ID:

dya_395

 Coordinate:

2L:20667586-20667736 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.8 -4.7 -4.6 -4.5

Flybase annnotation

exon [dyak_GLEANR_3212:1]; CDS [Dyak\GE19437-cds]; intron [Dyak\GE19437-in]

Repeatable elements

NameClassFamilyStrand
TC1_DMDNATcMar-Tc1+
mature
  1. 3L:14493328-14493351 +
  2. dya_395  2L:20667590-20667613 +
  3. 2L:21226390-21226413 -
  4. 3R:2749594-2749617 -
  5. 3R:7473928-7473951 -
  6. 3R:7477768-7477791 -
  7. 3R:9738048-9738071 -
  8. 4:19189-19212 -
  9. v2_chrUn_340:5092-5115 -
star
  1. 3L:14493381-14493403 +
  2. dya_395  2L:20667643-20667665 +
  3. 2R:1530845-1530867 -
  4. 2R:2963375-2963397 +
  5. 3R:2009609-2009631 -
  6. 3R:2728151-2728173 -
  7. 3R:2749542-2749564 -
  8. v2_chr3R_random_171:2095-2117 -
  9. v2_chrUn_340:5040-5062 -
  10. v2_chrUn_439:536-558 -
  11. v2_chrUn_747:1733-1755 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCAAAATAAATCTGTTTCTGTTTTGGATTGGCCTGCACAGTCCCCAGGCCGTAATCCCATCAAAAATTCTTGGTCAGATATGAGAAAAGCAGTTGTACCTTCAAAGCCAACTAACAACGAATAACTTTGGGTATAATTAAGGAGTCCTGGAGCAAAATATCATTAAAACGGTGCCAGGACCTGGTTGATTCCATGCCAAAACGTTGCGATCCTGTTACTGGTAATAAGGGATACCCAACCAAATATTAAAT
******************************************************((.............(((((......((((...............))))......)))))..............))************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M026
head
 M043
female body
 V120
male body		 M056
embryo
.........ATCTGTTTCTGTTTTGGATT.............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
......................................................TCCCATCAAAAATTCTTGGTCAGA............................................................................................................................................................................. 24 0 9 0.11 1 0 1 0 0
......................................................TCCCATCAAAAATTCTTGGTCAGATA........................................................................................................................................................................... 26 0 9 0.11 1 0 1 0 0
........................................................................GTCAGATATGAGAAAAGCAGTTGT........................................................................................................................................................... 24 0 9 0.11 1 0 1 0 0
........................................................................................................................................................................................................................ACTGGTAATAAGGGATACCCA.............. 21 0 18 0.11 2 0 2 0 0
..............................................................AAAATTCTTGGTCAGATATGAG....................................................................................................................................................................... 22 0 9 0.11 1 0 0 1 0
.......................TGGATTGGCCTGCACAGTCCCCAGGCCG........................................................................................................................................................................................................ 28 0 10 0.10 1 0 1 0 0
...........................................................................................................CAACTAACAACGAATAACTTTGG......................................................................................................................... 23 0 11 0.09 1 0 1 0 0
..............................................................................................................CTAACAACGAATAACTTTGGGTAT..................................................................................................................... 24 0 11 0.09 1 0 1 0 0
..............................................................................................................CTAACAACGAATAACTTTGGGT....................................................................................................................... 22 0 12 0.08 1 0 1 0 0
.............................................................................................................................................................................................TCCATGCCAAAACGTTGCGATCC....................................... 23 0 12 0.08 1 1 0 0 0
........................................................................................................................................................................................................................ACTGGTAACAAGGGATACCCAACC........... 24 1 16 0.06 1 0 1 0 0
.........................................................................................................................................................................................................................CTGGTAATTAGGGATACCCAAC............ 22 1 18 0.06 1 0 1 0 0
........................................................................................................................................................................................................................ACTGGTAATAAGGGATACCCAAC............ 23 0 18 0.06 1 0 1 0 0
.........................................................................................................................................................................................................................CTGGTAATAAGGGATACCCAAC............ 22 0 18 0.06 1 0 1 0 0
.......................................................................................................................................ATTAAGGAGTCCTGGAGCAAA............................................................................................... 21 0 20 0.05 1 0 0 1 0
......................................................................................................................................................................................................................TTACTGATAAAAAGGGTTACCC............... 22 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

GGTTTTATTTAGACAAAGACAAAACCTAACCGGACGTGTCAGGGGTCCGGCATTAGGGTAGTTTTTAAGAACCAGTCTATACTCTTTTCGTCAACATGGAAGTTTCGGTTGATTGTTGCTTATTGAAACCCATATTAATTCCTCAGGACCTCGTTTTATAGTAATTTTGCCACGGTCCTGGACCAACTAAGGTACGGTTTTGCAACGCTAGGACAATGACCATTATTCCCTATGGGTTGGTTTATAATTTA
*************************************************************************************************************************((.............(((((......((((...............))))......)))))..............))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 GSM1528802
follicle cells		 M056
embryo
 M026
head
 V120
male body		 V058
head
 V046
embryo
...............................................................................................ATGGAAGTTTCGGTTGATTGTTGCT................................................................................................................................... 25 0 2 2.00 4 3 0 1 0 0 0 0
........................................AGGGGTCCGGCATTAGGGTAGTTT........................................................................................................................................................................................... 24 0 7 1.71 12 0 12 0 0 0 0 0
.................................................................................................GGAAGTTTCGGTTGATTGTTGCTT.................................................................................................................................. 24 0 2 1.50 3 3 0 0 0 0 0 0
.......................................CAGGGGTCCGGCATTAGGGTAGTTTT.......................................................................................................................................................................................... 26 0 6 1.17 7 0 7 0 0 0 0 0
...........................................................................................................................................TCCTCAGGACCTCGTTTTATAGTATTTT.................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................GGAAGTTTCGGTTGATTGTTGCT................................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0 0 0
.........................................................GTAGTTTTTAAGAACCAGTCTATACT........................................................................................................................................................................ 26 0 7 0.86 6 6 0 0 0 0 0 0
................................................................................................TGGAAGTTTCGGTTGATTGTTGCT................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................................................ATGGAAGTTTCGGTTGATTGTTGCTT.................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0
.................................................................................................GGAAGTTTCGGTTGAATGTTGCTT.................................................................................................................................. 24 1 2 0.50 1 1 0 0 0 0 0 0
..............................................................................................CATGGAAGTTTCGGTTGATTGTTGCT................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................TTGCAACGCTAGGACAATGACCATTAT......................... 27 0 17 0.47 8 8 0 0 0 0 0 0
.........................................................................................................................................................................................................GCAACGCTAGGACAATGACCATTAT......................... 25 0 17 0.41 7 1 6 0 0 0 0 0
.......................................CAGGGGTCCGGCATTAGGG................................................................................................................................................................................................. 19 0 8 0.38 3 0 3 0 0 0 0 0
............................................................................................................................................................................CGGTCCTGGACCAACTAAGGTACGGT..................................................... 26 0 8 0.38 3 0 2 1 0 0 0 0
.........................................................................................................................................................................................................GCAACGCTAGGACAATGACCATTATT........................ 26 0 16 0.38 6 6 0 0 0 0 0 0
...............................................................................................................................................CAGGCCCTCGTTTTATGCTA........................................................................................ 20 3 6 0.33 2 0 0 0 2 0 0 0
........................................................................................................................................................................................................TGCAACGCTAGGACAATGACCATTAT......................... 26 0 17 0.29 5 5 0 0 0 0 0 0
..........................................GGGTCCGGCATTAGGGTAGTTT........................................................................................................................................................................................... 22 0 8 0.25 2 2 0 0 0 0 0 0
................................................................................................CGGAAGTTTCGGTTGATTGTTGCGT.................................................................................................................................. 25 2 4 0.25 1 0 0 1 0 0 0 0
........................................................GGTAGTTTTTAAGAACCAGTCTAT........................................................................................................................................................................... 24 0 9 0.22 2 1 0 1 0 0 0 0
.......................................................................................................................................................................................................TTGCAACGCTAGGACAATGACCATTATT........................ 28 0 16 0.19 3 2 0 0 0 1 0 0
..............................................CCGGCATTAGGGTAGTTTTTAAGAAC................................................................................................................................................................................... 26 0 6 0.17 1 0 0 1 0 0 0 0
.......................................CAGGGGTCCGGCATTAGGGTAGTTT........................................................................................................................................................................................... 25 0 6 0.17 1 0 0 0 0 1 0 0
........................................AGGGGTCCGGCATTAGGGTAGTT............................................................................................................................................................................................ 23 0 7 0.14 1 1 0 0 0 0 0 0
.........................................GGGGTCCGGCATTAGGGTAGTTT........................................................................................................................................................................................... 23 0 7 0.14 1 0 0 1 0 0 0 0
.......................................CAGGGGTCGGGCATTAGGGTAGTTTT.......................................................................................................................................................................................... 26 1 7 0.14 1 0 1 0 0 0 0 0
.........................................................GTAGTTTTTAAGAACCGGTCTATAC......................................................................................................................................................................... 25 1 7 0.14 1 1 0 0 0 0 0 0
.........................................GGGGTCCGGCATTAGGGTAGTTTT.......................................................................................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0 0 0
..................ACAAAACCTAACCGGACGTGTCAGGGGT............................................................................................................................................................................................................. 28 0 7 0.14 1 1 0 0 0 0 0 0
.................................ACGTGTCAGGGGTCCGGCATTAGGGT................................................................................................................................................................................................ 26 0 7 0.14 1 1 0 0 0 0 0 0
.........................................GGGGTCCGGCATTAGGGTAGTT............................................................................................................................................................................................ 22 0 7 0.14 1 1 0 0 0 0 0 0
..................................CGTGTCAGGGGTCCGGCATTAGGGT................................................................................................................................................................................................ 25 0 7 0.14 1 1 0 0 0 0 0 0
........................................TGGGGTCCGGCATTAGGGTAGTTT........................................................................................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0 0 0
........................................................................................................................................................................................................TGCAACGCTAGGACAATGACCATTATT........................ 27 0 16 0.13 2 2 0 0 0 0 0 0
............................................................................................................................................................................CGGTCCTGGACCAACTAAGGTACGGTT.................................................... 27 0 8 0.13 1 1 0 0 0 0 0 0
......................................TCAGGGGTCCGGCATTAGGGT................................................................................................................................................................................................ 21 0 8 0.13 1 0 0 1 0 0 0 0
..............................................................................................................................................................................GTCCTGGACCAACTAAGGTACGGTT.................................................... 25 0 8 0.13 1 1 0 0 0 0 0 0
.......................................................................CCAGTCTATACTCTTTTCGTCAACAT.......................................................................................................................................................... 26 0 9 0.11 1 1 0 0 0 0 0 0
.................................................................................................................................CCATATTAATTCCTCAGGACCTCGTTT............................................................................................... 27 0 10 0.10 1 0 0 0 1 0 0 0
...........................................GGTCCGGCATTAGGGTAGTTT........................................................................................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0 0 0
...........................................GGTCCGGCATTAGGGTAGTTTTT......................................................................................................................................................................................... 23 0 11 0.09 1 1 0 0 0 0 0 0
....................................................................................................AGTTTCGGTTGATTGTTGC.................................................................................................................................... 19 0 12 0.08 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................ACGGTTTTGCAACGCTAGGACAATGAC............................... 27 0 12 0.08 1 1 0 0 0 0 0 0
.............................................CCCGGCATTAGGGTAGTTT........................................................................................................................................................................................... 19 1 14 0.07 1 0 0 1 0 0 0 0
................................................................................................................................................................................................................................TTTCCCTATAGGGTGGTTTATAAT... 24 3 15 0.07 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................CCTATGGGTTGGCCTATTATT.. 21 3 15 0.07 1 0 0 0 0 0 1 0
............................................................................................................................................................................................................ACGCTAGGACAATGACCATTATTCCCT.................... 27 0 16 0.06 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................TGCAATGCTAGGACAATGACCATTATT........................ 27 1 16 0.06 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................TTTGCAACGCTAGGACAATGACCATTAT......................... 28 0 17 0.06 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................................CAACGCTAGGACAATGACCATTATT........................ 25 0 17 0.06 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................GCAACGCTAGGCCAATGACCATTAT......................... 25 1 17 0.06 1 0 1 0 0 0 0 0
......................................................................................................................................................................................................TTTGCAACGCTAGGACAATGACCAT............................ 25 0 17 0.06 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................TAGGACAATGACCATTATTCCCTAT.................. 25 0 17 0.06 1 1 0 0 0 0 0 0
......................................................................................................................................TTAATTCCTCAGGACCTCGTTTT.............................................................................................. 23 0 17 0.06 1 0 0 1 0 0 0 0
.......................................................................................................................................................................................................TTGCAACGCTAGGACAATGGCCATTATT........................ 28 1 17 0.06 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................AGGTACGGTTTTGCAACGC........................................... 19 0 17 0.06 1 0 0 0 0 0 0 1
.........................................................................................................................................................................................................GCAACGCTAGGACAATGGCCATTATT........................ 26 1 17 0.06 1 1 0 0 0 0 0 0
.....................................................................................................................................................................TTTGCCACGGTCCTGGACCAAC................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2L:20667536-20667786 + dya_395 CCAAAATA-AATCTGTTTCTGTTTTGGATTGGCCTGCA-CAGTCCCCAGGCCGTAATCCCATCAAAAATTCTTGGTCAGATATG------------AGAAAAGCAGTTGTACC-TTCAAAGCCAACTAAC-AACGAATA-ACTTTG-GG-T------------ATAA-TTAAGGAGTCCTGGAGCAAAATATCATTAAAACGGTGCCAGGACCTGGTTGA-TTCCATGCCAAAACGTTGCGATCCTGTTACTGGTAATAAGGGATACCCAACCAAAT-ATTAA---AT-
droEre2 scaffold_4512:111220-111471 + CAAAGAAA-AATCTGTTCCTGTTTTGGAGTGGCCTGCC-CAGTCCCCAGACCTAAATCCAAACGTAAATCTTTGATCGGATATT------------AAAAACGCAGTTCTAGC-TTCTAAGCCAACTAAC-AACGAACAGGCTTTG-GGCT------------ATGA-CTAAGGAGTCCTGGAGCAAAATATCCCTAAAATGCTGCCAGGACCTGGTTGA-CTATATGCGAAAACTTT--GCAGCTGTTATTGCTAATAAGGGATAGACTAAAAAAATATTAA---AT-
