ID:

dya_435

 Coordinate:

2R:1339509-1339659 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.5 -14.4 -14.3

Flybase annnotation

exon [dyak_GLEANR_13133:1]; CDS [Dyak\GE12920-cds]; intron [Dyak\GE12920-in]

Repeatable elements

NameClassFamilyStrand
BATUMI_I-intLTRPao-

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGAACACCTTCCTCACAGAACGCCATCGAACCCTAGAGGCCATCGATGATGTGAGACTGACCGTACCAAGTCAGTCGCACTCAAAAGCGATGAATTCAAGTGGGTCCTCTAGAAAAATAAGTTCCTACGAGACGAAAGTGGATCCAATATCCAAAAGTTGCGACTTGTGCAACAGGAAAACCATCCCGTCCGTGTATGTACTCGTTCTCTCCAGATGTCGGTTGACGACCGGCCAGCCTACATTAAACGGA
***************************************************************.....(((..(((((........)))))..))).....((((((.((..........((....))........)).))))))********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 GSM1528802
follicle cells		 V058
head
...............................................................TACCAAGTCAGTCGCACTCAAAAGC................................................................................................................................................................... 25 0 1 3.00 3 2 0 1 0
.....................................................................................................................................................................................................................GATGTCGGCTGACGACCGGGCAT............... 23 3 1 2.00 2 2 0 0 0
.........................................................................................................................................................................................................TCGTTCTCTCCAGATGTCGGTTGACGAC...................... 28 0 1 1.00 1 1 0 0 0
........................................................................................................................GTTCCTACGAGACGAAAGTGGATCC.......................................................................................................... 25 0 1 1.00 1 1 0 0 0
................................................................................TCAAAAGCCATGAATTCAAGTGGG................................................................................................................................................... 24 1 1 1.00 1 0 1 0 0
............................................................................................................................................................................................................TTCTCTCCAGATGTCGGTTGACGGCC..................... 26 1 1 1.00 1 1 0 0 0
.........................................................................................................CCTCTAGAAAAATAAGTTCCTACGAG........................................................................................................................ 26 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................TTCGACTTGTGCAACAGGAAAACC..................................................................... 24 1 2 0.50 1 0 1 0 0
....................................................................................................................................................................................................................CGATGTCGGCTGACGACCG.................... 19 2 2 0.50 1 1 0 0 0
....................................................................................................................................................................................................................CGATGTCGGCTGACGACCGGGC................. 22 3 2 0.50 1 1 0 0 0
........................................................................................GATGAATTCAAGTGGGTCCTCTAGA.......................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
.........TCCTCACAGAACGCCATCGAACCCTA........................................................................................................................................................................................................................ 26 0 18 0.22 4 4 0 0 0
.........TCCTCACAGAACGCCATCGAACCCT......................................................................................................................................................................................................................... 25 0 18 0.22 4 4 0 0 0
............TCACAGAACGCCATCGAACCCTAGAGGC................................................................................................................................................................................................................... 28 0 11 0.09 1 1 0 0 0
.........TCCTCACAGAACGCCATCGAACCCTAGA...................................................................................................................................................................................................................... 28 0 13 0.08 1 1 0 0 0
..........CCTCACAGAACGCCATCGAACCCTAGAA..................................................................................................................................................................................................................... 28 1 14 0.07 1 1 0 0 0
............TCACAGAACGCCATCGAACCCTAG....................................................................................................................................................................................................................... 24 0 15 0.07 1 1 0 0 0
............TCACAGAACGCCATCGAACCCTAGA...................................................................................................................................................................................................................... 25 0 15 0.07 1 1 0 0 0
.......CTTCCTCACAGAACGCCATCGAACCC.......................................................................................................................................................................................................................... 26 0 19 0.05 1 0 1 0 0
.........TCCTCACAGAACGCCATCGAACCC.......................................................................................................................................................................................................................... 24 0 19 0.05 1 1 0 0 0
..........CCTCACAGAACGCCATCGAACCCTA........................................................................................................................................................................................................................ 25 0 19 0.05 1 1 0 0 0
..........CCTCACAGAACGCCATCGAACCCT......................................................................................................................................................................................................................... 24 0 19 0.05 1 1 0 0 0
.........TCCTCACAGAACGCCATCGAACC........................................................................................................................................................................................................................... 23 0 19 0.05 1 1 0 0 0
.........TCCTCACAGAACGCCATCGAAC............................................................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0
..........CCTCACAGTACGCCATCGAACCCTA........................................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0
..........CCTCACAGAACGCCATCGAACC........................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0
.........................TCGAACCCTAGAGGCCATCGATGATG........................................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................GTTTCTGTGCTCGTTCTCT......................................... 19 3 20 0.05 1 0 0 0 1
..........CCTCACAGAACGCCATCGAACCCTATT...................................................................................................................................................................................................................... 27 2 20 0.05 1 1 0 0 0
............TCACAGAACGCCATCGAACCC.......................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

ACTTGTGGAAGGAGTGTCTTGCGGTAGCTTGGGATCTCCGGTAGCTACTACACTCTGACTGGCATGGTTCAGTCAGCGTGAGTTTTCGCTACTTAAGTTCACCCAGGAGATCTTTTTATTCAAGGATGCTCTGCTTTCACCTAGGTTATAGGTTTTCAACGCTGAACACGTTGTCCTTTTGGTAGGGCAGGCACATACATGAGCAAGAGAGGTCTACAGCCAACTGCTGGCCGGTCGGATGTAATTTGCCT
**********************************************************************************************************.....(((..(((((........)))))..))).....((((((.((..........((....))........)).))))))*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528802
follicle cells		 M043
female body
 M056
embryo
 V120
male body		 M026
head
 V052
head
...............................................................................................................................................................................CTTTTGGTAGGGCAGGCACATACAT................................................... 25 0 1 20.00 20 19 1 0 0 0 0
..............................................................................................................................................................................CCTTTTGGTAGGGCAGGCACATACAT................................................... 26 0 1 19.00 19 12 3 1 2 0 1
.........................................................................................................................................................................................................AGCAAGAGAGGTCTACAGCCAACTGCT....................... 27 0 1 11.00 11 11 0 0 0 0 0
...........................................................................................................................................................................................................................CCAACTGCTGGCCGGTCGGATGTAAT...... 26 0 1 6.00 6 0 5 1 0 0 0
...............................................................................................................................................................................CTTTTGGTCGGGCAGGCACATACAT................................................... 25 1 1 6.00 6 6 0 0 0 0 0
..............................................................................................................................................................................CCTTTTGGTCGGGCAGGCACATACAT................................................... 26 1 1 6.00 6 6 0 0 0 0 0
......................................................................................................CCAGGAGATCTTTTTATTCAAGGATGCT......................................................................................................................... 28 0 1 3.00 3 2 1 0 0 0 0
............................................................................................................................................................................................................................CAACTGCTGGCCGGTCGGATGTAAT...... 25 0 1 3.00 3 0 2 0 1 0 0
...................TGCGGTAGCTTGGGATCTCCGGTAGCT............................................................................................................................................................................................................. 27 0 5 2.60 13 13 0 0 0 0 0
................................................................................................................................................................................................................GAGGTCTACAGCCAACTGCTGGCCGGT................ 27 0 1 2.00 2 2 0 0 0 0 0
..............................................ACTACACTCTGACTGGCATGGTTCAGT.................................................................................................................................................................................. 27 0 1 2.00 2 0 2 0 0 0 0
................................................TACACTCTGACTGGCATGGTTCAGT.................................................................................................................................................................................. 25 0 1 2.00 2 0 2 0 0 0 0
..................................................CACTCTGACTGGCATGGTTCAGT.................................................................................................................................................................................. 23 0 1 2.00 2 0 2 0 0 0 0
.........................................................................................................................................................................................GGCAGGCACATACATGAGCAAGAGAG........................................ 26 0 1 2.00 2 0 2 0 0 0 0
.................................................................................................................................................................................GTTGGTAGGGCAGGCACATACAT................................................... 23 1 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................CCACCTAGGTTATAGGTTTTCAA............................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0
...........................................................TGGCATGGTTCAGTCAGCGTGAGTTT...................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0
..........................................AGCTACTACACTCTGACTGGCATGGTT...................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................................................CAGCCAACTGCTGGCCGGTCGGATGT......... 26 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................AGGTTATAGGTTTTCAAGGCTGAACA................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
............................................................GGCATGGTTCAGTCAGCGTGAGTTT...................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0
.................................................................................................................................................................................................................................GCTGGCCGGTCGGATGTAAT...... 20 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................ACAGCCAACTGCTGGCCGGTCGGAT........... 25 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................................................TGTCCTTTTGGTAGGGCAGGCACAT....................................................... 25 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................TCTGCTTTCACCTAGGTTATAGGTTT................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................GGATGCTCTGCTTTCACCTAGGTT........................................................................................................ 24 0 1 1.00 1 0 0 0 1 0 0
......................................................................................................CCAGGAGATCTTTTTATTCAAGGATGC.......................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
...........................................GCTACTACACTCTGACTGGCATGGT....................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
........................................................................TCAGCGTGAGTTTTCGCTACTTAAGT......................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0
...........................................................................................................................................................................................................................CCAACTGCTGGCCGGTCTGATGTAAT...... 26 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................................................CTTTTGGTAGGGCAGGAACATACAT................................................... 25 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................TCAAGGATGCTCTGCTTTCACCTAGGTT........................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................GGAGATCTTTTTATTCTAGGATGCT......................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................................GTAGGGCAGGCACATACAT................................................... 19 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................................................CTTTTGGTAGGGCAGGCTCATACAT................................................... 25 1 1 1.00 1 1 0 0 0 0 0
...........................................................TGGCATGGTTCAGTCAGCGTGAGTT....................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................CAAGGATGCTCTGCTTTCACCTAGGT......................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................TTTGGTAGGGCAGGCACATACAT................................................... 23 0 1 1.00 1 0 1 0 0 0 0
...............................................CTACACTCTGACTGGCAGGGTTCAGT.................................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................ACTGCTGGCCGGTCGGATGTAAT...... 23 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................................................TGTCCTTTTGGTAGGGCAGGCACA........................................................ 24 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................................GAGCAAGAGAGGTCTACAGCCAAC........................... 24 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................TCAAGGATGCTCTGCTTTCACCTAGGT......................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................................GAGCAAGAGAGGTCTACAGCCAACT.......................... 25 0 1 1.00 1 0 0 0 1 0 0
...............................................................................................................................................................................CTTTTGGTAGCGCAGGCACATACAT................................................... 25 1 1 1.00 1 1 0 0 0 0 0
.................................................ACACTCTGACTGGCATGGTTCAGT.................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................AGCCAACTGCTGGCCGGTCGGATGTAAT...... 28 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................................................................CAGGCACATACATGAGCAAGAGAGGTC..................................... 27 0 1 1.00 1 0 0 0 0 1 0
.......................................GGTAGCTACTACACTCTGACTGGCA........................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................................................................................GCAGGCACATACATGAGCAAGAGAGGT...................................... 27 0 1 1.00 1 0 1 0 0 0 0
...............................................................ATGGTTCAGTCAGCGTGAGTTTTGG................................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0
....................................................................TCAGTCAGCGTGAGTTTTCGCTACTT............................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................ACTGCTGGCCGGTCGGATGTAATT..... 24 0 1 1.00 1 0 1 0 0 0 0
..........................................................................AGCGTGAGTTTTCGCTACTTAAGTT........................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0
.....................CGGTAGCTTGGGATCTCCGGTAGCT............................................................................................................................................................................................................. 25 0 5 0.60 3 0 3 0 0 0 0
.....................................................................................TCGCTACTTAAGTTCACCCAGGAGATCTT......................................................................................................................................... 29 0 2 0.50 1 0 0 1 0 0 0
.............................................................................................................ATCTTTTTATTCAAGGATGCTCTGCTT................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0 0
..........................................................................................ACTTAAGTTCACCCAGGAGATCTTTTT...................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0 0
...........................................................................................................AGATCTTTTTATTCAAGGATGCTCT....................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0 0
.....................................................................................TCGCTACTTAAGTTCACCCAGGAGAT............................................................................................................................................ 26 0 2 0.50 1 0 0 1 0 0 0
......................................................................................CGCTACTTAAGTTCACCCAGGAGATCT.......................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0 0
......................................................................................................CCAGGAGATCTTTTTATTCA................................................................................................................................. 20 0 2 0.50 1 0 0 0 0 1 0
......................................................................................CGCTACTTAAGTTCACCCAGGAGATCTT......................................................................................................................................... 28 0 2 0.50 1 0 0 1 0 0 0
..............................................................................................AAGTTCACCCAGGAGATCTTTTTATT................................................................................................................................... 26 0 2 0.50 1 0 0 1 0 0 0
............................................................................................................................................................CAACGCTGAACACGTTGTCCTTTTGGT.................................................................... 27 0 2 0.50 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................CCAACTGCTGGCCGGTCCGATGTAAT...... 26 1 3 0.33 1 0 1 0 0 0 0
....................GCGGTAGCTTGGGATCTGCGGTAGCT............................................................................................................................................................................................................. 26 1 6 0.33 2 0 2 0 0 0 0
....GTGGAAGGAGTGTCTTGCGGTAGCTT............................................................................................................................................................................................................................. 26 0 14 0.29 4 0 4 0 0 0 0
.....................................................................................CCGCTACTTAAGTTCACCCAGGAGAT............................................................................................................................................ 26 1 4 0.25 1 0 0 1 0 0 0
....................GCGGTAGCTTGGGATCTCCGGTAGCT............................................................................................................................................................................................................. 26 0 5 0.20 1 0 0 0 1 0 0
..........GGAGTGTCTTGCGGTAGCTTGGGAT........................................................................................................................................................................................................................ 25 0 19 0.16 3 0 3 0 0 0 0
....................GCGGTAGCTTGGGATCCCCGGTAGC.............................................................................................................................................................................................................. 25 1 8 0.13 1 0 1 0 0 0 0
....................GCGGTAGCTTGGGATCTCCGGTAGC.............................................................................................................................................................................................................. 25 0 8 0.13 1 0 1 0 0 0 0
...TGTGGAAGGAGTGTCTTGCGGTAGCT.............................................................................................................................................................................................................................. 26 0 17 0.12 2 2 0 0 0 0 0
..............................GGGATCTCCGGTAGCTACTACACTCT................................................................................................................................................................................................... 26 0 20 0.10 2 0 2 0 0 0 0
...............GTCTTGCGGTAGCTTGGGATCTCCGGT................................................................................................................................................................................................................. 27 0 11 0.09 1 0 1 0 0 0 0
...............GTCTTGCGGTAGCTTGGGATCTCCGG.................................................................................................................................................................................................................. 26 0 11 0.09 1 0 0 1 0 0 0
...................TGCGGTAGCTTGGGATCTCCGGT................................................................................................................................................................................................................. 23 0 12 0.08 1 0 1 0 0 0 0
.................CTTGCGGTAGCTTGGGGTCTCCGGT................................................................................................................................................................................................................. 25 1 12 0.08 1 0 1 0 0 0 0
......................GGTAGCTTGGGATCTCCGGTA................................................................................................................................................................................................................ 21 0 12 0.08 1 0 1 0 0 0 0
...TGTGGAAGGAGTGTCTTGCGGTAGCTT............................................................................................................................................................................................................................. 27 0 13 0.08 1 1 0 0 0 0 0
.....TGGAAGGAGTGTCTTGCGGTAGCTT............................................................................................................................................................................................................................. 25 0 16 0.06 1 0 0 0 1 0 0
...TGTGGCAGGAGTGTCTTGCGGTAGCT.............................................................................................................................................................................................................................. 26 1 17 0.06 1 1 0 0 0 0 0
.....TGAAAGGCGTGTCTTGCGGTAGCTT............................................................................................................................................................................................................................. 25 2 18 0.06 1 1 0 0 0 0 0
........AAGGAGTGTCTTGCGGTAGCTTGGGAT........................................................................................................................................................................................................................ 27 0 18 0.06 1 0 1 0 0 0 0
..........GGAGTGTCTTGCGGTAGCT.............................................................................................................................................................................................................................. 19 0 20 0.05 1 0 0 0 1 0 0
............................TTGGGATCTCCGGTAGCTACTACAC...................................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
....GCGGAAGGAGTGTCTTGCGGTAGCT.............................................................................................................................................................................................................................. 25 1 20 0.05 1 0 1 0 0 0 0
.............................TGGGATCTCCGGTAGCTACTACACTCT................................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
.......GAAGGAGTGTCTTGCGGTAGCTT............................................................................................................................................................................................................................. 23 0 20 0.05 1 0 1 0 0 0 0
.................................................ACACTCTGGCTGGCATGGTTCAGT.................................................................................................................................................................................. 24 1 20 0.05 1 0 1 0 0 0 0
..........GGAGTGTCTTGCGGTAGCTT............................................................................................................................................................................................................................. 20 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................................................................................................TGGCCTGTCGGATGTAATTTGCCT 24 1 20 0.05 1 0 0 1 0 0 0
............................TTGGGATCTCCGGTAGCTACTACACTCT................................................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0
.....TGGAAGGAGTGTCTTGCGGTAGCT.............................................................................................................................................................................................................................. 24 0 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2R:1339459-1339709 - dya_435 TGAACACCTTCCTCACAGAACGCCATCGAACCCTAGAGGCCATCGATGATGTGAGACTGACCGTACCAAGTCAGTCGCACTCAAAAGCG----------------------------------------ATGA-ATTCAAG-----------TGGGTCCTCTAGAAAAATAAGTTCCTACGAGACGAAAGTGGATCCAAT-ATCCAAAAGTTGCGACTTGTGCAAC-AGGAAAACCATCCCGTCCGTGTATGTACTCGTTCTCTCCAGATGTCGGTTGACGACCGGCCAGCCTACATTAAACGGA
droEre2 scaffold_4845:1221150-1221353 + TGGCCACCTTCATTACACAATGACATCGAACTTAAGAATCTATAGTTAATTTACGGCCGTACATGACAAGTCA-------TCCAATGCA----------------------------------------CCAA-ATGCAAT-----------TGGGTCATCTCGAAGAATAGATTCTCAACAGACGAAAA----CCCA---AAACAAATGGTCCATCTTGTGTACCAAAGAAAATAATCCCATTCG-----------------------------------GCCAGCCAGCCTTCATTAAACGGA
droSec2 scaffold_4854:1025-1276 + TGAACACCTTCCTCACAGAACGTCATCGAACCCTAGAGGCCATCGATGATTTGAGACCGTCCGTACCAAGTCAGTCGCACTCCAAAGCG----------------------------------------ATAA-ACTCAAG-----------TGGGCCCTCTAGAAAACTAAATTCCTATGAGACGAAAGTGGCTCCAAA-ATCGAAAAGTTGCGACTTGTGCAACAAGGAAAACCATCCTGTCCGTGTATGTCCGCGTTTTCTCCAAATGTCGGTTGACGACCGGTCAGCCTATATTAAACGGA
droSim2 node_49172:73-322 - TGAACACCTTCCTCACAGAACGTCATCGAACCCTAGAGGCAATCGATGATGTGAGACCGTCCGTACCAAGTAAGTCGCACTCCAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTAGAAAAC--TATTCCTATGAGACGAAAGTGGCTCCAAA-ATCGAAAAGTTGCGACTTGTGCAACAAGGAAAACCATCCTGTCCGTGTATGTCCGCGTTTTCTCCAAATGTCGGTTGACGACCGATCAGCCTACATTAAACGGA
dm3 chrUextra:10669677-10669928 + TGAACACCTTCCTCACAGAACGTCATCGAACCCTAGAGGCCATCGATGATGTGAGACCGTCCGTACCAAGTCAGTCGCACTCCAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTAGAAAATTAAATTCCTATGAGACGAAAGTGGCTCCAAA-ATCGAAAAGTTGCGACTTGTGCAACAAGGAAAACCATCCTGTCCGTGTATGTCCGCGTTTTCTCCAAATGTCGGTTGACGACCGGTCAGCCTACATTAAACGGA
droEug1 scf7180000409051:13075-13326 + TAGATAACTTCCTGACAGAGCGCCATCGCACTCTGGAGGCCATCGACGACGTTAGGCCTAGTGGCTCCGGGCAATCTCCGCTAAGGTCG----------------------------------------GGAC-TTCCTGC-----------TGCCCCTGCACGGAGGCTCAATTCGTACGAGACTCGAGTGGCTCCGGG-CCAAAAGGGATGCGATCTCTGTTCGAGGGAGAACCACCCTATCCGCTTATGTCCGCGTTTCCTAGAAATGAACGTGGACGGGCGATCCGACTACATTAAAAGGA
droBia1 scf7180000301424:18553-18805 - TGAACGCATTTCTTACGGAGCGTCATTGGACCATAGAAGCCATCGACGATGTACTGCCGTCAGGTTCAAGCCAATCCCTGCCTAAGACA----------------------------------------TCCGTCCCCCAC-----------CGCAGCTCCTCGAAAAATAAATTCTAACGAGACAAGGGAAGCTCCCAA-GCCCAAAGGATGTGACCTTTGTAGGAAGGAAAACCATCCGGTCCGCACATGTTCACGATTTCTCTAGATAACGGTCGACGAACGGTTGGCATATACAAAAAGAA
droTak1 scf7180000413715:892-1144 + TGAACACCTTTCTCACTGAGCGCCATCGAACCCTCGAGGCCATAGATGACGTGCGACCTTCTGGGTCAAGTCATTCGCAGTCCAAAGCA----------------------------------------ACGA-ACGCTAG-----------CGGGTCTTTAAGCAGAATAAATTCTTATGAGACTAAGATAGTTCCGAAGACCGAGACGTTGCGATCTGTGCTCAAGGGAAAGCCACCCTATACGCACTTGTCCACGTTTCCTCCAAATGACAGTAGACGAGCGGGCCGCCTATATCCGAAACA
droEle1 scf7180000488519:10641-10892 + TGAACACCTTTCTCACTGAGCGCCATCGAACCCTCGAGGCCATAGATGACGTGCGACCTTCTCTGTCAAGTCATTCGCAGTCCAAAGCA----------------------------------------ACGA-ACGCTAG-----------CGGGTCTTTAAGCAAAATAAATTCTTATGAGACTAAGATAGTTCCGAA-ACCGAGACATTGCGATCTGTGCTCAAGGGAAAGCCACCCTATACGCACTTGTCCACGTTTCCTCCAAATGACAGTAGACGAGCGGGCCGCCTATATCCGAAACA
droRho1 scf7180000768738:778-1022 - TGAATGGGTTCCTAACTGAGCGTCACCGAACACTAGAAGCCATAGATGATGTGA-ACCATCAGGCTCTAGTCAGTCTCAGCCCAGAGCA----------------------------------------TCGA-TATCCAA-----------TTCTGTGTTTCGGAGGATAAATTCCTACGAGGCAAGGGTAGCACCCAG-ACCTATAGGGTGTGATTTGTGTAATCGGGAAAACCATCCCGTACGCACATGCCC-CGGTTTCTCCGGATGTCTGTCGATGT-----CCGATTACATAAAAAAGA
droFic1 scf7180000454124:3504-3755 - TAAATAATTTCCTCACTGAGCGTCACAGGACACTAGAGGCCATAGATGACGTCCGTCCGTCAGGCTCTAGTCAGCCTCAGCCCAGAGCA----------------------------------------GCAG-GTTCGAA-----------TTCCACGGCACGTAGGATCCATTCCTATGAAGCTAGAGTAGTACCCAG-AGGTAAAGGGTGCGACTTGTGCAATAGAGAAAACCATCCAGTGCGGACATGCGCACGGTTTCTCCGGATGTCTGTCGATGAGCGGTCCGCCTATATCAAAGGCA
droKik1 scf7180000301584:35372-35587 - TGAACACCTTCCTAAGCGAAAGATATCGCACATTAGAGGCCATCGAGGACATGAAGCCGAC---------------------------------------------------------------------------TCAAG-----------CAGTC--CCGGAAAAGCTTCAGTCCTTCGAAACGAAAGTCAGCACCAA-ACCAAAAGGGTGTGACTTATGCTCCAAGGAGAATCATCCAGTACGCTTATGCCCGCGCTTTCTCCAAATGTCCGTCGACGCGCGTTCCGGCTACATAAAAAAGA
droAna3 scaffold_2048:200-432 + TGAACTCGTTTCTCAGCGAACGATATCCCACCCTGGAAGCCATAGAGGATGTTAAACCCA---GCTC----CAACCGCCTTCAAAAAAC----------------------------------------ACAG-GC-----------------------TCAAAAAGGATCAACTCCTTTGAGACCAACGTGACGCAAGG-ACCCAAAAACTGTGACCTTTGCGCAAAAGAGAATCACCCAGTGCGGGTATGTTCTCGGTTTCTCCAAATGCCCGTCAGTGAACGATCCGCATATATAAGGAGAA
droBip1 scf7180000395486:1477-1728 + TAGACAACTTCCTGACAGAGCGCCATCGTACTCTGGAGGCCATCGAAGATGTCAGGACTAGTGGCTCCGTGCAATTTCCGCTAAGGTCG----------------------------------------GGAA-CTCCTAC-----------TGCTCCTGCTCGAAGGCTCCATTCATACGAGACTCGAGTGGTTCCGGG-CCCCAAGGGTTGCGATGTCTGTTCGAGGGAGAACCACCCCATTCGCTTATGTCCGCGGTTCTTGGAAATGGACGTAAATGGGCGCTCGGACTACATTAAAAGGA
dp5 Unknown_group_797:7948-8229 + TGGAATCCTTCCTCAGCCAGAGATACCTGACGCTCGAAGCCATCGAGGGAAACCCGTCCA---CTTCA-CACAGTCCGAAAGGTGATCC-----------------GAATCCGCCACCTTCCCGAAGCAACCC-GTTCCGCTCCCTAGGGAGTCCGGTTCCTAGGACGGTTCACTCCTTCGAGACAACCGTAAATCCGAA-CCGGAGAACGTGTGATTTTTGCGGGAAAGAGAATCACCCAATCCGGCTATGCCCGCACTTTCTCCAAATGAACGCTGATGCTCGTGCCAGCTGCATCAAACAAA
droPer2 scaffold_5515:615-887 + TGGACAAGTTCCTGGCGGAGCGGTACCTGTCTCTCGAAGTAACCGAGGACGACCATCAAGGCATGGAGACTCAGGCCCACTCCACGGCGAGCATACGCACTTCAGACAAT-------------------TCGA-GAAGCAA-----------TCCTTATCCTAGGAGTGTCCACTCGTTCGAGACCACAGTGAATCAAAC-GAGGAGCACGTGTGATCTCTGCTCCAAAGAGTATCATCCAATCCGTTTATGCCCTTACTTCCTTCAAATGCCCGCTGACGATCGCTCCGACTACATTAAGCAAA
droWil2 scf2_1100000004967:1005637-1005891 - TGGACAATTTCCTCACCGAGCGGTTTCGTACGCTCGAAGCGGTTGAAAATACCACCGCTAT-GGCTATTTCGGTTCCCACATCGAAACC-----------------------------TCCG-------CGAA-ATCCGCT-----------TCCAGCCACCCGAAAGGCTAATACATTTGAAGCCAAGGTGACCACCAA-ACCAAAATCCTGTGATCTCTGTATGAAGGAGAATCACCCGGTGCGTCGATGTCCCCGCTTCCTTCAGATGTCGGTGCCAGAGAGGGTGGCATACATAAAGAAAA
