dya_387

exon [dyak_GLEANR_3185:1]; exon [dyak_GLEANR_3185:2]; CDS [Dyak\GE19411-cds]; CDS [Dyak\GE19411-cds]; intron [Dyak\GE19411-in]

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## AGCGGCTGGACGAGATTGACTGCCTAGATGGCCACGAATGCGATGACATGGTGAGAGTGGCCGTAAATCAAAGGGGGCATCTATTTAACGTAAGATTCCCATGAACATTCACATGTTAATTAAAAATAGTGTTTAAGGTGGTTCATCAATAATAATTTTGAAAAATGTCTCTTCAGCTTAAATATGTAATAAGAGCTATTATCTCTAGCTTATCGTGTTTGCTTACTTGCAGGACACATTACAGCTGCGTCTCGGCACTTTCCAGGAGTGGGTGGATTTCCT ************************************************.((.((((((..((((((.....((((.((((..........))))))))...(((((....)))))...........(((((((((.(((..((((((........))))....)).....))).))))))))).......((((((.......)))))).....)))))))))))).)).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V120 male body	M043 female body	M056 embryo	V058 head
.GCGGCTGGACGAGATTGAC......................................................................................................................................................................................................................................................................	19	0	1	1.00	1	0	1	0	0
.......................CTAGATGGCCACGAATGCGAT..............................................................................................................................................................................................................................................	21	0	1	1.00	1	0	0	1	0
........................................................................................................................................................................................................................................................GTCTCGGCACTTTCCAGGAGTGGGTG........	26	0	1	1.00	1	1	0	0	0
..................................CGAATGCGATGACATGGTGAGA..................................................................................................................................................................................................................................	22	0	1	1.00	1	1	0	0	0
...........................................................................................................................................................................................................................................ACATTACAGCTGCGTCTCGGCA.........................	22	0	1	1.00	1	1	0	0	0
..........................................................................................................................................................................................................................................CACATTACAGCTGCGTCTCGG...........................	21	0	1	1.00	1	0	1	0	0
.........................................................................................................................................................................................................................................................TCTCGGCCCTTTCGAGGA...............	18	2	4	0.25	1	0	0	0	1
...............................................................................................................................................................................CCTTAAATATGTAAGAAG.........................................................................................	18	2	20	0.05	1	0	1	0	0