droSec2 scaffold_4680:1642-1905 + TGAGCAGA-AATCGATCCGAGTAATGAATTGGCCTGCT-CAGTCACCCGACTTGAATCCAATCGAAAAACTTTGTGCGGACGTA------------AAAAAA-AGGTTTCTGA-AGCCAAACCCAACAAT-AACGAGGA-ACTTTG-GATTCACGGGAGATCGAGGA-TCAAGGATTCATGGAGCAAAATTCCTCAAAAACGGTACCAGGACTTGGTGGA-CTCCATGCCAAGAGGATGCGCAGCTGTCATTGCCTAAAATGGTCACCCAACCAAAT-ATTAAG--AT-
droSim2 2r:4817701-4817922 - CCGAAATA-AATCTATTTATGTTTTGGGGTGGCCTGCACCAGTCGACAAACTGTAATCCCATCGAAAAACTGTGGTCGGATATT------------AAAAAGGATGTTGTAGC-TTCTAAGCCATCTAAA-AAAGAAAA-CCATTG-GGCT------------GTAA-TTAAGGAATTC----------------------GGTGCCC-GATCTGGTTGA-CTCCATCCCAAAACGTTGCACACCT---------ACTAAGGGATGCACTACCAAAT-ATAAAT--AT-
dm3 chr2R:4001074-4001303 - CGAAAATA-AATCTATTCCTGTTTTGGAGTGGCCTGCA-CAGTCGCCAGACTTTAATCCCATCGAAAATCTCTGTCCGGATATC------------AAAAAGGTTGTTGTAGC-TTCTAAGTC---------------------------T------------GTAA-TTAAGGAGTTCTGGAGTAAAATATCCCCAAAACAGTGCCAGGACCTGGTTGA-CTCCATGCCAAAGCGTTGCGCACCTATTATTGCTAATAAGGGATGGACTACCAAAT-ATATAC--ATA
droEug1 scf7180000407330:8035-8249 - C--------------------------------CTTCT-CAATCACCAGACCTTAATCCCATTGAGCATTTGTGGGAAGAGCTGGCCAGGCGCGTTAAAAAACG--------------------CGCAAT-AAAAACAA-AAGCTG-AGCTGAAGGTGGCTCTAATA-GAAGAGAATATTGGGGCA-----------GAAACAACCCAAAATTTCGTTTC-TTCGATGCCAAGACGGTTGGAAGCCTTTATAAAACAAAATGGCTTACCCACAAAGT-ATTGA---TT-
droBia1 scf7180000302155:2530949-2531199 - CGCTGCCA-ACCCAGTAAACGTCATGGAGTGGCCCGCG-CAGTCACCCGATCTCCATCCTATTGAGGATTTGTGGTGTGACGTC------------AAAAGAGCAATCTTAGA-AATCAAACCTAGCAAC-AACTTTCA-ACTTTG-GGAA------------GCTG-TGCATAGGACTTAGATCTCTATTCTTATAGAGAGATGCCAAAACCTGGTTGA-TTACATGCATAAGTGTTGTGCAGCTGTTATCGCAAACAAAGGATACGCAACAAAAT-ATTAA---A--
droTak1 scf7180000415764:193918-194169 + CGCAGCCA-ATGAAGTCGATGTCATGGAGTGGCCCGCA-CAGTCACCCGATCTCAATCCAATTGAGAATTTGTGGTGTGACGTG------------AAAAGAGCAGTCTCGGA-ATTAAAACCAAGCAAT-AACTTTCA-ACTTTG-GGAA------------GCTG-TACAAAGATCTTGGAGCTCTATTCCTCTAGAGAGATGCCAAAATTTAGTTAA-TTCCATGCATAAGCGCTGTGCGTCTGTTATTGCAAACAAAGGATATGCCACCAAAT-ACTAA---AA-
droEle1 scf7180000488757:402-649 + TCAAGACA-GATCCCCTCACCTAATGGATTGGCCTGCT-CAGTCTCCAGATTTAAACCCGATAGGGACTCTTTGGTCTGATGTA------------AAAAAATATGTTATCAA-TGC-AAACCAAGGAAT-AATCAGAA-GCTCTG-GGCT------------ACCA-TTCAAGAATCATGGAGCAGTATTCCAC-GGGAAGGTGCCAACATTTGGTCAA-TTCTATGACGAGACGTTGTGCTGCTGTCATTGCTGCCAAAGGTTTAACAACCAAAT-ATTAA------
droRho1 scf7180000761431:6444-6695 + CGGAAGAA-ACTCTGACAATGTGTTGGTGTGGCCTGCG-CAGTCGCCTGACCTTAATCCAATAGAGAATCTGTGGTCCGATGTC------------AGGAAGGCAGTTGCTGC-ATCCAAGCCAACCACC-GTAAGATC-ACTTTG-GAAA------------GTAG-TGAAGGAGTCTTGGACCCATATTCCCACTAAACGGTGCCAGGACTTGGTTGA-CTCCATGACAAGACGTTGTGAGGCTGTTATTGCCAATAATGGATGCACAAATAAAA-ATTAA---AT-
droFic1 scf7180000452569:3301-3552 - TGGGGACA-ACTCTGTAAACGTTATGGAGTGGCCTCCG-CAGTCTCCAGACCTTAATCCTATAGAGAATTTGTGGTCGGACGTC------------AAGAAGGCAGTCTCTGC-ATCAAAACCAACATCG-ATCGGATC-CCTTTG-GGGA------------GTAA-TTAAGGAGTCCTGGACTCAAATTCCCGTAAAGCGATGCCAGGACCTTGTTGA-CTCCATGCCAAGACGCTGCGCAGCAGTTATTTCCAATAAAGGATACACGACAAAGT-ATTAA---AT-
droKik1 scf7180000302406:145995-146244 + TCAAGACA-GATCCCTTCACCTAATGGATTGGCCTGCT-CAGTCTCCAGACTTAAACCCGATCGAGAATCTTTGGTCTGATGTA------------AAAAAATATGTTTCCAA-TGCAAAACCAAGGAAT-AATCAGGA-GCTCTG-GGCC------------ACCA-TTCAAGAATCATGGAGCAGTATTCCACGGGAAAGGTGCCAAAATTTGGTCAA-TTCTATGCCGAGACGTTGTGCTGCTGTCATTGCTGCTAAAGGTTTTACAACGAAAT-ATTAA------
droAna3 scaffold_12966:258814-259066 + CCTCAACA-ATGCTGTACAAGTTTTGGAGTGGCCTGCG-CAGTCGCCGGATCTAAATCCAATTGAAAATCTGTGGTCCGACGTT------------AAGAAGGCAGTTGCTGA-TAGCAAACCAACGACT-ATCGATTG-CCTTTG-GGGT------------GTTA-TTAAGGAGTCCTGGACTAATATACCCAAAAAACGCTGCCAGGACTTAGTAGA-TTCAATGCCAAGACGTTGTGCAGCTGTTTTAGCCAACAAAGGATGCGCTACCAAAT-ACTAAC--AC-
droBip1 scf7180000396413:1341723-1341978 + AAAAGACA-GATCTCTCCATGTAATGGATTGGCCAGCT-CAGTCCCCAGACCTAAATCCTATAGAAAATTTGTGGTCTAATGTG------------AAAAAATTTGTTTCCAA-TTCAAAACTAAAAAAT-AATTAGGA-GCTTTG-GGCT------------TTCTTTCAAGGAGTCTCGGAGCAATATCCCCCTGGAAAGGTGCCAAAGATTGGTAAC-TTCAATGCCGAGACATTGTGAGGCTATCATTTCTGCCAAAAGCTTTACAACAAATT-ATTAATGCAT-
dp5 3:16635976-16636228 + CGAGCACA-ATTCTCTTAGTGCAATGGATTGGCCTGTT-CAGTCTCCAGACTTGAAACCCATTGCTAATATTTTGGGTCAAGTT------------AAAAAATATGTTTCTAA-TGCGGAATCAAAGAAC-AATAAATA-TGTTTG-GGGT------------ATCC-TGCATGGTTCGTGGATCAATATCCCAAGGAAAAGATGCGAAAATGAGGTGAGCTTTAATGCCAATATGTTGAGCTGCTGTTGTTGCTGACAAAGGCTTTGCAACAAAAT-GCCAA---CC-
droPer2 scaffold_4:3344142-3344394 - CGAGCACA-ATTCTCTTAGTGCAATGGATTGGCCTGTT-CAGTCTCCAGACTTGAAACCCATTGCTAATATTTTGGGTCAAGTT------------AAAAAATATGTTTCTAA-TGCGGAATCAAAGAAC-AATAAATA-TGTTTG-GGGT------------ATCC-TGCATGGTTCGTGGATCAATATCCCAAGGAAAAGATGCGAAAATTAGGTGAGCTTTAATGCCAATACGTTGAGCTGCTGTTGTTGCTGCCAAAGGTTTTACAACAAAAC-GCTAA---CG-
droWil2 scf2_1100000004963:229092-229343 + CTCGGAAA-ATTCTCTTAATGTAATGGAGTGGCCGGCA-CAGTCACCAGACCTAAACCCCATTGAAAATCTTTCGTCTGACATT------------AAAAAAGCTGTTGCTAT-TGCAAAACCAACCAAC-AATGAGGC-GCTTTG-GGAA------------GTAG-TCCAGGAGTCCTGGAACAAAATTCCGGTCAAACGCTGTCAAGACCTGGTTGA-CTCAATGCCAAGACGTTGTGCAGCGGTTATTGCCAATAAGGGCAATGCAACCAAGT-ATTAA---GT-
droVir3 scaffold_13036:934347-934599 - TCAGGGCAAACTCTGGCAACGTTTTGGAGTGGCCTACT-GAGTCGCCTGACCTGAATTCCATCGAAAATCTGTGGTCCGACGTC------------AAGAAGGCAGTTGCTGC-TTCCAAACCAACCACT-ATCGGATC-ACTTTG-GGAA------------GAAA-TTAAAGAGTCCTGGTTCAAAATTCCCCTAAAACGATGCCAGGACTCAGCTGA-TTCCATGCAAAGACGCTGTGCAGCTATTATTGCTAATAAAAGACACTGTACTAAAT-ATTAA---AT-
droMoj3 scaffold_6482:202534-202786 + GCAATATA-ATCAAATAGAGGTTTTAGATTGGCCAGCA-AATAGTCCAGATCTAAGCCCAATTGAAAATATTTGGTGGCTAATG------------AAAAAC-CAGCTTCGAAATGA-GCCACAACGGAATATTG-CTG-ACTCGAAAATC------------AAGT-TGCAAGAGATGTAGGACTCAATTTCTCAAGAGCATTGCAAAACTTTGTTAAA-ATCAATGCCAAAACGAGTTAAATGTGTAATTCAGGCCAAGGGCGACGTTACACAAT-TCTAAT--AT-
droGri2 scaffold_15203:914197-914448 - GAATACTA-ATATAGGCAAGGGGATGGGATGGCCGGCA-CAGTCTCCAAGTCTCAAACCGATTAAGAATTCGTGGTGCGAAATT------------ATAATGATTGTTTCTAA-CGTAAAGCAAGCGTTA-TATTTCCA-GCCTTG-GGAG------------ACTT-TGAAGAGGCCTTGGAAACCAATTTCTGTAGAAAAAGCCCAACATTTGGTGGA-CCCTGTGCACCATCGCCATATGACGGGAATTTTTAGTGAGGGTTATTCAACCAAAT-ATGTA---GT-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CCAAAATA-AATCTGTTTCTGTTTTGGATTGGCCTGCA-CAGTCCCCAGGCCGTAATCCCATCAAAAATTCTTGGTCAGATATG------------AGAAAAGCAGTTGTACC-TTCAAAGCCAACTAAC-AACGAATA-ACTTTG-GG-T------------ATAA-TTAAGGAGTCCTGGAGCAAAATATCATTAAAACGGTGCCAGGACCTGGTTGA-TTCCATGCCAAAACGTTGCGATCCTGTTACTGGTAATAAGGGATACCCAACCAAAT-ATTAA---AT-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........ATCTGTTTCTGTTTTGGATT...................................................................................................................................................................................................................................................................2011.00110000000000
........................................................TCCCATCAAAAATTCTTGGTCAGA.................................................................................................................................................................................................................2490.11101000000000
........................................................TCCCATCAAAAATTCTTGGTCAGATA...............................................................................................................................................................................................................2690.11101000000000
..........................................................................GTCAGATATG------------AGAAAAGCAGTTGT...................................................................................................................................................................................2490.11101000000000
.........................................................................................................................................................................................................................................................ACTGGTAATAAGGGATACCCA...................21180.11202000000000
................................................................AAAATTCTTGGTCAGATATG------------AG...............................................................................................................................................................................................2290.11100000010000
........................TGGATTGGCCTGCA-CAGTCCCCAGGCCG............................................................................................................................................................................................................................................28100.10101000000000
..........................................................................................................................CAACTAAC-AACGAATA-ACTTTG-G.............................................................................................................................................23110.09101000000000
.............................................................................................................................CTAAC-AACGAATA-ACTTTG-GG-T------------AT............................................................................................................................24110.09101000000000
.............................................................................................................................CTAAC-AACGAATA-ACTTTG-GG-T------------..............................................................................................................................22120.08101000000000
..............................................................................................................................................................................................................................TCCATGCCAAAACGTTGCGATCC............................................23120.08110000000000
.........................................................................................................................................................................................................................................................ACTGGTAATAAGGGATACCCAAC.................23180.06101000000000
..........................................................................................................................................................................................................................................................CTGGTAATAAGGGATACCCAAC.................22180.06101000000000
......................................................................................................................................................................A-TTAAGGAGTCCTGGAGCAAA.....................................................................................................21200.05100000010000
droEre2
CAAAGAAA-AATCTGTTCCTGTTTTGGAGTGGCCTGCC-CAGTCCCCAGACCTAAATCCAAACGTAAATCTTTGATCGGATATT------------AAAAACGCAGTTCTAGC-TTCTAAGCCAACTAAC-AACGAACAGGCTTTG-GGCT------------ATGA-CTAAGGAGTCCTGGAGCAAAATATCCCTAAAATGCTGCCAGGACCTGGTTGA-CTATATGCGAAAACTTT--GCAGCTGTTATTGCTAATAAGGGATAGACTAAAAAAATATTAA---AT-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droSec2
TGAGCAGA-AATCGATCCGAGTAATGAATTGGCCTGCT-CAGTCACCCGACTTGAATCCAATCGAAAAACTTTGTGCGGACGTA------------AAAAAA-AGGTTTCTGA-AGCCAAACCCAACAAT-AACGAGGA-ACTTTG-GATTCACGGGAGATCGAGGA-TCAAGGATTCATGGAGCAAAATTCCTCAAAAACGGTACCAGGACTTGGTGGA-CTCCATGCCAAGAGGATGCGCAGCTGTCATTGCCTAAAATGGTCACCCAACCAAAT-ATTAAG--AT-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................ATGAATTGGCCTGCT-CAGT......................................................................................................................................................................................................................................................1950.2010010
...........................................................AATCGAAAAACTTTGTGCGGAC................................................................................................................................................................................................................22200.0510100
....................................................................................................................................................................................................................................CCAAGAGGATGCGCAGCTGTCA.......................................22200.0510001
droSim2
CCGAAATA-AATCTATTTATGTTTTGGGGTGGCCTGCACCAGTCGACAAACTGTAATCCCATCGAAAAACTGTGGTCGGATATT------------AAAAAGGATGTTGTAGC-TTCTAAGCCATCTAAA-AAAGAAAA-CCATTG-GGCT------------GTAA-TTAAGGAATTC----------------------GGTGCCC-GATCTGGTTGA-CTCCATCCCAAAACGTTGCACACCT---------ACTAAGGGATGCACTACCAAAT-ATAAAT--AT-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................CT------------GTAA-TTAAGGAATTC----------------------G.......................................................................................1812.00200002000000000000
...............................................................................................................................AAA-AAAGAAAA-CCATTG-GGC...........................................................................................................................................2011.00110000000000000000
dm3
CGAAAATA-AATCTATTCCTGTTTTGGAGTGGCCTGCA-CAGTCGCCAGACTTTAATCCCATCGAAAATCTCTGTCCGGATATC------------AAAAAGGTTGTTGTAGC-TTCTAAGTC---------------------------T------------GTAA-TTAAGGAGTTCTGGAGTAAAATATCCCCAAAACAGTGCCAGGACCTGGTTGA-CTCCATGCCAAAGCGTTGCGCACCTATTATTGCTAATAAGGGATGGACTACCAAAT-ATATAC--ATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................AAGGTTGTTGTAGC-TTCTAAG........................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000
...............TTCCTGTTTTGGAGTGGCCTG.............................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................TGTTTTGGAGTGGCCTGCA-C.........................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TTATTGCTAATAAGGGATGG......................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................TTGGAGTGGCCTGCA-CAGTCG....................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................CTGTCCGGATATC------------AAAAAGGT.........................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000
...................TGTTTTGGAGTGGCCTGCA-CAA.......................................................................................................................................................................................................................................................2211.0010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCCTGTTTTGGAGTGGCCTGCA-..........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AGTC---------------------------T------------GTAA-TTAAGGAGTTCTGGAG.........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TTCTAAGTC---------------------------T------------GTAA-TTAAGGA..................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................................................................................ATATCCCCAAAACAGTGCCAG................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................TAATAAGGGATGGACTACCAA..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TTGTTGTAGC-TTCTAAGTC---------------------------T------------GT............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................AAGGGATGGACTACCAAAT-AT.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................AGC-TTCTAAGTC---------------------------T------------GTAA-TTAAGG...................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TTGCTAATAAGGGATGGACTA..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TTATTGCTAATAAGGGATGGA.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................TGTAGC-TTCTAAGTC---------------------------T------------GTAA-T........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CTGGTTGA-CTCCATGCCAAAGCG.....................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TCTAAGTC---------------------------T------------GTAA-TTAAGGAG.................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................................CGGATATC------------AAAAAGGTTGTTG....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................ATTGCTAATAAGGGATGGACT...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................................................................................TTGA-CTCCATGCCAAAGCGTT...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................AAGTC---------------------------T------------GTAA-TTAAGGAGTTC..............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TAA-TTAAGGAGTTCTGGAGTA.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TTGA-CTCCATGCCAAAGCGTTGCG................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................ATTGCTAATAAGGGATGG......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................................................................TTATTGCTAATAAGGGATG.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TC---------------------------T------------GTAA-TTAAGGAGTTCTGG...........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................CCATGCCAAAGCGTTGCGCAC.............................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................CCAGGACCTGGTTGA-CTCC................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTTTGGAGTGGCCTGCA-CAG.......................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
......................................................................................................................................................T------------GTAA-TTAAGGAGTTCTGGAG.........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................CGAAAATCTCTGTCCGGATAT..............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TAATCCCATCGAAAATCTCTG.......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................A-TTAAGGAGTTCTGGAGT........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................TTTTGGAGTGGCCTGCA-CAGT......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
C--------------------------------CTTCT-CAATCACCAGACCTTAATCCCATTGAGCATTTGTGGGAAGAGCTGGCCAGGCGCGTTAAAAAACG--------------------CGCAAT-AAAAACAA-AAGCTG-AGCTGAAGGTGGCTCTAATA-GAAGAGAATATTGGGGCA-----------GAAACAACCCAAAATTTCGTTTC-TTCGATGCCAAGACGGTTGGAAGCCTTTATAAAACAAAATGGCTTACCCACAAAGT-ATTGA---TT-SizeHit CountTotal NormTotal
No Reads
droBia1
CGCTGCCA-ACCCAGTAAACGTCATGGAGTGGCCCGCG-CAGTCACCCGATCTCCATCCTATTGAGGATTTGTGGTGTGACGTC------------AAAAGAGCAATCTTAGA-AATCAAACCTAGCAAC-AACTTTCA-ACTTTG-GGAA------------GCTG-TGCATAGGACTTAGATCTCTATTCTTATAGAGAGATGCCAAAACCTGGTTGA-TTACATGCATAAGTGTTGTGCAGCTGTTATCGCAAACAAAGGATACGCAACAAAAT-ATTAA---A--SizeHit CountTotal NormTotal
No Reads
droTak1
CGCAGCCA-ATGAAGTCGATGTCATGGAGTGGCCCGCA-CAGTCACCCGATCTCAATCCAATTGAGAATTTGTGGTGTGACGTG------------AAAAGAGCAGTCTCGGA-ATTAAAACCAAGCAAT-AACTTTCA-ACTTTG-GGAA------------GCTG-TACAAAGATCTTGGAGCTCTATTCCTCTAGAGAGATGCCAAAATTTAGTTAA-TTCCATGCATAAGCGCTGTGCGTCTGTTATTGCAAACAAAGGATATGCCACCAAAT-ACTAA---AA-SizeHit CountTotal NormTotal
No Reads
droEle1
TCAAGACA-GATCCCCTCACCTAATGGATTGGCCTGCT-CAGTCTCCAGATTTAAACCCGATAGGGACTCTTTGGTCTGATGTA------------AAAAAATATGTTATCAA-TGC-AAACCAAGGAAT-AATCAGAA-GCTCTG-GGCT------------ACCA-TTCAAGAATCATGGAGCAGTATTCCAC-GGGAAGGTGCCAACATTTGGTCAA-TTCTATGACGAGACGTTGTGCTGCTGTCATTGCTGCCAAAGGTTTAACAACCAAAT-ATTAA------SizeHit CountTotal NormTotal
No Reads
droRho1
CGGAAGAA-ACTCTGACAATGTGTTGGTGTGGCCTGCG-CAGTCGCCTGACCTTAATCCAATAGAGAATCTGTGGTCCGATGTC------------AGGAAGGCAGTTGCTGC-ATCCAAGCCAACCACC-GTAAGATC-ACTTTG-GAAA------------GTAG-TGAAGGAGTCTTGGACCCATATTCCCACTAAACGGTGCCAGGACTTGGTTGA-CTCCATGACAAGACGTTGTGAGGCTGTTATTGCCAATAATGGATGCACAAATAAAA-ATTAA---AT-SizeHit CountTotal NormTotal
No Reads
droFic1
TGGGGACA-ACTCTGTAAACGTTATGGAGTGGCCTCCG-CAGTCTCCAGACCTTAATCCTATAGAGAATTTGTGGTCGGACGTC------------AAGAAGGCAGTCTCTGC-ATCAAAACCAACATCG-ATCGGATC-CCTTTG-GGGA------------GTAA-TTAAGGAGTCCTGGACTCAAATTCCCGTAAAGCGATGCCAGGACCTTGTTGA-CTCCATGCCAAGACGCTGCGCAGCAGTTATTTCCAATAAAGGATACACGACAAAGT-ATTAA---AT-SizeHit CountTotal NormTotal
No Reads
droKik1
TCAAGACA-GATCCCTTCACCTAATGGATTGGCCTGCT-CAGTCTCCAGACTTAAACCCGATCGAGAATCTTTGGTCTGATGTA------------AAAAAATATGTTTCCAA-TGCAAAACCAAGGAAT-AATCAGGA-GCTCTG-GGCC------------ACCA-TTCAAGAATCATGGAGCAGTATTCCACGGGAAAGGTGCCAAAATTTGGTCAA-TTCTATGCCGAGACGTTGTGCTGCTGTCATTGCTGCTAAAGGTTTTACAACGAAAT-ATTAA------SizeHit CountTotal NormTotal
No Reads
droAna3
CCTCAACA-ATGCTGTACAAGTTTTGGAGTGGCCTGCG-CAGTCGCCGGATCTAAATCCAATTGAAAATCTGTGGTCCGACGTT------------AAGAAGGCAGTTGCTGA-TAGCAAACCAACGACT-ATCGATTG-CCTTTG-GGGT------------GTTA-TTAAGGAGTCCTGGACTAATATACCCAAAAAACGCTGCCAGGACTTAGTAGA-TTCAATGCCAAGACGTTGTGCAGCTGTTTTAGCCAACAAAGGATGCGCTACCAAAT-ACTAAC--AC-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............TGTACAAGTTTTGGAGTGGCCTGC............................................................................................................................................................................................................................................................24171.18201370000
.............TGTACAAGTTTTGGAGTGGCCTG.............................................................................................................................................................................................................................................................23170.417610000
.............TGTACAAGTTTTGGAGTGGCCTGCG-C.........................................................................................................................................................................................................................................................26170.417610000