droVir3 scaffold_13049:24534209-24534454 + TGAATTCATTTCTGATCGACCGATATCGCACCTTGGAGGCGATAGAGGATGTACGACCTACCGCACATACGCCACCCCAGTCGAAACCC-----------------------------------------------ACAAG-----------AAAAGAGTCCAACCACCTGAGAACCTTCGAAGCAACAGTGACTACAAA-GTCGCAACACTGCAAATTGTGTCAGAAGGAAAACCATCCCGTGCGTCTATGCCCACGTTTTCTACAAATGTCCGTACCCGAGAGAGTTTCCGTCATTAAGCAAC
droMoj3 scaffold_4207:9145-9396 - TAAGCCTCTTCATTAGCGAGCATGCTCGCGCGCTTAAAGCTATGGAAGGTGACAGGTCCA---TCCCAAA----------------GGTCCCAGGTGCAGATCC--GAAA-------------------TCCA-CGGTCAC-----------CACCTCTCACAAAAGGGTCCATGCCTTCGAGACACAATTGACTCCGAA-GACCAAGAAATGCGACTTGTGCTCAAAAGAGAACCATCCGGTTCGATTGTGTCCTCGTTTCCTCCAAATGTCTCTGGCAACGCGCGAGACCTACATAAAGCGAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TGAACACCTTCCTCACAGAACGCCATCGAACCCTAGAGGCCATCGATGATGTGAGACTGACCGTACCAAGTCAGTCGCACTCAAAAGCG----------------------------------------ATGA-ATTCAAG-----------TGGGTCCTCTAGAAAAATAAGTTCCTACGAGACGAAAGTGGATCCAAT-ATCCAAAAGTTGCGACTTGTGCAAC-AGGAAAACCATCCCGTCCGTGTATGTACTCGTTCTCTCCAGATGTCGGTTGACGACCGGCCAGCCTACATTAAACGGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................TACCAAGTCAGTCGCACTCAAAAGC.........................................................................................................................................................................................................................2513.00302000000001
...............................................................................................................................................................................................................................................................TCGTTCTCTCCAGATGTCGGTTGACGAC......................2811.00101000000000
............................................................................................................................................................................GTTCCTACGAGACGAAAGTGGATCC............................................................................................................2511.00101000000000
.............................................................................................................................................................CCTCTAGAAAAATAAGTTCCTACGAG..........................................................................................................................2611.00101000000000
........................................................................................G----------------------------------------ATGA-ATTCAAG-----------TGGGTCCTCTAGA............................................................................................................................................2520.50101000000000
.........TCCTCACAGAACGCCATCGAACCCTA..............................................................................................................................................................................................................................................................................26180.22404000000000
.........TCCTCACAGAACGCCATCGAACCCT...............................................................................................................................................................................................................................................................................25180.22404000000000
............TCACAGAACGCCATCGAACCCTAGAGGC.........................................................................................................................................................................................................................................................................28110.09101000000000
.........TCCTCACAGAACGCCATCGAACCCTAGA............................................................................................................................................................................................................................................................................28130.08101000000000
..........CCTCACAGAACGCCATCGAACCCTAGAA...........................................................................................................................................................................................................................................................................28140.07101000000000
............TCACAGAACGCCATCGAACCCTAG.............................................................................................................................................................................................................................................................................24150.07101000000000
............TCACAGAACGCCATCGAACCCTAGA............................................................................................................................................................................................................................................................................25150.07101000000000
.......CTTCCTCACAGAACGCCATCGAACCC................................................................................................................................................................................................................................................................................26190.05100100000000
.........TCCTCACAGAACGCCATCGAACCC................................................................................................................................................................................................................................................................................24190.05101000000000
..........CCTCACAGAACGCCATCGAACCCTA..............................................................................................................................................................................................................................................................................25190.05101000000000
..........CCTCACAGAACGCCATCGAACCCT...............................................................................................................................................................................................................................................................................24190.05101000000000
.........TCCTCACAGAACGCCATCGAACC.................................................................................................................................................................................................................................................................................23190.05101000000000
.........TCCTCACAGAACGCCATCGAAC..................................................................................................................................................................................................................................................................................22200.05101000000000
..........CCTCACAGAACGCCATCGAACC.................................................................................................................................................................................................................................................................................22200.05101000000000
.........................TCGAACCCTAGAGGCCATCGATGATG..............................................................................................................................................................................................................................................................26200.05101000000000
..........CCTCACAGAACGCCATCGAACCCTATT............................................................................................................................................................................................................................................................................27200.05101000000000
............TCACAGAACGCCATCGAACCC................................................................................................................................................................................................................................................................................21200.05101000000000
droEre2
TGGCCACCTTCATTACACAATGACATCGAACTTAAGAATCTATAGTTAATTTACGGCCGTACATGACAAGTCA-------TCCAATGCA----------------------------------------CCAA-ATGCAAT-----------TGGGTCATCTCGAAGAATAGATTCTCAACAGACGAAAA----CCCA---AAACAAATGGTCCATCTTGTGTACCAAAGAAAATAATCCCATTCG-----------------------------------GCCAGCCAGCCTTCATTAAACGGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................TACCAAAGAAAATAATCCCATTCG-----------------------------------GCC.....................2720.5011000000
droSec2
TGAACACCTTCCTCACAGAACGTCATCGAACCCTAGAGGCCATCGATGATTTGAGACCGTCCGTACCAAGTCAGTCGCACTCCAAAGCG----------------------------------------ATAA-ACTCAAG-----------TGGGCCCTCTAGAAAACTAAATTCCTATGAGACGAAAGTGGCTCCAAA-ATCGAAAAGTTGCGACTTGTGCAACAAGGAAAACCATCCTGTCCGTGTATGTCCGCGTTTTCTCCAAATGTCGGTTGACGACCGGTCAGCCTATATTAAACGGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................AGAACGTCATCGAACCCTAGAGGCC........................................................................................................................................................................................................................................................................25202.104236123
................AGAACGTCATCGAACCCTAGAGGC.........................................................................................................................................................................................................................................................................24202.054132054
............................................................................GCACTCCAAAGCG----------------------------------------ATAA-ACTCAAG-----------.........................................................................................................................................................2422.0043010
................AGAACGTCATCGAACCCTAGAGG..........................................................................................................................................................................................................................................................................23201.452924131
................AGAACGTCATCGAACCCTAGAGGCCA.......................................................................................................................................................................................................................................................................26201.252524001
................AGAACGTCATCGAACCCTAGAGGCCAT......................................................................................................................................................................................................................................................................27200.701411111
................................................................................................................................................................................CTATGAGACGAAAGTGGCTCCA...........................................................................................................22200.65138041
................................................................................................................................................................................CTATGAGACGAAAGTGGCTCCAA..........................................................................................................23200.60126060
..................................................TTGAGACCGTCCGTACCAAGTCAGT......................................................................................................................................................................................................................................2520.5010010
............................................................................GCACTCCAAAGCG----------------------------------------ATAA-ACTCAAG-----------T........................................................................................................................................................2520.5011000
..........................................TCGATGATTTGAGACCGTCCGTACCA.............................................................................................................................................................................................................................................2620.5011000
...................................................................AAGTCAGTCGCACTCCAAAGCG----------------------------------------ATA.............................................................................................................................................................................2520.5011000
............................................................................GCACTCCAAAGCG----------------------------------------ATAA-ACTCAA.....................................................................................................................................................................2320.5011000
............................................................................GCACTCCAAAGCG----------------------------------------ATAA-ACTCAAG-----------TGG......................................................................................................................................................2720.5011000
...............................................................................................................................................................................................................................................................GCGTTTTCTCCAAATGTCGGTTGAC.........................25200.4599000
................................................................................................................................................................................CTATGAGACGAAAGTGGCTCC............................................................................................................21200.4594050
...............................................................................................................................................................................................................................................................GCGTTTTCTCCAAATGTCGGTTGACGAC......................28200.3066000
.........................................................................................................................................................................................................ATCGAAAAGTTGCGACTTGTGCAA................................................................................24110.2730030
................AGAACGTCATCGAACCCTAGAGGCCATC.....................................................................................................................................................................................................................................................................28200.2555000
................................................................................................................................................................................CTATGAGACGAAAGTGGCTCCAAA-AT......................................................................................................26200.2555000
.................................................................................................................................................................................TATGAGACGAAAGTGGCTCCAAA-........................................................................................................23200.2555000
.............................................................................................................................................................................................................................GCAACAAGGAAAACCATCCTGTCCG...........................................................25100.2021010
...............................................................................................................................................................................................................................................................GCGTTTTCTCCAAATGTCGGTTG...........................23200.2044000
...................................................................................................................................................................................................................TGCGACTTGTGCAACAAGGAAAACCATC..................................................................28100.2021010
................................................................................................................................................................................................................................................................CGTTTTCTCCAAATGTCGGTTGA..........................23200.2044000
................................................................................................................................................................................CTATGAGACGAAAGTGGCTCCAAA-A.......................................................................................................25200.2044000
...........................................................TCCGTACCAAGTCAGTCGCACTCCA.............................................................................................................................................................................................................................25110.1822000
...............................................................TACCAAGTCAGTCGCACTCCAAAGCG----------------------------------------A...............................................................................................................................................................................27110.1821001
.................................................................................................................................................................................................................................................................GTTTTCTCCAAATGTCGGTTGACGA.......................25200.1533000
................AGAACGTCATCGAACCCTAGAG...........................................................................................................................................................................................................................................................................22200.1533000
................................................................................................................................................................................CTATGAGACGAAAGTGGCTCCAAA-ATC.....................................................................................................2770.1411000
................................................................................................................................................................................CTATGAGACGAAAGTGGCTCCAAA-ATCG....................................................................................................2870.1411000
................................................................................................................................................................................................................................................................CGTTTTCTCCAAATGTCGGTTGAC.........................24200.1021010
....................................................................................................................................................................................................................GCGACTTGTGCAACAAGGAAAACCA....................................................................25100.1011000
...............................................................................................................................................................................................................................................................GCGTTTTCTCCAAATGTCGGTTGT..........................24200.1021001
...................................................................................................................................................................................................................TGCGACTTGTGCAACAAGGAAAACCA....................................................................26100.1011000
...................................................................................................................................................................................................................................AGGAAAACCATCCTGTCCGTGTATGTCC..................................................28100.1011000
................................................................................................................................................................................................................................................................CGTTTTCTCCAAATGTCGGTTGACG........................25200.1022000
.................GAACGTCATCGAACCCTAGAGGCCA.......................................................................................................................................................................................................................................................................25200.1022000
TGAACACCTTCCTCACAGAACGTCATC......................................................................................................................................................................................................................................................................................27200.1020020
...................................................................................................................................................................................................................TGCGACTTGTGCAACAAGGAAAACC.....................................................................25100.1011000
.........................................................................................................................................................................................................................................ACCATCCTGTCCGTGTATGTCC..................................................22200.1022000
................................................................................................................................................................................CTATGAGACGAAAGTGGCTCCAAT-........................................................................................................24200.1022000
...........................................................................................................................................................................................................................GTGCAACAAGGAAAACCATCCTGTCCG...........................................................27100.1010010
...............................................................................................................................................................................................................................................................GCGTTTTCTCCAAATGTCGGT.............................21200.1022000
.................................................................................................................................................................................................................................................................GTTTTCTCCAAATGTCGGTTGACG........................24200.1022000
.......................................................................................................................................................................................................................ACTTGTGCAACAAGGAAAACCATCCTGTC.............................................................29100.1011000
.........................................................................................................................................................................................................ATCGAAAAGTTGCGACTTGTGCAACA..............................................................................26100.1010010
............................................................................................................................................................................................................................TGCAACAAGGAAAACCATCCTGTCCG...........................................................26100.1011000
.........TCCTCACAGAACGTCATCGAACCCTA..............................................................................................................................................................................................................................................................................26200.1021010
.............................................................................................................................................................................................................................GCAACAAGGAAAACCATCCTGTCC............................................................24100.1011000
.........................................................CGTCCGTACCAAGTCAGTCGCACTCC..............................................................................................................................................................................................................................26110.0911000
.......................................................................................................................................CTCAAG-----------TGGGCCCTCTAGAAAACTAAA....................................................................................................................................27110.0911000
.......................................................................................................................................................................................................................................AAACCATCCTGTCCGTGTATGTCC..................................................24110.0911000
..........................................................................................................................................AAG-----------TGGGCCCTCTAGAAAACTAAAAA..................................................................................................................................26110.0911000
...............................................................TACCAAGTCAGTCGCACTCCAAAGC.........................................................................................................................................................................................................................25110.0910010
........................................................CCGTCCGTACCAAGTCAGTCGCACTCCAA............................................................................................................................................................................................................................29110.0911000
...........................................................TCCGTACCAAGTCAGTCGCACTCC..............................................................................................................................................................................................................................24110.0911000
...........................................................TCCGTACCAAGTCAGTCGCACTCCAA............................................................................................................................................................................................................................26110.0911000
.........................................................................................................................................................................................................ATCGAAAAGTTGCGACTTG.....................................................................................19120.0811000
................AGAACGTCATCGAACCCTAGAGGCA........................................................................................................................................................................................................................................................................25200.0511000
.................GAACGTCATCGAACCCTAGAGGCCAT......................................................................................................................................................................................................................................................................26200.0511000
.................GAACGTCATCGAACCCTAGAGG..........................................................................................................................................................................................................................................................................22200.0511000
.................................................................................................................................................................................................................................................................GTTTTCTCCAAATGTCGGTTGACGAC......................26200.0511000
..................................................................................................................................................................................................................................................................TTTTCTCCAAATGTCGGTTGACGAC......................25200.0511000
................................................................................................................................................................................................................................................................CGTTTTCTCCAAATGTCGGTTGACGTA......................27200.0511000
........................................................................................................................................................................................................................................................................CCAAATGTCGGTTGACGACCGG...................22200.0511000
................................................................................................................................................................................CTATGAGACGAAAGTGGCT..............................................................................................................19200.0511000
...............CAGAACGTCATCGAACCCTAGAGGCC........................................................................................................................................................................................................................................................................26200.0511000
................................................................................................................................................................................................................................................................CGTTTTCTCCAAATGTCGGTTGACGA.......................26200.0511000
TGAACACCTTCCTCACAGAACGTCATCGA....................................................................................................................................................................................................................................................................................29200.0511000
................AGAACGTCATCGAACCCTAT.............................................................................................................................................................................................................................................................................20200.0510010
...........................................................................................................................................................................................................................................CATCCTGTCCGTGTATGTC...................................................19200.0510010
..........CCTCACAGAACGTCATCGAACCCTAG.............................................................................................................................................................................................................................................................................26200.0511000
......................................................................................GCG----------------------------------------ATAA-ACTCAAG-----------TGGGCCCTCTAGA............................................................................................................................................27200.0511000
..................................................................................................................................................................................ATGAGACGAAAGTGGCTCCAA..........................................................................................................21200.0510010
...............................................................................................................................................................................................................................................................GCGTTTTCTCCAAATGTCGGTT............................22200.0511000
......................................................GACCGTCCGTACCAAGTCAGT......................................................................................................................................................................................................................................21200.0511000
................................................................................................................................................................................CTATGAGACGAAAGTGGCTC.............................................................................................................20200.0511000
.....................................................................................................................................................................................................................................................................TCTCCAAATGTCGGTTGAT.........................19200.0511000
................................................................................................................................................................................CTATGAGACGAAAGTGGCTCCAC..........................................................................................................23200.0511000
...............................................................................................................................................................................................................................................................GCGTTTTCTCCAAATGTCGGTTGA..........................24200.0510100