Species	Coordinate	ID	Alignment
droYak3	2L:20067155-20067436 +	dya_387	AGCGGCTGGACGAGATTGACTGCCTAGATGGCCACGAATGCGATGACATGGTGAGAGTGGCCGTAAATCAAAGGGGG-CA--TCTAT-TTAACGTA------AGA----TTCCCA--TGAACATTCAC------ATGT------------------------------------------TAATTAA---------------------AAAT------------------------------AGT-GTTTAAGGTGGTTCATCAATAATAATTTT-GAAAAATGTC-------------------------------------------------------------------------------------TCTTCAGCTTAAATATGTAATAAGAGCTATTA------------------------------------------------------TCTCTAGCTTA---T-CGTG--------T--------------------------------------------------------------------------------------------------------------------T--TGCT-TACTTGCAGGACACATTACAGCTGCGTCTCGGCACTTTCCAGGAGTGGGTGGATTTCCT
droEre2	scaffold_4929:7008484-7008671 -		AGCGGCTGGACGATATTGACTGCCTGGATGAGCACGAAGGTGATGACATGGTGAGAGTGGTTGTAAATCAATGGGGG-TG--TC--ATATATAATA------CTACCTTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTATATTC-------TACCTTCA----------------------------------------------------------------C------------------------------------------------------------------------------------------------------------TTG--------T--------------------------------------------------------------------------------------------------------------------T--TGTT-TACTTGTAGGGCACTTTACAGCTGCGCCTGAACACTTTCCAGGAGTGGGTGGATTTCCT
droSec2	scaffold_3:1525291-1525520 -		AACGGCTGGACGAGATTGACTGCCTAGATGAGCGCGAGGGTGATGACACGGTGAGATTCGTTGTACATCAAGGAAGC-TA--TCTAT-T------------------------------------------------------------------------------------------------GA---------------------AACT------------------------------AGT-TCTTGAGACGGTTTATCAGCAATAATTCTAGAAAAATCCC-------------------------------------------------------------------------------------TGTTCAGATAAATTATTTCATAAGAACCATTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--CATA-CTCTTGTAGCACACCTGCCAGTTGCGTCTGGTCACTTTCCAGGAGTGGGTGGATTTCCT
droSim2	2l:14902224-14902453 -	dsi_30344	AGCGGCTGGACGAGATTGACTGCCTAGATGAGCGCGAGGGTGATGACACGGTGAGATTTGTTGTAAATCAAGGAGGC-TA--TCTAT-T------------------------------------------------------------------------------------------------GA---------------------AACT------------------------------AGT-TCTTAAGACGGTTTATCAGCAATAATTCTCGAAAAATCAA-------------------------------------------------------------------------------------TCTTCAGATAAATGATTTCATAAGAACCATTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--CATA-CTCTTGTAGCACACCTGCCAGTTGCGTCTGGTCACTTTCCAGGAGTGGGTGGATTTCCT
dm3	chr2L:15263615-15263819 -		AGCGGCTGGACGAGATTGACTGCCTAGATGAGCACGAGGGTGATGACATGGTGAGATTCGTTGTAAATCAAGGATGG-TA--TCCAT-T------------------------------------------------------------------------------------------------GA---------------------AACT------------------------------AAT-TC-------------------------CTAGCAAAATCCC-------------------------------------------------------------------------------------CCTTGAGATAAATTATTTTATATGACCCATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--CATA-CCCTTTTAGCACACTTGCCAGTTGCGTCTGGTCACTTTTCAGGAGTGGGTGGATTTCCT
droEug1	scf7180000409231:168711-168991 -		ACCGGCTGGCCGAGATTGACTGTCTGGATGGGCAGGGAGGCGATGCAATGGTGAGCTGATAGGTAAACCATTGGGGG-TAAATC----------GA------GA-----------ATAGTTTATAAATTCTCCTTTAAACTTTTTATATATTAGATATTTCTTTAAATTTCTTCCATTTACTATTAA---------------------AAAT------------------------------AGT-TTTTCAA----------------------------------------------------------------------------------------------------------------TTTGTT-------------------------------------------------------------------------------------------------TGT---------------TTAAATTTTTAATTTACAA--------------------------------------------ACCA--------------------------------AGT--CCTAATTT-----CTTATT-GCTTTTTAGTACACCTCCCAGCTCCGACTGGTTACTTTCCAGGAGTGGGTTGACTTCCT
droBia1	scf7180000302261:1313446-1313746 +		AGCGGCTGGACGAGATTGACTGCCTGGATGGGCAGGGAGGTGACGCAATGGTGAGCGGACAGACAGTCCAAGG-TGGTCAAA-GGAAAA-----GGAAAGAATTGACATCTAAAAATAGTCTAG----------------------TATATTAGTTA------------------------------GCAGGGTTTAGTTTCTCAGGAAACACTGTGAGCACTAGGTCTTATTAAGAATATCCTTGTATTATTACATT---------------------------------------------------------------------------------------------------------------------------------------AAAAAT------------------------------------------------------------------------AT-------------TCTGAAATCCTCTTTAATA--------------------------------------------TT----------------------------AAATA--------------TTTTT--CCTT-CACCTCCAGTACACCTCGCAGCTGCGTCTGGTCACCTATCAGGAGTGGGTGGACATCCT
droTak1	scf7180000415438:110531-110690 -		ATTAAAATCAAAGTTTAAATGGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTATTATGAACCT------------------------------AATGTATTAATACGTTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATTGTACTTGGAAA--------------------------------------------AT----------------------------AAACCTTTTCC--------TTTAC--CTCT-AACCTCTAGTACACCTCCGAGCTGCGTCTGGTGACCTTCCAGGAATGGGTTGAGTTCCT
droEle1	scf7180000491028:771740-771900 +		AGCGGCTGGACGAGATCGACTGCCTGGATGAACAAAGCGGGGATGCAATGGTGAGCGGATAGGTAATCCATTGGAGG-ATAT-ATAAAT-----TA------TTAATTATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGTATTTGCTGTTGAGAAAATTCA----------------------------------------------------------------TTTATT-------------------------------------------------------------------------------------------------TGT---------------TGAAAAAGTTAATTCAAAA--------------------------------------------ATAAT---------------------------------A--------------------------------------------------------------------------------A