......................................................................................................................................................................................................................AGTAGA-TTCAATGCCAAGACGTTGT.................................................25180.397001060
............................................................................................................................................................................................ATACCCAAAAAACGCTGCCAGGACT............................................................................25190.377340000
.............TGTACAAGTTTTGGAGTGGCCTGCG-..........................................................................................................................................................................................................................................................25170.356600000
.....................................................................................................................................................GT------------GTTA-TTAAGGAGTCCTGGACT........................................................................................................23160.315401000
.....................................................................................................................................................GT------------GTTA-TTAAGGAGTCCTGGACTAATA....................................................................................................27160.315500000
.......................................................ATCCAATTGAAAATCTGTGGTCCGA.................................................................................................................................................................................................................25160.315500000
.......................................................................................................................................................................................................................GTAGA-TTCAATGCCAAGACGTTGT.................................................24180.285011021
.....................................................................................................................................................GT------------GTTA-TTAAGGAGTCCTGGAC.........................................................................................................22160.254220000
.....................................................................................................................................................GT------------GTTA-TTAAGGAGTCCTGGACTA.......................................................................................................24160.254300010
..............GTACAAGTTTTGGAGTGGCCTGC............................................................................................................................................................................................................................................................23170.244400000
...................................................................................T------------AAGAAGGCAGTTGCTGA-TAGCAAAC.......................................................................................................................................................................26170.244120010
..................................................................................................................TAGCAAACCAACGACT-ATCGATTG-CC...................................................................................................................................................26170.244130000
.......A-ATGCTGTACAAGTTTTGGAGTGGC................................................................................................................................................................................................................................................................25170.244010030
......................................................................................................................AAACCAACGACT-ATCGATTG-CCT..................................................................................................................................................23170.244130000
..................................................................................................................................................................................................................................TGCCAAGACGTTGTGCAGCTG..........................................21160.193300000
.......................................................................................................................................................................................................................GTAGA-TTCAATGCCAAGACGTTGTGC...............................................26160.193120000
...................................................................................................................................................................................................................................GCCAAGACGTTGTGCAGCTGT.........................................21160.193300000
...................................................................................................................................................................................................................................................GCTGTTTTAGCCAACAAAGGATGCGC....................26170.183030000
..................AAGTTTTGGAGTGGCCTGCG-CAG.......................................................................................................................................................................................................................................................23170.183300000
.............TGTACAAGTTTTGGAGTGGCCTGCG-CA........................................................................................................................................................................................................................................................27170.183210000
......................................................................................................................................................................................................................AGTAGA-TTCAATGCCAAGACGT....................................................22180.173030000
..............................................................................GACGTT------------AAGAAGGCAGTTGCTGA-...............................................................................................................................................................................23190.163200010
...........................................................................TCCGACGTT------------AAGAAGGCAGTTGCTGA-...............................................................................................................................................................................26190.163210000
......................................................................................................................................................T------------GTTA-TTAAGGAGTCCTGGA..........................................................................................................20160.132200000
...................................................................................................................................................................GTTA-TTAAGGAGTCCTGGACT........................................................................................................21160.132000002
..........................................................CAATTGAAAATCTGTGGTCCG..................................................................................................................................................................................................................21160.132200000
.......................................................ATCCAATTGAAAATCTGTGGTCCGAC................................................................................................................................................................................................................26160.132110000
.....................................................................................................................................................................................................................................CAAGACGTTGTGCAGCTGTTT.......................................21160.132200000
.................................................................................................................................T-ATCGATTG-CCTTTG-GGGT------------GT............................................................................................................................21160.132000110
.....................................................................................................................................................................................GACTAATATACCCAAAAAACGCTGC...................................................................................25170.122020000
.................CAAGTTTTGGAGTGGCCTGCG-..........................................................................................................................................................................................................................................................21170.122200000
.......................................................................................................................AACCAACGACT-ATCGATTG-CCTTTG-..............................................................................................................................................25170.122200000
.............TGTACAAGTTTTGGAGTGGCCTGCG-CAG.......................................................................................................................................................................................................................................................28170.122200000
...................................................................................................................AGCAAACCAACGACT-ATCGATTG-CC...................................................................................................................................................25170.122020000
...........................................................................................................................AACGACT-ATCGATTG-CCTTTG-GG............................................................................................................................................23170.122200000
...................................................................................T------------AAGAAGGCAGTTGCTGA-TAGCAAACC......................................................................................................................................................................27170.122020000
................ACAAGTTTTGGAGTGGCCTGC............................................................................................................................................................................................................................................................21170.122200000
........................................................................................................................................................................................................................................................TTTAGCCAACAAAGGATGCGCTACC................25170.122020000
..............GTACAAGTTTTGGAGTGGCCTG.............................................................................................................................................................................................................................................................22170.122100010
...............................................................................ACGTT------------AAGAAGGCAGTTGCTGA-TAGC...........................................................................................................................................................................26170.122200000
...................................................................................................................AGCAAACCAACGACT-ATCGATTG-.....................................................................................................................................................23170.122200000
................ACAAGTTTTGGAGTGGCCTGCG-..........................................................................................................................................................................................................................................................22170.122200000
..................AAGTTTTGGAGTGGCCTGCG-C.........................................................................................................................................................................................................................................................21170.122020000
......................................................................................................................AAACCAACGACT-ATCGATTG-CCC..................................................................................................................................................23170.122020000
........................TGGAGTGGCCTGCG-CAGTCGCCGG................................................................................................................................................................................................................................................24170.122200000
.....................................................................................................................................................................................................................TAGTAGA-TTCAATGCCAAGACGTTGT.................................................26180.112000020
..................................................................................................................................................................................................AAAAAACGCTGCCAGGACTTA..........................................................................21180.112200000
......................................................................................................................................................................................................................AGTAGA-TTCAATGCCAAGACGTT...................................................23180.112100001
....................................................................TCTGTGGTCCGACGTT------------AAGAAGGCA........................................................................................................................................................................................25190.112200000
............................................................................................................................................................................................ATACCCAAAAAACGCTGCCAGG...............................................................................22190.112110000
.....................................................................CTGTGGTCCGACGTT------------AAGAAG...........................................................................................................................................................................................21190.112100001
....................................................................TCTGTGGTCCGACGTT------------AAGAAGG..........................................................................................................................................................................................23190.112200000
...........................................................................................................................................................................................TATACCCAAAAAACGCTGCCAGGACT............................................................................26190.112200000
...........................................................................TCCGACGTT------------AAGAAGGCAGTTGC...................................................................................................................................................................................23190.112010010
...........................................................................................................................................................................................................................................GTTGTGCAGCTGTTTTAGCCA.................................21150.071100000
.....................................................................................................................................................GT------------GTTA-TTAAGGAGTCCTGGACTAA......................................................................................................25160.061100000
.........................................................................................................................................................................TAAGGAGTCCTGGACTAATATACC................................................................................................24160.061010000
.......................................................ATCCAATTGAAAATCTGTGGTCCGACGT..............................................................................................................................................................................................................28160.061010000
..........................................................................................................................................................................................................................GA-TTCAATGCCAAGACGTTGTGCA..............................................24160.061100000
...................................................................................................................................................GGGT------------GTTA-TTAAGGAGTCCTG............................................................................................................21160.061100000
...................................................................................................................................ATCGATTG-CCTTTG-GGGT------------GT............................................................................................................................20160.061000100
.........................................................................................................................................................................TAAGGAGTCCTGGACTAATATACCC...............................................................................................25160.061010000
.......................................................................................................................................................................................................................GTAGA-TTCAATGCCAAGACGTTGTGCA..............................................27160.061100000
........................................................................................................................................................................................................................TAGA-TTCAATGCCAAGACGTTGTGCA..............................................26160.061100000
......................................................................................................................................................T------------GTTA-TTAAGGAGTCCTGGAC.........................................................................................................21160.061100000
........................................................................................................................................................................................................................TAGA-TTCAATGCCAAGACGTTGTGCAGC............................................28160.061100000
..............................................................................................................................................................................................................................TCAATGCCAAGACGTTGTGCA..............................................21160.061100000
...........................................................................................................................AACGACT-ATCGATTG-CCTTTG-GGGT------------GT............................................................................................................................27160.061000001
.........................................................................................................................................TG-CCTTTG-GGGT------------GTTA-TTAAGGAGTCC..............................................................................................................27160.061010000
.....................................................................................................................................................GT------------GTTA-TTAAGGAGTCCTGGACTAAT.....................................................................................................26160.061100000