.................GAACGTCATCGAACCCTAGAG...........................................................................................................................................................................................................................................................................21200.0511000
.................................................................................................................................................................................TATGAGACGAAAGTGGCTA.............................................................................................................19200.0511000
....................................................................................................................................................................................................................................................................TTCTCCAAATGTCGGTTGACGACCGGT..................27200.0510010
................................................................................................................................................................................................................................................................CGTTTTCTCCAAATGTCGGTTGACGTT......................27200.0511000
.................GAACGTCATCGAACCCTAGAGGCCT.......................................................................................................................................................................................................................................................................25200.0511000
................................................................................................................................................................................CTATGAGACGAAAGTGGCTCCACT-........................................................................................................24200.0510010
................AGAACGTCATCGAACCCTAGAGGCCAC......................................................................................................................................................................................................................................................................27200.0511000
.....................................................................................................................................................................................................................................................................TCTCCAAATGTCGGTTGACGACCGG...................25200.0511000
.................................................................................................................................................................................TATGAGACGAAAGTGGCTCCAA..........................................................................................................22200.0511000
................AGAACGTCATCGAACCCTAGAGGCCT.......................................................................................................................................................................................................................................................................26200.0511000
...............................................................................................................................................................................................................................................................GCGTTTTCTCCAAATGTCGGTTGAAA........................26200.0511000
....................................................................................................................................................................................................................................................................TTCTCCAAATGTCGGTTGACG........................21200.0510010
............TCACAGAACGTCATCGAACCCTAG.............................................................................................................................................................................................................................................................................24200.0510010
.................GAACGTCATCGAACCCTAGAGGCC........................................................................................................................................................................................................................................................................24200.0511000
....................................................................................................................................................................................................................................................................TTCTCCAAATGTCGGTTGACGACCGG...................26200.0511000
........................................................................................G----------------------------------------ATAA-ACTCAAG-----------TGGGCCCTCTAGA............................................................................................................................................25200.0511000
...............................................................................................................................................................................................................................................................GCGTTTTCTCCAAATGTCGGTTGAA.........................25200.0511000
......................................................GACCGTCCGTACCAAGTCAGTC.....................................................................................................................................................................................................................................22200.0511000
.......................................................................................................................................................................................................................................................................TCCAAATGTCGGTTGACGACCGG...................23200.0510100
...............................................................................................................................................................................................................................................................GCGTTTTCTCCAAATGTCGGTTGATCT.......................27200.0511000
.......................................................................................................................................................................................................................................................................TCCAAATGTCGGTTGACGACCGGTC.................25200.0510001
.................................................................................................................................................................................................................................................................GTTTTCTCCAAATGTCGGTTGACGT.......................25200.0511000
.................GAACGTCATCGAACCCTAGAGGC.........................................................................................................................................................................................................................................................................23200.0511000
droSim2
TGAACACCTTCCTCACAGAACGTCATCGAACCCTAGAGGCAATCGATGATGTGAGACCGTCCGTACCAAGTAAGTCGCACTCCAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTAGAAAAC--TATTCCTATGAGACGAAAGTGGCTCCAAA-ATCGAAAAGTTGCGACTTGTGCAACAAGGAAAACCATCCTGTCCGTGTATGTCCGCGTTTTCTCCAAATGTCGGTTGACGACCGATCAGCCTACATTAAACGGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
TGAACACCTTCCTCACAGAACGTCAT.......................................................................................................................................................................................................................................................................................268172.50138000020008593117183670011993000
TGAACACCTTCCTCACAGAACGTCATC......................................................................................................................................................................................................................................................................................27849.63397011013600273914627515540000
..................................................................................................................................TGA-ACTCAAG-----------TGGGCCCTCTAGAAAAC--......................................................................................................................................27147.00470000001851750020000
TGAACACCTTCCTCACAGAACGTCA........................................................................................................................................................................................................................................................................................25839.7531800120310141211117109354000
TGAACACCTTCCTCACAGAACGTC.........................................................................................................................................................................................................................................................................................24838.75310000518607139377082000
TGAACACCTTCCTCACAGAACGTCATCG.....................................................................................................................................................................................................................................................................................28733.7123600012032901110000000
TGAACACCTTCCTCACAGAAC............................................................................................................................................................................................................................................................................................211032.2032200202793111323000000
...........................GAACCCTAGAGGCAATCGATGATGTGA...........................................................................................................................................................................................................................................................27131.00310000001712200000000
.........................................................................................................................................................................................GAAAGTGGCTCCAAA-ATCGAAAAGT..............................................................................................25329.00870000000469320000000
TGAACACCTTCCTCACAGAACG...........................................................................................................................................................................................................................................................................................22925.782320010217031600013000
.............................................................................................................................................................................................GTGGCTCCAAA-ATCGAAAAGTTGCGA.........................................................................................26322.336700010037016112000000
....................................................................................................................................A-ACTCAAG-----------TGGGCCCTCTAGAAAA.........................................................................................................................................24622.001320001200121821405330000
....................................................................................................................................A-ACTCAAG-----------TGGGCCCTCTAGAAA..........................................................................................................................................23615.8395000800100701304017000
....................................................................................................................................A-ACTCAAG-----------TGGGCCCTCTAGAAAAC--......................................................................................................................................25115.001500003060100050000
....................................................................................................................................A-ACTCAAG-----------TGGGCCCTCTAGAA...........................................................................................................................................22713.149200020036023130198000
................................................................................TCCAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCC...................................................................................................................................................26112.001200000000000057000
................................................................................TCCAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCC..................................................................................................................................................27110.001000020000000080000
..................................................................................................................................TGA-ACTCAAG-----------TGGGCCCTCTAGAAAA.........................................................................................................................................26110.001000000041410000000
................................................................................TCCAAAGCG----------------------------------------ATGA-ACTC.......................................................................................................................................................................1719.00900000043110000000
....................................................................................................................................A-ACTCAAG-----------TGGGCCCTCTAGAAAAC--T.....................................................................................................................................2619.00900000050300010000
.........................................................................................................................................................................................GAAAGTGGCTCCAAA-ATCGAAAAGTT.............................................................................................2638.6726000000219050000000
.........TCCTCACAGAACGTCATCGAACCCTAGA............................................................................................................................................................................................................................................................................2868.67520000003015430000000
.........................................................................................................................................................................................GAAAGTGGCTCCAAA-ATCGAAAAGTTGC...........................................................................................2838.0024000000020130000000
............................................................................................................................................................................................................................TGCAACAAGGAAAACCATCCTGTCCGTGTA.......................................................3017.00700000033100000000
.........................................................................................................................................................................................GAAAGTGGCTCCAAA-ATCGAAAAG...............................................................................................2437.0021000000013170000000
.............................................................................................................................................................................................GTGGCTCCAAA-ATCGAAAAGTTGCGAC........................................................................................2736.3319003100203010000000
....................................................................................................................................................................................................................................................CGTGTATGTCCGCGTTTTCTCCAA.....................................2466.3338000024070601000000
........TTCCTCACAGAACGTCATCGAACCCTAGA............................................................................................................................................................................................................................................................................2966.00360000001516320000000
........................................................................................................................................................................................................................................................................................GACCGATCAGCCTACATTAAACGGA2516.00600000051000000000
...............................................................................................................................................................................................GGCTCCAAA-ATCGAAAAGTT.............................................................................................2036.0018000061200000000000
.....................................................................................................................................................................................................................................................GTGTATGTCCGCGTTTTCTCCAAA....................................2475.2937000000273025000000
...........CTCACAGAACGTCATCGAACCCTAGA............................................................................................................................................................................................................................................................................2665.1731011000219350000000
.................................................TGTGAGACCGTCCGTACCAAGTAAGT......................................................................................................................................................................................................................................2615.00500100001001020000
..........CCTCACAGAACGTCATCGAACCCTAGA............................................................................................................................................................................................................................................................................2765.00300000001311330000000
TGAACACCTTCCTCACAGAACGT..........................................................................................................................................................................................................................................................................................2385.0040001000807222000000
....................................................................................................................................A-ACTCAAG-----------TGGGCCCTCT...............................................................................................................................................1875.0035000034000001000000
....................................................................................................................................................................................................................................................................................TGACGACCGATCAGCCTACATTAAACGGA2915.00500000050000000000
.....................................................................................AGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTAGA............................................................................................................................................2815.00500000023000000000
.....ACCTTCCTCACAGAACGTCATCGAAC..................................................................................................................................................................................................................................................................................2665.0030000002900001000000
........TTCCTCACAGAACGTCAT.......................................................................................................................................................................................................................................................................................1884.7538000000000038000000
.....................................................................................................................................................................................................................................................GTGTATGTCCGCGTTTTCTCCAA.....................................2374.7133000013025229000000
.............................................................................................................................................................................................GTGGCTCCAAA-ATCGAAAAGTTGC...........................................................................................2434.671400000031208000000
..............................................................................................................................................................................................................................................................................................TCAGCCTACATTAAACGGA1994.5641000003713000000000
....................................................................................................................................A-ACTCAAG-----------TGGGCCCTCTAGAAAAA--......................................................................................................................................2564.5027000000200000169000
TGAACACCTTCCTCACAGAA.............................................................................................................................................................................................................................................................................................20104.1041006033000200000000
.............................ACCCTAGAGGCAATCGATGATGTGAGA.........................................................................................................................................................................................................................................................2714.00400000030100000000
.................................................TGTGAGACCGTCCGTACCAAG...........................................................................................................................................................................................................................................2124.00800008000000000000
.....................................................................................AGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCT...............................................................................................................................................2514.00400000030010000000
..............................................................................................................................................................................................................................CAACAAGGAAAACCATCCTGTCCG...........................................................2414.00400000400000000000
........................................................................................G----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTAGA............................................................................................................................................2514.00400000020200000000
.................................TAGAGGCAATCGATGATGTGAGACCG......................................................................................................................................................................................................................................................2614.00400000000004000000
.....................................................................................AGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTA..............................................................................................................................................2614.00400000020200000000
..............................................................................................................................................................................................................................CAACAAGGAAAACCATCCTGTCC............................................................2314.00400000400000000000
.................................................TGTGAGACCGTCCGTACCA.............................................................................................................................................................................................................................................1924.00800008000000000000
...........................................................................................................................................................................TATTCCTATGAGACGAAAGTGGC...............................................................................................................2314.00400000020100010000
.................................................TGTGAGACCGTCCGTACCAAGTAAGTC.....................................................................................................................................................................................................................................2714.00401300000000000000
TGAACACCTTCCTCACAGAACGTCATCGAA...................................................................................................................................................................................................................................................................................3073.7126000000913400000000
.............................................................................................................................................................................TTCCTATGAGACGAAAGTGGCTCCAA..........................................................................................................2623.50700000011011030000
.....................................................................................................................................................................................................................................................................TCTCCAAATGTCGGTTGAC.........................19103.5035000003500000000000
....................................................................................................................................................................................................................................................CGTGTATGTCCGCGTTTTCTCCAAA....................................2563.5021000112040013000000
TGAACACCTTCCTCACAG...............................................................................................................................................................................................................................................................................................18103.4034000033010000000000
TGAACACCTTCCTCACAGA..............................................................................................................................................................................................................................................................................................19103.4034001033000000000000
..............................................................................................................................................................................................................................CAACAAGGAAAACCATCCTG...............................................................2033.331000005500000000000
.........................................................................................................................................................................................................................................ACCATCCTGTCCGTGTATGTCCGCGTT.............................................2753.201600000054601000000
........................................................................................G----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTAGAAAAC--......................................................................................................................................2913.00300000010200000000
.....................................................................................................................................................................................................................................................................................GACGACCGATCAGCCTACATTAAACGGA2813.00300000011100000000
.................................TAGAGGCAATCGATGATGTGAGACCGT.....................................................................................................................................................................................................................................................2713.00300000000001020000
.................................................................................................................................ATGA-ACTCAAG-----------TGGGCCCTC................................................................................................................................................2013.00300003000000000000
..................................................................................................................................TGA-ACTCAAG-----------TGGGCCCTCTAGAAAAC--T.....................................................................................................................................2813.00300000021000000000
...................................................................................................................................................................................................................TGCGACTTGTGCAACAAGGAAAACCA....................................................................2633.00900000020610000000
.....................................................................................AGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTAGAA...........................................................................................................................................2913.00300000011100000000
...........................................................TCCGTACCAAGTAAGTCGCACTCCA.............................................................................................................................................................................................................................2513.00300000030000000000
TGAACACCTTCCTCACAGAACGTCATCGA....................................................................................................................................................................................................................................................................................2972.862000050016431000000
........TTCCTCACAGAACGTCATCGAACCC................................................................................................................................................................................................................................................................................2562.8317000000222100100000
..........................................................................................................................................................................................................TCGAAAAGTTGCGACTTGTGCAACA..............................................................................2542.751100000022232000000
.........TCCTCACAGAACGTCATCGAACCCTA..............................................................................................................................................................................................................................................................................2662.331400000035100050000
.........................................................................................................................................................................................GAAAGTGGCTCCAAA-ATCGAAAAGTTGCGA.........................................................................................3032.33700000016000000000
....................................................................................................................................................................................................................................................CGTGTATGTCCGCGTTTTCTCCAAAT...................................2662.1713000112000000000000
............TCACAGAACGTCATCGAACCCTAGA............................................................................................................................................................................................................................................................................2562.171300000055000030000
.....................................................................................................................................................................................................................................................GTGTATGTCCGCGTTTTC..........................................1872.1415000014000001000000
.....................................................................................................................................................................................................................................................GTGTATGTCCGCGTTTTCTCCAAAT...................................2572.1415000013000002000000
....................................................................................AAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTC................................................................................................................................................2512.00200000011000000000
.......................................................................................................................................................................................................................................AAACCATCCTGTCCGTGTATGTCCGCGTT.............................................2912.00200000011000000000