droRho1	scf7180000780250:3418-3686 -		AGCGACTGGACGAGATTGACTGCCTGGCTGGGCAGGGCGTAGATGCAATGGTGAGCGGATAGGTAATCCATTGGGGG-CAAT-GTCATA-----GA------GGAAATTTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGTATCAATTGGCTTGGAAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA---------------CTAGAAAATTAATTTCAAAATATATTATCAAAAGAGAAAGAAATATCACGAACTAAAAGGTA-AT----------------------------AAACAAAGCCT--------TTTTT--CCTT-TTCTTATAGCAAAGCTCCCAGCTGCGACTGGTCACATTTCAGGAGTGGGTGGACTTCCT
droFic1	scf7180000454087:296735-297013 +		AGCGGCTGGACGAGATTGACTGCCTGGACGGGCAATCCGGGGATGCAATGGTGAGCAGTTAGGTAATTCAGGG--GG-TAAATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCA---CT-------------------------------------------------------------TTTCGATAATAGAAATTAAATATGATTTGAGAGTAAATTATTTATAATAGCCTTAATAATTACATAA---AT--TC---------TAAGCTTCTTTTTTCGAAA------------AA----------------GAGTTAAAAGGAATAT----------------------------AAATCCATA--CCCGATTT-----CTTTTA-AACTTCTAGTATACCTCCCAACTGCGTTTGGTGACATACCAGGAGTGGGTGGACTTCCT
droKik1	scf7180000302389:329636-329863 -		AGCGGCTGGGCGAGATCGATGGCCTGAATGAAGATTGTGGTGATACTATGGTGAGCTTAGACATATCTTAAAAATAA-TA--TATGT-----------------------------------------------------------------------------------------------------------------------------------------------------------ATG-TC-------------------------CTAAAATATTCGTATTTGAGAT---------------------------------------------------------------------------------------TTGAGCCTGGGACTCATG--------------------------------------------------------------------TGT---------------GCAAAAAAATATTATT-----------------------------------------------------------------------------AAACAAAGTAT--------TCTCT--CCTTCCCCCCATAGTTTAGCACCCAACTGCGTCTGGTGACCTTCCAGGAGTGGGTGGACTTTTT
droAna3	scaffold_12916:7564734-7564981 -		AGAGACTGGACGAGATTGACTGCCTGGAGGATCAGGGCGGAGATGCAATGGTGAGGGGCTACAG--A------------------------------------------------CTAGAACATAAAT------CTAT----------------------------------------------------------ACTTTTTAAAGAATTT----------------------------------------------------------------------------------------ACGAGGTTGTTAAAGTCAGGAAGTTATTAAAACCA---CTGACAGATTTAAAGCACATCGTTA-----ATA-------------------------------------------------------------------------------------------------GGT---------------TTTAAATTTTAATTT--------------------------------------------------------------------------------------------------ATGCATCCCG-CCATTACAGCACAGCTCCCAGCTCCGTCTGGTCACTTTCCAAGAGTGGGTGGACTTCTT
droBip1	scf7180000396554:181177-181479 -		AGAGACTGGACGAGATCGACAGCCTGGAGGATCAGGGCGGAGATGCAATGGTGAGGGTCTAGGGACT--------------------------------------------------AGAACATCTAG------CTAT------------------------------------------CAATTAT----------------AAAGACT----GTGAAGT--------------------------CTTA-------------------------------------------------ACGAGGTTGTTAATGTCAAAAAGTCATTA--ACCATGAATGACGAACTTAAAACACATCGTTAAAATTATA-------------------------------------------------------------------------------------------------GGT---------------TTTAAATGTTAATTTATAA--------------------------------------------AAAATGTGTTCTTGTTTCTAATTTATAAAA----ACCTCAT--------TATGC--CCCG-CCCTTGCAGCACAGTTCCCAGCTCCGTTTGGTAACTTACCAGGAGTGGGTGGACTTCTT
dp5	Unknown_group_77:21610-21674 +		AGCGGCTAGACGAGATCGGCTGGCTTGATTCTCAGAGCGGAGATTCAATGGTGATAGGCCGAAA--A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2	scaffold_28:736912-736975 -		CTTTCTTGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCTCCCATTCCAGCTGCGACTGATCACTTTCCAAGAGTGGATCGACTTCCT
droWil2	scf2_1100000004577:1906944-1907010 +		AGCGATTGGAGGAGATTGATTGTCTGGACAAGCAAAAGGGTGATGCAACGGTGAGATGAGTCCCAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3	scaffold_12963:11913638-11913808 -		AGCGACTCGAGGAGATCGATTGCATGGATCAACAAAGCGGCGGTGATTCGGTGAGTAATAT-----------------------------TTGATA------ACAAATTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTAAAAATC--------GCTTTAC----------------------------------------------------------------T------------------------------------------------------------------------------------------------------------TTGATTGTTGAT--------------------------------------------------------------------------------------------------------------------T--TGCA-TTCCAGAATGTGACGCCACAGTTGCGTCTGGTAACATTCCAGGATTGGGTCGATTTGCT
droMoj3	scaffold_6500:20617278-20617481 -		ATCGACTCAAGGAGATCGATTGCCTGGATGAGCAATGCGGCGGCGATTCGGTGGGTATTAG-GAAGGTGGAAGGAAG-TG--CT--AAGCAACATA------CAA----------------------------------------------------------------------------------------------------------------------------------------------T-------------------------TCAATAAATTTCCATTAGTTCC---------------------------------------------------------------------------------------TTGAGCTCCTGAATACTATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAC--TCCA-ATTTTCCAGAAATTCACCAAACTGCGGCTGGCCACATTTCAGGATTGGGTCGACCTACT
droGri2	scaffold_15126:5458267-5458322 -		AGCGACTCAAGGACATCGATTGCATGGATCAACAGGGCAGCGGAGATTCGGTAAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droYak3

