ID:

dya_459

 Coordinate:

2R:5503737-5503887 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.2 -32.8 -32.7 -32.4

Flybase annnotation

exon [dyak_GLEANR_12920:1]; CDS [Dyak\GE12688-cds]; intron [Dyak\GE12688-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCCGAGTTCTCCCGTAACCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTGAAGGCCGCTGAGTAATCTTTCCTTTGGGGAACATTTATTTTATTTTCAATGCGGTTGAAATTGAATAGCGAATTATGAATTCAGTTGCCGCAGCTTAAGTGAATATAAATTGAACTTAGTAAGTTCACAAAGACCAGAAGCGCTAGACACACTCTTATGTATTACATACATTTAAAAATCGAATTTTATGCAAC
**************************************************...((.......((((......(((...(((((..(((((((((((((((((....((((((...((((((((............))))))))))))))....))))))).))))))............)))).)))))...)))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M026
head
 GSM1528802
follicle cells		 V058
head
 M056
embryo
 V120
male body		 SRR1275488
Male larvae
..............................................................................................................................................................AATAGTAATTGAACTTAGTA......................................................................... 20 2 1 6.00 6 6 0 0 0 0 0 0
................................................ACGTAAGTCAAGGATGCTG........................................................................................................................................................................................ 19 3 9 2.67 24 22 0 0 0 0 2 0
...............................................................................................................................................................ATAGTAATTGAACTTAGTA......................................................................... 19 2 3 2.67 8 7 0 0 0 0 1 0
.............GTAACCAGATCAAGGACTACCAGA...................................................................................................................................................................................................................... 24 0 1 2.00 2 0 0 2 0 0 0 0
..............................................................................................................................................................AATAGTAATTGAACTTAGTACG....................................................................... 22 3 4 2.00 8 8 0 0 0 0 0 0
......................TCAAGGACTACCAGAAGACC................................................................................................................................................................................................................. 20 0 1 2.00 2 0 2 0 0 0 0 0
...............................................................................................................................................................ATAGTAATTGAACTTAGTACG....................................................................... 21 3 6 1.67 10 10 0 0 0 0 0 0
..............................................................................................................................................................AATAGTAATTGAACTTAGTAC........................................................................ 21 3 6 1.17 7 7 0 0 0 0 0 0
..........CCCGTAACCAGATCAAGGAC............................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0
........................AAGGACTACCAGAAGACCTTCA............................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0
.............................................................................................................................................................GAATAGTAATTGAACTTAGTACG....................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................GAATTATGAATTCAGTTGCCGC....................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0
...........CCGTAACCAGATCAAGGACTACC......................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................TAGTAATTGAACTTAGTACG....................................................................... 20 3 8 1.00 8 8 0 0 0 0 0 0
...............................................................................................................................................................ATAGTAATTGAACTTAGTAC........................................................................ 20 3 12 0.83 10 9 0 0 0 0 0 1
.............................................................................................................................................................CAATAGTAATTGAACTTAGTA......................................................................... 21 3 7 0.43 3 3 0 0 0 0 0 0
..............................................................................................................................................................AATAGTAATTGAACTTAGT.......................................................................... 19 2 12 0.42 5 5 0 0 0 0 0 0
................................................ACGTAAGTGAAGGATGCTGG....................................................................................................................................................................................... 20 3 5 0.40 2 2 0 0 0 0 0 0