............................................................................................................................................................................................................................TGCAACAAGGAAAACCATCCTGTCCG...........................................................2612.00200000000002000000
....................................................................................................................................................................................................................................................................TTCTCCAAATGTCGGTTGACGACCGA...................2612.00200000000011000000
..........................................................................................................................................................................................................................................................TGTCCGCGTTTTCTCCAA.....................................1882.0016000016000000000000
.............................................................................................................................................................................................................................................................CCGCGTTTTCTCCAAATGTCG...............................2182.0016000001600000000000
...............................................................................................................................................................................................GGCTCCAAA-ATCGAAAAG...............................................................................................1832.00600006000000000000
....................................................................................................................................A-ACTCAAG-----------TGGGCCCTCTAGAAAAC--A.....................................................................................................................................2612.00200000000000002000
...................................................................................................................................................................................................................................................................TTTCTCCAAATGTCGGTTGACGACCGA...................2712.00200000010001000000
................................................................................TCCAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGC....................................................................................................................................................2512.00200000001100000000
.............................................................................................................................................................................TTCCTATGAGACGAAAGTGGCTCCA...........................................................................................................2522.00400000000022000000
................................CTAGAGGCAATCGATGATGTGAGAC........................................................................................................................................................................................................................................................2512.00200000000002000000
..............................................................................................................................................................................................................................CAACAAGGAAAACCATCCTGTCCGT..........................................................2512.00200000200000000000
.................................TAGAGGCAATCGATGATGTGAGA.........................................................................................................................................................................................................................................................2312.00200000010100000000
.....................................................................................................................................................................................................................................................GTGTATGTCCGCGTTTTCTCCAAATG..................................2672.0014000000020012000000
....................................................................................................................................A-ACTCAAG-----------TGGGCCCTCTAGAAAAC--TA....................................................................................................................................2712.00200000000100001000
............................AACCCTAGAGGCAATCGATGATGTGA...........................................................................................................................................................................................................................................................2612.00200000001001000000
........TTCCTCACAGAACGTCATCGAACCCTA..............................................................................................................................................................................................................................................................................2762.001200000001512030000
....................................................................................................................................................................................................................................................................................TGACGACCGATCAGCCTACATTAAA....2512.00200000020000000000
..................................................................................................................................TGA-ACTCAAG-----------TGGGCCCTCTAGAAAAC--TA....................................................................................................................................2912.00200000011000000000
....................................................................................................................................A-ACTCAAG-----------TGGGCCCTCTAGAAAAC--TAT...................................................................................................................................2812.00200010010000000000
..................................................................................................................................TGA-ACTCAAG-----------TGGGCCCTCTAGAAA..........................................................................................................................................2512.00200000001010000000
...................................................................................................................................................................................................................TGCGACTTGTGCAACAAGGAAAACCATC..................................................................2832.00600000000150000000
...........................................................TCCGTACCAAGTAAGTCGCACTCCAA............................................................................................................................................................................................................................2612.00200000001000010000
........................................................................................G----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTAGAA...........................................................................................................................................2612.00200000002000000000
......................................................................................GCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTAGA............................................................................................................................................2712.00200000020000000000
..................................................................................CAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCC..................................................................................................................................................2512.00200000000000020000
...................................................................................AAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCT...............................................................................................................................................2712.00200000020000000000
.................................................TGTGAGACCGTCCGTACCAAGTAA........................................................................................................................................................................................................................................2412.00200100000000010000
................................................................................TCCAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCT.................................................................................................................................................2812.00200000000000011000
....................................................................................................................................................................................................................................................CGTGTATGTCCGCGTTTTCTCCA......................................2361.831100000070400000000
.....ACCTTCCTCACAGAACGTCAT.......................................................................................................................................................................................................................................................................................2181.7514000000000014000000
....................................................................................................................................A-ACTCAAG-----------TGGGCCCTCTAGA............................................................................................................................................2171.711200000040003032000
.........TCCTCACAGAACGTCATCGAACCCTAGAA...........................................................................................................................................................................................................................................................................2961.671000000028000000000
..............................................................................................................................................................................................................................CAACAAGGAAAACCATCCT................................................................1931.67500005000000000000
.............................................................................................................................................................................................GTGGCTCCAAA-ATCGAAAAGTTGCG..........................................................................................2531.67500010020101000000
.................................................TGTGAGACCGTCCGTACC..............................................................................................................................................................................................................................................1861.50900200000007000000
.......CTTCCTCACAGAACGTCAT.......................................................................................................................................................................................................................................................................................1981.5012000000000012000000
..............................................................................................................................................................................TCCTATGAGACGAAAGTGGCTCCAAA-........................................................................................................2621.50300000011000010000
......CCTTCCTCACAGAACGTCAT.......................................................................................................................................................................................................................................................................................2081.3811000000000011000000
.........TCCTCACAGAACGTCATCGAACCC................................................................................................................................................................................................................................................................................2461.33800010000000070000
..........CCTCACAGAACGTCATCGAACCCTAGAA...........................................................................................................................................................................................................................................................................2861.33800100032020000000
........TTCCTCACAGAACGTCATCGAACCCTAGAA...........................................................................................................................................................................................................................................................................3061.33800000044000000000
.............................................................................................................................................................................................GTGGCTCCAAA-ATCGAAAAGTTGCGACT.......................................................................................2831.33400010010200000000
.....................................................................................................................................................................................................................................................GTGTATGTCCGCGTTTTCTCCAAATGT.................................2771.29900000000009000000
.........................................................................................................................................................................................................ATCGAAAAGTTGCGACTTGTGCAACA..............................................................................2641.25500000020102000000
TGAACACCTTCCTCACAGAACGTCAA.......................................................................................................................................................................................................................................................................................2681.251000000000112042000
..........CCTCACAGAACGTCATCGAACCCTA..............................................................................................................................................................................................................................................................................2561.17700000040001011000
....................................................................................................................................A-ACTCAAG-----------TGGGCCCTCTAGAAAAA--A.....................................................................................................................................2661.17700000000000034000
TGAACACCTTCCTCACAGAACGTCATT......................................................................................................................................................................................................................................................................................2781.13900000020150001000
..............................................................................................................................................................................TCCTATGAGACGAAAGTGGCTCCAAA-A.......................................................................................................2721.00200000010010000000
.............................................................................................................................................................................TTCCTATGAGACGAAAGTGGCTCCAAA-A.......................................................................................................2821.00200000001010000000
...................................................TGAGACCGTCCGTACCAAGTAAGTCG....................................................................................................................................................................................................................................2611.00100000000000010000
...................................................TGAGACCGTCCGTACCAA............................................................................................................................................................................................................................................1821.00200200000000000000
.......................................................................................................................................................................AC--TATTCCTATGAGACGAAAGTG.................................................................................................................2311.00100000000001000000
.....................................................................................................................................................................................................................................................................TCTCCAAATGTCGGTTGACGACCGATC.................2711.00100001000000000000
...............................................................................................................................................................................................................................AACAAGGAAAACCATCCTGTCCGTGTA.......................................................2711.00100000000010000000
........................................................................................................................................TCAAG-----------TGGGCCCTCTAGAAAAC--TAT...................................................................................................................................2511.00100000001000000000
...........................GAACCCTAGAGGCAATCGATGATGT.............................................................................................................................................................................................................................................................2511.00100000000001000000
..................................................................................................................................TGA-ACTCAAG-----------TGGGCCCTCTAGAAAAA--......................................................................................................................................2711.00100000010000000000
...........................................................................................................................................................................TATTCCTATGAGACGAAAGTGGA...............................................................................................................2311.00100000000001000000
............TCACAGAACGTCATCGAACCCTAGAGGCAA.......................................................................................................................................................................................................................................................................3011.00100000000100000000
..............................................................................ACTCCAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGG......................................................................................................................................................2511.00100000010000000000
.................................................................................................................................ATGA-ACTCAAG-----------TGGGCCCTCTAGAAAAC--C.....................................................................................................................................2911.00100000010000000000
...........................GAACCCTAGAGGCAATCGATGATGTGAGA.........................................................................................................................................................................................................................................................2911.00100000000010000000
...........................................................TCCGTACCAAGTAAGTCGCA..................................................................................................................................................................................................................................2011.00100000000001000000
...............................CCTAGAGGCAATCGATGATGTGAG..........................................................................................................................................................................................................................................................2411.00100000000001000000
....................................................................................AAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCC..................................................................................................................................................2311.00100000010000000000
...............................CCTAGAGGCAATCGATGATGTGAGACC.......................................................................................................................................................................................................................................................2711.00100000000001000000
........................................AATCGATGATGTGAGACCGTCCGTAC...............................................................................................................................................................................................................................................2621.00200000000001010000
...............................................................................................................................................................................CCTATGAGACGAAAGTGGC...............................................................................................................1941.00400000000004000000
.............................................................................................................................................................................................................................................................................TGTCGGTTGACGACCGATCAGC..............2211.00100000000100000000
..............................CCCTAGAGGCAATCGATGATGTGA...........................................................................................................................................................................................................................................................2411.00100000010000000000
................................................................................TCCAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTC................................................................................................................................................2911.00100000000100000000
...........................................................TCCGTACCAAGTAAGTCGCACTCCAAAAA.........................................................................................................................................................................................................................2911.00100000000000010000
..............................................TGATGTGAGACCGTCCGTACCAAGTAA........................................................................................................................................................................................................................................2711.00100000000001000000
..................................................................................................................................TGA-ACTCAAG-----------TGGGCCCTCTAGAAAAC--TAT...................................................................................................................................3011.00100000010000000000
.......................................................................................................................................................................................................................................................................................CGACCGATCAGCCTACATTAAACGGA2611.00100000010000000000
.................................TAGAGGCAATCGATGATGTG............................................................................................................................................................................................................................................................2011.00100000000001000000
........................................................................................G----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTAG.............................................................................................................................................2411.00100000010000000000
........TTCCTCACAGAACGTCATC......................................................................................................................................................................................................................................................................................1981.00800010000007000000
....................................................................................................................................................................................................CAAA-ATCGAAAAGTTGCGACTTGTGC..................................................................................2641.00400000030001000000
..................................................................................................................................TGA-ACTCAAG-----------TGGGCCCTCTA..............................................................................................................................................2111.00100000000100000000
.........................................................................................................................................................................................................................TTGTGCAACAAGGAAAACCATCCTGTC.............................................................2731.00300000000003000000
...................................................................................................................................GA-ACTCAAG-----------TGGGCCCTCTAGAAAAC--......................................................................................................................................2611.00100000000100000000
........................................................................................................................................TCAAG-----------TGGGCCCTCTAGAA...........................................................................................................................................1981.00800000071000000000
...................................................................................AAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCC..................................................................................................................................................2411.00100000000001000000
...............................CCTAGAGGCAATCGATGATGTGAGA.........................................................................................................................................................................................................................................................2511.00100000000001000000
...................................................................................AAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCC.................................................................................................................................................2511.00100000010000000000
........................................................................................................................................................................................................................................AACCATCCTGTCCGTGTATGTCCGCGTT.............................................2851.00500000002110010000
...........................................................................CGCACTCCAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGG......................................................................................................................................................2811.00100000000100000000
...................................................................................AAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTC................................................................................................................................................2611.00100000010000000000
.............CACAGAACGTCATCGAACCCTAGAGGCAA.......................................................................................................................................................................................................................................................................2911.00100000000000010000
.................................................TGTGAGACCGTCCGTACCAAGTAAGTT.....................................................................................................................................................................................................................................2711.00100000000000010000
......................................................GACCGTCCGTACCAAGTAAGTCGC...................................................................................................................................................................................................................................2411.00100000000001000000
................................................................................................................................................................................................................................ACAAGGAAAACCATCCTGTCCGTGTA.......................................................2611.00100010000000000000
..............................................TGATGTGAGACCGTCCGTACCAAGTA.........................................................................................................................................................................................................................................2611.00100000000010000000
..................................................................................CAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCT.................................................................................................................................................2611.00100000010000000000
.................................................................................................................................................................................TATGAGACGAAAGTGGCTCCAAA-AT......................................................................................................2521.00200000000000002000
...............................................................................CTCCAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGC....................................................................................................................................................2611.00100000000000010000
.........................................................................................................................................................................................GAAAGTGGCTCCAAA-ATCGAAAAGTTGCG..........................................................................................2931.00300000003000000000
.............................................................CGTACCAAGTAAGTCGCACTCCAAAGCG----------------------------------------A...............................................................................................................................................................................2911.00100010000000000000
............................AACCCTAGAGGCAATCGATGATGTGAGA.........................................................................................................................................................................................................................................................2811.00100000000100000000
...................................................................................................................................................................................................................TGCGACTTGTGCAACA..............................................................................1671.00700000002014000000
.....................................................................................AGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTAG.............................................................................................................................................2711.00100000000100000000
.................................TAGAGGCAATCGATGA................................................................................................................................................................................................................................................................1611.00100000000001000000
.................................................TGTGAGACCGTCCGTACCAAGTAAGTA.....................................................................................................................................................................................................................................2711.00100000000000010000
.................................TAGAGGCAATCGATGATGTGAGAC........................................................................................................................................................................................................................................................2411.00100000000001000000
........................................................................................................................................TCAAG-----------TGGGCCCTCTAGAAAAC--TATTCC................................................................................................................................2811.00100000001000000000