AGCGGCTGGACGAGATTGACTGCCTAGATGGCCACGAATGCGATGACATGGTGAGAGTGGCCGTAAATCAAAGGGGG-CA--TCTAT-TTAACGTA------AGA----TTCCCA--TGAACATTCAC------ATGT------------------------------------------TAATTAA---------------------AAAT------------------------------AGT-GTTTAAGGTGGTTCATCAATAATAATTTT-GAAAAATGTC-------------------------------------------------------------------------------------TCTTCAGCTTAAATATGTAATAAGAGCTATTA------------------------------------------------------TCTCTAGCTTA---T-CGTG--------T--------------------------------------------------------------------------------------------------------------------T--TGCT-TACTTGCAGGACACATTACAGCTGCGTCTCGGCACTTTCCAGGAGTGGGTGGATTTCCT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.GCGGCTGGACGAGATTGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................CTAGATGGCCACGAATGCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCGGCACTTTCCAGGAGTGGGTG........	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................CGAATGCGATGACATGGTGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTACAGCTGCGTCTCGGCA.........................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATTACAGCTGCGTCTCGG...........................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

AGCGGCTGGACGATATTGACTGCCTGGATGAGCACGAAGGTGATGACATGGTGAGAGTGGTTGTAAATCAATGGGGG-TG--TC--ATATATAATA------CTACCTTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTATATTC-------TACCTTCA----------------------------------------------------------------C------------------------------------------------------------------------------------------------------------TTG--------T--------------------------------------------------------------------------------------------------------------------T--TGTT-TACTTGTAGGGCACTTTACAGCTGCGCCTGAACACTTTCCAGGAGTGGGTGGATTTCCT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCAGGAGTGGGTGGATTT...	21	1	1.00	1	1	0	0	0	0	0	0
.......................CTGGATGAGCACGAAGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	2	0.50	1	0	0	0	1	0	0	0