....................................................................................................................................................GGT------------GTTA-TTAAGGAGTCCTGGAC.........................................................................................................23160.061100000
.....................................................................................................................................................................................................................TAGTAGA-TTCAATGCCAAGACGTTGTGC...............................................28160.061001000
.............................................................................................................................................................................................................................TTCAATGCCAAGACGTTGTGC...............................................21160.061000010
..........................................................................................................................CAACGACT-ATCGATTG-CCTTTG-GGGT------------GT............................................................................................................................28160.061100000
..........................................................................................................................................................................................................................GA-TTCAATGCCAAGACGTTGTGCAGC............................................26160.061100000
.......................................................ATCCAATTGAAAATCTGTGGTCC...................................................................................................................................................................................................................23160.061100000
.....................................................................................................................................................GT------------GTTA-TTAAGGAGTCCTGGA..........................................................................................................21160.061100000
..................................................TCTAAATCCAATTGAAAATCTGTGGTCC...................................................................................................................................................................................................................28160.061010000
..............................................................................................................................................TTTG-GGGT------------GTTA-TTAAGGAGTCCTGG...........................................................................................................26160.061001000
.........................................................................................................................................................................................................................AGA-TTCAATGCCAAGACGTTGTGCAGC............................................27160.061000010
...................................................................................................................................................GGGT------------GTTA-TTAAGGAGTCCTGG...........................................................................................................22160.061100000
...........................................................AATTGAAAATCTGTGGTCCGACGTT------------.................................................................................................................................................................................................25160.061100000
.......................................................ATCCAATTGAAAATCTGTGGT.....................................................................................................................................................................................................................21160.061010000
.....................................................................................................................................................GT------------GTTA-TTAAGGAGTCCTGG...........................................................................................................20160.061100000
...............................................................................................................................................................................................................................................TGCAGCTGTTTTAGCCAACAAAGGATGC......................28160.061100000
..............................................................TGAAAATCTGTGGTCCGACGT..............................................................................................................................................................................................................21160.061100000
...................................................................................................................................ATCGATTG-CCTTTG-GGGT------------GTT...........................................................................................................................21160.061100000
................................................................................................................................................TG-GGGT------------GTTA-TTAAGGAGTCCT.............................................................................................................22160.061100000
.......................................................ATCCAATTGAAAATCTGTGGTC....................................................................................................................................................................................................................22160.061000001
.........................................................CCAATTGAAAATCTGTGGTCCGACGTT------------.................................................................................................................................................................................................27160.061100000
.................................................................................................................................................................................................................................ATGCCAAGACGTTGTGCAGCT...........................................21160.061000010
............................................................ATTGAAAATCTGTGGTCCGACG...............................................................................................................................................................................................................22160.061100000
....................................................................................................................................................................TTA-TTAAGGAGTCCTGGACTAATA....................................................................................................24160.061100000
..............................................................................................................................GACT-ATCGATTG-CCTTTG-GGGT------------GT............................................................................................................................24160.061100000
....................................................................................................................................................................TTA-TTAAGGAGTCCTGGACT........................................................................................................20160.061100000
....................................................................................................................................TCGATTG-CCTTTG-GGGT------------GTTA-TTAAGA...................................................................................................................27160.061100000
....................................................TAAATCCAATTGAAAATCTGTGGTCC...................................................................................................................................................................................................................26160.061010000
..................AAGTTTTGGAGTGGCCTGCG-..........................................................................................................................................................................................................................................................20170.061100000
......CA-ATGCTGTACAAGTTTTGGAGTGGC................................................................................................................................................................................................................................................................26170.061000010
................................................................................................................................................TG-GGGT------------GTTA-TTAAGGAGTCC..............................................................................................................21170.061000100
....AACA-ATGCTGTACAAGTTTTGGAGTGGCC...............................................................................................................................................................................................................................................................29170.061100000
................................................................................................................A-TAGCAAACCAACGACT-ATCG..........................................................................................................................................................21170.061100000
.....................TTTTGGAGTGGCCTGCG-CAGT......................................................................................................................................................................................................................................................21170.061100000
.......................................................................................................................AACCAACGACT-ATCGATTG-CCT..................................................................................................................................................22170.061100000
................................................................AAAATCTGTGGTCCGACGTT------------AAGAAGG..........................................................................................................................................................................................27170.061100000
......................................................................................................................AAACCAACGACT-ATCGATTG-CCTTTG-GG............................................................................................................................................28170.061100000
.....................TTTTGGAGTGGCCTGCG-CAGTCG....................................................................................................................................................................................................................................................23170.061100000
.......................................................................................................................AACCAACGACT-ATCGATTG-CCTTT................................................................................................................................................24170.061100000
......................................................................................................................AAACCAACGACT-ATCGATTG-CCTTTG-..............................................................................................................................................26170.061100000
.CTCAACA-ATGCTGTACAAGTT..........................................................................................................................................................................................................................................................................21170.061010000
.............TGTACAAGTTTTGGAGTGGC................................................................................................................................................................................................................................................................20170.061100000
..................................................................................................................TAGCAAACCAACGACT-ATCGA.........................................................................................................................................................21170.061100000
..................................................................................TT------------AAGAAGGCAGTTGCTGA-TAGCAAAC.......................................................................................................................................................................27170.061010000
.........ATGCTGTACAAGTTTTGGAGT...................................................................................................................................................................................................................................................................21170.061100000
...................AGTTTTGGAGTGGCCTGCG-CA........................................................................................................................................................................................................................................................21170.061100000
...........................................................................................................................AACGACT-ATCGATTG-CCTTTG-..............................................................................................................................................21170.061100000
.........................................................................................................................CCAACGACT-ATCGATTG-CCTTTG-..............................................................................................................................................23170.061100000
..........TGCTGTACAAGTTTTGGAGTGGCCTG.............................................................................................................................................................................................................................................................26170.061100000
............CTGTACAAGTTTTGGAGTGGCCTGC............................................................................................................................................................................................................................................................25170.061100000
......................................................................................................................AAACCAACGACT-ATCGATTG-CCTTTT-..............................................................................................................................................26170.061100000
..............GTACAAGTTTTGGAGTGGCCT..............................................................................................................................................................................................................................................................21170.061010000
.............TGTACAAGTTTTGGAGTGGCCT..............................................................................................................................................................................................................................................................22170.061000010
................................................................................CGTT------------AAGAAGGCAGTTGCTGA-TAGC...........................................................................................................................................................................25170.061100000
.........ATGCTGTACAAGTTTTGGAG....................................................................................................................................................................................................................................................................20170.061100000
..........................................................................................................TTGCTGA-TAGCAAACCAACGA.................................................................................................................................................................21170.061100000
........................TGGAGTGGCCTGCG-CAGTCGCCG.................................................................................................................................................................................................................................................23170.061100000
..................AAGTTTTGGAGTGGCCTGCG-CAGT......................................................................................................................................................................................................................................................24170.061000010
...............TACAAGTTTTGGAGTGGCCTGCG-CAG.......................................................................................................................................................................................................................................................26170.061100000
........................TGGAGTGGCCTGCG-CAGTCGC...................................................................................................................................................................................................................................................21170.061100000
.........................................................................................................................CCAACGACT-ATCGATTG-CCTTTG-GGG...........................................................................................................................................26170.061100000
.................................................................................................AGAAGGCAGTTGCTGA-TAGCA..........................................................................................................................................................................21170.061100000
.......................TTGGAGTGGCCTGCG-CAGTCGCCGG................................................................................................................................................................................................................................................25170.061100000
..............GTACAAGTTTTGGAGTGGC................................................................................................................................................................................................................................................................19170.061000010
................................................................................................................................................................................TCCTGGACTAATATACCCAAAAAACG.......................................................................................26170.061010000
........................................................................................................................ACCAACGACT-ATCGATTG-CCTTTG-..............................................................................................................................................24170.061100000
..................AAGTTTTGGAGTGGCCTG.............................................................................................................................................................................................................................................................18170.061100000
.........................................................................................................................CCAACGACT-ATCGATTG-CCTTTG-G.............................................................................................................................................24170.061100000
..................................................................................TT------------AAGAAGGCAGTTGCTGA-TAGC...........................................................................................................................................................................23170.061100000
..........TGCTGTACAAGTTTTGGAGTGGC................................................................................................................................................................................................................................................................23170.061000001
...................................................................................T------------AAGAAGGCAGTTGCTGA-TAGC...........................................................................................................................................................................22170.061100000
....................................................................................................................GCAAACCAACGACT-ATCGATTG-C....................................................................................................................................................23170.061010000