.....................................................................................AGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCC..................................................................................................................................................2211.00100000000100000000
..........................CGAACCCTAGAGGCAATCG....................................................................................................................................................................................................................................................................1911.00100000000001000000
.................................................TGTGAGACCGTCCGTACCAAGTAAG.......................................................................................................................................................................................................................................2511.00100000000000010000
..................................................................................CAAAGCG----------------------------------------ATGA-ACTC.......................................................................................................................................................................1511.00100000010000000000
........................................................CCGTCCGTACCAAGTAAGTCGC...................................................................................................................................................................................................................................2211.00100000000001000000
.......................................................................................CG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTAGAA...........................................................................................................................................2711.00100000010000000000
.............................................................................................................................................................................TTCCTATGAGACGAAAGTGGCTCCAAA-........................................................................................................2721.00200000000020000000
.................................................................................................................................ATGA-ACTCAAG-----------TGGGCCCTCTAGA............................................................................................................................................2411.00100000000100000000
.................................TAGAGGCAATCGATGATGTGA...........................................................................................................................................................................................................................................................2111.00100000000001000000
...........................................................TCCGTACCAAGTAAGTCGCACT................................................................................................................................................................................................................................2211.00100000000001000000
........................................................................................................................................TCAAG-----------TGGGCCCTCTAGAAAAC--T.....................................................................................................................................2321.00200000001100000000
.........................................................................................................................................................................................GAAAGTGGCTCCAAA-ATCGAAAAGTTG............................................................................................2731.00300000001020000000
...........................................CGATGATGTGAGACCG......................................................................................................................................................................................................................................................1681.00800000030005000000
..................................................................................CAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTC................................................................................................................................................2711.00100000000010000000
...............................CCTAGAGGCAATCGATGATGTGAGAC........................................................................................................................................................................................................................................................2611.00100000000001000000
...........................................................................................................................................................................TATTCCTATGAGACGAAAGTGGCTCCAAA-A.......................................................................................................3011.00100000000100000000
..............................CCCTAGAGGCAATCGATGATGTGAGA.........................................................................................................................................................................................................................................................2611.00100000000100000000
............................................GATGATGTGAGACCGTC....................................................................................................................................................................................................................................................1771.00700000000007000000
..........................................................................................................................................................................................................................................................TGTCCGCGTTTTCTCCAAATGTCGGT.............................2680.88700000002041000000
........TTCCTCACAGAACGTCA........................................................................................................................................................................................................................................................................................1780.88700000000007000000
.....................................................................................................................................................................................................................................................GTGTATGTCCGCGTTTTCTCCAAATGTC................................2870.86600000003012000000
....CACCTTCCTCACAGAACGTCATCGAA...................................................................................................................................................................................................................................................................................2670.86600000011211000000
..................................................................................................................................................................................................................................................TCCGTGTATGTCCGCGTTTTCTCCAAA....................................2760.83500000000050000000
...ACACCTTCCTCACAGAACGTCAT.......................................................................................................................................................................................................................................................................................2380.75600000000006000000
..........................................................................................................................................................................................................................................................TGTCCGCGTTTTCTCCAAATGTCGG..............................2580.75600000001041000000
dm3
TGAACACCTTCCTCACAGAACGTCATCGAACCCTAGAGGCCATCGATGATGTGAGACCGTCCGTACCAAGTCAGTCGCACTCCAAAGCG----------------------------------------ATGA-ACTCAAG-----------TGGGCCCTCTAGAAAATTAAATTCCTATGAGACGAAAGTGGCTCCAAA-ATCGAAAAGTTGCGACTTGTGCAACAAGGAAAACCATCCTGTCCGTGTATGTCCGCGTTTTCTCCAAATGTCGGTTGACGACCGGTCAGCCTACATTAAACGGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................TAAATTCCTATGAGACGAAAGTGGC...............................................................................................................2520101.65203300000001000000000000001400000000000021075140417009005000000000000000000000000000002000200000000000000000000000000002000000000000000200030001760153201018503107551261200000000000000000000000000370000023600080930000002203170131203000062003861131043110100000000100000000100000000000000000000000000000000000000000020200030336005100022811640900000000000000102259100000
...............CAGAACGTCATCGAACCCTAGAGGC.........................................................................................................................................................................................................................................................................252056.401128003000000000000000000040000001000000300000000180000250000000000000000000000000000000000000000000001000000000000000000000000000000000000000000009020132529200294410000000000000000000000000000000001100200103000000000100008000010441828230100010000000000000000000000000000000000000000000000000000000000000000561305000000139319200000000000000441291060000000
...............................................................................................................................................................................................GGCTCCAAA-ATCGAAAAGTTGCGAC........................................................................................252050.95101900000000000000000000077000000000000018120030073170423202100000000000000000000000000000000000000000000000000000000000000000000000000000008050400910002173029000032000000000000000000000010005000000015000501001800000920000120000135336291205801014032000000001001000000000000000000000000000000000001000000000000001021065925000000710190000000000000128035450000011
....................................................................................................................................................................................................................................................................TTCTCCAAATGTCGGTTGACGACCGG...................262044.30886000000000000000000000000000000000000002700010180432151210030000000000000000000000000000000000000000000010000000000000000000000000000000005000010000044051000000321234000000000000000000000000000000000000459200040148000005654090083000000800345270170000000000000000000000000000000000000000000000000000000000000003000281000000001000000000000000131900000000
...........................................................TCCGTACCAAGTCAGTCGCACTCC..............................................................................................................................................................................................................................242043.6587300800000000000000000023400000000000041170000000001640330000000000000000000000000000000010000000001000000000001000000000000000000000104000400006500082001504180100000000000000000000000000000000002190000002000000000200000080013566189111724063000000000110200000000000000000000000000000000000100000000000000000616060000000141600000000000000067015000000
...............................................................................................................................................................................................GGCTCCAAA-ATCGAAAAGTTGCGA.........................................................................................242036.85737000000000000000000000670000000000000203001101400400030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040102000600000000000000000000000010200000010130002225011000002200040000004301100012704743370000000000101000000000000000000000000000000000000000000000002001000900000000270180000000000000013151312000000
.....................................................................................................................................................................................................................................................................TCTCCAAATGTCGGTTGACGACCGG...................252023.7547500000000000000000000040000000000000025100040000260000016100000000000000000000000000000000100000000000000000000000000000000000000000000100000104000000172401800000000000000000000000000000000000000005600410000000000520000000000000310040002000000003000000000000000000000000000000000000000010000000000000000002900000002823000000000000001523519000000
...............................................................................................................................................................................................GGCTCCAAA-ATCGAAAAGTTGCGACT.......................................................................................262015.5031000000000000000000000001000000000000010000000000005200000000000000000000000000000000000000000000010000000000000000000000000000000000010000000000000003000000000000000000000000000000000000000001000075010000034000000000170011101290010700000000000000000000000000000000000000000000000000000000000000000036010000005103000000000000002520000000
...........................................................TCCGTACCAAGTCAGTCGCACTCCA.............................................................................................................................................................................................................................252015.50310005000000000000000000330000001000000001010110100130010000000000000000000000000000010000000000000000000000000000000000000000000000000200000000000000210002000000000000000000000000000000000000090401410000000237000004000181303602609005200000000000000000000000000000000000000000000000000000000000000000072300000013060000000000000000105000000
...............CAGAACGTCATCGAACCCTAGAGG..........................................................................................................................................................................................................................................................................242015.3030600000000000000000000000300000000000010001100050000301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024000710186057000000000000000000000000000000200005210000043000000031001000000197720000001000000000000000000000000000000000000000000000000000000000000000000002000000000103800000000000000003526000000
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..........................................................................................................................................................................................................................TGTGCAACAAGGAAAACCATCCTGTCC............................................................27200.65130000000000000000000000000000000000000000100000001000110000000000000000000000000000000020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000200020000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.............CACAGAACGTCATCGAACCCTAGAGGCC........................................................................................................................................................................................................................................................................28200.65130000000000000000000000000000000000000200100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000200000000000000000000000000000000000000000001000000000000000000201001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................AAATTCCTATGAGACGAAAGTGG................................................................................................................23200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000003000030000000000000000000000000000000000000000000000000000000000000000000000000000000400000000100000000000000000
..........................................................................................................................................................................................................................................................................AAATGTCGGTTGACGACCGGTCAGC..............25200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000006000002000001000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
...........................................................TCCGTACCAAGTCAGTCGCACTCCAT............................................................................................................................................................................................................................26200.65130000000000000000000000000000000000000100000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013011014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TGGCTCCAAA-ATCGAAAAGTTGC...........................................................................................23200.65130000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000001000000000000000000100000110001000000001000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000
............TCACAGAACGTCATCGAACCC................................................................................................................................................................................................................................................................................21200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100040000000000000000310000000000000000000000000000100000
............................................................................................................................................................................................AGTGGCTCCAAA-ATCGAAAAG...............................................................................................21200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000010000000000000000000000000000000000000100000200010000000000000000002000000000001001020000000000000000
................................................................................................................................................................................................................................................TGTCCGTGTATGTCCGCGTTTTCTCC.......................................26200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002310401000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000
.......................................................................................................................................CTCAAG-----------TGGGCCCTCTAGAAAATTA......................................................................................................................................25200.651300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
TAGATAACTTCCTGACAGAGCGCCATCGCACTCTGGAGGCCATCGACGACGTTAGGCCTAGTGGCTCCGGGCAATCTCCGCTAAGGTCG----------------------------------------GGAC-TTCCTGC-----------TGCCCCTGCACGGAGGCTCAATTCGTACGAGACTCGAGTGGCTCCGGG-CCAAAAGGGATGCGATCTCTGTTCGAGGGAGAACCACCCTATCCGCTTATGTCCGCGTTTCCTAGAAATGAACGTGGACGGGCGATCCGACTACATTAAAAGGASizeHit CountTotal NormTotal
No Reads
droBia1
TGAACGCATTTCTTACGGAGCGTCATTGGACCATAGAAGCCATCGACGATGTACTGCCGTCAGGTTCAAGCCAATCCCTGCCTAAGACA----------------------------------------TCCGTCCCCCAC-----------CGCAGCTCCTCGAAAAATAAATTCTAACGAGACAAGGGAAGCTCCCAA-GCCCAAAGGATGTGACCTTTGTAGGAAGGAAAACCATCCGGTCCGCACATGTTCACGATTTCTCTAGATAACGGTCGACGAACGGTTGGCATATACAAAAAGAASizeHit CountTotal NormTotal
No Reads
droTak1
TGAACACCTTTCTCACTGAGCGCCATCGAACCCTCGAGGCCATAGATGACGTGCGACCTTCTGGGTCAAGTCATTCGCAGTCCAAAGCA----------------------------------------ACGA-ACGCTAG-----------CGGGTCTTTAAGCAGAATAAATTCTTATGAGACTAAGATAGTTCCGAAGACCGAGACGTTGCGATCTGTGCTCAAGGGAAAGCCACCCTATACGCACTTGTCCACGTTTCCTCCAAATGACAGTAGACGAGCGGGCCGCCTATATCCGAAACASizeHit CountTotal NormTotal
No Reads
droEle1
TGAACACCTTTCTCACTGAGCGCCATCGAACCCTCGAGGCCATAGATGACGTGCGACCTTCTCTGTCAAGTCATTCGCAGTCCAAAGCA----------------------------------------ACGA-ACGCTAG-----------CGGGTCTTTAAGCAAAATAAATTCTTATGAGACTAAGATAGTTCCGAA-ACCGAGACATTGCGATCTGTGCTCAAGGGAAAGCCACCCTATACGCACTTGTCCACGTTTCCTCCAAATGACAGTAGACGAGCGGGCCGCCTATATCCGAAACASizeHit CountTotal NormTotal
No Reads
droRho1
TGAATGGGTTCCTAACTGAGCGTCACCGAACACTAGAAGCCATAGATGATGTGA-ACCATCAGGCTCTAGTCAGTCTCAGCCCAGAGCA----------------------------------------TCGA-TATCCAA-----------TTCTGTGTTTCGGAGGATAAATTCCTACGAGGCAAGGGTAGCACCCAG-ACCTATAGGGTGTGATTTGTGTAATCGGGAAAACCATCCCGTACGCACATGCCC-CGGTTTCTCCGGATGTCTGTCGATGT-----CCGATTACATAAAAAAGASizeHit CountTotal NormTotal
No Reads
droFic1
TAAATAATTTCCTCACTGAGCGTCACAGGACACTAGAGGCCATAGATGACGTCCGTCCGTCAGGCTCTAGTCAGCCTCAGCCCAGAGCA----------------------------------------GCAG-GTTCGAA-----------TTCCACGGCACGTAGGATCCATTCCTATGAAGCTAGAGTAGTACCCAG-AGGTAAAGGGTGCGACTTGTGCAATAGAGAAAACCATCCAGTGCGGACATGCGCACGGTTTCTCCGGATGTCTGTCGATGAGCGGTCCGCCTATATCAAAGGCASizeHit CountTotal NormTotal
No Reads
droKik1
TGAACACCTTCCTAAGCGAAAGATATCGCACATTAGAGGCCATCGAGGACATGAAGCCGAC---------------------------------------------------------------------------TCAAG-----------CAGTC--CCGGAAAAGCTTCAGTCCTTCGAAACGAAAGTCAGCACCAA-ACCAAAAGGGTGTGACTTATGCTCCAAGGAGAATCATCCAGTACGCTTATGCCCGCGCTTTCTCCAAATGTCCGTCGACGCGCGTTCCGGCTACATAAAAAAGASizeHit CountTotal NormTotal
No Reads
droAna3
TGAACTCGTTTCTCAGCGAACGATATCCCACCCTGGAAGCCATAGAGGATGTTAAACCCA---GCTC----CAACCGCCTTCAAAAAAC----------------------------------------ACAG-GC-----------------------TCAAAAAGGATCAACTCCTTTGAGACCAACGTGACGCAAGG-ACCCAAAAACTGTGACCTTTGCGCAAAAGAGAATCACCCAGTGCGGGTATGTTCTCGGTTTCTCCAAATGCCCGTCAGTGAACGATCCGCATATATAAGGAGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TAGACAACTTCCTGACAGAGCGCCATCGTACTCTGGAGGCCATCGAAGATGTCAGGACTAGTGGCTCCGTGCAATTTCCGCTAAGGTCG----------------------------------------GGAA-CTCCTAC-----------TGCTCCTGCTCGAAGGCTCCATTCATACGAGACTCGAGTGGTTCCGGG-CCCCAAGGGTTGCGATGTCTGTTCGAGGGAGAACCACCCCATTCGCTTATGTCCGCGGTTCTTGGAAATGGACGTAAATGGGCGCTCGGACTACATTAAAAGGASizeHit CountTotal NormTotal
No Reads
dp5
TGGAATCCTTCCTCAGCCAGAGATACCTGACGCTCGAAGCCATCGAGGGAAACCCGTCCA---CTTCA-CACAGTCCGAAAGGTGATCC-----------------GAATCCGCCACCTTCCCGAAGCAACCC-GTTCCGCTCCCTAGGGAGTCCGGTTCCTAGGACGGTTCACTCCTTCGAGACAACCGTAAATCCGAA-CCGGAGAACGTGTGATTTTTGCGGGAAAGAGAATCACCCAATCCGGCTATGCCCGCACTTTCTCCAAATGAACGCTGATGCTCGTGCCAGCTGCATCAAACAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........CTCAGCCAGAGATACCTGACGCTC..............................................................................................................................................................................................................................................................................2462.001201200000000
...........CTCAGCCAGAGATACCTGACGCT...............................................................................................................................................................................................................................................................................2361.831101100000000
......................................................................................................................................................................................................................................................................CTCCAAATGAACGCTGATGCTCG....................2381.381101000001000
...........CTCAGCCAGAGATACCTGACGCTCG.............................................................................................................................................................................................................................................................................2561.1770700000000
.......................................................................................................................................................................................ACAACCGTAAATCCGAA-CCGGAGA.................................................................................................2471.0070700000000
...........CTCAGCCAGAGATACCTGACGC................................................................................................................................................................................................................................................................................2261.0060600000000
...........................................................................................................................GAAGCAACCC-GTTCCGCTCCCTAGGG...........................................................................................................................................................2611.0010100000000
......................................................................................................................................................................................................................................................................CTCCAAATGAACGCTGATGCTCGT...................2481.0080800000000
.......................................................................CAGTCCGAAAGGTGATCC-----------------GAATC..................................................................................................................................................................................................2391.0090900000000
......................................................................................................................................................................................................................................................................CTCCAAATGAACGCTGATGCTCGTGC.................2670.7150400100000
.............CAGCCAGAGATACCTGACGCTCGA............................................................................................................................................................................................................................................................................2470.7150500000000
.......................................................................................................................................................................................ACAACCGTAAATCCGAA-CCGGAGAA................................................................................................2570.5740300010000
.......................................................................CAGTCCGAAAGGTGATCC-----------------GAATCCG................................................................................................................................................................................................2590.5650500000000
.......................................................................CAGTCCGAAAGGTGATCC-----------------GAAT...................................................................................................................................................................................................2290.5650500000000
.......................................................................................................................................................................................ACAACCGTAAATCCGAA-CCGGA...................................................................................................2280.5040310000000
.......................................................................................................................................................................................ACAACCGTAAATCCGAA-CCGG....................................................................................................2180.5040400000000
...........CTCAGCCAGAGATACCTGACG.................................................................................................................................................................................................................................................................................2160.5030300000000
.................................................................TCA-CACAGTCCGAAAGGTGATCC-----------------.......................................................................................................................................................................................................2390.4440400000000
..................................................................CA-CACAGTCCGAAAGGTGATCC-----------------GA.....................................................................................................................................................................................................2490.4440400000000
......................................................................................................................................................................................................................................................................CTCCAAATGAACGCTGATGCTCGTG..................2570.4330300000000
...................................................................................................................................................................................................................TGTGATTTTTGCGGGAAAGAGAA.......................................................................2330.3310100000000
...............................................................................................................................................................CCTAGGACGGTTCACTCCTTC.............................................................................................................................2130.3310100000000
.........................................................................................................................................................CCGGTTCCTAGGACGGTTCACTCC................................................................................................................................2430.3310100000000
...........................................................A---CTTCA-CACAGTCCGAAAGGTGATCC-----------------GA.....................................................................................................................................................................................................2830.3310100000000
...................................................................................................................................................................................................................TGTGATTTTTGCGGGAAAGAGAAT......................................................................2430.3310100000000
...................................GAAGCCATCGAGGGAAACCCGTCCA---C.................................................................................................................................................................................................................................................2630.3310100000000
............................................................................................................................................................................................................................TGCGGGAAAGAGAATCACCCAATCCG...........................................................2660.3320200000000
...........CTCAGCCAGAGATACCTGACGCTCGA............................................................................................................................................................................................................................................................................2660.3320200000000
...................GAGATACCTGACGCTCGAAGCCA.......................................................................................................................................................................................................................................................................2370.2920200000000
.......................................................................................................................................................................................ACAACCGTAAATCCGAA-CCGGAGAACG..............................................................................................2770.2920200000000
............TCAGCCAGAGATACCTGACGCT...............................................................................................................................................................................................................................................................................2270.2920200000000
...................GAGATACCTGACGCTCGAAGCCAT......................................................................................................................................................................................................................................................................2470.2920200000000
.......................TACCTGACGCTCGAAGCCATCGA...................................................................................................................................................................................................................................................................2370.2920200000000
......................................................................................................................................................................................................................................................................CTCCAAATGAACGCTGATGCT......................2180.2520200000000
.................................................................................................................................................................................TTCGAGACAACCGTAAATCCGAA-CC......................................................................................................2580.2520200000000
.......................................................................................................................................................................................ACAACCGTAAATCCGAA-CCG.....................................................................................................2080.2520200000000
......................................................................................................................................................................................................................................................................CTCCAAATGAACGCTGATGCTC.....................2280.2520200000000
.............................................................................................................................................................................................................................................................................TGAACGCTGATGCTCGTGCCAG..............2280.2520200000000