droSec2

AACGGCTGGACGAGATTGACTGCCTAGATGAGCGCGAGGGTGATGACACGGTGAGATTCGTTGTACATCAAGGAAGC-TA--TCTAT-T------------------------------------------------------------------------------------------------GA---------------------AACT------------------------------AGT-TCTTGAGACGGTTTATCAGCAATAATTCTAGAAAAATCCC-------------------------------------------------------------------------------------TGTTCAGATAAATTATTTCATAAGAACCATTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--CATA-CTCTTGTAGCACACCTGCCAGTTGCGTCTGGTCACTTTCCAGGAGTGGGTGGATTTCCT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGTCTGGTCACTTTCCAGG................	23	1	1.00	1	1	0	0	0
.......................CTAGATGAGCGCGAGGGTGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0

droSim2

AGCGGCTGGACGAGATTGACTGCCTAGATGAGCGCGAGGGTGATGACACGGTGAGATTTGTTGTAAATCAAGGAGGC-TA--TCTAT-T------------------------------------------------------------------------------------------------GA---------------------AACT------------------------------AGT-TCTTAAGACGGTTTATCAGCAATAATTCTCGAAAAATCAA-------------------------------------------------------------------------------------TCTTCAGATAAATGATTTCATAAGAACCATTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--CATA-CTCTTGTAGCACACCTGCCAGTTGCGTCTGGTCACTTTCCAGGAGTGGGTGGATTTCCT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.....CTGGACGAGATTGACTGCCTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
......TGGACGAGATTGACTGCCTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCTGCCAGTTGCGTCTG.............................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

dm3

AGCGGCTGGACGAGATTGACTGCCTAGATGAGCACGAGGGTGATGACATGGTGAGATTCGTTGTAAATCAAGGATGG-TA--TCCAT-T------------------------------------------------------------------------------------------------GA---------------------AACT------------------------------AAT-TC-------------------------CTAGCAAAATCCC-------------------------------------------------------------------------------------CCTTGAGATAAATTATTTTATATGACCCATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--CATA-CCCTTTTAGCACACTTGCCAGTTGCGTCTGGTCACTTTTCAGGAGTGGGTGGATTTCCT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
................................CACGAGGGTGATGACATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CGAGATTGACTGCCTAGATGAGCACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................AGATGAGCACGAGGGTGATGACATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................ACATGGTGAGATTCGTTGTAAATCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................GATGAGCACGAGGGTGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACTTTTCAGGAGTGGGT.........	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................GCACGAGGGTGATGACATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AGCGGCTGGACGAGATTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GCCTAGATGAGCACGAGGGTGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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....................TGCCTAGATGAGCACGAGGGTGATGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.........ACGAGATTGACTGCCTAGATGAGCACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACTTGCCAGTTGCGTCTGGTCACT.......................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............AGATTGACTGCCTAGATGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTTGCCAGTTGCGTCTGGTCACTTT.....................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................CATGGTGAGATTCGTTGTAAATCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...............................GCACGAGGGTGATGACATGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTCACTTTTCAGGAGTGGGA.........	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................ATGACATGGTGAGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	15	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEug1