..........................................................................................................................CAACGACT-ATCGATTG-CCTTTG-GG............................................................................................................................................24170.061100000
...............................................................................................................................ACT-ATCGATTG-CCTTTG-GGGT------------..............................................................................................................................21170.061000100
.......................TTGGAGTGGCCTGCG-CAGTCG....................................................................................................................................................................................................................................................21170.061100000
.........................................................................................................................CCAACGACT-ATCGATTG-CCTTT................................................................................................................................................22170.061100000
...............TACAAGTTTTGGAGTGGCCTG.............................................................................................................................................................................................................................................................21170.061100000
.......A-ATGCTGTACAAGTTTTGGAGTG..................................................................................................................................................................................................................................................................23170.061100000
........................TGGAGTGGCCTGCG-CAGTCGCC..................................................................................................................................................................................................................................................22170.061100000
.....................................................................................................................................................................................................................................................TGTTTTAGCCAACAAAGGATGCGCT...................25170.061010000
....................GTTTTGGAGTGGCCTGCG-CAGTC.....................................................................................................................................................................................................................................................23170.061010000
..............................................................................................................................GACT-ATCGATTG-CCTTTG-GGGT------------..............................................................................................................................22170.061010000
..........................................TCGCCGGATCTAAATCCAATTGAAAA.............................................................................................................................................................................................................................26170.061100000
.................................................................AAATCTGTGGTCCGACGTT------------AAGAAGGC.........................................................................................................................................................................................27170.061100000
......................TTTGGAGTGGCCTGCG-CAGTC.....................................................................................................................................................................................................................................................21170.061100000
......................................................................................................................................................................................................................AGTAGA-TTCAATGCCAAGACGTTGTG................................................26180.061100000
.......................................................................................................................................................................................................................GTAGA-TTCAATGCCAAGACG.....................................................20180.061100000
......................................................................TGTGGTCCGACGTT------------AAGAAGGCAG.......................................................................................................................................................................................24180.061000001
......................................................................................................................................................................................................AACGCTGCCAGGACTTAGT........................................................................19180.061000001
..................................................................AATCTGTGGTCCGACGTT------------AAGAAGGCAG.......................................................................................................................................................................................28180.061100000
..................................................................................TT------------AAGAAGGCAGTTGCTGA-TA.............................................................................................................................................................................21180.061000010
...........................AGTGGCCTGCG-CAGTCGCCGG................................................................................................................................................................................................................................................21180.061100000
......................................................................................................................................................................................................AACGCTGCCAGGACTTAGTAGA-TT..................................................................24180.061100000
........................................................................................................................................................................................................................TAGA-TTCAATGCCAAGACGTTGT.................................................23180.061000010
..............................................................................................................................................................................................................CAGGACTTAGTAGA-TTCAATG.............................................................21180.061000001
....................................................................TCTGTGGTCCGACGTT------------AAGAAGGCAG.......................................................................................................................................................................................26180.061100000
............................................................................................................................................................................................ATACCCAAAAAACGCTGCCAGGACTTA..........................................................................27180.061010000
................................................................................................................................................................................................................GGACTTAGTAGA-TTCAATGCCAAGACG.....................................................27180.061100000
.................................................................................................................................................................................................................GACTTAGTAGA-TTCAATGCCAAGAC......................................................25180.061100000
...........................................................................................................................................................................................TATACCCAAAAAACGCTGCCAGGACTTAG.........................................................................29180.061100000
.............................................................................................................................................................................................TACCCAAAAAACGCTGCCAGGACTTAG.........................................................................27180.061100000
..............................................................................GACGTT------------AAGAAGGCAGTTGCTGA-T..............................................................................................................................................................................24180.061100000
.............................................................................................................................................................................................TACCCAAAAAACGCTGCCAGGACTTA..........................................................................26180.061100000
.....................................................................................................................................................................................................AAACGCTGCCAGGACTTAGTA.......................................................................21180.061100000
..................................................................................................................................................................................................................ACTTAGTAGA-TTCAATGCCAAGACG.....................................................25180.061100000
............................GTGGCCTGCG-CAGTCGCCGGA...............................................................................................................................................................................................................................................21180.061100000
..........................GAGTGGCCTGCG-CAGTCGC...................................................................................................................................................................................................................................................19180.061000001
.............................................................................................................................................................................................................CCAGGACTTAGTAGA-TTCAATGCCAAGAC......................................................29180.061100000
..........................................................................................................................................................................................................................GA-TTCAATGCCAAGACGTTGT.................................................21180.061000010
.....................................................................CTGTGGTCCGACGTT------------AAGAAGGCAGTTG....................................................................................................................................................................................28180.061100000
......................................................................................................................................................................................................................AGTAGA-TTCAATGCCAAGACGTTG..................................................24180.061000010
.......................................................................................................................................................................................................................GTAGA-TTCAATGCCAAGACGTTGTG................................................25180.061010000
.............................................................................................................................................................................................................CCAGGACTTAGTAGA-TTCAATGCCAA.........................................................26180.061100000
......................................................................................................................................................................................................AACGCTGCCAGGACTTAGTAG......................................................................21180.061100000
.....................................................................................................................................................................................................................TAGTAGA-TTCAATGCCAAGACGTT...................................................24180.061100000
....................................................................................................................................................................................................................TTAGTAGA-TTCAATGCCAAGACGT....................................................24180.061010000
...........................................................................................................................................................................................TATACCCAAAAAACGCTGCCAGGAC.............................................................................25190.051100000
.................................................................................................................................................................................................CAAAAAACGCTGCCAGGACT............................................................................20190.051100000
................................................................................................................................................................................................CCAAAAAACGCTGCCAGGT..............................................................................19190.051100000
.................................................................................GTT------------AAGAAGGCAGTTGCTGA-...............................................................................................................................................................................20190.051100000
..............................................................................................................................................................................................ACCCAAAAAACGCTGCCAGGA..............................................................................21190.051100000
..................................................................................................................................................................................................................................................AGCTGTTTTAGCCAACAAAGGATGCG.....................26190.051100000
............................................................................................................................................................................................ATACCCAAAAAACGCTGCCAG................................................................................21190.051100000
.............................................................................................................................................................................................TACCCAAAAAACGCTGCCAGGACT............................................................................24190.051100000
......................................................................TGTGGTCCGACGTT------------AAGAAG...........................................................................................................................................................................................20190.051000001
...........................................................................TCCGACGTT------------AAGAAGGCAGTTGCC..................................................................................................................................................................................24190.051010000
.....................................................................CTGTGGTCCGACGTT------------AAGAAGGCA........................................................................................................................................................................................24190.051100000
............................................................................................................................................................................................ATACCCAAAAAACGCTGCCA.................................................................................20190.051100000
..................................................................AATCTGTGGTCCGACGTT------------AAGAAGGC.........................................................................................................................................................................................26190.051100000
............................................................................................................................................................................................ATACCCAAAAAACGCTGCCAGGA..............................................................................23190.051100000
........................................................................................................................................................................................TAATATACCCAAAAAACGCTGCCAGG...............................................................................26190.051100000
............................................................................CCGACGTT------------AAGAAGGCAGTTG....................................................................................................................................................................................21190.051100000
...........................................................................................................................................................................................TATACCCAAAAAACGCTGCCAGG...............................................................................23190.051100000
...........................................................................................................................................................................................TATACCCAAAAAACGCTGCCA.................................................................................21190.051010000
....................................................................TCTGTGGTCCGACGTT------------AAGAAG...........................................................................................................................................................................................22190.051001000
...........................................................................................................................................................................................TATACCCAAAAAACGCTGCCAGGACC............................................................................26190.051010000
.................................CTGCG-CAGTCGCCGGATCTA...........................................................................................................................................................................................................................................20190.051100000
....................................................................TCTGTGGTCCGACGTT------------AAGAAGGC.........................................................................................................................................................................................24190.051100000
.................................................................................................................................................................................................CAAAAAACGCTGCCAGGACTTT..........................................................................22190.051100000
...............................................................................ACGTT------------AAGAAGGCAGTTGCTG.................................................................................................................................................................................21190.051100000
......................................................................TGTGGTCCGACGTT------------AAGAAGG..........................................................................................................................................................................................21190.051100000
...............................................................................ACGTT------------AAGAAGGCAGTTGC...................................................................................................................................................................................19200.051000001
droBip1