.................................................CGTAAGTCAAGGCTGCTG........................................................................................................................................................................................ 18 2 4 0.25 1 0 0 0 1 0 0 0
......................................................................................AACATTTATTATATTTTC................................................................................................................................................... 18 1 5 0.20 1 0 0 0 1 0 0 0
................................................................................................................................................................TAGTAATTGAACTTAGTA......................................................................... 18 2 10 0.10 1 1 0 0 0 0 0 0
...................................................................................................................................................................TAATTGAACTTAGTACG....................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0
...............................................................................................................................................................ATAGTAATTGAACTTAGT.......................................................................... 18 2 20 0.05 1 1 0 0 0 0 0 0
...........................................................................................TTATTTTCTTTTCAAAGCAGT........................................................................................................................................... 21 3 20 0.05 1 0 0 0 1 0 0 0
.................................................CGTAAGTCAAGGCTGCTGG....................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1 0

Anti-sense strand reads

GGGCTCAAGAGGGCATTGGTCTAGTTCCTGATGGTCTTCTGGAAGTTATGCATTCACTTCCGGCGACTCATTAGAAAGGAAACCCCTTGTAAATAAAATAAAAGTTACGCCAACTTTAACTTATCGCTTAATACTTAAGTCAACGGCGTCGAATTCACTTATATTTAACTTGAATCATTCAAGTGTTTCTGGTCTTCGCGATCTGTGTGAGAATACATAATGTATGTAAATTTTTAGCTTAAAATACGTTG
**************************************************...((.......((((......(((...(((((..(((((((((((((((((....((((((...((((((((............))))))))))))))....))))))).))))))............)))).)))))...)))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V058
head
 V120
male body		 V052
head
..........................................................................................................................................................................................TTCTGGTCTTCGCGATCTGTG............................................ 21 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................................TGGGAATTCGTAATGTATGTA....................... 21 3 5 0.20 1 0 0 1 0
.......................................................................................................................................................................................................GATCTGTGTGAGGATGGATA................................ 20 3 5 0.20 1 0 1 0 0
..................................................................................................................................................................................................TTCGCGGTCTGTCTGAGA....................................... 18 2 6 0.17 1 0 0 0 1
........................................GGAAGTTATGCACTCCATT................................................................................................................................................................................................ 19 3 14 0.07 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2R:5503687-5503937 - dya_459 CCCGAGTTCTCCCGTAACCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTGAAGGCCGCTGAGTA-------ATCTTT-----------------------------------------------------------------------------CCTTTGGGGAA--CATTTATTTTAT------------------------------------------------------------------------------------------------------------TTTCA----------ATGC---------------------------------------------------GGTTGAAATT--GA---ATAGCGAATTATGA-----------------------------------------ATTCAGTTGCCGCAGCTTAAGTGAATATAAATTGAACTTAGTAAGTTCACAAAG----------------ACCAGAAGCGCTAGACACACTCTTAT----GTATTACATACATTTAAA--------AATCG------AATTTTATGCAAC
droEre2 scaffold_4845:5282128-5282428 + CCCGAGTTCTCCCGTAACCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTGAAGGCCGTTGAGTA-------ATCTTT-----------------------------------------------------------------------------ACTTTTGGGAA--TA--------------------------------------------------------------TAATATTGCGAGAATTATGTTTTCTGAATAGGAGATAACATATTTTTTT--TTTATCTTGA----------AAGC---------------------------------------------------GGTTGAAATTTTAA-----------------------------------------------TTAATAAATAAATACAGCTCACGCAGCTTTAA-AAATATGAATCGAGCATAGTAAGTGTAATATG----------------ATTAAACGCGTGAGACACACACTTATATGTATATTACATACATTTGAA-ATGTAATAA---------TTTTTTTTGCAAT