ACCGGCTGGCCGAGATTGACTGTCTGGATGGGCAGGGAGGCGATGCAATGGTGAGCTGATAGGTAAACCATTGGGGG-TAAATC----------GA------GA-----------ATAGTTTATAAATTCTCCTTTAAACTTTTTATATATTAGATATTTCTTTAAATTTCTTCCATTTACTATTAA---------------------AAAT------------------------------AGT-TTTTCAA----------------------------------------------------------------------------------------------------------------TTTGTT-------------------------------------------------------------------------------------------------TGT---------------TTAAATTTTTAATTTACAA--------------------------------------------ACCA--------------------------------AGT--CCTAATTT-----CTTATT-GCTTTTTAGTACACCTCCCAGCTCCGACTGGTTACTTTCCAGGAGTGGGTTGACTTCCT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AGCGGCTGGACGAGATTGACTGCCTGGATGGGCAGGGAGGTGACGCAATGGTGAGCGGACAGACAGTCCAAGG-TGGTCAAA-GGAAAA-----GGAAAGAATTGACATCTAAAAATAGTCTAG----------------------TATATTAGTTA------------------------------GCAGGGTTTAGTTTCTCAGGAAACACTGTGAGCACTAGGTCTTATTAAGAATATCCTTGTATTATTACATT---------------------------------------------------------------------------------------------------------------------------------------AAAAAT------------------------------------------------------------------------AT-------------TCTGAAATCCTCTTTAATA--------------------------------------------TT----------------------------AAATA--------------TTTTT--CCTT-CACCTCCAGTACACCTCGCAGCTGCGTCTGGTCACCTATCAGGAGTGGGTGGACATCCT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

ATTAAAATCAAAGTTTAAATGGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTATTATGAACCT------------------------------AATGTATTAATACGTTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATTGTACTTGGAAA--------------------------------------------AT----------------------------AAACCTTTTCC--------TTTAC--CTCT-AACCTCTAGTACACCTCCGAGCTGCGTCTGGTGACCTTCCAGGAATGGGTTGAGTTCCT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AGCGGCTGGACGAGATCGACTGCCTGGATGAACAAAGCGGGGATGCAATGGTGAGCGGATAGGTAATCCATTGGAGG-ATAT-ATAAAT-----TA------TTAATTATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGTATTTGCTGTTGAGAAAATTCA----------------------------------------------------------------TTTATT-------------------------------------------------------------------------------------------------TGT---------------TGAAAAAGTTAATTCAAAA--------------------------------------------ATAAT---------------------------------A--------------------------------------------------------------------------------A	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AGCGACTGGACGAGATTGACTGCCTGGCTGGGCAGGGCGTAGATGCAATGGTGAGCGGATAGGTAATCCATTGGGGG-CAAT-GTCATA-----GA------GGAAATTTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGTATCAATTGGCTTGGAAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA---------------CTAGAAAATTAATTTCAAAATATATTATCAAAAGAGAAAGAAATATCACGAACTAAAAGGTA-AT----------------------------AAACAAAGCCT--------TTTTT--CCTT-TTCTTATAGCAAAGCTCCCAGCTGCGACTGGTCACATTTCAGGAGTGGGTGGACTTCCT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AGCGGCTGGACGAGATTGACTGCCTGGACGGGCAATCCGGGGATGCAATGGTGAGCAGTTAGGTAATTCAGGG--GG-TAAATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCA---CT-------------------------------------------------------------TTTCGATAATAGAAATTAAATATGATTTGAGAGTAAATTATTTATAATAGCCTTAATAATTACATAA---AT--TC---------TAAGCTTCTTTTTTCGAAA------------AA----------------GAGTTAAAAGGAATAT----------------------------AAATCCATA--CCCGATTT-----CTTTTA-AACTTCTAGTATACCTCCCAACTGCGTTTGGTGACATACCAGGAGTGGGTGGACTTCCT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AGCGGCTGGGCGAGATCGATGGCCTGAATGAAGATTGTGGTGATACTATGGTGAGCTTAGACATATCTTAAAAATAA-TA--TATGT-----------------------------------------------------------------------------------------------------------------------------------------------------------ATG-TC-------------------------CTAAAATATTCGTATTTGAGAT---------------------------------------------------------------------------------------TTGAGCCTGGGACTCATG--------------------------------------------------------------------TGT---------------GCAAAAAAATATTATT-----------------------------------------------------------------------------AAACAAAGTAT--------TCTCT--CCTTCCCCCCATAGTTTAGCACCCAACTGCGTCTGGTGACCTTCCAGGAGTGGGTGGACTTTTT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