.......................................................................CAGTCCGAAAGGTGATCC-----------------GAATCC.................................................................................................................................................................................................2490.2220200000000
.......................................................................CAGTCCGAAAGGTGATCC-----------------GAATCCGC...............................................................................................................................................................................................2690.2220200000000
.................................................................TCA-CACAGTCCGAAAGGTGATCC-----------------G......................................................................................................................................................................................................2490.2220200000000
..................................................................CA-CACAGTCCGAAAGGTGATCC-----------------G......................................................................................................................................................................................................2390.2220200000000
......................................................................ACAGTCCGAAAGGTGATCC-----------------GAATC..................................................................................................................................................................................................2490.2220200000000
......................................................................ACAGTCCGAAAGGTGATCC-----------------GAA....................................................................................................................................................................................................2290.2220200000000
.................................................................TCA-CACAGTCCGAAAGGTGATCC-----------------GAATC..................................................................................................................................................................................................2890.2220200000000
......................................................................ACAGTCCGAAAGGTGATCC-----------------GA.....................................................................................................................................................................................................2190.2220200000000
..........CCTCAGCCAGAGATACCTGACGCTCG.............................................................................................................................................................................................................................................................................2660.1710100000000
..........CCTCAGCCAGAGATACCTGACGCT...............................................................................................................................................................................................................................................................................2460.1710100000000
...................................................................................................................................................................................................................................AAGAGAATCACCCAATCCGGCTATGC....................................................2660.1710100000000
........................................................................................................................................................................................................................................AATCACCCAATCCGGCTATGCCCGCAC..............................................2760.1710100000000
...................................................................................................................................................................................................................................AAGAGAATCACCCAATCCGGCTATG.....................................................2560.1710100000000
.........TCCTCAGCCAGAGATACCTGACGCTC..............................................................................................................................................................................................................................................................................2660.1710100000000
.........TCCTCAGCCAGAGATACCTGACGCTCGA............................................................................................................................................................................................................................................................................2860.1710100000000
........................................................................................................................................................................................................................................AATCACCCAATCCGGCTATGCCC..................................................2360.1710100000000
...............GCCAGAGATACCTGACGCTCGAAG..........................................................................................................................................................................................................................................................................2470.1410100000000
..............AGCCAGAGATACCTGACGCTCGAAG..........................................................................................................................................................................................................................................................................2570.1410100000000
.............CAGCCAGAGATACCTGACGCTC..............................................................................................................................................................................................................................................................................2270.1410100000000
........................................................................................................................................................................................CAACCGTAAATCCGAA-CCGGAGA.................................................................................................2370.1410100000000
.......................................................................................................................................................................................................................................................................TCCAAATGAACGCTGATGCTCGTGCCAGC.............2970.1410100000000
.......................................................................................................................................................................................................................................................................TCCAAATGAACGCTGATGCTCGTGC.................2570.1410100000000
..........................................................................................................................................................................................................................................TCACCCAATCCGGCTATGCCCGCAC..............................................2570.1410100000000
.......................TACCTGACGCTCGAAGCCATCGAGG.................................................................................................................................................................................................................................................................2570.1410100000000
.........................CCTGACGCTCGAAGCCATCGAGG.................................................................................................................................................................................................................................................................2370.1410100000000
........................................................................................................................................................................................CAACCGTAAATCCGAA-CCGGAGAAC...............................................................................................2570.1410100000000
...................GAGATACCTGACGCTCGAAGC.........................................................................................................................................................................................................................................................................2170.1410100000000
.........................CCTGACGCTCGAAGCCATCGAGGG................................................................................................................................................................................................................................................................2470.1410100000000
...........................................................................................................................................................................................................................TTGCGGGAAAGAGAATCACCCAAT..............................................................2470.1410100000000
.......................................................................................................................................................................................ACAACCGTAAATCCGAA-CCGGAG..................................................................................................2370.1410100000000
.......................................................................................................................................................................................................................................................................TCCAAATGAACGCTGATGCTCGTG..................2470.1410100000000
.......................TACCTGACGCTCGAAGCCATCGAGGG................................................................................................................................................................................................................................................................2670.1410100000000
............................................................................................................................................................................................................................................................CCCGCACTTTCTCCAAATGAACGCTGA..........................2770.1410100000000
............TCAGCCAGAGATACCTGACGC................................................................................................................................................................................................................................................................................2170.1410100000000
.............CAGCCAGAGATACCTGACGCTCG.............................................................................................................................................................................................................................................................................2370.1410100000000
................CCAGAGATACCTGACGCTCGA............................................................................................................................................................................................................................................................................2170.1410100000000
.............................................................................................................................................................................................................................GCGGGAAAGAGAATCACC..................................................................1870.1410100000000
.............................................................................................................TCCGCCACCTTCCCGAAGCAACC.............................................................................................................................................................................2370.1410010000000
......................................................................................................................................................................................GACAACCGTAAATCCGAA-CCGGAGA.................................................................................................2570.1410100000000
................................................................................................................................................................................................................................................................CACTTTCTCCAAATGAACGCTGA..........................2370.1410100000000
......................................................................................................................................................................................GACAACCGTAAATCCGAA-CCGGAG..................................................................................................2470.1410100000000
......................................................................................................................................................................................................................................................................CTCCAAATGAACGCTGATGCTCGTGCC................2770.1410100000000
...........................................................................................................................................................................................................................TTGCGGGAAAGAGAATCAA...................................................................1970.1410100000000
............................................................................................................................................................................................................................TGCGGGAAAGAGAATCACCCA................................................................2170.1410100000000
....................AGATACCTGACGCTCGAAGCCAT......................................................................................................................................................................................................................................................................2370.1410100000000
.............CAGCCAGAGATACCTGACGCTCGAAG..........................................................................................................................................................................................................................................................................2670.1410100000000
.......................................................................................................................................................................................................................................................................................TGCTCGTGCCAGCTGCATCA......2080.1310100000000
...................................................................................................................................................................................................................................................................TTTCTCCAAATGAACGCTGATGC.......................2380.1310100000000
...................................................................................TGATCC-----------------GAATCCGCCACCTTCCCGAAG..................................................................................................................................................................................2780.1310100000000
......................................................................................TCC-----------------GAATCCGCCACCTTCCCGAAG..................................................................................................................................................................................2480.1310100000000
.......................................................................................................................................................................................ACAACCGTAAATCCGAA-CCGGC...................................................................................................2280.1310100000000
.....................................................................................................................................................................................................................................................................TCTCCAAATGAACGCTGATGCTCGT...................2580.1310100000000
.....................................................................................................................................................................................AGACAACCGTAAATCCGAA-CCGGA...................................................................................................2480.1310000000100
........................................................................................................................................................................................CAACCGTAAATCCGAA-CCGG....................................................................................................2080.1310100000000
.............................................................................................................................................................................................................................................................................TGAACGCTGATGCTCGTGCCAGCT............2480.1310100000000
...................................................................................TGATCC-----------------GAATCCGCCACCTTCCCG.....................................................................................................................................................................................2480.1310100000000
............................................................................................................................................................................................................................................................................ATGAACGCTGATGCTCGTGC.................2080.1310100000000
..........................CTGACGCTCGAAGCCATCGAGGG................................................................................................................................................................................................................................................................2380.1310100000000
...............................................................................................................................................................................................................................................CAATCCGGCTATGCCCGCACTTT...........................................2380.1310100000000
.......................................................................................................................................................................................................................................................................TCCAAATGAACGCTGATGCTCGT...................2380.1310100000000
...................................................................................................................................................................................................................................................................TTTCTCCAAATGAACGCTGATGCTT.....................2580.1310000100000
......................................................................................................................................................................................GACAACCGTAAATCCGAA-CCGG....................................................................................................2280.1310100000000
.......................................................................................................................................................................................ACAACCGTAAATCCGAA-C.......................................................................................................1880.1310100000000
.......................................................................................................................................................................................................................................................................TCCAAATGAACGCTGATGCTCG....................2280.1310100000000
..............................................................................................................................................................................TCCTTCGAGACAACCGTAAATCCGAA-........................................................................................................2680.1310100000000
..................................................................................................................................................................................................................................................................CTTTCTCCAAATGAACGCTGATG........................2380.1310100000000
...................................................................A-CACAGTCCGAAAGGTGATCC-----------------G......................................................................................................................................................................................................2290.1110100000000
.................................................................TCA-CACAGTCCGAAAGGTGATCC-----------------GA.....................................................................................................................................................................................................2590.1110100000000
......................................................................ACAGTCCGAAAGGTGATCC-----------------GAATCCGT...............................................................................................................................................................................................2790.1110100000000
.....................................................................CACAGTCCGAAAGGTGATCC-----------------GAAT...................................................................................................................................................................................................2490.1110100000000
......................................................................ACAGTCCGAAAGGTGATCC-----------------GAAT...................................................................................................................................................................................................2390.1110100000000
......................................................................ACAGTCCGAAAGGTGATCC-----------------G......................................................................................................................................................................................................2090.1110100000000
........................................................................AGTCCGAAAGGTGATCC-----------------GAATCC.................................................................................................................................................................................................2390.1110100000000
.................................................................TCA-CACAGTCCGAAAGGTGATC.........................................................................................................................................................................................................................2290.1110100000000
TGGAATCCTTCCTCAGCCAGAGATAC.......................................................................................................................................................................................................................................................................................2690.1110100000000
........................................................................AGTCCGAAAGGTGATCC-----------------GAATCCG................................................................................................................................................................................................2490.1110100000000
..........................................................................TCCGAAAGGTGATCC-----------------GAATCCGCCAC............................................................................................................................................................................................26100.1010100000000
...................................................................................TGATCC-----------------GAATCCGCCACCTT.........................................................................................................................................................................................20110.0910100000000
droPer2
TGGACAAGTTCCTGGCGGAGCGGTACCTGTCTCTCGAAGTAACCGAGGACGACCATCAAGGCATGGAGACTCAGGCCCACTCCACGGCGAGCATACGCACTTCAGACAAT-------------------TCGA-GAAGCAA-----------TCCTTATCCTAGGAGTGTCCACTCGTTCGAGACCACAGTGAATCAAAC-GAGGAGCACGTGTGATCTCTGCTCCAAAGAGTATCATCCAATCCGTTTATGCCCTTACTTCCTTCAAATGCCCGCTGACGATCGCTCCGACTACATTAAGCAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................TACTTCCTTCAAATGCCCGCTGACG........................25100.303030000
............................................................................................................................................................................................AGTGAATCAAAC-GAGGAGCACGTG............................................................................................24140.213030000
...............................................................................................................................................................................................................................................................TTACTTCCTTCAAATGCCCGCTGACG........................26100.202020000
TGGACAAGTTCCTGGCGGAGCGGTA........................................................................................................................................................................................................................................................................................25200.153030000
.......................................................TCAAGGCATGGAGACTCAGGCCCACTCCA.............................................................................................................................................................................................................................2970.141010000
.......................................................TCAAGGCATGGAGACTCAGGCCCACTC...............................................................................................................................................................................................................................2770.141010000
...............................................................................................................................................................................................................................................................TTACTTCCTTCAAATGCCCGCTG...........................23140.142020000
............................................................................................................................................................................................AGTGAATCAAAC-GAGGAGCACGT.............................................................................................23160.132020000
............................................................................................................................................................TATCCTAGGAGTGTCCACTCGTTC.............................................................................................................................24100.101010000
.......GTTCCTGGCGGAGCGGTA........................................................................................................................................................................................................................................................................................18200.102020000
................................................................................................................................................................................................................................................................TACTTCCTTCAAATGCCCGCTGAC.........................24100.101010000
................................................................................................................................................................................................................................................................TACTTCCTTCAAATGCCCGCTGA..........................23100.101010000
............................................................................................................................................................................................AGTGAATCAAAC-GAGGAGCACGTGTGA.........................................................................................27140.071000001
............................................................................................................................................................................................AGTGAATCAAAC-GAGGAGCAC...............................................................................................21160.061000001
........................................................................................................................................................................................CCACAGTGAATCAAAC-GAGGAGCA................................................................................................24160.061000001
.........................................................................................................................................................................................CACAGTGAATCAAAC-GAGGAGCAC...............................................................................................24160.061001000
.........................................................................................................................................................................................CACAGTGAATCAAAC-GAGGAGCA................................................................................................23160.061000001
........................................................................................................................................................................................CCACAGTGAATCAAAC-GAGGAGCACG..............................................................................................26160.061010000
.................................................................................................................................................................................................................................................................ACTTCCTTCAAATGCCCGCTGT..........................22170.061010000
.........TCCTGGCGGAGCGGTACCTGTCTCTC..............................................................................................................................................................................................................................................................................26200.051100000
droWil2
TGGACAATTTCCTCACCGAGCGGTTTCGTACGCTCGAAGCGGTTGAAAATACCACCGCTAT-GGCTATTTCGGTTCCCACATCGAAACC-----------------------------TCCG-------CGAA-ATCCGCT-----------TCCAGCCACCCGAAAGGCTAATACATTTGAAGCCAAGGTGACCACCAA-ACCAAAATCCTGTGATCTCTGTATGAAGGAGAATCACCCGGTGCGTCGATGTCCCCGCTTCCTTCAGATGTCGGTGCCAGAGAGGGTGGCATACATAAAGAAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................A-ACCAAAATCCTGTGATCTCT....................................................................................21200.6513130000
.........TCCTCACCGAGCGGTTTCGTACG.................................................................................................................................................................................................................................................................................2340.25100010
..........................................................................................................................................................................TAATACATTTGAAGCCAAGGTGACC..............................................................................................................25200.20404000
.............................................................................................................................................................................TACATTTGAAGCCAAGGTGACCAC............................................................................................................24200.20400040
..............................................................................................................................................................................................................................TATGAAGGAGAATCACCCGGT..............................................................21200.20440000
.............................................................................................................................................................................TACATTTGAAGCCAAGGTGACCA.............................................................................................................23200.15303000
............................................................................................................................................................................ATACATTTGAAGCCAAGGTGA................................................................................................................21200.15303000
........................................................................................................................................................................................................................TCTCTGTATGAAGGAGAATCACCC.................................................................24200.10202000
.........................................................................................................................................................................................................................CTCTGTATGAAGGAGAATCACCCGGT..............................................................26200.10202000
............................................................................................................................................................................................................................TGTATGAAGGAGAATCACCCGGTGCG...........................................................26200.10201010