AAAAGACA-GATCTCTCCATGTAATGGATTGGCCAGCT-CAGTCCCCAGACCTAAATCCTATAGAAAATTTGTGGTCTAATGTG------------AAAAAATTTGTTTCCAA-TTCAAAACTAAAAAAT-AATTAGGA-GCTTTG-GGCT------------TTCTTTCAAGGAGTCTCGGAGCAATATCCCCCTGGAAAGGTGCCAAAGATTGGTAAC-TTCAATGCCGAGACATTGTGAGGCTATCATTTCTGCCAAAAGCTTTACAACAAATT-ATTAATGCAT-SizeHit CountTotal NormTotal
No Reads
dp5
CGAGCACA-ATTCTCTTAGTGCAATGGATTGGCCTGTT-CAGTCTCCAGACTTGAAACCCATTGCTAATATTTTGGGTCAAGTT------------AAAAAATATGTTTCTAA-TGCGGAATCAAAGAAC-AATAAATA-TGTTTG-GGGT------------ATCC-TGCATGGTTCGTGGATCAATATCCCAAGGAAAAGATGCGAAAATGAGGTGAGCTTTAATGCCAATATGTTGAGCTGCTGTTGTTGCTGACAAAGGCTTTGCAACAAAAT-GCCAA---CC-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................TGCGGAATCAAAGAAC-AATAAATA-TG...................................................................................................................................................2660.3320000000020
...............TTAGTGCAATGGATTGGCC...............................................................................................................................................................................................................................................................1960.1710100000000
..................................................................................................................TGCGGAATCAAAGAAC-AATAAATA-.....................................................................................................................................................2460.1710000000010
.....................................................................................................................................................................CC-TGCATGGTTCGTGGATCAA......................................................................................................2190.1110000001000
droPer2
CGAGCACA-ATTCTCTTAGTGCAATGGATTGGCCTGTT-CAGTCTCCAGACTTGAAACCCATTGCTAATATTTTGGGTCAAGTT------------AAAAAATATGTTTCTAA-TGCGGAATCAAAGAAC-AATAAATA-TGTTTG-GGGT------------ATCC-TGCATGGTTCGTGGATCAATATCCCAAGGAAAAGATGCGAAAATTAGGTGAGCTTTAATGCCAATACGTTGAGCTGCTGTTGTTGCTGCCAAAGGTTTTACAACAAAAC-GCTAA---CG-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................CTAA-TGCGGAATCAAAGAAC-..............................................................................................................................................................20140.142200000
...............................................................................................................AA-TGCGGAATCAAAGAAC-AAT...........................................................................................................................................................21100.101100000
...............................................................................................................................................TTG-GGGT------------ATCC-TGCATGGTTCGTGGATC........................................................................................................28120.081000001
......................................................................................................................................................................C-TGCATGGTTCGTGGATC........................................................................................................18200.051001000
droWil2
CTCGGAAA-ATTCTCTTAATGTAATGGAGTGGCCGGCA-CAGTCACCAGACCTAAACCCCATTGAAAATCTTTCGTCTGACATT------------AAAAAAGCTGTTGCTAT-TGCAAAACCAACCAAC-AATGAGGC-GCTTTG-GGAA------------GTAG-TCCAGGAGTCCTGGAACAAAATTCCGGTCAAACGCTGTCAAGACCTGGTTGA-CTCAATGCCAAGACGTTGTGCAGCGGTTATTGCCAATAAGGGCAATGCAACCAAGT-ATTAA---GT-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................TGCAGCGGTTATTGCCAATAAGGGCA........................2613.00300030
.............TCTTAATGTAATGGAGTGGCCGG.............................................................................................................................................................................................................................................................2323.00606000
.....................................................................................................................................................................................................................TGGTTGA-CTCAATGCCAAGACGTTG..................................................2532.67800080
........................................................................................................................................................................................................................................GACGTTGTGCAGCGGTTATTGCCAA................................2522.50504010
...............................................................................................................................................................................................................................................TGCAGCGGTTATTGCCAATAAGGGCAATG.....................2912.00200020
.............................................................................................................................................................................................................................................TGTGCAGCGGTTATTGCCAATAAGGG..........................2612.00201010
...................................................................................................................GCAAAACCAACCAAC-AATGAGGC-GCTT.................................................................................................................................................2721.50302100
.........................................................................................................................CCAACCAAC-AATGAGGC-GCTTTG-..............................................................................................................................................2321.50303000
...............................................................................................................................................TTG-GGAA------------GTAG-TCCAGGAGTCCTGGA..........................................................................................................2621.50300030
..................................................................................................................................................................................................................ACCTGGTTGA-CTCAATGCCAAGACGT....................................................2631.33403010
................................................................................................................................................................................................................................................GCAGCGGTTATTGCCAATAAGGG..........................2311.00101000
.............................................................................................................................................................................................................................................TGTGCAGCGGTTATTGCCAATAAGGGCA........................2811.00100010
...........................................................................TCTGACATT------------AAAAAAGCTGTTGCTAT-...............................................................................................................................................................................2621.00202000
......................................................................................................................................................................................................................GGTTGA-CTCAATGCCAAGACGTTGT.................................................2531.00302010
...........................................................................TCTGACATT------------AAAAAAGCTGT......................................................................................................................................................................................2021.00202000
..................................................................................................................TGCAAAACCAACCAAC-AATGAGGC-GCT..................................................................................................................................................2721.00202000
.....................................................................................................................................................................................................................................................GGTTATTGCCAATAAGGG..........................1811.00101000
...............................................................................................................................................................................................................................................TGCAGCGGTTATTGCCAATAAGGGC.........................2511.00100010
.................................................................................................................................................................................................................................................................TAAGGGCAATGCAACCAAGT-ATTAA---G..2611.00100010
...............................................................................................................................................TTG-GGAA------------GTAG-TCCAGGAGTCCTGGAAC........................................................................................................2821.00201100
........................................................................................................................................................................................................................................................TATTGCCAATAAGGGCAATGCAACCA...............2611.00101000
.............TCTTAATGTAATGGAGTGGCCGGC............................................................................................................................................................................................................................................................2421.00202000
.........................................................................................................................CCAACCAAC-AATGAGGC-GCTTTG-G.............................................................................................................................................2421.00202000
...........................................................................TCTGACATT------------AAAAAAGCTGTTG....................................................................................................................................................................................2221.00202000
.............................................................................................................................CCAAC-AATGAGGC-GCTTTG-GGAA------------GTAG-.........................................................................................................................2721.00201010
.............................................................................................................................................................................................................................................TGTGCAGCGGTTATTGCCAATAAG............................2411.00100010
..................................................................................................................................................................................................................ACCTGGTTGA-CTCAATGCCAAGACGTTG..................................................2831.00301110
................TAATGTAATGGAGTGGCCGGCA-CA........................................................................................................................................................................................................................................................2421.00201010
.......................................................................................................................................................................................................................GTTGA-CTCAATGCCAAGACGTTGTGC...............................................2621.00200020
.............................................................................................................................................................................................................................................TGTGCAGCGGTTATTGCCAATAAGGGCAA.......................2911.00100010
......................................................................................................................................................................................................AACGCTGTCAAGACCTGGTTGA-....................................................................2240.75312000
......................................................................................................................................................................................................AACGCTGTCAAGACCTGGTTGA-C...................................................................2340.75303000
......................................................................................................................................................................................................AACGCTGTCAAGACCTGGTTGA-CT..................................................................2440.75303000
......................................................................................................................................................................................................................GGTTGA-CTCAATGCCAAGACGTTG..................................................2430.67202000
............................................................................................................................................GCTTTG-GGAA------------GTAG-TCCAGGAG.................................................................................................................2220.50101000
......................................................................................................................................................................................................................GGTTGA-CTCAATGCCAAGACGTTGTGC...............................................2720.50101000
..................................................................................................................................................................................................................................TGCCAAGACGTTGTGCAGCGGTTAT......................................2520.50100010
...........................................................................................................TGCTAT-TGCAAAACCAACCAAC-AATGAGG.......................................................................................................................................................2920.50101000
..............................................................................................................TAT-TGCAAAACCAACCAAC-AATGAGGC-GC...................................................................................................................................................2920.50101000
........................................................................................................................ACCAACCAAC-AATGAGGC-GCTTTG-GGA...........................................................................................................................................2720.50101000
.............TCTTAATGTAATGGAGTGGCCGGCA-CAG.......................................................................................................................................................................................................................................................2820.50101000
..................................................................................................................TGCAAAACCAACCAAC-AATGAGGC-GC...................................................................................................................................................2620.50101000
.............TCTTAATGTAATGGAGTGGCCG..............................................................................................................................................................................................................................................................2220.50100100
...................................................................................................................GCAAAACCAACCAAC-AATGAGGC-GCT..................................................................................................................................................2620.50101000
...........................................................................TCTGACATT------------AAAAAAGCTGTTGCT..................................................................................................................................................................................2420.50110000
........................TGGAGTGGCCGGCA-CAGTCACCA.................................................................................................................................................................................................................................................2320.50101000
.............................................................................................................................CCAAC-AATGAGGC-GCTTTG-GGAA------------GTAG-T........................................................................................................................2820.50101000
................................................................................................................................................TG-GGAA------------GTAG-TCCAGGAGTCCTGG...........................................................................................................2420.50101000
........................................................................................................................................................................................................................................GACGTTGTGCAGCGGTTATTGCC..................................2320.50101000
..........................................................................................................................CAACCAAC-AATGAGGC-GCTTTG-G.............................................................................................................................................2320.50100010
...................................................................................................AAAGCTGTTGCTAT-TGCAAAACCA.....................................................................................................................................................................2420.50101000
...............................................................................................................................................TTG-GGAA------------GTAG-TCCAGGAGTCCTG............................................................................................................2420.50100010
......................................................................................................................AAACCAACCAAC-AATGAGGC-GCT..................................................................................................................................................2320.50101000
................................................................................................................................................TG-GGAA------------GTAG-TCCAGGAGTCCTGGA..........................................................................................................2520.50101000
......................................................................................................................AAACCAACCAAC-AATGAGGC-GCTT.................................................................................................................................................2420.50101000
.............................................................................................................................CCAAC-AATGAGGC-GCTTTG-GGAA------------G.............................................................................................................................2420.50100010
.............TCTTAATGTAATGGAGTGGCCGGCA-C.........................................................................................................................................................................................................................................................2620.50101000
............................................................................................................GCTAT-TGCAAAACCAACCAAC-AATGAGG.......................................................................................................................................................2820.50101000
..CGGAAA-ATTCTCTTAATGTAATGGAG....................................................................................................................................................................................................................................................................2620.50101000
...................................................................................T------------AAAAAAGCTGTTGCTAT-TGCAAAAC.......................................................................................................................................................................2620.50101000