droSec2 scaffold_7:2615838-2615944 - CCCGAGTTCTCCCGTAACCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTGAAGGCCGCCGAGCA-------ATCTTT-----------------------------------------------------------------------------ACTTTTGTGAA--CCCTTGGT-----------CCAGTGCCAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2l:18542627-18542980 - dsi_17227 CCCGAGTTCTCCCGTAACCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTGAAGGCCGCCGAGCA-------AACTTT-----------------------------------------------------------------------------ACTTTTGTGAA--CCCTTGGT-----------CCAGAGCCAATTTAAATTATATGC-------AATATAAATTATATTGATATTGCGAAAAGGAGTTGTTCTGTGTGGGAGCCAAACTTTTGTTTAATTTTTTTTTTA----------AAACACCTGA----GCAG---------------------------------AATCCGTTGGAATAATAGTAGTTCA-------TAATAGGAAACGATGCTTAGGGTCATCTCTAGATTATAAA----ATACA-------------------------------GCTAATAAGTGCACTA------------------ATTATAACCATTAGGCACACTTCTAA----TCATTACAAACCTTTGTA--------TA---------TCTTTAATGCAAG
dm3 chr2L:18986420-18986721 - CCCGAGTTCTCCCGTAACCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTGAAGGCCGCCGAGCA-------ATATTT-----------------------------------------------------------------------------ACTTTTG-------------T-----------CCAGAGCCACTTTAAG----GCGC-------AATATAAATTATATTAATATGGCGAAAAGGA---------------AGCCAACATTTTGTTTA--TTGTTTTTGA----------AAACACCTGA----GCAA---------------------------------AATCCGTTGCAATAATAATAGTTTA-------TGATAAGTAACGA---------TCATCTCTAGATTATTAAATAAATACA---------------------------------------GTGTAC-------------------------------TAGACACACTTGTAT----ACATTACAAACGTTTGTAAATGTA--TA---------TCTATTACACAAG
droEug1 scf7180000409463:1319174-1319335 - CCCGAGTTCTCCCGGAACCAGATCAAGGACTACCAAAAGACCTTTAACACGTAAGTCTAGTTCGCAGTTT-CTGTTTATT----GAAAAAATGAATAAGAAGCTGCAAAAAGATAAATTTGTTAAAAGTAGTTCTTAAATTTTAATGAATTATTTAAAATGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------------
droBia1 scf7180000302422:4669330-4669434 + CCCGAGTTCTCCCGGAACCAGATCAAGGACTACCAGAAGACCTTCAACACGTAAGTCAAGGCCGCCGTTCG-------AGATTA-----------------------------------------------------------------------------TCTTTAAGGACACCTCTTAT----------------------------------------------------------------------------------------------------CTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------------
droTak1 scf7180000415357:128778-128842 - CCCGAGTTCTCGCGGAACCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTCAAGGCCGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491046:4017521-4017608 + CACGAGTTCTCCAGGAAGCAGATCAAGGACTACCAAAAGACCTTCAACACGTAAGTCACGGCCACCAATT-CTGAGTAACC-TT-----------------------------------------------------------------------------ACTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------
droRho1 scf7180000777836:22852-23051 - TTTTTGTTGGAC--------------------------------------------------------------------------------------------------------------------------------------------------------------AA--CATTCTTTTTATCATTAATTCTGAA---TTTTAAAATATAAGCTCAACCAAATACTAATTACTTTTCTAATGCAA---------------------------------------------------------TTTA---------------GGAAATAGAATTGAAGAACTTTCTAAAAGTTTTGTGTTTT--------------------TTTGTAATTATAT-------------------------------------------------------------------------------------------------------------TAAAAAGTGCTGGGTATTTTTTT-------TAATTTATATATTAAAT--------TATAG------TACTTACTGCAG-
droFic1 scf7180000454144:561636-561706 + CACGAGTTCTCTAGGAAGCAGATTAAGGACTACCAGAAGACCTTTAACACGTAAGTCGAGGCCTCAGTGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302570:608576-608835 + CATGAGTTCTCCAGGAAGCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTCAAGGCCAGAGATT-ATGGGGG------------------------------------------------------------------------------------CTGTAAAGATACTGGTTGT----------------------------------------------------------------------------------------------------TTAT---------TTTGGGGTTTAATTTTAACACCTTGAAGACCAACAAAAAAGTCTAGGAATTATCTAAGATTTTATTTTATT--------------------TGAATTATTA-----------------------------------------TTTC--TTGCATCAACTT-----------------------------CTTAAAGTTTAAAGCTTGCCAAGAACTG---ATTTAATTATTCATT----------------TCGCTTTAT--------AATTGAATTTT-------------
droAna3 scaffold_12916:5900801-5900888 - CATGAGTTCTCCAGGAAGCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTGAAGGCCGTTTGCA-GTGGC--ATC-------------------------------------------------------------------------------------------------TATTCTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------
droBip1 scf7180000396568:942950-943051 + CATGAGTTCTCCAGGAAGCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTCAAGGCCAATAGCT-ATAGC--ATCGTA-----------------------------------------------------------------------------GCTATGGAAAA--TAATTGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------