.............................................................................................................................................................................................GTGACCACCAA-ACCAAAATCCTGTGA.........................................................................................26200.10202000
...........................................................................................................................................................................AATACATTTGAAGCCAAGGTGACCA.............................................................................................................25200.10202000
..........................................................................................................................................................................TAATACATTTGAAGCCAAGGTGACCAC............................................................................................................27200.10200020
...................................................................................................................................................................................................................................AGGAGAATCACCCGGTGCGTC.........................................................21200.10200002
................................................................................................................................................................................................................................TGAAGGAGAATCACCCGGTGCGTCG........................................................25200.10202000
...............................................................................................................................................................................................GACCACCAA-ACCAAAATCCTG............................................................................................21200.10202000
............................................................................................................................................................................................................AAAATCCTGTGATCTCTGTATG...............................................................................22200.10220000
......................................................................................................................................................................................................................................................................................CAGAGAGGGTGGCATACAT........19200.10202000
...........................................................................CCCACATCGAAACC-----------------------------TCCG-------CGAA-ATCCGCT-----------.........................................................................................................................................................29120.08101000
.............................................................................CACATCGAAACC-----------------------------TCCG-------CGAA-ATCCG......................................................................................................................................................................25120.08101000
.............................................................................CACATCGAAACC-----------------------------TCCG-------CGAA-ATCCGCT-----------.........................................................................................................................................................27120.08101000
.................................................................................TCGAAACC-----------------------------TCCG-------CGAA-ATCCGCT-----------TCC......................................................................................................................................................26160.06101000
............................................................................CCACATCGAAACC-----------------------------TCCG-------CGAA-ATC........................................................................................................................................................................24160.06101000
...........................................................................CCCACATCGAAACC-----------------------------TCCG-------CGAA-AT.........................................................................................................................................................................24170.06101000
............................................................................CCACATCGAAACC-----------------------------TCCG-------CGAA-AT.........................................................................................................................................................................23180.06101000
.............................................................................................................................................................................................................AAATCCTGTGATCTCTGTATGAAGG...........................................................................25200.05101000
........................................................................................................................................................TCCAGCCACCCGAAAGGCTAATACATT..............................................................................................................................27200.05101000
...............................................................................................................................................................................................................................................CGGTGCGTCGATGTCCCCGCTTC...........................................23200.05100010
..................................................................................................................................................................................................CACCAA-ACCAAAATCCTGTGATCTCTGTA.................................................................................29200.05101000
....................................................................................................................................................................................................CCAA-ACCAAAATCCTGTGATCTCTG...................................................................................25200.05101000
......................................................................................................................................................................................................................................................TCGATGTCCCCGCTTCCTTCAGATG..................................25200.05101000
...........................................................................................................................................................................AATACATTTGAAGCCAAGGT..................................................................................................................20200.05101000
...............................................................................................................................................................................................................ATCCTGTGATCTCTGTATGAAG............................................................................22200.05101000
................................................................................................................................................................................................................................TGAAGGAGAATCACCCGGTGCGTC.........................................................24200.05101000
.............................................................................................................................................................................................................AAATCCTGTGATCTCTGTA.................................................................................19200.05110000
..........................................................................................................................................................................................................................................TCACCCGGTGCGTCGATGTCCCCGCTT............................................27200.05101000
...................................................................................................................................................................................................................................AGGAGAATCACCCGGTGCGTCGAT......................................................24200.05101000
................................................................................................................................................................................ATTTGAAGCCAAGGTGACCACC...........................................................................................................22200.05100001
...........................................................................................................................................................................................................................CTGTATGAAGGAGAATCACCCGGTGCGT..........................................................28200.05110000
..........................................................................................................................................................................................................CCAAAATCCTGTGATCTCTG...................................................................................20200.05101000
..........................................................................................................................................................................................................................TCTGTATGAAGGAGAATCACCCGGTG.............................................................26200.05100010
..........................................................................................................................................................................................................CCAAAATCCTGTGATCTCTGT..................................................................................21200.05101000
...................................................................................................................................................................................................ACCAA-ACCAAAATCCTGTGATCTCT....................................................................................25200.05101000
....................................................................................................................................................................................................................................................CGTCGATGTCCCCGCTTCCTTCAGA....................................25200.05100010
.......................................................................................................................................................................................................A-ACCAAAATCCTGTGATCTCG....................................................................................21200.05110000
...................................................................................................................................................................................................ACCAA-ACCAAAATCCTGTGAT........................................................................................21200.05101000
.........................................................................................................................................................................................................................................ATCACCCGGTGCGTCGATGTCCCCGC..............................................26200.05101000
...................................................................................................................................................................................................ACCAA-ACCAAAATCCTGTGATC.......................................................................................22200.05101000
................................................................................................................................................................................................................................TGAAGGAGAATCACCCGGTG.............................................................20200.05100010
.............................................................................................................................................................................................................................................CCCGGTGCGTCGATGTCCA.................................................19200.05100001
.........................................................................................................................................................................................................................CTCTGTATGAAGGAGAATCACCCGGTGCG...........................................................29200.05101000
............................................................................................................................................................................................................................TGTATGAAGGAGAATCACCCGGTGC............................................................25200.05100010
................................................................................................................................................................................................................................................GGTGCGTCGATGTCCCCGCTTC...........................................22200.05101000
...........................................................................................................................................................................AATACATTTGAAGCCAAGGTGACCAC............................................................................................................26200.05101000
...................................................................................................................................................................................................................................................GCGTCGATGTCCCCGCTTCCTT........................................22200.05101000
droVir3
TGAATTCATTTCTGATCGACCGATATCGCACCTTGGAGGCGATAGAGGATGTACGACCTACCGCACATACGCCACCCCAGTCGAAACCC-----------------------------------------------ACAAG-----------AAAAGAGTCCAACCACCTGAGAACCTTCGAAGCAACAGTGACTACAAA-GTCGCAACACTGCAAATTGTGTCAGAAGGAAAACCATCCCGTGCGTCTATGCCCACGTTTTCTACAAATGTCCGTACCCGAGAGAGTTTCCGTCATTAAGCAACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATC..................................................................241321.382780000211103156807000000031009852922221542670788100300010100000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATCC.................................................................251312.381610000011002020100000001100152622241673119046350100000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATCCC................................................................2699.118200001330200030000000300423151021045034680000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATCCCGT..............................................................2868.83530000200010002000000000002216310313052640000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATCCCG...............................................................2768.33500000001010000000000000021411733052022330000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACAG...................................................................................................................2696.89620050201000001000000000044416910122011023100000010000000000010000
..................................................GTACGACCTACCGCACATACGCCAC......................................................................................................................................................................................................................................2566.33380026100000000000000000000011210003001200000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCAT...................................................................23136.31820000122000001000000012001216101424122061030000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAAC.....................................................................................................................24106.2062003130200100010000005003346722231310210000121000000000000200000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACAGT..................................................................................................................2795.6751001020002000000000000001134604122023320014210100000000000300000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAA......................................................................................................................23105.30530030200020002000000020030223103130001222201000000000000000500000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACA....................................................................................................................25104.0040001020000000000000001001339230143010111100010000100000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCA.......................................................................................................................22103.5035003050200000000000003000114111211040013000000000000100000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACAGTG.................................................................................................................2893.2229203000000000000000000000054410101010501000100000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGC........................................................................................................................21103.2032001002200000000000004002102030111100012012110000000000000210000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACC.....................................................................21132.5433000002104210100000002003101223240001100000000000000000000000000
..................................................GTACGACCTACCGCACATACGCCA.......................................................................................................................................................................................................................................24102.20220012000000000000000000000211210002010000000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCA....................................................................22132.0827000000100001000000001000235323121000110000000000000000000000000
................................................................................TCGAAACCC-----------------------------------------------ACAAG-----------AAAAGAGTCC...............................................................................................................................................2412.002000000000000000000000000000000020000000000000000000000000000000
..................................................GTACGACCTACCGCACATACGC.........................................................................................................................................................................................................................................22101.8018003000000000000000000000122213010010011000000000000000000000000
..................................................GTACGACCTACCGCACATACGCC........................................................................................................................................................................................................................................23101.80180017000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATT..................................................................24131.6922000000012110200000001001012020041011100000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAG.........................................................................................................................20101.6016000000003000000000003000000020230000011000000000100000000000000
............................................................................CCAGTCGAAACCC-----------------------------------------------ACAAG-----------AAAAGAGTC................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
.................................................................................CGAAACCC-----------------------------------------------ACAAG-----------AAAAGAGTCCA..............................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................TTGTGTCAGAAGGAAAACCATCCC................................................................24101.0010000040000000000000001000000000001010101000000000000000000000010
...........................................................................CCCAGTCGAAACCC-----------------------------------------------ACAAG-----------AAAAG....................................................................................................................................................2411.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................TTGTGTCAGAAGGAAAACCATC..................................................................22141.0014000110000000010000000000010010000031100400000000000000000000000
.........................................................................................................................................................................................................................TTGTGTCAGAAGGAAAACCATCC.................................................................23141.0014007220000000000000000000000000000100010000000000000000000000010
...................................................................................................................................................................................................................................................................TTTCTACAAATGTCCGTACCCGAGAGA...................27140.9313000000000000000000000000030201000050200000000000000000000000000
....................................................................................................................................................................................................................................................................................ACCCGAGAGAGTTTCCGTCATTAAGC...26110.9110000030000000000000000000000000001000001000000000000000000000005
....................................................................................................................................................................................................................................................................................ACCCGAGAGAGTTTCCGT...........18110.738000000000000000000000000000000000000000000000000000000000000008
.................................................................................................................................................................CAACCACCTGAGAACCTTCGAAGC........................................................................................................................2490.676000000000000000000000000000200000000200000000011000000000000000
..........................................................................................................................................................................................................................TGTGTCAGAAGGAAAACCATCCC................................................................23100.606001020100000000000000000000000010000000100000000000000000000000
...................................................................................................................................................................................................................................................................TTTCTACAAATGTCCGTACCC.........................21150.609000000000000000000000001012110100010000100000000000000000000000
...........................................................................................................................................................................................................................GTGTCAGAAGGAAAACCATCCCGT..............................................................2470.574000020000000000000000000010010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TTTCTACAAATGTCCGTACCCG........................22140.578000000200000000000000000000410010000000000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAAC......................................................................20130.547000002000020000000000000000000020000010000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATCT.................................................................25130.547000000000000000000001000103110000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACAT...................................................................................................................26100.505002000000000000000000000200000000000000001000000000000000000000
.............................................................................................................................................................................................................................GTCAGAAGGAAAACCATCCCGTGC............................................................2460.503000000000000000000001001000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................ACAAATGTCCGTACCCGAGAGAGTT................25100.505000000000000000000000000000300010000000000000000000000000000010
....................................................................................................................................................................CCACCTGAGAACCTTCGAA..........................................................................................................................19100.505000000000000000000002000010000000000020000000000000000000000000
...................................................................................................................................................................................................................................................................TTTCTACAAATGTCCGTACCCGA.......................23140.507000000000000000000000000000211200010000000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATTT.................................................................25130.466000000011000000000000000001000011000100000000000000000000000000
...................................................................................................................................................................................................................................................................TTTCTACAAATGTCCGTACCCGAGAGAG..................2890.444000000000000000000000000010000010020000000000000000000000000000
................................TTGGAGGCGATAGAGGATGTACGACC.......................................................................................................................................................................................................................................................2670.433000000000000010000001000000000001000000000000000000000000000000
.........................................................................................................................................................................................................................TTGTGTCAGAAGGAAAACCATCCCGT..............................................................2670.433001000000000000000000000010000100000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAAT.....................................................................................................................24100.404000000100000000000000000000000002100000000000000000000000000000
........................................................................................................................................................................................................................................................................................GAGAGAGTTTCCGTCATTAAGC...22110.364000000100000000000000000100000000000200000000000000000000000000
....................................................................................................................................................................................................................................................................................ACCCGAGAGAGTTTC..............15110.364000000000000000000000000000000000000000000000000000000000000004
....................................................................................................................................................................................................................................................................................ACCCGAGAGAGTTTCCGTC..........19110.364000010000000000000000000000000000000000000000000000000000000003
..........................................................................................................................................................................................................................TGTGTCAGAAGGAAAACCATCC.................................................................22140.365001000100000010000000000011000000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACAGTGACT..............................................................................................................3190.333000000000000000000000000000000000000000000110000100000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATAT.................................................................25130.314000000000000000000000000001020000010000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAAA.....................................................................................................................24100.303000000000000000000000000001000000000001000100000000000000000000
........................................................................................................................................................................................................................................................................ACAAATGTCCGTACCCGAGAGAG..................23100.303000000000000000000000000000200000000100000000000000000000000000
..........................................................................................................................................................................................................................TGTGTCAGAAGGAAAACCATC..................................................................21140.294000010000000010000000000000000000100000100000000000000000000000
.........................................................................................................................................................................................................................TTGTGTCAGAAGGAAAACCATCCCG...............................................................2570.292002000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TGTGTCAGAAGGAAAACCATCCCGT..............................................................2570.292000000000000000000000000000000000000000100000000000000000000001
....................................................................................................................................................................................................................................................................................ACCCGAGAGAGTTTCCGTCATTAAG....25110.273000000000000000000000000000000000000000000000000000000000000003
...................................................................................................................................................................................................................................................................................TACCCGAGAGAGTTTCCGTCATT.......23110.273000000000000000000000000001000000001010000000000000000000000000
...................................................................................................................................................................................................................................................................TTTCTACAAATGTCCGTACC..........................20150.274000000000000000000000000010100000010010000000000000000000000000
..................................................GTACGACCTACCGCACATACGCCACC.....................................................................................................................................................................................................................................2640.251000100000000000000000000000000000000000000000000000000000000000
..................................................GTACGACCTACCGCACATACGCCACCC....................................................................................................................................................................................................................................2740.251000000000000000000000000000000000000100000000000000000000000000
.........................TCGCACCTTGGAGGCGATAGAGGATGTAC...........................................................................................................................................................................................................................................................2940.251000000000000000000000000000000100000000000000000000000000000000
........................................................................................................................................................................................................................................................................ACAAATGTCCGTACCCGAGAGA...................22160.254000000000000000000000000000000020000200000000000000000000000000
...................................................TACGACCTACCGCACATACGCCACCCC...................................................................................................................................................................................................................................2740.251000000000000000000000000000000000000000000000000000000000000001
TGAATTCATTTCTGATCGACCGATA........................................................................................................................................................................................................................................................................................25130.233002000000000000000000000000000010000000000000000000000000000000