AGAGACTGGACGAGATTGACTGCCTGGAGGATCAGGGCGGAGATGCAATGGTGAGGGGCTACAG--A------------------------------------------------CTAGAACATAAAT------CTAT----------------------------------------------------------ACTTTTTAAAGAATTT----------------------------------------------------------------------------------------ACGAGGTTGTTAAAGTCAGGAAGTTATTAAAACCA---CTGACAGATTTAAAGCACATCGTTA-----ATA-------------------------------------------------------------------------------------------------GGT---------------TTTAAATTTTAATTT--------------------------------------------------------------------------------------------------ATGCATCCCG-CCATTACAGCACAGCTCCCAGCTCCGTCTGGTCACTTTCCAAGAGTGGGTGGACTTCTT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

droBip1

AGAGACTGGACGAGATCGACAGCCTGGAGGATCAGGGCGGAGATGCAATGGTGAGGGTCTAGGGACT--------------------------------------------------AGAACATCTAG------CTAT------------------------------------------CAATTAT----------------AAAGACT----GTGAAGT--------------------------CTTA-------------------------------------------------ACGAGGTTGTTAATGTCAAAAAGTCATTA--ACCATGAATGACGAACTTAAAACACATCGTTAAAATTATA-------------------------------------------------------------------------------------------------GGT---------------TTTAAATGTTAATTTATAA--------------------------------------------AAAATGTGTTCTTGTTTCTAATTTATAAAA----ACCTCAT--------TATGC--CCCG-CCCTTGCAGCACAGTTCCCAGCTCCGTTTGGTAACTTACCAGGAGTGGGTGGACTTCTT	Size	Hit Count	Total Norm	Total
No Reads

dp5

AGCGGCTAGACGAGATCGGCTGGCTTGATTCTCAGAGCGGAGATTCAATGGTGATAGGCCGAAA--A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.....................................CGGAGATTCAATGGTGATAGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	510.00	510	0	322	49	0	34	0	2	99	4	0
.....................................CGGAGATTCAATGGTGATAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	206.00	206	0	169	11	0	15	0	0	9	2	0
.....................................CGGAGATTCAATGGTGATAGGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	137.00	137	0	123	6	0	1	0	3	3	1	0
.....................................CGGAGATTCAATGGTGATAGGCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	126.00	126	0	125	0	0	0	0	0	1	0	0
......................................GGAGATTCAATGGTGATAGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	34.00	34	0	34	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	32.00	32	0	13	2	0	5	0	1	9	2	0
.....................................CGGAGATTCAATGGTGATAGGCCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	19.00	19	0	17	2	0	0	0	0	0	0	0
......................................GGAGATTCAATGGTGATAGGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	18.00	18	0	18	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGCCGAAA--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	14.00	14	0	10	0	0	1	0	0	3	0	0
......................................GGAGATTCAATGGTGATAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	14.00	14	0	14	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGCCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	13.00	13	0	12	1	0	0	0	0	0	0	0
......................................GGAGATTCAATGGTGATAGGCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	12.00	12	0	12	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	8.00	8	0	8	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	6.00	6	0	5	0	0	0	0	0	1	0	0
.....................................CGGAGATTCAATGGTGATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	5.00	5	0	5	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGCCGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	4.00	4	0	3	1	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	3.00	3	0	2	0	0	0	0	0	1	0	0
......................................GGAGATTCAATGGTGATAGGCCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	3.00	3	0	3	0	0	0	0	0	0	0	0
......................................GGAGATTCAATGGTGATAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.......................................GAGATTCAATGGTGATAGGCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.......................................GAGATTCAATGGTGATAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGCCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	1	1	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.......................................GAGATTCAATGGTGATAGGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGCCGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGCCGAAA--A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	28	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......AGACGAGATCGGCTGGCTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...............................TCAGAGCGGAGATTCAATGGTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	2	1.50	3	0	2	0	0	1	0	0	0	0	0
....................TGGCTTGATTCTCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	17	1	1.00	1	0	0	0	0	0	0	0	1	0	0
AGCGGCTAGACGAGATCGGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................AGAGCGGAGATTCAATGGTGATAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	1	0	0
......................GCTTGATTCTCAGAGCGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............TCGGCTGGCTTGATTCTCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......TAGACGAGATCGGCTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......TAGACGAGATCGGCTGGCTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGCCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0
......................................GGAGATTCAATGGTGATAGGCCGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....CTAGACGAGATCGGCTGGCTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................GAGATTCAATGGTGATAGGCCGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................TGGCTTGATTCTCAGAGCGGAGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................CGGCTGGCTTGATTCTCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................GAGATTCAATGGTGATAGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............TCGGCTGGCTTGATTCTCAGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................GGAGATTCAATGGTGATAGGCCGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................GAGATTCAATGGTGATAGGCCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................GCGGAGATTCAATGGTGATAGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0	0	0	0
....................TGGCTTGATTCTCAGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	1	0	0
.....CTAGACGAGATCGGCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............TCGGCTGGCTTGATTCTCAGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................AGAGCGGAGATTCAATGGTGATAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..CGGCTAGACGAGATCGGCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................TGGCTTGATTCTCAGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	1	0	0
...GGCTAGACGAGATCGGCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...GGCTAGACGAGATCGGCTGGCTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......TAGACGAGATCGGCTGGCTTGATTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0
......................................GGAGATTCAATGGTGATAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................GATTCAATGGTGATAGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................TGGCTTGATTCTCAGAGCGGAGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................TCTCAGAGCGGAGATTCAATGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............................TCTCAGAGCGGAGATTCAATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....................................CGGAGATTCAATGGTGATAGGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0