dp5 4_group3:7958984-7959042 + CACGAGTTTTCGCGCAAGCAAATCAAGGACTACCAAAAGACCTTCAATACGTAAGTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_1:9408810-9408868 + CACGAGTTTTCGCGCAAGCAAATCAAGGACTATCAAAAGACCTTCAATACGTAAGTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004585:4429324-4429388 - CATGAGTTTTCCCGTAAACAAATCAAGGACTACCAAAAGACCTTCAATACGTAAGTCAAGGCCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:16139105-16139161 + CATGAGTTTACGCGCAAGCAAATCAAGGATTATCAGAAGACCTTCAATACGTAAGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:5599475-5599530 + CATGAATTTTCGCGCAAGCAAATCAAGGACTATCAAAAGACCTTCAATACGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:13567441-13567498 + CATGAATTTTCGCGCAAGCAAATCAAGGACTATCAGAAGACATTCAATACGTAAGTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CCCGAGTTCTCCCGTAACCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTGAAGGCCGCTGAGTA-------ATCTTT-----------------------------------------------------------------------------CCTTTGGGGAA--CATTTATTTTAT------------------------------------------------------------------------------------------------------------TTTCA----------ATGC---------------------------------------------------GGTTGAAATT--GA---ATAGCGAATTATGA-----------------------------------------ATTCAGTTGCCGCAGCTTAAGTGAATATAAATTGAACTTAGTAAGTTCACAAAG----------------ACCAGAAGCGCTAGACACACTCTTAT----GTATTACATACATTTAAA--------AATCG------AATTTTATGCAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............GTAACCAGATCAAGGACTACCAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000000002
......................TCAAGGACTACCAGAAGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000000000
..........CCCGTAACCAGATCAAGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000
........................AAGGACTACCAGAAGACCTTCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000100000
..................................................................................................................................................................................................................................................................................................................................................................................................GAATTATGA-----------------------------------------ATTCAGTTGCCGC.........................................................................................................................................2211.00100100000000
...........CCGTAACCAGATCAAGGACTACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000
droEre2
CCCGAGTTCTCCCGTAACCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTGAAGGCCGTTGAGTA-------ATCTTT-----------------------------------------------------------------------------ACTTTTGGGAA--TA--------------------------------------------------------------TAATATTGCGAGAATTATGTTTTCTGAATAGGAGATAACATATTTTTTT--TTTATCTTGA----------AAGC---------------------------------------------------GGTTGAAATTTTAA-----------------------------------------------TTAATAAATAAATACAGCTCACGCAGCTTTAA-AAATATGAATCGAGCATAGTAAGTGTAATATG----------------ATTAAACGCGTGAGACACACACTTATATGTATATTACATACATTTGAA-ATGTAATAA---------TTTTTTTTGCAATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................GGACTACCAGAAGACCTTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
.................................................................TGAGTA-------ATCTTT-----------------------------------------------------------------------------ACTTTTGGG................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
droSec2
CCCGAGTTCTCCCGTAACCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTGAAGGCCGCCGAGCA-------ATCTTT-----------------------------------------------------------------------------ACTTTTGTGAA--CCCTTGGT-----------CCAGTGCCAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....GTTCTCCCGTAACCAGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
droSim2
CCCGAGTTCTCCCGTAACCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTGAAGGCCGCCGAGCA-------AACTTT-----------------------------------------------------------------------------ACTTTTGTGAA--CCCTTGGT-----------CCAGAGCCAATTTAAATTATATGC-------AATATAAATTATATTGATATTGCGAAAAGGAGTTGTTCTGTGTGGGAGCCAAACTTTTGTTTAATTTTTTTTTTA----------AAACACCTGA----GCAG---------------------------------AATCCGTTGGAATAATAGTAGTTCA-------TAATAGGAAACGATGCTTAGGGTCATCTCTAGATTATAAA----ATACA-------------------------------GCTAATAAGTGCACTA------------------ATTATAACCATTAGGCACACTTCTAA----TCATTACAAACCTTTGTA--------TA---------TCTTTAATGCAAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............TAACCAGATCAAGGACTACCAGAAGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
.........................AGGACTACCAGAAGACCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
...............AACCAGATCAAGGACTACCAGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.......................CAAGGACTACCAGAAGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
............CGTAACCAGATCAAGGACTACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.............GTAACCAGATCAAGGACTACCAGAAGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000000000000000
.........TCCCGTAACCAGATCAAGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
................ACCAGATCAAGGACTACCAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
dm3
CCCGAGTTCTCCCGTAACCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTGAAGGCCGCCGAGCA-------ATATTT-----------------------------------------------------------------------------ACTTTTG-------------T-----------CCAGAGCCACTTTAAG----GCGC-------AATATAAATTATATTAATATGGCGAAAAGGA---------------AGCCAACATTTTGTTTA--TTGTTTTTGA----------AAACACCTGA----GCAA---------------------------------AATCCGTTGCAATAATAATAGTTTA-------TGATAAGTAACGA---------TCATCTCTAGATTATTAAATAAATACA---------------------------------------GTGTAC-------------------------------TAGACACACTTGTAT----ACATTACAAACGTTTGTAAATGTA--TA---------TCTATTACACAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............TAACCAGATCAAGGACTACCAGAAGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TCAAGGACTACCAGAAGACCTTCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000010110000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TCAAGGACTACCAGAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TCAAGGACTACCAGAAGACCTTCAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ACCAGATCAAGGACTACCAGAAGACCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..CGAGTTCTCCCGTAACCAGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CCCGTAACCAGATCAAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TCAAGGACTACCAGAAGACCTTCAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ACCAGATCAAGGACTACCAGAAGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATCAAGGACTACCAGAAGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AAGTGAAGGCCGCCGAGCA-------AT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.........................AGGACTACCAGAAGACCTTCAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.............GTAACCAGATCAAGGACTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TAACCAGATCAAGGACTACCAGAAGACCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AAGTAACGA---------TCATCTCTAGAT................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................TCAAGGACTACCAGAAGACCTTCAATACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CAGATCAAGGACTACCAGAAGACCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------------------------------GTGTAC-------------------------------TAGACACACTTGT........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CCGAGTTCTCCCGTAACCAGATCAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TG-------------T-----------CCAGAGCCACTTTAAG----GC...................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GATCAAGGACTACCAGAAGACCTTCAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ACCAGATCAAGGACTACCAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................................................................................................................................................................................CCTGA----GCAA---------------------------------AATCCGTTGG........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..................................................................................................................................................................................................................................................ATGGCGAAAAGGA---------------AGCCAAC.....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.................CCAGATCAAGGACTACCAGAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................A--TTGTTTTTGA----------AAACACCTGA----GCAA---------------------------------..................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..............TAACCAGATCAAGGACTACCAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TCAAGGACTACCAGAAGACCTTCAATAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGGACTACCAGAAGACCTTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGATTATTAAATAAATACA---------------------------------------GTGT......................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................CAATACGTAAGTGAAGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................AGATCAAGGACTACCAGAAGACCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................GGACTACCAGAAGACCTTCAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................CAAGGACTACCAGAAGACCTTCAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AATACGTAAGTGAAGGCCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.....GTTCTCCCGTAACCAGATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................ACCTGA----GCAA---------------------------------AATCCGTTGCA.......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................ACCAGATCAAGGACTACCAGAAGACCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................G-------------T-----------CCAGAGCCACTTTAAG----GCG..................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........TCCCGTAACCAGATCAAGGACTACCAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TTTA--TTGTTTTTGA----------AAACACCTGA----GCAA---------------------------------..................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........CCGTAACCAGATCAAGGACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ACTACCAGAAGACCTTCAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
....................GATCAAGGACTACCAGAAGACCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----ACATTACAAACGTTTGTAA...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................AAGGACTACCAGAAGACCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AACCAGATCAAGGACTACCAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................................GAAAAGGA---------------AGCCAACATTT.................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAAGGACTACCAGAAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................TCAAGGACTACCAGAAGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AACCAGATCAAGGACTACCAGAAGACCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................ATATGGCGAAAAGGA---------------AGGA........................................................................................................................................................................................................................................................................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
droEug1
CCCGAGTTCTCCCGGAACCAGATCAAGGACTACCAAAAGACCTTTAACACGTAAGTCTAGTTCGCAGTTT-CTGTTTATT----GAAAAAATGAATAAGAAGCTGCAAAAAGATAAATTTGTTAAAAGTAGTTCTTAAATTTTAATGAATTATTTAAAATGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------------SizeHit CountTotal NormTotal
No Reads
droBia1
CCCGAGTTCTCCCGGAACCAGATCAAGGACTACCAGAAGACCTTCAACACGTAAGTCAAGGCCGCCGTTCG-------AGATTA-----------------------------------------------------------------------------TCTTTAAGGACACCTCTTAT----------------------------------------------------------------------------------------------------CTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCCGAGTTCTCGCGGAACCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTCAAGGCCGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CACGAGTTCTCCAGGAAGCAGATCAAGGACTACCAAAAGACCTTCAACACGTAAGTCACGGCCACCAATT-CTGAGTAACC-TT-----------------------------------------------------------------------------ACTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTTTTGTTGGAC--------------------------------------------------------------------------------------------------------------------------------------------------------------AA--CATTCTTTTTATCATTAATTCTGAA---TTTTAAAATATAAGCTCAACCAAATACTAATTACTTTTCTAATGCAA---------------------------------------------------------TTTA---------------GGAAATAGAATTGAAGAACTTTCTAAAAGTTTTGTGTTTT--------------------TTTGTAATTATAT-------------------------------------------------------------------------------------------------------------TAAAAAGTGCTGGGTATTTTTTT-------TAATTTATATATTAAAT--------TATAG------TACTTACTGCAG-SizeHit CountTotal NormTotal
No Reads
droFic1
CACGAGTTCTCTAGGAAGCAGATTAAGGACTACCAGAAGACCTTTAACACGTAAGTCGAGGCCTCAGTGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CATGAGTTCTCCAGGAAGCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTCAAGGCCAGAGATT-ATGGGGG------------------------------------------------------------------------------------CTGTAAAGATACTGGTTGT----------------------------------------------------------------------------------------------------TTAT---------TTTGGGGTTTAATTTTAACACCTTGAAGACCAACAAAAAAGTCTAGGAATTATCTAAGATTTTATTTTATT--------------------TGAATTATTA-----------------------------------------TTTC--TTGCATCAACTT-----------------------------CTTAAAGTTTAAAGCTTGCCAAGAACTG---ATTTAATTATTCATT----------------TCGCTTTAT--------AATTGAATTTT-------------SizeHit CountTotal NormTotal
No Reads
droAna3
CATGAGTTCTCCAGGAAGCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTGAAGGCCGTTTGCA-GTGGC--ATC-------------------------------------------------------------------------------------------------TATTCTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................AGTGAAGGCCGTTTGCA-GTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
droBip1
CATGAGTTCTCCAGGAAGCAGATCAAGGACTACCAGAAGACCTTCAATACGTAAGTCAAGGCCAATAGCT-ATAGC--ATCGTA-----------------------------------------------------------------------------GCTATGGAAAA--TAATTGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------SizeHit CountTotal NormTotal
No Reads
dp5
CACGAGTTTTCGCGCAAGCAAATCAAGGACTACCAAAAGACCTTCAATACGTAAGTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................AATCAAGGACTACCAAAAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000002
.ACGAGTTTTCGCGCAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010000000
...GAGTTTTCGCGCAAGCAAATCAAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010000
droPer2
CACGAGTTTTCGCGCAAGCAAATCAAGGACTATCAAAAGACCTTCAATACGTAAGTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CATGAGTTTTCCCGTAAACAAATCAAGGACTACCAAAAGACCTTCAATACGTAAGTCAAGGCCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................AAGGACTACCAAAAGACCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00211000
........TTCCCGTAAACAAATCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
droVir3
CATGAGTTTACGCGCAAGCAAATCAAGGATTATCAGAAGACCTTCAATACGTAAGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......TTACGCGCAAGCAAATCAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
CATGAATTTTCGCGCAAGCAAATCAAGGACTATCAAAAGACCTTCAATACGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CATGAATTTTCGCGCAAGCAAATCAAGGACTATCAGAAGACATTCAATACGTAAGTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................GACTATCAGAAGACATTCAATAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
......................TCAAGGACTATCAGAAGACATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110

Generated: 05/17/2015 at 10:35 PM