...............................................................................................................................................TTG-GGAA------------GTAG-TCCAGGAGTCCTGGAAAT.......................................................................................................2920.50100100
...........................................................................................................................................................................................AATTCCGGTCAAACGCTGTCAAGACC............................................................................2620.50101000
.............................................CCAGACCTAAACCCCATTGAAAATCT..........................................................................................................................................................................................................................2620.50101000
..........................................................................................................................CAACCAAC-AATGAGGC-GCTTTG-GG............................................................................................................................................2420.50101000
.........................................................................................................................................................................................AAAATTCCGGTCAAACGCTGTCAAGAC.............................................................................2720.50101000
............................................................................................................GCTAT-TGCAAAACCAACCAAC-AA............................................................................................................................................................2320.50101000
....................................................................................................................................................................................................................................CCAAGACGTTGTGCAGCGGTTATTG....................................2520.50101000
...............................................................................................................................................TTG-GGAA------------GTAG-TCCAGGAGTCCTGGAACA.......................................................................................................2920.50100010
.........................................................................................................................CCAACCAAC-AATGAGGC-GCTTTG-GG............................................................................................................................................2520.50101000
.................................................................................................................................................G-GGAA------------GTAG-TCCAGGAGTCCTGG...........................................................................................................2320.50101000
................................................................................................................................................TG-GGAA------------GTAG-TCCAGGAGTCCTGGAAA........................................................................................................2720.50100010
................................................................................................................................................TG-GGAA------------GTAG-TCCAGGAGTCCTGGAA.........................................................................................................2620.50100010
.........................................................................................................................................................................................................................................ACGTTGTGCAGCGGTTATTGC...................................2120.50100010
..........................................................................................................................................C-GCTTTG-GGAA------------GTAG-TCCAGGAG.................................................................................................................2320.50100010
................................................................................................................................................TG-GGAA------------GTAG-TCCAGGAGTCCTGGATA........................................................................................................2720.50100010
....................................................................................................................................................................................................CAAACGCTGTCAAGACCTGGTTGA-CT..................................................................2640.50202000
...............................................................................................................................................TTG-GGAA------------GTAG-TCCAGGAGTCCTGG...........................................................................................................2520.50100010
...........................................................................................................TGCTAT-TGCAAAACCAACCAAC-AA............................................................................................................................................................2420.50101000
..................ATGTAATGGAGTGGCCGGCA-C.........................................................................................................................................................................................................................................................2120.50101000
........................................................................................................................................................................................................................................GACGTTGTGCAGCGGTTATTGCCA.................................2420.50101000
..................................................................................................................................................................................................................................TGCCAAGACGTTGTGCAGCGGTTATT.....................................2620.50101000
......................................................................................................................................................................................................................GGTTGA-CTCAATGCCAAGACGTTGTG................................................2630.33101000
..............................................................................................................................................................................................................CAAGACCTGGTTGA-CTCAATGCCAAG........................................................2630.33100010
.......................................................................................................................................................................................................................GTTGA-CTCAATGCCAAGACGTTG..................................................2330.33101000
.............................................................................................................................................................................................................TCAAGACCTGGTTGA-CTCAATGCCA..........................................................2530.33101000
..................................................................................................................................................................................................................ACCTGGTTGA-CTCAATGC............................................................1830.33100010
...................................................................................................................................................................................................................CCTGGTTGA-CTCAATGCCAAGAC......................................................2330.33101000
.........................................................................................................................................................................................................GCTGTCAAGACCTGGTTGA-CTCA................................................................2330.33101000
..................................................................................................................................................................................................................ACCTGGTTGA-CTCAATGCCAAGACG.....................................................2530.33101000
..................................................................................................................................................................................................................ACCTGGTTGA-CTCAATGCCAAG........................................................2230.33101000
...................................................................................................................................................................................................TCAAACGCTGTCAAGACCTGGTTGA-CT..................................................................2740.25101000
...................................................................................................................................................................................................TCAAACGCTGTCAAGACCTGGTTG......................................................................2440.25101000
...................................................................................................................................................................................................TCAAACGCTGTCAAGACCTGGT........................................................................22200.05101000
....................................................................................................................................................................................................CAAACGCTGTCAAGACCTGGT........................................................................21200.05101000
...............................................................................ACATT------------AAAAAAGCTGTTAA...................................................................................................................................................................................19200.05101000
......................................................................................................................................................................................................AACGCTGTCAAGACCTGGT........................................................................19200.05101000
droVir3
TCAGGGCAAACTCTGGCAACGTTTTGGAGTGGCCTACT-GAGTCGCCTGACCTGAATTCCATCGAAAATCTGTGGTCCGACGTC------------AAGAAGGCAGTTGCTGC-TTCCAAACCAACCACT-ATCGGATC-ACTTTG-GGAA------------GAAA-TTAAAGAGTCCTGGTTCAAAATTCCCCTAAAACGATGCCAGGACTCAGCTGA-TTCCATGCAAAGACGCTGTGCAGCTATTATTGCTAATAAAAGACACTGTACTAAAT-ATTAA---AT-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................TGA-TTCCATGCAAAGACGCTGTGCAG.............................................2621.503000000100000000000000001000000010000000000000000000000000000000
...................................................................................................................TCCAAACCAACCACT-ATCGGATC-ACT..................................................................................................................................................2631.334000000000000000000000000000200000100000100000000000000000000000
.............................................................................................................CTGC-TTCCAAACCAACCACT-ATCGGATC-.....................................................................................................................................................2831.003102000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................CCAACCACT-ATCGGATC-ACTTTG-..............................................................................................................................................2330.672000000000000000000000000000000000200000000000000000000000000000
..............................................................................................................................CACT-ATCGGATC-ACTTTG-GG............................................................................................................................................2030.672000010000000000000000000000000100000000000000000000000000000000
...................................................................................................................TCCAAACCAACCACT-ATCGGATC-A....................................................................................................................................................2430.672000010000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................TC-ACTTTG-GGAA------------GAAA-TTAAAGAGTCC..............................................................................................................2720.501001000000000000000000000000000000000000000000000000000000000000
........................................................TTCCATCGAAAATCTGTGG......................................................................................................................................................................................................................1920.501000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................................................................GA-TTCCATGCAAAGACGCTGT.................................................2120.501000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................TCCAAACCAACCACT-ATCGGATC-ACTT.................................................................................................................................................2730.331000000000000000000000000000000000000000100000000000000000000000
...................................................................................................................TCCAAACCAACCACT-ATCGGATC-AC...................................................................................................................................................2530.331000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................TTCCAAACCAACCACT-ATCGGATC-ACTT.................................................................................................................................................2830.331000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................CTGC-TTCCAAACCAACCACT-ATCGG.........................................................................................................................................................2530.331001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TCCAAACCAACCACT-ATCGGATC-ACC..................................................................................................................................................2630.331000010000000000000000000000000000000000000000000000000000000000
...................................................................................................................TCCAAACCAACCACT-ATCGGATC-ACTTC................................................................................................................................................2830.331000010000000000000000000000000000000000000000000000000000000000
................................................................................................................C-TTCCAAACCAACCACT-ATCGGATC-ACT..................................................................................................................................................2830.331000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................TCCAAACCAACCACT-ATCGGATC-.....................................................................................................................................................2330.331001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TTCCAAACCAACCACT-ATCGGATC-ACT..................................................................................................................................................2730.331000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................CCAAACCAACCACT-ATCGGATC-A....................................................................................................................................................2330.331001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................AACCACT-ATCGGATC-ACTTTG-GG............................................................................................................................................2330.331000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................TGC-TTCCAAACCAACCACT-ATCGGATC-A....................................................................................................................................................2830.331001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TGC-TTCCAAACCAACCACT-ATCGGATC-.....................................................................................................................................................2730.331100000000000000000000000000000000000000000000000000000000000000
..............................................................CGAAAATCTGTGGTCCGACGTC------------AA...............................................................................................................................................................................................2440.251000000000000000000000000000000000000001000000000000000000000000
......................................................................TGTGGTCCGACGTC------------AAGAAGG..........................................................................................................................................................................................2140.251000001000000000000000000000000000000000000000000000000000000000
..........................................................CCATCGAAAATCTGTGGTCCGACGTC------------.................................................................................................................................................................................................2640.251000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................CTGC-TTCCAAACCAACCACT-ATCG..........................................................................................................................................................2450.201000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................TCCAAACCAACCACT-ATC...........................................................................................................................................................1850.201001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CTGC-TTCCAAACCAACCACT-ATCGGAAT-.....................................................................................................................................................2860.171000000000000000000000000010000000000000000000000000000000000000
................................................................AAAATCTGTGGTCCGACGTC------------AA...............................................................................................................................................................................................2260.171000000000000000001000000000000000000000000000000000000000000000
droMoj3
GCAATATA-ATCAAATAGAGGTTTTAGATTGGCCAGCA-AATAGTCCAGATCTAAGCCCAATTGAAAATATTTGGTGGCTAATG------------AAAAAC-CAGCTTCGAAATGA-GCCACAACGGAATATTG-CTG-ACTCGAAAATC------------AAGT-TGCAAGAGATGTAGGACTCAATTTCTCAAGAGCATTGCAAAACTTTGTTAAA-ATCAATGCCAAAACGAGTTAAATGTGTAATTCAGGCCAAGGGCGACGTTACACAAT-TCTAAT--AT-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................CACAACGGAATATTG-CTG-ACTCGA...............................................................................................................................................2425.00101000000
........................................................................................................................CACAACGGAATATTG-CTG-ACTCGAAA.............................................................................................................................................2625.0010400060
........................................................................................................................CACAACGGAATATTG-CTG-ACTCG................................................................................................................................................2323.006500010
...................................................................................................................................................................................TAGGACTCAATTTCTCAAGAGC........................................................................................2222.004220000
........................................................................................................................CACAACGGAATATTG-CTG-ACTCGAAAA............................................................................................................................................2722.004300010