.................................................TGTACGACCTACCGCACATACGCC........................................................................................................................................................................................................................................2490.222002000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATCCCC...............................................................2790.222000000000000000000000000000000200000000000000000000000000000000
......................................................................................................................................................................ACCTGAGAACCTTCGAAGCAACAG...................................................................................................................2490.222000000000000000000000000000000000000100100000000000000000000000
.....................................................................................................................................................................CACCTGAGAACCTTCGAAGCAACAGT..................................................................................................................2690.222001000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................CACCTGAGAACCTTCGAAGCAACAGTG.................................................................................................................2790.222000000000000000000000000101000000000000000000000000000000000000
.................................................................................................................................................................CAACCACCTGAGAACCTTCGAAGCAA......................................................................................................................2690.222000000000000000000000000000100000000000000001000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACAGTT.................................................................................................................2890.222001000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TGAGAACCTTCGAAGCAACAG...................................................................................................................2190.222000010000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................CACCTGAGAACCTTCGAAGCAACAG...................................................................................................................2590.222000000000000000000000000010000100000000000000000000000000000000
.................................................................................................................................................................CAACCACCTGAGAACCTTCGAAG.........................................................................................................................2390.222000000000000000000000000000100000000000000000000100000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACAGTGA................................................................................................................2990.222000000000000000000000000000000000000000001000000000000000100000
...................................................................................................................................................................................................................................................................TTTCTACAAATGTCCGTACCCGAG......................24140.213000000000000000000000000010101000000000000000000000000000000000
..................................................GTACGACCTACCGCACATACGT.........................................................................................................................................................................................................................................22100.202000000100000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAATTC...................................................................................................................26100.202000000000000000000000000001100000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAATT....................................................................................................................25100.202000000000000000000000000000100000010000000000000000000000000000
...................................................................................................................................................................................................................................................................TTTCTACAAATGTCCGTAC...........................19150.203000000010000000000000000011000000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACT....................................................................................................................25100.202000000000000000000000000101000000000000000000000000000000000000
..................................................GTACGACCTACCGCACATACG..........................................................................................................................................................................................................................................21100.202002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................AAATTGTGTCAGAAGGAAAACCATCCCGT..............................................................2950.201000000000000000000000000000000000000000000000000000000000000001
...................................................TACGACCTACCGCACATACGC.........................................................................................................................................................................................................................................21100.202001100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACTT...................................................................................................................26100.202000000000000000000000000010000000000010000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAT......................................................................................................................23100.202000010000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................AACCACCTGAGAACCTTCGAAGC........................................................................................................................23100.202000000000000000000000001000000000000000000100000000000000000000
........................................................................................................................................................................................................................ATTGTGTCAGAAGGAAAACCATCCCGTGC............................................................2950.201000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................................................................................................................................................ACAAATGTCCGTACCCGAGA.....................20160.193000000000100000000000000000000000000200000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATCCCT...............................................................27110.182000000000000100000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................ACCCGAGAGAGTTTCCGTCATTTT.....24110.182000000000000000000000000000000000000000000000000000000000000002
..................................................GTACGACCTACCGCACATAC...........................................................................................................................................................................................................................................20110.182000000000000000000000000101000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TGCGTCTATGCCCACGTTTTCTACAA.....................................26110.182000000000000000000000000001000000000001000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATCCCTC..............................................................28110.182000000000000100000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................TGCGTCTATGCCCACGTTTTCTACAAA....................................27110.182000000000000000000000000000110000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................ACCCGAGAGAGTTTCCGTCATTAAGCAAC29110.182000000000000000000000000000000000000000000000000000000000000002
........................................................................................................................................................................................................................................................................................GAGAGAGTTTCCGTCATTAAGCA..23110.182000000100000000000000000001000000000000000000000000000000000000
..........................................TAGAGGATGTACGACCTACCGCACATA............................................................................................................................................................................................................................................2760.171000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................TGTGTCAGAAGGAAAACCATCCCGTGCA...........................................................2860.171000000000000000000000000000000100000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGA...........................................................................................................................18120.172000000000000000000000000001000000000000000000000000000000100000
........................................................................................................................................................................................................................ATTGTGTCAGAAGGAAAACCATCCCG...............................................................2660.171000000000000000000000000000000000010000000000000000000000000000
..........................................TAGAGGATGTACGACCTACCGCACATC............................................................................................................................................................................................................................................2760.171000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................................................................TCAGAAGGAAAACCATCCCGTGCGTCT........................................................2760.171000000000000000000000000000000000001000000000000000000000000000
...................................................TACGACCTACCGCACATACGCCAC......................................................................................................................................................................................................................................2460.171001000000000000000000000000000000000000000000000000000000000000
..........................................TAGAGGATGTACGACCTACCGCACAT.............................................................................................................................................................................................................................................2660.171000000000000000000000000001000000000000000000000000000000000000
..........................................TAGAGGATGTACGACCTACCGCACA..............................................................................................................................................................................................................................................2560.171000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................TCAGAAGGAAAACCATCCCGTGCGT..........................................................2560.171000000000000000000000000000100000000000000000000000000000000000
.......................................................................................CC-----------------------------------------------ACAAG-----------AAAAGAGTCCAA.............................................................................................................................................1960.171000000000000000000000001000000000000000000000000000000000000000
..........................................TAGAGGATGTACGACCTACCGCACATAC...........................................................................................................................................................................................................................................2860.171000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAA.......................................................................19130.152000000200000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATTA.................................................................25130.152000000000000000000000000002000000000000000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATCA.................................................................25130.152000000000000000000000000000000000011000000000000000000000000000
...ATTCATTTCTGATCGACCGATAT.......................................................................................................................................................................................................................................................................................23130.152000000200000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATTG.................................................................25130.152000000000000000000000000000000000010100000000000000000000000000
...ATTCATTTCTGATCGACCGAT.........................................................................................................................................................................................................................................................................................21130.152000000100000000000000000000000000000000000000000000000000000001
.......................................................................................................................................................................................................................AATTGTGTCAGAAGGAAAACCATA..................................................................24130.152000000000000100000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................CGTGCGTCTATGCCCACGTTTG...........................................2270.141000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................CGTGCGTCTATGCCCACGTTTTG..........................................2370.141000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................CGTGCGTCTATGCCCACGTTTTC..........................................2370.141000000000000000000000000001000000000000000000000000000000000000
.................................TGGAGGCGATAGAGGATGTACGACCTT.....................................................................................................................................................................................................................................................2770.141000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................TCAGAAGGAAAACCATCCCGT..............................................................2170.141000000000000000000000000000000100000000000000000000000000000000
.................................TGGAGGCGATAGAGGATGTACGAC........................................................................................................................................................................................................................................................2470.141000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................................TGTGTCAGAAGGAAAACCATCCCGTG.............................................................2670.141000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................................................................................................................................TTGTGTCAGAAGGAAAACCATCCCGTTT............................................................2870.141001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TTTCTACAAATGTCCGTACCCGAGA.....................25140.142000000000000000000000000000100010000000000000000000000000000000
................................TTGGAGGCGATAGAGGATGTACGAA........................................................................................................................................................................................................................................................2570.141000000000000000000000000000000000001000000000000000000000000000
................................................................................................................................................................................................................................................CGTGCGTCTATGCCCACGTTTTCTACAAT....................................2970.141000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................TGTGTCAGAAGGAAAACCATCCCG...............................................................2470.141000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................................................................................................GTGTCAGAAGGAAAACCATCCCG...............................................................2370.141000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................GTCAGAAGGAAAACCATC..................................................................18150.132000002000000000000000000000000000000000000000000000000000000000
............................................................................................................................................G-----------AAAAGAGTCCAACCACCTGA.....................................................................................................................................2180.131000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................................................................................ACACTGCAAATTGTGTCAGAAGGATT........................................................................2680.131000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................................................................................................AATGTCCGTACCCGAGAGAGTTTC..............2480.131000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................ATGTCCGTACCCGAGAGA...................18160.132000000000000000000000000101000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AATGTCCGTACCCGAGAGAGTTTCC.............2580.131000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................ACACTGCAAATTGTGTCAGAAGGA..........................................................................2480.131000000000000000000000000000001000000000000000000000000000000000
...........................................AGAGGATGTACGACCTACCGC.................................................................................................................................................................................................................................................2180.131000000000000000000000000000000000000000000000000000000000000010
.......................................CGATAGAGGATGTACGACCTACC...................................................................................................................................................................................................................................................2380.131000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................................................................................................ACAAATGTCCGTACCCGAGAG....................21160.132000000000000000000000000000100000000100000000000000000000000000
...............................................................................................................................................................................................................ACACTGCAAATTGTGTCAGAAGGAA.........................................................................2580.131000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................ACAAATGTCCGTACCCGAGAGAGTTTC..............2780.131000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACAGTA.................................................................................................................2890.111000010000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CATCCCGTGCGTCTATGCCCAC................................................2290.111000000000000000000000000001000000000000000000000000000000000000
.........................TCGCACCTTGGAGGCGATAGAGGATGT.............................................................................................................................................................................................................................................................2790.111000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................CAACCACCTGAGAACCTTCGAAGCAAT.....................................................................................................................2790.111000000000000000000000000000000000000000001000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACAGTTT................................................................................................................2990.111000000000000000000000000000000000000000000000001000000000000000
.........................................................................................................................................................................TGAGAACCTTCGAAGCAACAGTGACT..............................................................................................................2690.111000000000000000000000000001000000000000000000000000000000000000
............................CACCTTGGAGGCGATAGAGGATGTAA...........................................................................................................................................................................................................................................................2690.111000000000000000000000000000000000001000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACAGTGG................................................................................................................2990.111000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................ACCTGAGAACCTTCGAAGCAACAGT..................................................................................................................2590.111000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GCAAATTGTGTCAGAAGGAAAA.......................................................................2290.111000000000000000000000000000000100000000000000000000000000000000
........................................................................................................................................................AAAAGAGTCCAACCACCTGAGAACC................................................................................................................................2590.111000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TGCCCACGTTTTCTACAAATGTCCGTT............................2790.111000000000000000000000000000000100000000000000000000000000000000
.....................................................................................................................................................................................................................CAAATTGTGTCAGAAGGAAAACCATCC.................................................................2790.111000000000000000000000000000100000000000000000000000000000000000
.................................................TGTACGACCTACCGCACATACG..........................................................................................................................................................................................................................................2290.111000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................TCTACAAATGTCCGTACCCGAGAGAGT.................2790.111000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................TGCCCACGTTTTCTACAAATGTCCGTAC...........................2890.111000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACAGA..................................................................................................................2790.111000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................................................CCTTCGAAGCAACAGTGA................................................................................................................1890.111000000000000000000000000001000000000000000000000000000000000000
..........................CGCACCTTGGAGGCGATAGAGG.................................................................................................................................................................................................................................................................22100.101000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCATTG....................................................................................................................25100.101000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................CACCTGAGAACCTTCGAAGCAAAT....................................................................................................................24100.101000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................................................................ACGTTTTCTACAAATGTCCGTA............................22100.101000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................AAAGAGTCCAACCACCTGA.....................................................................................................................................19100.101000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................AAGAGTCCAACCACCTGAGA...................................................................................................................................20100.101000000000000000000000000000000000000000000000000001000000000000
.....................................................................................................................................................................CACCTGAGAACCTTCGAAGC........................................................................................................................20100.101000000100000000000000000000000000000000000000000000000000000000
.........................TCGCACCTTGGAGGCGATAGAGG.................................................................................................................................................................................................................................................................23100.101000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................CACCTGAGAACCTTCGAAGCAAC.....................................................................................................................23100.101000000000000000000000000000000000000010000000000000000000000000
...................................................TACGACCTACCGCACATACG..........................................................................................................................................................................................................................................20100.101001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAAATT...................................................................................................................26100.101000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................AAAAGAGTCCAACCACCTGAG....................................................................................................................................21100.101000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAAGT....................................................................................................................25100.101000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TACAAATGTCCGTACCCGAGAGAGTT................26100.101000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................CACCTGAGAACCTTCGAAGCAA......................................................................................................................22100.101000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAATG....................................................................................................................25100.101000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACATAA.................................................................................................................28100.101000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAATTT...................................................................................................................26100.101000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ACGTTTTCTACAAATGTCCGTAT...........................23100.101000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................AATGTCCGTACCCGAGAGAGTTT...............23100.101000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................AGTCCAACCACCTGAGAACCTTC.............................................................................................................................23100.101000000000000000000000000000000100000000000000000000000000000000
....................................................ACGACCTACCGCACATACGCC........................................................................................................................................................................................................................................21100.101001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAAGTC...................................................................................................................26100.101000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAAAG....................................................................................................................25100.101000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ACGTTTTCTACAAATGTCCGTACC..........................24100.101000000000000000000000000000010000000000000000000000000000000000
....................................................ACGACCTACCGCACATACG..........................................................................................................................................................................................................................................19100.101001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AAAGAGTCCAACCACCTGAG....................................................................................................................................20100.101000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................AACCACCTGAGAACCTTCGAAG.........................................................................................................................22100.101000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................CACCTGAGAACCTTCGAAGCAATTT...................................................................................................................25100.101000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................CCACCTGAGAACCTTCGAAGCAACACA..................................................................................................................27100.101000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................AAAAGAGTCCAACCACCTGAGA...................................................................................................................................22100.101000001000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GTCAGAAGGAAAACCATCCC................................................................20100.101000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GTCCGTACCCGAGAGAGTTT...............20100.101000000001000000000000000000000000000000000000000000000000000000
...................................................TACGACCTACCGCACATACGCCA.......................................................................................................................................................................................................................................23100.101001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CACCTGAGAACCTTCGAAGCAAT.....................................................................................................................23100.101000000100000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................TTGTGTCAGAAGGAAAACCATCCCC...............................................................25100.101000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................TGTCCGTACCCGAGAGAGTTT...............21100.101000010000000000000000000000000000000000000000000000000000000000
..................................................GTACGACCTACCGCACATACGCCT.......................................................................................................................................................................................................................................24100.101000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TACCCGAGAGAGTTTCCGTCATTAAG....26110.091000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................AAACCATCCCGTGCGTCTATG.....................................................21110.091000000001000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GCGTCTATGCCCACGTTTTCTACA......................................24110.091001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................ACCCGAGAGAGTTTCCGTCATTAAGCAA.28110.091000000000000000000000000000000000000000000000000000000000000001
....................................................................................................................................................................................................................................................................................ACCCGAGAGAGTTTCCGTCA.........20110.091000000000000000000000000000000000000000000000000000000000000001
......................................................................................................................................................................................................................................................TCTATGCCCACGTTTTCTACAAATGTC................................27110.091000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TACCCGAGAGAGTTTCCGTCATTAAGCA..28110.091000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................GAGAGAGTTTCCGTCATTAAGCAA.24110.091000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CCCGAGAGAGTTTCCGTCATT.......21110.091000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TGCGTCTATGCCCACGTTTTCTACAAAT...................................28110.091000000000000000000000000000000010000000000000000000000000000000
droMoj3
TAAGCCTCTTCATTAGCGAGCATGCTCGCGCGCTTAAAGCTATGGAAGGTGACAGGTCCA---TCCCAAA----------------GGTCCCAGGTGCAGATCC--GAAA-------------------TCCA-CGGTCAC-----------CACCTCTCACAAAAGGGTCCATGCCTTCGAGACACAATTGACTCCGAA-GACCAAGAAATGCGACTTGTGCTCAAAAGAGAACCATCCGGTTCGATTGTGTCCTCGTTTCCTCCAAATGTCTCTGGCAACGCGCGAGACCTACATAAAGCGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/17/2015 at 10:31 PM