droPer2

CTTTCTTGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCTCCCATTCCAGCTGCGACTGATCACTTTCCAAGAGTGGATCGACTTCCT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACTGATCACTTTCCAAG................	20	2	1.00	2	0	2	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGACTGATCACTTTCCAAGAGTG............	25	2	0.50	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGACTGATCACTTTCCAAGA...............	22	2	0.50	1	0	1	0	0	0	0

droWil2

AGCGATTGGAGGAGATTGATTGTCTGGACAAGCAAAAGGGTGATGCAACGGTGAGATGAGTCCCAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...GATTGGAGGAGATTGATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0

droVir3

AGCGACTCGAGGAGATCGATTGCATGGATCAACAAAGCGGCGGTGATTCGGTGAGTAATAT-----------------------------TTGATA------ACAAATTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTAAAAATC--------GCTTTAC----------------------------------------------------------------T------------------------------------------------------------------------------------------------------------TTGATTGTTGAT--------------------------------------------------------------------------------------------------------------------T--TGCA-TTCCAGAATGTGACGCCACAGTTGCGTCTGGTAACATTCCAGGATTGGGTCGATTTGCT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.....CTCGAGGAGATCGATTGCATGGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CGACTCGAGGAGATCGATTGCATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGTAACATTCCAGGATTGGGTCGA......	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGACGCCACAGTTGCGT................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACATTCCAGGATTGGGTCGATT....	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...GACTCGAGGAGATCGATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............TCGATTGCATGGATCAACAAAGCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACATTCCAGGATTGGGT.........	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................CGATTGCATGGATCAACAAAGCGGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGTCTGGTAACATTCCAGGATTGG...........	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................CAAAGCGGCGGTGATTCGAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ATCGACTCAAGGAGATCGATTGCCTGGATGAGCAATGCGGCGGCGATTCGGTGGGTATTAG-GAAGGTGGAAGGAAG-TG--CT--AAGCAACATA------CAA----------------------------------------------------------------------------------------------------------------------------------------------T-------------------------TCAATAAATTTCCATTAGTTCC---------------------------------------------------------------------------------------TTGAGCTCCTGAATACTATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAC--TCCA-ATTTTCCAGAAATTCACCAAACTGCGGCTGGCCACATTTCAGGATTGGGTCGACCTACT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...............................GCAATGCGGCGGCGATTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
..............................................................................................................................................................................................................................................................................................................................................................................................TTGAGCTCCTGAATACTATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAC--................................................................	25	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACCAAACTGCGGCTC.............................	19	1	1.00	1	0	0	1	0	0	0

droGri2

AGCGACTCAAGGACATCGATTGCATGGATCAACAGGGCAGCGGAGATTCGGTAAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dya_387

2L:20067205-20067386 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads