACAAGTTTTT------GCACAATTT-ATGTG--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................ATAGTTTGAACTACAAAT--------------------------------------------------------------------------------------------ACACAC.............................................................................................................................................2412.0022000000
............................................................................................................................................................................................TTGAACTACAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------T------TCT--GC....................................................................................2711.0011000000
...............................................................................G---AAATC------GCA------G------AGTG---CGCTGATGGGCTG......................................................................................................................................................................................................................................................................................................................2711.0010000100
...............................................................................G---AAATC------GCA------G------AGTG---CGCT...............................................................................................................................................................................................................................................................................................................................1811.0011000000
......................................................................................TC------GCA------G------AGTG---CGCTGATGGGC........................................................................................................................................................................................................................................................................................................................2111.0011000000
........................................................................................................................................................................................................................................................................................................CACG--------------------------------A---------T------TCT--GCC--TT--TATGT--......................................................................1911.0011000000
.........................................................................................................................................................................................................................................................................................................ACG--------------------------------A---------T------TCT--GCC--TT--TATGT--......................................................................1811.0010000010
...............................................................................................................................................................................A---TCGAATAGTTTGAACTAC...................................................................................................................................................................................................................................................1911.0011000000
..............................................................................CG---AAATC------GCA------G------AGTG---CGCTGATGGGCT.......................................................................................................................................................................................................................................................................................................................2711.0010000010
............................................................................CTCG---AAATC------GCA------G------AGTG---CGCTGATGGG.........................................................................................................................................................................................................................................................................................................................2711.0010000100
...............................................................................................................GTG---CGCTGATGGGCTGGGCT..................................................................................................................................................................................................................................................................................................................2011.0010000010
..............................................................................CG---AAATC------GCA------G------AGTG---CGCTGATGG..........................................................................................................................................................................................................................................................................................................................2411.0011000000
............CTGGCATGGTTGTGGAGGCATGT.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
.......................................................CTTGATACCCTGTAATGGCTGCT..........................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
....................................................................AATGGCTGCTCG---AAATC------GC........................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.......................................................................................C------GCA------G------AGTG---CGCTGATGGGCTGGGCT..................................................................................................................................................................................................................................................................................................................2611.0011000000
..................................................................................................................................GGCTCTTTGTGTGCTCGGC---................................................................................................................................................................................................................................................................................................1911.0011000000
.................ATGGTTGTGGAGGCATGTGTGTG................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
droSec2
AGACCCATCCAACTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGTGTGGGCTTGATACCCTGTAATGGCTGCTCG---AAGTC------GCA------G------AGCG---CCGTGCTGGGCTCGGCTCTTTGTTTGCTCGGC---CT-TTATCAATGGCTAAATAAATA---TCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------TCACACG------------------------------------------------------------------------------A--TTTCCGCT-----C-TTTTGATTTTGACAAGTTTTT------GAGCAATTT-ATGTGTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................ATAAATA---TCGCATAGTTTGAAC......................................................................................................................................................................................................................................................2211.0011000
.................ATGGTTGTGGAGGCATGTGTC..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
droSim2
AGACCCATCCAACTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGCGTGGGCTTGATACCCTGTAATGGCTGCTCG---AAGTC------GCA------G------AGCG---CCGTGCTGGGCTCGGCTCTTTGTTTGCTCGGC---CT-TTATCAATGGCTAAATAAATA---TCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------T------TTC--GCC--TT--TATGT--AATGTGACA--TTTCCGCT-----C-TTTTGATTTTGACAAGTTTTT------GCGCAATTT-ATGTGTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................AAATA---TCGCATAGTTTGAACTG....................................................................................................................................................................................................................................................2211.00101000000000000000
......ATCCAACTGGTATGGTTGTGGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
..............................................................................................GCA------G------AGCG---CCGTGCTGGGCTCGGCTCTTT..............................................................................................................................................................................................................................................................................................................2911.00100010000000000000
...............................................................................................................................................................................A---TCGCATAGTTTGAACTG....................................................................................................................................................................................................................................................1811.00101000000000000000
....................................................................................................................................................................GCTAAATAAATA---TCGCATAGTT...........................................................................................................................................................................................................................................................2211.00100010000000000000
...............................................................................................................................................................................A---TCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACAC.............................................................................................................................................2911.00100010000000000000
..................................................................GTAATGGCTGCTCG---AAGTC------GCA------G------..........................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
..................................................................................................................................GGCTCTTTGTTTGCTCGGC---................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.............................................................................................................................................................................ATA---TCGCATAGTTTGAACTGCAA.................................................................................................................................................................................................................................................2311.00100010000000000000
...........................................................................................................................................................................AAATA---TCGCATAGTTTGAACTGC...................................................................................................................................................................................................................................................2311.00101000000000000000
........................................................................................................................................................................................TAGTTTGAACTGCAAAA--------------------------------------------------------------------------------------------G..................................................................................................................................................18200.05100000000100000000
dm3
AGACCCACCCAAGTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGGGTGGGCTTGATACCCTGTAATGGCTGCTCG---AAGTC------GCA------G------TGTG---CTGTGCTGGGCTGGGCACTTTGTTTGTACGGC---CT-TTATCAATGGCTAAATAAATA---TCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------T------TTT--GCC--TT--TATGT--AATGTGACA--TTTCCGCT-----C-TTTTGATTTTGACAAGTTTTT------GCGCAATTT-ATGTGTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........CAAGTGGTATGGTTGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000
.................................GTGTCTGCACCTCCCGGGTGGGCT...............................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000
........CCAAGTGGTATGGTTGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
............................GGCATGTGTCTGCACCTCCCGGGT....................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TGTGACA--TTTCCGCT-----C-TTTTGATTT...................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................A------G------TGTG---CTGTGCTGGGCT.......................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................TTGTACGGC---CT-TTATCAAT.....................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TGCTCG---AAGTC------GCA------G------TGTG---...................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................A------G------TGTG---CTGTGCTGGGCTGGGC...................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................ATGGCTGCTCG---AAGTC------GC........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................G------TGTG---CTGTGCTGGGCT.......................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TGGTTGTGGAGGCATGTGTC..................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TGTG---CTGTGCTGGGCTGGGC...................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................TTGTGGAGGCATGTGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............GTATGGTTGTGGAGGCATGTGTCTGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................GCATGTGTCTGCACCTCCCGGGTGG..................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................GTG---CTGTGCTGGGCTGGGCA..................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................TTTGTACGGC---CT-TTATCAAT.....................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CATGTGTCTGCACCTCCCGGGTGGGCT...............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................TC------GCA------G------TGTG---CTGTGCTGGTA........................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................ATGGTTGTGGAGGCATC......................................................................................................................................................................................................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TGGGCTGGGCACTTC..............................................................................................................................................................................................................................................................................................................15150.4060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
AGACCCATCCGACTGGCATGGTTGTGGAGGCATGTGTCTGCACCTCACGAGTTGGCCTGATACCCTGTAATGGCTGTACG---AAATT--TGC-ACAA---------CGAAATA---GTTTAATGGGCTTGGCACTTTGTTTGCTTGGTTTGCT-TTATCAATGGCTAAATAAATA---TCGAATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------------------GCCT-TT--AATGT--AATGTGACA--TTTCCGGA-----C-TTTTGATTTTGACAAGTTTTTTGTTTGAAGAAATTT-ATG----SizeHit CountTotal NormTotal
No Reads
droBia1
AGTTACATCCCACCGGTATGGTTGTGGAGGCCTGTGTCTGCACCTCCCGAGTGGGTCTGATACCCTGTAATGGCTGCTCG---AAAAC------TCGG---------CTCGGTG---GAGCTACGGGCTGGGCTCTTTGTTTGCTCGGC---CT-TTATCAATGGCTAAATAAATA---TCGAATCGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACG----------------------------------------------T------TTT--GCC--TT--TATGT--AATGTGACA--TTTCCGCT-----C-TTTTGATTTTAACAGGTCTCT------GCAAAATTT-ATGTG--SizeHit CountTotal NormTotal
No Reads
droTak1
AGACCCATCCGACGGGAATGGTTGTGGAGGCCTGTGTCTGCACCTCCCGCGTGGGTCTGATACCCTGTAATGGCGGCTCG---AACAC------TCGG---------CTCGGTGGCGTTGTAATGGGCTTGGCTCTTTGTTTGCCCGGC---CT-TTATCGATGGCTAAATAAATA---TCGAATGGTCTGAACTGCAAAT--------------------------------------------------------------------------------------------ACG----------------------------------------------T------TTC--GCC--TT--TATGT--AATGTGACA--TTTCCGGG-----C-TTTTGATTTTGACAAGTTTCT------GTGAAATTT-ATGTG--SizeHit CountTotal NormTotal
No Reads
droEle1
AGACCCATGCCACGGGAATGGTGGTGGAGGCCTGTGTCTGCACCTCCAAAGTGGGCCTGATACCCTGTAATGGCTGCTCC---AACTC------ACGG---------CTCAGTG---GAGCAACGGGCTTGGCACTTTGTTTGATCGGC---CT-TTATCAATGGCTAAATAAATA---TCGAATACTTTGAACGGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------T------TTT--CCC--CT--TTTGT--AATGTGACA--TTTCCGGG-----C-TTTTGATTTTGACAAGTTTTTT-----GCGAAATTT-ATGTG--SizeHit CountTotal NormTotal
No Reads
droRho1
AGACCCATGCCACGGGAATGGTGGTGGAGGCCTGTGTCTGCACCTCCCAAGTGGGCCTGATACCCTGTAATGGCGGCTCG---AACTC------CCAA---------ATCAGTG---GTGCAACGGGCTTGGCTCTTTGTTTGCTCGGA---CT-TTATCAATGGCTAAATAAATA---GCGAATACTTTGAACGGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------T------TTT--CCC--TT--TGTGTA-AATGTGACA--TTTCCGGG-----C-TTTTGATTTTGACAAGTTTTT------GCACAATTT-ATGTG--SizeHit CountTotal NormTotal
No Reads
droFic1
AGACCCATTCCACGGGAATGGTTGTGGAGGCCTGTGTCTGCACCTCCCGCGTGGGTTTGATACCCTGTAATGGCTGCTCA---AATAT------CCAA---------CTCAATG---GTGTAATGGGCTGGGCTCTTTGTTTGCTCGGC---CT-TTATCGATGGCTAAATAAATA---TCGAATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------T------GTT--GCC--TT--TATGT--AATGTGACA--TTTCCGCG-----C-TTTTGATTTTGACAAGTTTTTC-----GCGAAATTT-ATGTG--SizeHit CountTotal NormTotal
No Reads
droKik1
AGACCCACGAGAACGGAATGCAGGTGGAGGCCTGCGTGTGCACCTCTCGCCTGGGAATGATACCCTGTAATGGCTGCTCA---AGGCAGCGGCT---G---------CACGATC---GTGTAATGGGCTTGGCCCTGTGCCTGCTTGGT---GC-TTATCAGTTGCTAAATAAATTTCGTCGGATAGTTTGATCAGCAAAC--------------------------------------------------------------------------------------------ATATA--------------------------------------------------------------------GTAATATGTGACA--TTTCCTGC-----T-CTTTGGTTTTGACAAGTTG-G------GCGAAATGA-ATGTGTGSizeHit CountTotal NormTotal
No Reads
droAna3
AGACTAAGGAGAATGGCATGCAGGTGGAGGCCTGTGTCTGCACCTCTAGAGTCGGACTGCAACCCTGTAATGGATCTGCA---AACAA------CAAA---------CCAACAC---TGGTAATGGGCTGGGCGCTGTGTTTGATCGGC---TC-TTATCAATTGCTTAATAAATA---TCGAATACTTTGAAC----AAT--------------------------------------------------------------------------------------------GC-----------------------------------------------T------TTT--GAC--TGGCAATGT--AATGTGACA--TTTCCGGG-----C-TTTTGATTTTGACAAGTTTTT------GTGAAATTT-ATGTG--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........GAATGGCATGCAGGTGGA............................................................................................................................................................................................................................................................................................................................................................................................................................1812.002100010
.........................................ACCTCTAGAGTCGGACTGCAACC........................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............................................................................A---AACAA------CAAA---------CCAACAC---TGGTA..............................................................................................................................................................................................................................................................................................................................2211.001100000
..........GAATGGCATGCAGGTGGAGGCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.............................................CTAGAGTCGGACTGCAACCCTGTAACC................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
......AGGAGAATGGCATGCAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
.................................GTGTCTGCACCTCTAGAGT....................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.GACTAAGGAGAATGGCATGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........AGAATGGCATGCAGGTGGAGGCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
............................GGCCTGTGTCTGCACCTCTAGAGTCGGAC...............................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
....TAAGGAGAATGGCATGCAGGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...........................AGGCCTGTGTCTGCACCT...........................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.........................................................TGCAACCCTGTAATGGATCTGCA---AACAA------C.........................................................................................................................................................................................................................................................................................................................................................2911.001010000
droBip1
AGACTTATGAGAATGGCATGCAGGTGGAGGCCTGCGTCTGCACATCTAGAGTCGGCCTGATGCCCTGTAATGGCTCGGCA---AACAA------TGGA---------CCAACAC---TTGTAATGGGCTGGGCACTGTGTTTGCTCGGC---TC-TTATCAATTGCTTAATAAATA---TCGAATAGTTTGAACTGACAGT--------------------------------------------------------------------------------------------GC-----------------------------------------------T------TTT--GAC--TGGCAATGT--AATGTGACA--TTTCCTGG-----C-TTTTGATTTTGACAAGTTTTT------GCGAAATTT-ATG----SizeHit CountTotal NormTotal
No Reads
dp5
AGACCCATCCCACTGGCATGCAGGTCGAGGCCTGTGTGTGCACCTCCCGAGTAGGTCTGATACCCTGTAATGGCTGCTCTCCCGGCAC------TCAATCGATG---------C---ATGTAATGGGCCTGGCCCTCTGTTTGCTCAAC---GT-TTATCAATTGCTGAATAAATA---TCGAATAGTTTGACACGGGGAG--------------------------------------------------------------------------------------------AGACACCCCCCTCCCCCCCCCCCCCACCCCT-----------------------------------CG--TGTGT--AATGTGACA--TTTCCGGA-----CTTTTTGATTTTGACAAGTTTC-------ATGAAATTT-ATGGG--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.GACCCATCCCACTGGCATGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030300000000
.GACCCATCCCACTGGCATGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020110000000
...............................................................................................................................................................................A---TCGAATAGTTTGACACGGGGAG--------------------------------------------------------------------------------------------...................................................................................................................................................2312.0020200000000
...........................................................................................................................................................................AAATA---TCGAATAGTTTGACACGGGGA................................................................................................................................................................................................................................................2611.0010100000000
.......................................................................................................................................................................................................................................................................................................ACACCCCCCTCCCCCCCCC..............................................................................................................................1911.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................GT--AATGTGACA--TTTCCGGA-----..............................................1911.0010100000000
...CCCATCCCACTGGCATGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................TACCCTGTAATGGCTGCTCTCCCGGCA.................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
............................................................................................................................................................TATCAATTGCTGAATAAATA---TCGA.................................................................................................................................................................................................................................................................2411.0010100000000
......................GGTCGAGGCCTGTGTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................CAATCGATG---------C---ATGTAATGGGCCT......................................................................................................................................................................................................................................................................................................................2311.0010100000000
.........................................................................................................................................................................ATAAATA---TCGAATAGTTTGACACGGG..................................................................................................................................................................................................................................................2611.0010100000000
...................................................................................GGCAC------TCAATCGATG---------C---ATGTAATGGGC........................................................................................................................................................................................................................................................................................................................2711.0010100000000
.........................................................TGATACCCTGTAATGGCTGCTCTCCCG....................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
...........................................................................................................................................................TTATCAATTGCTGAATAAATA---TCGAATA..............................................................................................................................................................................................................................................................2811.0010100000000
.............................................................................................................................GGCCTGGCCCTCTGTTTGCTC......................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................CGAATAGTTTGACACGGGG.................................................................................................................................................................................................................................................1911.0010100000000
...............................................................................................................................................................................A---TCGAATAGTTTGACACGG...................................................................................................................................................................................................................................................1911.0010100000000
......................GGTCGAGGCCTGTGTGTGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................CTGATACCCTGTAATGGCTG............................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................GGCCTGGCCCTCTGTTTGC........................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................CGAATAGTTTGACACGGG..................................................................................................................................................................................................................................................1811.0010100000000
droPer2
AGACCCATCCCACTGGCATGCAGGTCGAGGCCTGTGTGTGCACCTCCCGAGTCGGTCTGATACCCTGTAATGGCTGCTCTCCCGGCAC------TCAATCGATG---------C---ATGTAATGGGCCTGGCCCTCTGTTTGCTCAAC---GT-TTATCAATTGCTGAATAAATA---TCGAATAGTTTGACACGCTC-T--ACTCTGGTCTCT--------------------------------------------------------------------------------------CCCCCCCCCCCCCCCCCCCCCCT-----------------------------------CG--TGTGT--AATGTGACA--TTTCCGGG-----CCTTTTGATTTTGACAAGTTTC-----------------A--TG--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................C------TCAATCGATG---------C---ATGTAATGGGC........................................................................................................................................................................................................................................................................................................................2311.001010000
.....................................GTGCACCTCCCGAGTCGGT................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
......................GGTCGAGGCCTGTGTGTGCACC............................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
................................................................................................................................................................AATTGCTGAATAAATA---TCGA.................................................................................................................................................................................................................................................................2011.001010000
.................................GTGTGTGCACCTCCCGAGTCGGT................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droWil2
AGACCTATTCGACGGGCATGCAAGTGGAGGCTTGTGTTTGCACTTCAAAAATTGGTCTAATACCCTGTAATGGGTGTTCA---GA-TCGCAG--TCAAGTGAATCAGCTTATTG---GTTTTCTGGGTTTGGCATT--GTTTGTTT--------------TCTGGTTAAATAAATA---GTTA-TGGTT---------AT----------------------------------------------------------------------------------------------------------------------------------------------TGTTTAATTT--CCCTCTA--TTTGA--AACGTGACAAGTTTCCGCGCCAAGTTGTTTGATTTTGACAAGTC-----------GCAATGT-AAA-A--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................GTTCA---GA-TCGCAG--TCAAGTGA..................................................................................................................................................................................................................................................................................................................................................2115.00520300
...........................................................................GTTCA---GA-TCGCAG--TCAAGT....................................................................................................................................................................................................................................................................................................................................................1913.00300300
...........................................................................GTTCA---GA-TCGCAG--TCAAGTG...................................................................................................................................................................................................................................................................................................................................................2012.00200200
......ATTCGACGGGCATGCAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200
.................................................AATTGGTCTAATACCCTGTAATGGGT.............................................................................................................................................................................................................................................................................................................................................................................2611.00101000
..........................................................................................................................CTGGGTTTGGCATT--GTTTGTTT--------------T.......................................................................................................................................................................................................................................................................................2311.00101000
.....................AAGTGGAGGCTTGTGTTTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.............................................................................................................TATTG---GTTTTCTGGGTTTGGCATT--GT............................................................................................................................................................................................................................................................................................................2611.00100100
...............................................AAAATTGGTCTAATACCCTGTAATGGGT.............................................................................................................................................................................................................................................................................................................................................................................2811.00101000
.......................GTGGAGGCTTGTGTTTGCACT............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
........................................................................................................................TTCTGGGTTTGGCATT--GTTTGTTT--------------TCT.....................................................................................................................................................................................................................................................................................2711.00100100
.........CGACGGGCATGCAAGTGGAGGCTTGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
......ATTCGACGGGCATGCAAGTGGAGGCT........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
......................................................................................................ATCAGCTTATTG---GTTTTCTGGGTTTGG....................................................................................................................................................................................................................................................................................................................2711.00101000
.GACCTATTCGACGGGCATGCAAGTGGA............................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
..............................................................CCCTGTAATGGGTGTTCA---GA-TC................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.GACCTATTCGACGGGCATGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.............................................................................TCA---GA-TCGCAG--TCAAGTGAAT................................................................................................................................................................................................................................................................................................................................................2111.00100100
.........CGACGGGCATGCAAGTGGAGGCT........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.................................................................TGTAATGGGTGTTCA---GA-TCGC..............................................................................................................................................................................................................................................................................................................................................................2111.00100100
.............................................................................TCA---GA-TCGCAG--TCAAGTGAA.................................................................................................................................................................................................................................................................................................................................................2011.00100100
.......TTCGACGGGCATGCAAGTGGAGGCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
.................................................................................................................................................................CTGGTTAAATAAATA---GTTA-TGGTT---------A.................................................................................................................................................................................................................................................2511.00100010
droVir3
AAACGCATTCGACGGGCATGCAGGTGGAAGCCTGCGTTTGCACCTCCAAACTGGGCCTGATGCCCTGCAATGGCAGCTTG---AGTAC------GCAG---------TCTCAAC---AAGTTTTGGGCTTTGCCATAGCCTTGCTCAGC---GTTTTTATGATTGTTAAATAAACA---T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................TTTGCACCTCCAAACTGGGC................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
.........CGACGGGCATGCAGGTGGAAGCCTG......................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.............................GCCTGCGTTTGCACCTCCAAACTGGG.................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TCTCAAC---AAGTTTTGGGCTTG.....................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.............GGGCATGCAGGTGGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
AAACCCAGGCGACGGGCATGCAGGTGGAGGCTTGTGTTTGCACCTCTAAACTGGGTCTGATACCCTGCAATTGCAGCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................GGTCTGATACCCTGCAATTGCAGCC..........................................................................................................................................................................................................................................................................................................................................................................2511.001100000
AAACCCAGGCGACGGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................................TGTTTGCACCTCTAAACTGGGTC...............................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droGri2
AAAAGCATTCGACGGGCATGCAGGTTGAGGCCTGTGTTTGCACCTCCAAGCTGGGTCTGATACCCTGTAATAATAGCCCA---ACAAC--GAAT---G---------CTCAACA----ATCTCTGGGCTTGGCCATAGCACTGCTCAGC---GTGTTAATAATTGTTAAATAAACA---AAAAAATATATAAAT----AATGTACTC-GATATCTGTCGCACTTCCACACGTTGGCAAGTGCATTGCCCATTTGTTTAGTCAACGTCAATATAGGGGGGTTTGAGTGGGGGAGAGACTCGGCCTTTATATTGTATGTGGTACTTGGTGTGCGACTTCGCTCTT------TTT--CAA--TAACCATCT--AATTTGACA--TTTCCGCG-----C-TTTTGATTTTGACAAGTTTG------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:39 PM