.......................................................................................................................CCACAACGGAATATTG-CTG-ACTCG................................................................................................................................................2422.004400000
.....................................................................................................................................................TC------------AAGT-TGCAAGAGATGTAGGACT.......................................................................................................2422.004100021
........................................................................................................................CACAACGGAATATTG-CTG-ACTCGAAAAT...........................................................................................................................................2821.503300000
........................................................................................................................CACAACGGAATATTG-CTG-ACTC.................................................................................................................................................2221.503300000
........................................................................................................................CACAACGGAATATTG-CTG-ACTCGAA..............................................................................................................................................2521.503300000
.........................................................................................................................ACAACGGAATATTG-CTG-ACTCGA...............................................................................................................................................2321.002200000
............................................TCCAGATCTAAGCCCAATTGAAAATATT.........................................................................................................................................................................................................................28111.00111000010
.....................................................................................................................................................TC------------AAGT-TGCAAGAGATGTAGGACTC......................................................................................................2521.002100010
............................................TCCAGATCTAAGCCCAATTGAAAATAT..........................................................................................................................................................................................................................27111.0011800030
...ATATA-ATCAAATAGAGGTTTTAGAT....................................................................................................................................................................................................................................................................2511.001100000
......TA-ATCAAATAGAGGTTTTAGATTGGCC...............................................................................................................................................................................................................................................................2711.001000010
..........................................................................................................................CAACGGAATATTG-CTG-ACTCGAAA.............................................................................................................................................2421.002200000
............................................TCCAGATCTAAGCCCAATTGAAAAT............................................................................................................................................................................................................................25130.628000080
.........................................................................................................................ACAACGGAATATTG-CTG-ACTCGAAA.............................................................................................................................................2520.501100000
..........................................................................................................................CAACGGAATATTG-CTG-ACTCGA...............................................................................................................................................2220.501100000
.....................................................................................................................................................TC------------AAGT-TGCAAGAGATGTAGG..........................................................................................................2120.501000010
......................................................................................................................................................................T-TGCAAGAGATGTAGGACTCAATTTC................................................................................................2620.501100000
.......................................................................................................................CCACAACGGAATATTG-CTG-ACTC.................................................................................................................................................2320.501100000
........................................................................................................................CACAACGGAATATTG-CTG-ACTCGAAAAA...........................................................................................................................................2820.501100000
.....................................................................................................................................................TC------------AAGT-TGCAAGAGATGTAGGA.........................................................................................................2220.501100000
...................................................................................................................................................................................TAGGACTCAATTTCTCAAGAGCATTGCA..................................................................................2820.501100000
.....................................................................................................................................................TC------------AAGT-TGCAAGAGATGTAGGACTCAAT...................................................................................................2820.501100000
..............................................................................................................................GGAATATTG-CTG-ACTCGAA..............................................................................................................................................1920.501100000
..........................................................................................................................CAACGGAATATTG-CTG-ACTCGAAAATT------------..............................................................................................................................2720.501100000
...........................................................................................................................................................................AAGAGATGTAGGACTCAATTTCTCA.............................................................................................2520.501100000
..............................................................................................................................................TCGAAAATC------------AAGT-TGCAAGAG.................................................................................................................2120.501100000
.....................................................................................................................................................TC------------AAGT-TGCAAGAGATGTAGGAC........................................................................................................2320.501000010
..........................................................................................................................CAACGGAATATTG-CTG-ACTCGAAAAT...........................................................................................................................................2620.501100000
...................................................................................................................................................................................TAGGACTCAATTTCTCAAGAGCATTG....................................................................................2620.501100000
..........................................................................................................................CAACGGAATATTG-CTG-ACTCG................................................................................................................................................2120.501100000
......................................................................................................................................................................T-TGCAAGAGATGTAGGACTCAAT...................................................................................................2320.501100000
..........................................................................................................................CAACGGAATATTG-CTG-ACTCGAA..............................................................................................................................................2320.501100000
................................................................................................................................................................................................................AACTTTGTTAAA-ATCAATGCCAAAACGA....................................................28140.436600000
....................................................................................................................................................................................................................................................GTGTAATTCAGGCCAAGGGCGAC......................23140.436400011
....................................................................................................................................................................................................................................................GTGTAATTCAGGCCAAGGGCGACG.....................24140.365500000
.......................................................................................................................CCACAACGGAATATTG-CTG-ACT..................................................................................................................................................2230.331100000
........................................................................................................................CACAACGGAATATTG-CTG-AC...................................................................................................................................................2030.331100000
.......................................................................................................................CCACAACGGAATATTG-CTG-.....................................................................................................................................................1930.331100000
....................................................................................................................................................................................................................................................GTGTAATTCAGGCCAAGGGCG........................21140.213300000
..............................................................................................................................................................................................................................................TTAAATGTGTAATTCAGGCCAAGGG..........................2550.201000001
............................................TCCAGATCTAAGCCCAATTGAAAATA...........................................................................................................................................................................................................................26110.182200000
............................................TCCAGATCTAAGCCCAATTGAAAATATC.........................................................................................................................................................................................................................28110.182100010
............................................................................................................................................................................................ATTTCTCAAGAGCATTGCAA.................................................................................20130.152200000
................................................................................................................................................................................................................AACTTTGTTAAA-ATCAATGCCAAAACGAG...................................................29140.142200000
............................................TCCAGATCTAAGCCCAATTGAAA..............................................................................................................................................................................................................................23140.142200000
.................................................................................................................................................................................................................ACTTTGTTAAA-ATCAATGCCAAAACGA....................................................27140.142200000
..................................................................................TG------------AAAAAC-CAGCTTCGAAATGA-GCCA.......................................................................................................................................................................26100.101100000
...............................................................................TAATG------------AAAAAC-CAGCTTCGAAATGA-GC.........................................................................................................................................................................27100.101000010
..............................................................................CTAATG------------AAAAAC-CAGCTTCGAAATGA-GC.........................................................................................................................................................................28100.101000010
..................................................................................TG------------AAAAAC-CAGCTTCGAAATGA-GCCAC......................................................................................................................................................................27100.101100000
..................................................................................TG------------AAAAAC-CAGCTTCGAAATGA-GCC........................................................................................................................................................................25100.101100000
...............................................................................................................AAATGA-GCCACAACGGAATATT...........................................................................................................................................................22130.081100000
............................................TCCAGATCTAAGCCCAATTGAAAA.............................................................................................................................................................................................................................24130.081100000
................................................................................................................................................GAAAATC------------AAGT-TGCAAGA..................................................................................................................18140.071000001
...................................................................................................................................................................................................................................................TGTGTAATTCAGGCCAAGGGCGAC......................24140.071100000
...................................................................................................................................................................................................................................................TGTGTAATTCAGGCCAAGGGCG........................22140.071100000
......................................................................................................................................................................................................................................................GTAATTCAGGCCAAGGGCGAC......................21140.071000010
...................................................................................................................................................................................................................................................TGTGTAATTCAGGCCAAGGGCGACG.....................25140.071010000
...........................................................................................................................................................................................................................................................TCAGGCCAAGGGCGACGTTAC.................21140.071010000
....................................................................................................................................................................................................................................................GTGTAATTCAGGCCAAGGGCGT.......................22140.071000001
............................................TCCAGATCTAAGCCCAATTGA................................................................................................................................................................................................................................21140.071100000
...................................................................................................................................................................................................................................................TGTGTAATTCAGGCCAAGG...........................19140.071100000
............................................TCCAGATCTAAGCCCAATT..................................................................................................................................................................................................................................19140.071100000
...................................................................................................................................................................................................................................................TGTGTAATTCAGGCCAAGGGCGACGT....................26140.071100000
....................................................................................................................................................................................................................................................GTGTAATTCAGGCCAAGGGC.........................20140.071100000
.......................TTAGATTGGCCAGCA-AATA......................................................................................................................................................................................................................................................19140.071100000
................................................................................................................................................................................................................AACTTTGTTAAA-ATCAATGCCAAAAC......................................................26140.071100000
................................................................................................................................................................................................................................................AAATGTGTAATTCAGGCCAAGGGCGACG.....................28140.071100000
.......................................................................................................................................................................................................................TTAAA-ATCAATGCCAAAACGAG...................................................22150.071100000
....................................................................................................................................................................................................................TTGTTAAA-ATCAATGCCAAAACGA....................................................24150.071100000
droGri2
GAATACTA-ATATAGGCAAGGGGATGGGATGGCCGGCA-CAGTCTCCAAGTCTCAAACCGATTAAGAATTCGTGGTGCGAAATT------------ATAATGATTGTTTCTAA-CGTAAAGCAAGCGTTA-TATTTCCA-GCCTTG-GGAG------------ACTT-TGAAGAGGCCTTGGAAACCAATTTCTGTAGAAAAAGCCCAACATTTGGTGGA-CCCTGTGCACCATCGCCATATGACGGGAATTTTTAGTGAGGGTTATTCAACCAAAT-ATGTA---GT-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:29 PM