ID:

dya_374

 Coordinate:

2L:18944093-18944151 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.0 -4.9 -4.0

Flybase annnotation

CDS [Dyak\GE19359-cds]; exon [dyak_GLEANR_3132:4]; exon [dyak_GLEANR_3132:3]; CDS [Dyak\GE19359-cds]; intron [Dyak\GE19359-in]

No Repeatable elements found

mature
  1. dya_374  2L:18944095-18944121 +
  2. v2_chr2L_random_004:260-286 -
star

Sense Strand Reads

##################################################-----------------------------------------------------------##################################################
TGCAGTTGACTGATCGCCTCAAGGTCGTGGCCACTCCTGCCAACTGGACCGTGAGTATCTCTACCTACTTCCTGCAAGCTGTTTTGTACTAACTATGATTTGTTAATAGCCTGGCACTAAGGTAATGATCCTGCCCACCGTCACCGATGAGGAGGCCTA
**************************************************..........(((.........(((((......)))))..................)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 GSM1528802
follicle cells		 V120
male body		 V046
embryo
 M026
head
 V052
head
....................................................GAGTATCTCTACCTACTTCCTGCAAGC................................................................................ 27 0 2 60.00 120 108 12 0 0 0 0 0
.......................................................................................................TAATAGCCTGGCACTAAGGTAATGA............................... 25 0 4 42.50 170 169 1 0 0 0 0 0
TGCAGTTGACTGATCGCCTCAAGGTCG.................................................................................................................................... 27 0 6 20.00 120 76 0 0 40 3 0 1
....................................................GAGTATCTCTACCTACTTCCTGCAAG................................................................................. 26 0 2 14.00 28 27 1 0 0 0 0 0
...................................................................................................................................TGCCCACCGTCACCGATGAGGAGGCC.. 26 0 3 13.00 39 22 1 15 0 1 0 0
..................................TCCTGCCAACTGGACCGTGAGTATC.................................................................................................... 25 0 2 11.50 23 2 1 20 0 0 0 0
....................................................GAGTATCTCTACCTACTTCCTGCA................................................................................... 24 0 2 11.00 22 22 0 0 0 0 0 0
TGCAGTTGACTGATCGCCTCAAGGT...................................................................................................................................... 25 0 6 9.83 59 32 1 17 8 0 1 0
..................TCAAGGTCGTGGCCACTCCTGCCAAC................................................................................................................... 26 0 4 8.25 33 20 1 11 0 0 1 0
.....................................................AGTATCTCTACCTACTTCCTGCAAGC................................................................................ 26 0 2 8.00 16 15 1 0 0 0 0 0
.....................................TGCCAACTGGACCGTGAGTATCTCTACC.............................................................................................. 28 0 2 7.50 15 6 9 0 0 0 0 0
......TGACTGATCGCCTCAAGGTCGTGGC................................................................................................................................ 25 0 5 6.00 30 17 0 11 2 0 0 0
........................................................................................................AATAGCCTGGCACTAAGGTAATGA............................... 24 0 4 6.00 24 24 0 0 0 0 0 0
................................................................................................................................TCCTGCCCACCGTCACCGATGAGGAG..... 26 0 3 5.67 17 16 1 0 0 0 0 0
...................................................TGAGTATCTCTACCTACTTCCTGCA................................................................................... 25 0 2 4.50 9 9 0 0 0 0 0 0
.......................................................................................................TAATAGCCTGGCACTAAGGTAATG................................ 24 0 4 4.25 17 17 0 0 0 0 0 0
..................................TCCTGCCAACTGGACCGTGAGTATCTC.................................................................................................. 27 0 2 4.00 8 7 0 0 0 1 0 0
...................................................................................................................................TGCCCACCGTCACCGATGAGGAGG.... 24 0 3 3.67 11 6 2 0 0 3 0 0
....................................................................................TGTACTAACTATGATTTGTTAATAGCC................................................ 27 0 2 3.50 7 2 5 0 0 0 0 0
.........................................................TCTCTACCTACTTCCTGCAAGCTGTT............................................................................ 26 0 2 3.50 7 7 0 0 0 0 0 0
.........................................................TCTCTACCTACTTCCTGCAAGCTGTTT........................................................................... 27 0 2 3.50 7 5 2 0 0 0 0 0
.........................................................................................TAACTATGATTTGTTAATAGCCTGGCAC.......................................... 28 0 4 3.25 13 7 6 0 0 0 0 0
........................TCGTGGCCACTCCTGCCAACTGGAC.............................................................................................................. 25 0 4 3.25 13 1 0 12 0 0 0 0
...................................................................................................................................TGCCCACCGTCACCGATGAGGAGGCCA. 27 1 3 3.00 9 0 0 9 0 0 0 0
.....................................TGCCAACTGGACCGTGAGTATCTC.................................................................................................. 24 0 2 3.00 6 4 1 0 0 1 0 0
......TGACTGATCGCCTCAAGGTCGTGGCCAT............................................................................................................................. 28 1 4 2.75 11 0 0 11 0 0 0 0
.............................................................................................TATGATTTGTTAATAGCCTGGCACT......................................... 25 0 4 2.75 11 4 7 0 0 0 0 0
TGCAGTTGACTGATCGCCTCAAGGTC..................................................................................................................................... 26 0 6 2.67 16 13 2 0 1 0 0 0
......................................................................................................................AAGGTAATGATCCTGCCCACCGTCACC.............. 27 0 3 2.67 8 1 1 6 0 0 0 0
.............................................................................................................................TGATCCTGCCCACCGTCACCGATGAGG....... 27 0 3 2.67 8 6 2 0 0 0 0 0
.......................................................................................................TAATAGCCTGGCACTAAGGTAATGAT.............................. 26 0 4 2.50 10 9 1 0 0 0 0 0
.....................................................................TCCTGCAAGCTGTTTTGTACTAACTA................................................................ 26 0 2 2.50 5 4 0 0 0 1 0 0
...............................................................................................TGATTTGTTAATAGCCTGGCACTAAGG..................................... 27 0 4 2.50 10 9 1 0 0 0 0 0
....................................................GAGTATCTGTACCTACTTCCTGCAAGC................................................................................ 27 1 2 2.50 5 5 0 0 0 0 0 0
.......................................................................................................TAATAGCCGGGCACTAAGGTAATGA............................... 25 1 4 2.25 9 9 0 0 0 0 0 0
TGCAGTTGACTGATCGCCTCAAGG....................................................................................................................................... 24 0 6 2.00 12 12 0 0 0 0 0 0
.......................................................TATCTCTACCTACTTCCTGCAAGCTG.............................................................................. 26 0 2 2.00 4 4 0 0 0 0 0 0
................................................................................................................................TCCTGCCCACCGTCACCGATGAGGA...... 25 0 3 2.00 6 5 1 0 0 0 0 0
.....................................................................................................................TAAGGTAATGATCCTGCCCACCGTCACC.............. 28 0 3 2.00 6 2 4 0 0 0 0 0
.......................................................................................................TAATAGCCTGGCACTAAGGTAATGATCC............................ 28 0 4 1.75 7 7 0 0 0 0 0 0
...............................................................................................TGATTTGTTAATAGCCTGGCACTAAG...................................... 26 0 4 1.50 6 4 1 0 0 1 0 0
..........................................................................................................TAGCCTGGCACTAAGGTAATGATCC............................ 25 0 4 1.50 6 3 2 0 0 1 0 0
....................................................GAGTATCTCTACCTACTTCCTGC.................................................................................... 23 0 2 1.50 3 3 0 0 0 0 0 0
..................................................................................TTTGTACTAACTATGATTTGTTAATAGCC................................................ 29 0 2 1.50 3 1 2 0 0 0 0 0
.....................................................................................................................TAAGGTAATGATCCTGCCCACCGTC................. 25 0 4 1.50 6 6 0 0 0 0 0 0
....................................................GAGTATCTCTACCTACTTCCTGCAA.................................................................................. 25 0 2 1.50 3 3 0 0 0 0 0 0
...........................TGGCCACTCCTGCCAACTGGACCGTGAG........................................................................................................ 28 0 4 1.50 6 4 2 0 0 0 0 0
...........................TGGCCACTCCTGCCAACTGGACCGT........................................................................................................... 25 0 4 1.50 6 3 3 0 0 0 0 0
..........TGATCGCCTCAAGGTCGTGGCCACTCC.......................................................................................................................... 27 0 4 1.50 6 4 2 0 0 0 0 0
....................................................GGGTATCTCTACCTACTTCCTGCAAGC................................................................................ 27 1 2 1.50 3 0 3 0 0 0 0 0
.............................................................................................................................TGATCCTGCCCACCGTCACCGATGAG........ 26 0 3 1.33 4 4 0 0 0 0 0 0
..........................................................................................................................TAATGATCCTGCCCACCGTCACCGAT........... 26 0 3 1.33 4 1 0 3 0 0 0 0
...................................................................................................................................TGCCCACCGTCACCGATGAGGAGGCCT. 27 0 3 1.33 4 3 1 0 0 0 0 0
.........................CGTGGCCACTCCTGCCAACTGGACCG............................................................................................................ 26 0 4 1.25 5 4 1 0 0 0 0 0
.......................................................................................................TAATAGCCAGGCACTAAGGTAATGA............................... 25 1 4 1.25 5 5 0 0 0 0 0 0
.......................................................................................................TAATAGCCTGGCACTAAGGTAATGATC............................. 27 0 4 1.25 5 5 0 0 0 0 0 0
.GCAGTTGACTGATCGCCTCAAGGTCG.................................................................................................................................... 26 0 6 1.17 7 7 0 0 0 0 0 0
.........................................................TCTCTACCTACTTCCTGCAAGCTGT............................................................................. 25 0 2 1.00 2 1 1 0 0 0 0 0
..........................................................CTCTACCTACTTCCTGCAAGCTGTT............................................................................ 25 0 2 1.00 2 2 0 0 0 0 0 0
....................................................GAGTATCTATACCTACTTCCTGCAAGC................................................................................ 27 1 2 1.00 2 2 0 0 0 0 0 0
..........................................................................................................................TAATGATCCTGCCCACCGTCACCGA............ 25 0 3 1.00 3 3 0 0 0 0 0 0
.......................................................TATCTCTACCTACTTCCTGCAAGCTGT............................................................................. 27 0 2 1.00 2 1 1 0 0 0 0 0
..................................TCCTGCCAACTGGGCCGTGAGTATC.................................................................................................... 25 1 2 1.00 2 0 0 2 0 0 0 0
...............................................................................TGTTTTGTACTAACTATGATTTGTT....................................................... 25 0 2 1.00 2 1 1 0 0 0 0 0
........................................CAACTGGACCGTGAGTATCTCTACC.............................................................................................. 25 0 2 1.00 2 1 1 0 0 0 0 0
...............................................................................................TGATTTGTTAATAGCCTGGCACTAA....................................... 25 0 4 1.00 4 3 1 0 0 0 0 0
....................................................GAGTATCTCTACCTACTTCCTGCAAGCTG.............................................................................. 29 0 2 1.00 2 2 0 0 0 0 0 0
.............................................................................................................................TGATCCTGCCCACCGTCACCGATGAGGA...... 28 0 3 1.00 3 2 1 0 0 0 0 0
..................................TCCTGCCAACTGGACCGTGAGTATCTCT................................................................................................. 28 0 2 1.00 2 2 0 0 0 0 0 0
............................................TGGACCGTGAGTATCTCTACCTACTTCC....................................................................................... 28 0 2 1.00 2 2 0 0 0 0 0 0
.............................................................................................TATGATTTGTTAATAGCCTGGCAC.......................................... 24 0 4 1.00 4 2 2 0 0 0 0 0
..........TGATCGCCTCAAGGTCGTGGCCACTC........................................................................................................................... 26 0 4 1.00 4 2 2 0 0 0 0 0
...............................................ACCGTGAGTATCTCTACCTACTTCC....................................................................................... 25 0 2 1.00 2 2 0 0 0 0 0 0
.................................................CGTGAGTATCTCTACCTACTTCCTGCA................................................................................... 27 0 2 1.00 2 2 0 0 0 0 0 0
...................................................................................................................................TGCCCACCGTCACCGATGAGGAGGC... 25 0 3 1.00 3 3 0 0 0 0 0 0
.......................................................................................ACTAACTATGATTTGTTAATAGCCTGG............................................. 27 0 4 1.00 4 1 0 3 0 0 0 0
...................................................TGAGTATCTCTACCTACTTCCTGCAAGC................................................................................ 28 0 2 1.00 2 1 1 0 0 0 0 0
....................................................GAGTATCTCTACCTACTTCCTTCAAGC................................................................................ 27 1 2 1.00 2 1 1 0 0 0 0 0
....................................................GAGTATCTTTACCTACTTCCTGCAAGC................................................................................ 27 1 2 1.00 2 2 0 0 0 0 0 0
............................................TGGACCGTGAGTATCTCTACCTAC........................................................................................... 24 0 2 1.00 2 2 0 0 0 0 0 0
........................TCGTGGCCACTCCTGCCAACTGGACCG............................................................................................................ 27 0 4 1.00 4 2 2 0 0 0 0 0
.............................................GGACCGTGAGTATCTCTACCTACTTCC....................................................................................... 27 0 2 1.00 2 2 0 0 0 0 0 0
.........................................................TCTCTACCTACTTCCTGCAAGCTG.............................................................................. 24 0 2 1.00 2 1 0 0 0 1 0 0
....................................................GAGTATCTGTACCTACTTCCTGCAAG................................................................................. 26 1 2 1.00 2 2 0 0 0 0 0 0
.............................................................TACCTACTTCCTGCAAGCTGTTTTG......................................................................... 25 0 2 1.00 2 2 0 0 0 0 0 0
.........................CGTGGCCACTCCTGCCAACTGGACC............................................................................................................. 25 0 4 1.00 4 0 4 0 0 0 0 0
TGCAGTTGACTGATCGCCTCAAGGTCGT................................................................................................................................... 28 0 6 0.83 5 4 0 0 1 0 0 0
......TGACTGATCGCCTCAAGGTCGTGG................................................................................................................................. 24 0 5 0.80 4 4 0 0 0 0 0 0
.......GACTGATCGCCTCAAGGTCGTGGC................................................................................................................................ 24 0 5 0.80 4 4 0 0 0 0 0 0
.....TTGACTGATCGCCTCAAGGTCGTGGC................................................................................................................................ 26 0 5 0.80 4 4 0 0 0 0 0 0
..................................................................................................TTTGTTAATAGCCTGGCACTAAGGTA................................... 26 0 4 0.75 3 3 0 0 0 0 0 0
........................TCGTGGCCACTCCTGCCAACTGGACCGT........................................................................................................... 28 0 4 0.75 3 2 1 0 0 0 0 0
.......................................................................................................TAATAGCCTGGCACTAAGGTAAT................................. 23 0 4 0.75 3 3 0 0 0 0 0 0
...........................TGGCCACTCCTGCCAACTGGACCGTG.......................................................................................................... 26 0 4 0.75 3 2 1 0 0 0 0 0
..................TCAAGGTCGTGGCCACTCCTGCCAACT.................................................................................................................. 27 0 4 0.75 3 0 3 0 0 0 0 0
.......GACTGATCGCCTCAAGGTCGTGGCCAT............................................................................................................................. 27 1 4 0.75 3 0 0 3 0 0 0 0
........................TCGTGGCCACTCCTGCCAACTGGACC............................................................................................................. 26 0 4 0.75 3 1 2 0 0 0 0 0
.................................................................................................................................CCTGCCCACCGTCACCGATGAGGAGGCC.. 28 0 3 0.67 2 1 0 1 0 0 0 0
..........................................................................................................................TAATGATCCTGCCCACCGTCACCG............. 24 0 3 0.67 2 2 0 0 0 0 0 0
.......................................................................................................................................CACCGTCACCGATGAGGAGGCCT. 23 0 3 0.67 2 1 1 0 0 0 0 0
.................................................................................................................................CCTGCCCACCGTCACCGCTGAGGAGGCC.. 28 1 3 0.67 2 0 0 2 0 0 0 0
....................................................................................................................................GCCCACCGTCACCGATGAGGAGG.... 23 0 3 0.67 2 2 0 0 0 0 0 0
................................................................................................................................TCCTGCCCACCGTCACCGATGAGG....... 24 0 3 0.67 2 0 2 0 0 0 0 0
.................................................................................................................................CCTGCCCACCGTCACCGATGAGGAG..... 25 0 3 0.67 2 2 0 0 0 0 0 0
....................................................................................TGTACTAACTATGATTTGTTAATAGC................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0
..........TGATCGCCTCAAGGTCGTGGCCAC............................................................................................................................. 24 0 4 0.50 2 2 0 0 0 0 0 0
..............................................................ACCTACTTCCTGCAAGCTGTTTTG......................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
........................TCGTGGCCACTCCCGCCAACTGGAC.............................................................................................................. 25 1 4 0.50 2 0 0 2 0 0 0 0
.......................................................TATCTCTACCTACTTCCTGCAAGC................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0
.................................................................TACTTCCTGCAAGCTGTTTTGTACTAACT................................................................. 29 0 2 0.50 1 0 1 0 0 0 0 0
...............................................................................TGTTTTGTACTAACTATGATTTGT........................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0
TGCAGTTGACTGATCGCCTCAAG........................................................................................................................................ 23 0 6 0.50 3 3 0 0 0 0 0 0
.............................................................TACCTACTTCCTGCAAGCTGTTTTGTAC...................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0
.GCAGTTGACTGATCGCCTCAAGGT...................................................................................................................................... 24 0 6 0.50 3 3 0 0 0 0 0 0
...................................................................................TTGTACTACCTATGATTTGTTAATAGCC................................................ 28 1 2 0.50 1 1 0 0 0 0 0 0
........................................................................TGCAAGCTGTTTTGTACTAACTATGATT........................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0
.................................................TGTGAGTATCTCTACCTACTTCCTGC.................................................................................... 26 1 2 0.50 1 0 1 0 0 0 0 0
...................................................TGAGGATCTCTACCTACTTCCTGCAAGC................................................................................ 28 1 2 0.50 1 1 0 0 0 0 0 0
.........................................................................................................ATAGCCTGGCACTAAGGTAATGA............................... 23 0 4 0.50 2 2 0 0 0 0 0 0
...........................TTGCCACTCCTGCCAACTGGACCGC........................................................................................................... 25 2 4 0.50 2 0 2 0 0 0 0 0
...............................................ACCTTGAGTATCTCTACCTACTTC........................................................................................ 24 1 2 0.50 1 1 0 0 0 0 0 0
....................................................GAGTATCTCTACCTACTTCCTGCAAGT................................................................................ 27 1 2 0.50 1 0 1 0 0 0 0 0
........................TCGTGGCCACTCCTGCCAACTGGACA............................................................................................................. 26 1 4 0.50 2 0 0 2 0 0 0 0
.....................................................................................................................TAAGGTAATGATCCTGCCCACCGTCAC............... 27 0 4 0.50 2 2 0 0 0 0 0 0
TGCAGTTGGCTGATCGCCTCAAGGTCG.................................................................................................................................... 27 1 6 0.50 3 3 0 0 0 0 0 0
.....................................................AGTATCTCTACCTACTTCCTGCAAGCT............................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................................................................TGGCACTAAGGTAATGATCCTGCCCAC..................... 27 0 4 0.50 2 2 0 0 0 0 0 0
.....................................TGCCAACTGGACCGTGCG........................................................................................................ 18 1 4 0.50 2 0 0 2 0 0 0 0
.....................................................AGTATCTCTACCTACTTCCTGAA................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0 0
....................................................GAGTATCTATACCTACTTCCTGCA................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0
...................CAAGGTCGTGGCCACTCCTGCCAAC................................................................................................................... 25 0 4 0.50 2 1 0 0 0 1 0 0
......TGACTGATCGCCTCAAGGTCGTGGCCAC............................................................................................................................. 28 0 4 0.50 2 1 1 0 0 0 0 0
........................TCGTGGCCGCTCCTGCCAACTGGACCG............................................................................................................ 27 1 4 0.50 2 2 0 0 0 0 0 0
..............CGCCTCAAGGTCGTGGCCACTC........................................................................................................................... 22 0 4 0.50 2 0 1 0 0 1 0 0
...................................................................................................................................TGCCCACCGTCACAGATGAGGAGGCC.. 26 1 4 0.50 2 0 0 2 0 0 0 0
.....................................TGCCAACTCGACCGTGAGTATCTCTACC.............................................................................................. 28 1 2 0.50 1 1 0 0 0 0 0 0
..................................TCTTGCCAACTGGACCGTGAGTATC.................................................................................................... 25 1 2 0.50 1 0 0 1 0 0 0 0
..........................................................................................................TAGCCTGGCACTAAGGTAATGATC............................. 24 0 4 0.50 2 1 1 0 0 0 0 0
....................................................GAGTATCTGTACCTACTTCCTGCA................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0
....................................................................................TGTACTAACTATGATTTGTTAGTAGCC................................................ 27 1 2 0.50 1 1 0 0 0 0 0 0
......................................................................................TACTAACTATGATTTGTTAATAGCC................................................ 25 0 4 0.50 2 1 1 0 0 0 0 0
....................................................TAGTATCTCTACCTACTTCCTGCAAGC................................................................................ 27 1 2 0.50 1 1 0 0 0 0 0 0
.................CTCAAGGTCGTGGCCACTCCTGCCAAC................................................................................................................... 27 0 4 0.50 2 2 0 0 0 0 0 0
................................................................CTACTTCCTGCAAGCTGTTTTGTACC..................................................................... 26 1 2 0.50 1 0 1 0 0 0 0 0
..............................................GACCGTGAGTATCTCTACCTACTTCC....................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
.........................................................TCTCTACCAACTTCCTGCAAGCTGTTT........................................................................... 27 1 2 0.50 1 1 0 0 0 0 0 0
..........................................................CTCTACCTACTTCCTGCA................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0
.............TCGCCTCAAGGTCGTGGCCACTCCTGC....................................................................................................................... 27 0 4 0.50 2 2 0 0 0 0 0 0
......................................................GTATCTCTACCTACTTCCTGCAAGC................................................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0
..................................TCCTGCCAACTGGACCGTGAGTAGC.................................................................................................... 25 1 2 0.50 1 0 0 1 0 0 0 0
...................................................TGAGTATCTCTACCTACTTCCTGCAAG................................................................................. 27 0 2 0.50 1 1 0 0 0 0 0 0
....................................................GAGCATCTCTACCTACTTCCTGCAAGC................................................................................ 27 1 2 0.50 1 0 1 0 0 0 0 0
.................................................................TACTTCCTGCAAGCTGTTTTGTACTAAC.................................................................. 28 0 2 0.50 1 1 0 0 0 0 0 0
............................................TGGTCCGTGAGTATCTCTACCTACTTC........................................................................................ 27 1 2 0.50 1 0 1 0 0 0 0 0
..................................TCCTGCCAACTGGCCCGTGAGTATC.................................................................................................... 25 1 2 0.50 1 0 0 1 0 0 0 0
.....................................................................ACCTGCAAGCTGTTTTGTACTAACTATG.............................................................. 28 1 2 0.50 1 1 0 0 0 0 0 0
....................................................GAGTATCTCTACCTACTTCCTGCAGGGC............................................................................... 28 3 2 0.50 1 1 0 0 0 0 0 0
..................................TCCTGCCAACTGGTCCGTGAGTATC.................................................................................................... 25 1 2 0.50 1 0 0 1 0 0 0 0
..........................................................CTCTACCTACTTCCTGCAAG................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0 0
....................................................GAGAATCTCTACCTACTTCCTGCAAGC................................................................................ 27 1 2 0.50 1 1 0 0 0 0 0 0
..................................................................ACTTCCTGCAAGCTGTTTTGTACC..................................................................... 24 1 2 0.50 1 0 1 0 0 0 0 0
.............................................................................................TATGATTTGTTAATAGCCTGGCACTA........................................ 26 0 4 0.50 2 1 1 0 0 0 0 0
....................................................................TTCCTGCAAGCTGTTTTGTACTAACTA................................................................ 27 0 2 0.50 1 1 0 0 0 0 0 0
........................TCGTGGCCACTCCTGCCAACTGGACCGA........................................................................................................... 28 1 4 0.50 2 0 0 2 0 0 0 0
....................................................GACTATCTCTACCTACTTCCTGCAAGC................................................................................ 27 1 2 0.50 1 0 1 0 0 0 0 0
..................................................TCGAGTATCTCTACCTACTTCCTGCA................................................................................... 26 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................AGTACCTCTACCTACTTCCTGCAAGC................................................................................ 26 1 2 0.50 1 1 0 0 0 0 0 0
......................................GCCAACTGGACCGTGAGTATCTCTACC.............................................................................................. 27 0 2 0.50 1 0 1 0 0 0 0 0
..................................TTCTGCCAACTGGACCGTGAGTATCTC.................................................................................................. 27 1 2 0.50 1 0 1 0 0 0 0 0
..........................................................................................AACTATGATTTGTTAATAGCCTGGCAC.......................................... 27 0 4 0.50 2 0 2 0 0 0 0 0
..............................................................ACCTACTTCCTGCAAGCTGTTTTGTA....................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0
.....................................................AGTATCTCAACCTACTTCCTGCAAGC................................................................................ 26 1 2 0.50 1 1 0 0 0 0 0 0
............................................................................AGCTGTTTTGTACTAACTATGATTTGT........................................................ 27 0 2 0.50 1 1 0 0 0 0 0 0
.................................................CGTGAGTATCTGTACCTACTTCC....................................................................................... 23 1 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................GTTAATAGCCTGGCACTAAGGTA................................... 23 0 4 0.50 2 2 0 0 0 0 0 0
......................................................................CCTGCAAGCTGTTTTGTACTAACTATGA............................................................. 28 0 2 0.50 1 1 0 0 0 0 0 0
......................................................GTATCTCTACCTACTTCCTGCAGGC................................................................................ 25 1 2 0.50 1 1 0 0 0 0 0 0
....................AAGGTCGTGGCCACTCCTGCCAAC................................................................................................................... 24 0 4 0.50 2 2 0 0 0 0 0 0
........................TCGTGGCCACTCCTGCCCACTGGAC.............................................................................................................. 25 1 4 0.50 2 0 0 2 0 0 0 0
.......................................................TATCTCTACCTGCTTCCTGCAAGCTG.............................................................................. 26 1 2 0.50 1 1 0 0 0 0 0 0
..........................................................CTCTACCTACTTCCTGCAAGCTGT............................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0
....................................................GAGTATCTCTACCTACTTCCTGCAAGCT............................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................................................TGATTTGTTAATAGCCTGGCACTA........................................ 24 0 4 0.50 2 0 2 0 0 0 0 0
......................................GCCAACTGGACCGTGAGTATCTCTAC............................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0
.....................................................AGTATCTCTACCTACTTCCTGCAAG................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0
.....................................TGCCAACTGGACCGTGAG........................................................................................................ 18 0 4 0.50 2 0 0 2 0 0 0 0
........................................................ATCTCTACCTACTTCCTGCAAGC................................................................................ 23 0 2 0.50 1 1 0 0 0 0 0 0
.....................................................................TCCTGCAAGCTGTTTTGTACTAAC.................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0
...........................TGGCCACTCCTGCCAACTGGACCG............................................................................................................ 24 0 4 0.50 2 1 1 0 0 0 0 0
....................AAGGTCGTGGCCACTCCTGCCAACT.................................................................................................................. 25 0 4 0.50 2 1 1 0 0 0 0 0
..............................................................................CTGTTTTGTACTAACTATGATTTGTT....................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
....................................................GAGTATCTCTACCTACTTCCTGCGAGC................................................................................ 27 1 2 0.50 1 1 0 0 0 0 0 0
........................................CAACTGGACCGTGAGTATCTCTACCTAC........................................................................................... 28 0 2 0.50 1 0 1 0 0 0 0 0
...........................................................TCTACCTACTTCCTGCAAGCTGTTTTG......................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0
...........GATCGCCTCAAGGTCGTGGCCACTC........................................................................................................................... 25 0 4 0.50 2 2 0 0 0 0 0 0
TGCAGTTGTCTGATCGCCTCAAGGTCG.................................................................................................................................... 27 1 6 0.50 3 3 0 0 0 0 0 0
............ATCGCCTCAAGGTCGTGGCCACTCC.......................................................................................................................... 25 0 4 0.50 2 2 0 0 0 0 0 0
....................................................................................TTTACTAACTATGATTTGTTAATAGCCT............................................... 28 1 2 0.50 1 0 1 0 0 0 0 0
....................................................GAGTATCTCTACCTACTTCCTGCAT.................................................................................. 25 1 2 0.50 1 1 0 0 0 0 0 0
......................................................................................TACTAACTATGATTTGTTAATAGCCTGG............................................. 28 0 4 0.50 2 2 0 0 0 0 0 0
.............................................................TACCTACTTCCTGCAAGCTGTTTT.......................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
...........................TGGCCACTGCTGCCAACTGGACCGTGAG........................................................................................................ 28 1 4 0.50 2 2 0 0 0 0 0 0
..............CGCCTCAAGGTCGTGGCCACTCCTGC....................................................................................................................... 26 0 4 0.50 2 2 0 0 0 0 0 0
..........TGATCGCCTCAAGGTCGTGGCC............................................................................................................................... 22 0 5 0.40 2 0 2 0 0 0 0 0
......TGACTGATCGCCTCAAGGTCGTGGCCA.............................................................................................................................. 27 0 5 0.40 2 2 0 0 0 0 0 0
....GTTGACTGATCGCCTCAAGGTCGTGGC................................................................................................................................ 27 0 5 0.40 2 2 0 0 0 0 0 0
.......GACTGATCGCCTCAAGGTCGTGGCC............................................................................................................................... 25 0 5 0.40 2 2 0 0 0 0 0 0
TGCAGTTGACTGATCGCCTCAAGGTCGTG.................................................................................................................................. 29 0 5 0.40 2 0 0 0 2 0 0 0
......TGACTGATCGCCTCAAGGTCGTGGCC............................................................................................................................... 26 0 5 0.40 2 0 1 0 0 1 0 0
................................................................................................................................TCCTGCCCACCGTCACCGATG.......... 21 0 3 0.33 1 1 0 0 0 0 0 0
....................................................................................................................................GCCCACCGTCACCGATGAGGAGGCC.. 25 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................TGCCCACCGGCACCGATGAGGAGGCCA. 27 2 3 0.33 1 0 0 1 0 0 0 0
.............................................................................................................................TGATCCTGCCCACCGTCACCGATGA......... 25 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................TGCCCACCGTCACCGATGAGGAGGCCTA 28 0 3 0.33 1 1 0 0 0 0 0 0
...........................................................................................................................AATGATCCTGCCCACCGTCACC.............. 22 0 3 0.33 1 0 1 0 0 0 0 0
...........................................................................................................................AATGATCCTGCCCACCGTCACCGAT........... 25 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................TGCCCACCGTCACCGATGAGGA...... 22 0 3 0.33 1 0 0 0 0 1 0 0
................................................................................................................................TCCTGCCCACCGTCACCGATGAGGAGG.... 27 0 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................................................CCTGCCCACCGTCACCGATGAC........ 22 1 3 0.33 1 0 0 0 0 0 1 0
.................................................................................................................................CCTGCCCACCGTCACCGATGAGGAGGC... 27 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................TGCCCACCGTCACCGATGAGGAA..... 23 1 3 0.33 1 1 0 0 0 0 0 0
................................................................................................................................TCCTGCCCGCCGTCACCGATGAGGA...... 25 1 3 0.33 1 1 0 0 0 0 0 0
.......................................................................................................................................CACCGTCACCGATGAGGAGGC... 21 0 3 0.33 1 0 0 0 0 1 0 0
..........................................................................................................................TAATGATCCTGCCCACCGTCACCGAC........... 26 1 3 0.33 1 0 1 0 0 0 0 0
...........................................................................................................................AATGATCCTGCCCACCGTCACCGATGAG........ 28 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................TGCCCACCGTCACCGATGAGGAGTC... 25 1 3 0.33 1 1 0 0 0 0 0 0
...........................................................................................................................AATGATCCAGCCCACCGTCACCGATG.......... 26 1 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................TGCCCACCGTCACCGAGGAGGAGGGC.. 26 2 3 0.33 1 0 0 1 0 0 0 0
................................................................................................................................TCCTGCCCACCGTAACCGATGAGGA...... 25 1 3 0.33 1 0 0 1 0 0 0 0
..............................................................................................................................GATCCTGCCCACCGTCACCGATGAG........ 25 0 3 0.33 1 0 1 0 0 0 0 0
..........................................................................................................................TAATGATCTTGCCCACCGTCACCGATG.......... 27 1 3 0.33 1 1 0 0 0 0 0 0
...........................................................................................................................AATGATCCTGCCCACCGTCACCGATG.......... 26 0 3 0.33 1 0 1 0 0 0 0 0
................................................................................................................................TCCTGCCCACCGTCACCGGTGAGGAG..... 26 1 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................TGCCCACCGTCACCGATGAGGAG..... 23 0 3 0.33 1 0 0 0 1 0 0 0
.............................................................................................................................TGATCCTGCCCACCTTCACCGATGAGGA...... 28 1 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................................GGTAATGATCCTGCCCACCGTCACC.............. 25 0 3 0.33 1 0 1 0 0 0 0 0
................................................................................................................................ATCTGCCCACCGTCACCGATGAGGAGGCC.. 29 2 3 0.33 1 0 1 0 0 0 0 0
............................................................................................................................ATGATCCTGCCCACCGTCACCGATGAGG....... 28 0 3 0.33 1 1 0 0 0 0 0 0
.......................................................................................................................................CACCGTCACCGATGAGGAGGCCTA 24 0 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................................................CCTGCCCACCGTCACCGATGAGGA...... 24 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................TGCCCACCGTCACCGATGAGGAGGT... 25 1 3 0.33 1 1 0 0 0 0 0 0
......................................................................................................................AAGGTAATGATCCTGCCCACCGTCACCGA............ 29 0 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................................................CCTGCCCGCCGTCACCGATGAGGAGGCC.. 28 1 3 0.33 1 0 0 1 0 0 0 0
......................................................................................................................AAGGTAATGATCCTGACCACCGTCACC.............. 27 1 3 0.33 1 0 0 1 0 0 0 0
.............................................................................................................................TGATCCTGCCCACCGTCACCGA............ 22 0 3 0.33 1 1 0 0 0 0 0 0
....................................................................................................................................TCCCACCGTCACCGATGAGGAGG.... 23 1 3 0.33 1 1 0 0 0 0 0 0
....GTTGACTGATCGCCTCAAGGT...................................................................................................................................... 21 0 6 0.33 2 0 0 0 1 0 0 1
...........................................................................................................................................GTCACCGATGAGGAGGCC.. 18 0 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................................................TGATCCTGGCCACCGTCACCGATGAGGA...... 28 1 3 0.33 1 1 0 0 0 0 0 0
..........................................................................................................................TAATGATCGTGCCCACCGTCACCGA............ 25 1 3 0.33 1 1 0 0 0 0 0 0
................................................................................................................................TCCTGCCCACCGTCACCGATGAG........ 23 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................TTCCCACCGTCACCGATGAGGAGGCC.. 26 1 3 0.33 1 0 1 0 0 0 0 0
..CAGTTGACTGATCGCCTCAAGGTCG.................................................................................................................................... 25 0 6 0.33 2 1 0 0 1 0 0 0
.............................................................................................................................TTATCCTGCCCACCGTCACCGATGAGG....... 27 1 3 0.33 1 0 1 0 0 0 0 0
..................................................................................................................................CTGCCCACCGTCACCGATGAGG....... 22 0 3 0.33 1 0 1 0 0 0 0 0
...........................................................................................................................AATGATCCTGCCCACCGTCACCGA............ 24 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................TGCCCACCGTCACCGATGAGG....... 21 0 3 0.33 1 0 0 0 0 1 0 0
.....................................................................................................................TAAGGTAATGATCCTGCCCACCGTGACC.............. 28 1 3 0.33 1 0 1 0 0 0 0 0
....................AAGGTCGTGGCCACTCCTGCC...................................................................................................................... 21 0 4 0.25 1 0 0 0 1 0 0 0
.....................................................................................................GTTAATAGCCTGGCACTAAGGTAA.................................. 24 0 4 0.25 1 1 0 0 0 0 0 0
........................TCGGGGCCACTCCTGCCAACTGGACC............................................................................................................. 26 1 4 0.25 1 0 1 0 0 0 0 0
..................................................................................................TTTGTTAATAGCCTGGCACTAAG...................................... 23 0 4 0.25 1 1 0 0 0 0 0 0
......................................................................................................CTAATAGCCTGGCACTAAGGTAATGATC............................. 28 1 4 0.25 1 0 1 0 0 0 0 0
...........GATCGCCTCAAGGTCGTGGCCACT............................................................................................................................ 24 0 4 0.25 1 0 1 0 0 0 0 0
........................TCGTGGCCACTCCGGCCAACTGGAC.............................................................................................................. 25 1 4 0.25 1 0 0 1 0 0 0 0
.................CTCAAGGTCGTGGCCACTCCTGCCAACT.................................................................................................................. 28 0 4 0.25 1 0 1 0 0 0 0 0
..........................GTGGCCACTCCTGCCAACTGGACCGT........................................................................................................... 26 0 4 0.25 1 0 1 0 0 0 0 0
.......................................................................................................TAATAGCCTGGCACTAAGGTAA.................................. 22 0 4 0.25 1 0 1 0 0 0 0 0
...........................TTGCCACTCCTGCCAACTGGACCGT........................................................................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0
..................TGAAGGTCGTGGCCACTCCTGCCAACT.................................................................................................................. 27 1 4 0.25 1 0 1 0 0 0 0 0
.......................................................................................ACTAACTATGATTTGTTAATAGCCTG.............................................. 26 0 4 0.25 1 1 0 0 0 0 0 0
...................................................................................................TTGTTAATAGCCTGGCACTAAGGTAA.................................. 26 0 4 0.25 1 1 0 0 0 0 0 0
........................TCGTGGCCACTCCTGCCAACTTGAC.............................................................................................................. 25 1 4 0.25 1 0 0 1 0 0 0 0
........................................................................................................................GGTAATGATCCTGCCCACCGT.................. 21 0 4 0.25 1 0 0 0 1 0 0 0
...............................................................................................................TGGCACTAAGGTAATGATCCTGCCCACC.................... 28 0 4 0.25 1 0 1 0 0 0 0 0
........................................................................................................AATAGCCTAGCACTAAGGTAATGA............................... 24 1 4 0.25 1 1 0 0 0 0 0 0
................................................................................................GATTTGTTAATAGCCTGGCACTAAGGT.................................... 27 0 4 0.25 1 1 0 0 0 0 0 0
...........................TGGCCACTCCTGCCAACTGGACC............................................................................................................. 23 0 4 0.25 1 0 1 0 0 0 0 0
........................................................................................................AGTAGCCTGGCACTAAGGTAATGA............................... 24 1 4 0.25 1 1 0 0 0 0 0 0
................................................................................................GATTTGTTAATAGCCTGGCACTAAG...................................... 25 0 4 0.25 1 1 0 0 0 0 0 0
..................................................................................................TTTGTTAATAGCCTGGCACTAAGG..................................... 24 0 4 0.25 1 1 0 0 0 0 0 0
...........................TTGCCACTCCTGCCAACTGGACC............................................................................................................. 23 1 4 0.25 1 0 1 0 0 0 0 0
...............................................................................................TGATTTGTGAATAGCCTGGCACTAA....................................... 25 1 4 0.25 1 1 0 0 0 0 0 0
...............................................................................................TGATTTGTTAATAGCCTGGCACTAAGGT.................................... 28 0 4 0.25 1 1 0 0 0 0 0 0
.........................CGTGGCCACTCCTGCAAACTGGACCG............................................................................................................ 26 1 4 0.25 1 0 0 1 0 0 0 0
..................TCAAGGTCGTGGCCACTCCTG........................................................................................................................ 21 0 4 0.25 1 0 0 0 0 1 0 0
....................................................................................................TGTTAATAGCCTGGCACTAAGGTAA.................................. 25 0 4 0.25 1 1 0 0 0 0 0 0
................................................................................................................GGCACTAAGGTAATGATCCTGCCCACC.................... 27 0 4 0.25 1 1 0 0 0 0 0 0
.......................................................................................................TAATAGCCGGGCACTAAGGTAATGAT.............................. 26 1 4 0.25 1 1 0 0 0 0 0 0
....................................................................................................TGTTAATAGCCTGGCACTAAGGTA................................... 24 0 4 0.25 1 1 0 0 0 0 0 0
.........................CGTGGCCACTACTGCCAACTGGACCG............................................................................................................ 26 1 4 0.25 1 0 1 0 0 0 0 0
.............................................................TACCTACTTCCTGCAAGCTGTTT........................................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0
...........................TGGCCACTCCTGCCAACTGGACCCTGAG........................................................................................................ 28 1 4 0.25 1 1 0 0 0 0 0 0
........................................................................................................AATAGCCTTGCACTAAGGTAATGA............................... 24 1 4 0.25 1 1 0 0 0 0 0 0
............ATCGCCTCAAGGTCGTGGCCACTCCT......................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0
..................TCAAGGTCGTGGCTACTCCTGCCAAC................................................................................................................... 26 1 4 0.25 1 0 0 1 0 0 0 0
...........................................................................................ACTATGATTTGTTAATAGCC................................................ 20 0 4 0.25 1 1 0 0 0 0 0 0
...............................CACTCCTGCCAACTGGAC.............................................................................................................. 18 0 4 0.25 1 0 1 0 0 0 0 0
.........................................................................................................ATAGCCTGGCACTAAGGTAATGATC............................. 25 0 4 0.25 1 1 0 0 0 0 0 0
.......................................................................................................TAATAGCCTGGCGCTAAGGTAATGA............................... 25 1 4 0.25 1 1 0 0 0 0 0 0
.......................................................................................................TAATAGCCCGGCACTAAGGTAATGA............................... 25 1 4 0.25 1 1 0 0 0 0 0 0

Anti-sense strand reads

ACGTCAACTGACTAGCGGAGTTCCAGCACCGGTGAGGACGGTTGACCTGGCACTCATAGAGATGGATGAAGGACGTTCGACAAAACATGATTGATACTAAACAATTATCGGACCGTGATTCCATTACTAGGACGGGTGGCAGTGGCTACTCCTCCGGAT
**************************************************..........(((.........(((((......)))))..................)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 GSM1528802
follicle cells		 M056
embryo
 V046
embryo
 V058
head
 V120
male body		 V052
head
.....................................ACGGTTGACCTGGCACTCATAGAGA................................................................................................. 25 0 2 11.00 22 22 0 0 0 0 0 0
.......................................GGTTGACCTGGCACTCATAGAGA................................................................................................. 23 0 2 10.50 21 21 0 0 0 0 0 0
.................................GAGGACGGTTGACCTGGCACTCAT...................................................................................................... 24 0 4 8.00 32 0 32 0 0 0 0 0
......................................CGGTTGACCTGGCACTCATAGAGA................................................................................................. 24 0 2 8.00 16 12 0 4 0 0 0 0
....................................TATGGTTGACCTGGCACTCATAGAGA................................................................................................. 26 2 2 8.00 16 0 16 0 0 0 0 0
....................................TACGGTTGACCTGGCACTCATAGAGA................................................................................................. 26 1 2 7.50 15 5 10 0 0 0 0 0
............................................................................................................CGGACCGTGATTCCATTACTAGGAC.......................... 25 0 4 4.50 18 0 18 0 0 0 0 0
..........................................TGACCTGGCACTCATAGAGATGGAT............................................................................................ 25 0 2 3.50 7 2 0 5 0 0 0 0
......................................................................................ATGATTGATACTAAACAATTATCGGAC.............................................. 27 0 4 2.75 11 11 0 0 0 0 0 0
.......................................GGTTGACCTGGCACTCATAGAG.................................................................................................. 22 0 2 2.00 4 4 0 0 0 0 0 0
.........................................TTGACCTGGCACTCATAGAGATGGAT............................................................................................ 26 0 2 2.00 4 1 0 3 0 0 0 0
...............................................................GGATGAAGGACGTTCGACAAAACAT....................................................................... 25 0 2 2.00 4 2 1 0 0 1 0 0
........................................GTTGACCTGGCACTCATAGAGA................................................................................................. 22 0 2 1.50 3 3 0 0 0 0 0 0
....................................GACGGTTGACCTGGCACTCATAGAGA................................................................................................. 26 0 2 1.50 3 3 0 0 0 0 0 0
...................................GGACGGTTGACCTGGCACTCATAGAGA................................................................................................. 27 0 2 1.50 3 3 0 0 0 0 0 0
.....................................ACGGTTGACCTGGCACTCATAGAGAT................................................................................................ 26 0 2 1.50 3 3 0 0 0 0 0 0
.....................................ACGGTTGACCTGGCACTCATAGAG.................................................................................................. 24 0 2 1.00 2 2 0 0 0 0 0 0
............................................ACCTGGCACTCATAGAGATGGAT............................................................................................ 23 0 2 1.00 2 2 0 0 0 0 0 0
....................................TATGGTTGCCCTGGCACTCATAGAGA................................................................................................. 26 3 2 1.00 2 0 2 0 0 0 0 0
.............................................................................CGACAAAACATGATTGATACTAAACAAT...................................................... 28 0 2 1.00 2 2 0 0 0 0 0 0
...........................................GACCTGGCACTCATAGAGATGGA............................................................................................. 23 0 2 1.00 2 2 0 0 0 0 0 0
...................................................................GAAGGACGTTCGACAAAACAT....................................................................... 21 0 2 1.00 2 1 0 1 0 0 0 0
............................................................................................................CGGACCGTGATGCCATTACTAGGAC.......................... 25 1 4 0.75 3 0 3 0 0 0 0 0
.....................................................................................................................................GGGTGGCAGTGGCTACTCCTCCGGAT 26 0 3 0.67 2 2 0 0 0 0 0 0
......................................................................................................................................GGTGGCAGTGGCTACTCCTCCGGAT 25 0 3 0.67 2 0 0 0 2 0 0 0
.....................................ACGGTTGACCTGTCACTCATAGAGA................................................................................................. 25 1 2 0.50 1 1 0 0 0 0 0 0
..........................................CGACCTGGCACTCATAGAGATGGAT............................................................................................ 25 1 2 0.50 1 0 0 1 0 0 0 0
......................................CGGTTGACCTGGCACTCATAGATA................................................................................................. 24 1 2 0.50 1 0 0 1 0 0 0 0
..............................................................TGGATGAAGGACGTTCGACAAAAC......................................................................... 24 0 2 0.50 1 0 0 1 0 0 0 0
....................................GACGGTTGACCTGGCACTCATAGAGAT................................................................................................ 27 0 2 0.50 1 1 0 0 0 0 0 0
.........................................CTGACCTGGCACTCATAGAGA................................................................................................. 21 1 2 0.50 1 0 0 1 0 0 0 0
....................................TACGGTTGAGCTGGCACTCATAGAGA................................................................................................. 26 2 2 0.50 1 0 1 0 0 0 0 0
............................................................................................................CGGACCGTGATTCCATTGCTAGGAC.......................... 25 1 4 0.50 2 0 2 0 0 0 0 0
......................CCAGCACCGGTGAGGACGGTTGACCT............................................................................................................... 26 0 4 0.50 2 2 0 0 0 0 0 0
.....................................................................AGGACGTTCGACAAAACATGATTGATA............................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0
......................................CGGTTGACCTGGCACTCATAGAG.................................................................................................. 23 0 2 0.50 1 0 0 1 0 0 0 0
....................................GACGGTTGACCTGGCACTCATAGAG.................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................GGATGAAGGACGTTCGACAAAACAC....................................................................... 25 1 2 0.50 1 1 0 0 0 0 0 0
.....................TCCAGCACCGGTGAGGACGGTTGACCT............................................................................................................... 27 0 4 0.50 2 1 0 1 0 0 0 0
........................................GTTGACCTGGCACTCATAGAG.................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0
.........................................TTGACCTGGCACGCATAGAGA................................................................................................. 21 1 2 0.50 1 1 0 0 0 0 0 0
......................................AGGTTGACCTGGCACTCATAGAGG................................................................................................. 24 2 2 0.50 1 1 0 0 0 0 0 0
....................................................................AAGGACGTTCGACAAAACATGATT................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
..............................................................TGGATGAAGGACGTTCGACAAAACA........................................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0
................................................................GGTGAAGGACGTTCGACAAAACATG...................................................................... 25 1 2 0.50 1 1 0 0 0 0 0 0
..........................................TGACCTGGCACTCATAGAG.................................................................................................. 19 0 2 0.50 1 1 0 0 0 0 0 0
...................................GGACGGTTGACCTGGCACTCATAGAGAT................................................................................................ 28 0 2 0.50 1 0 0 1 0 0 0 0
....................................TACGGTTCCCCTGGCACTCATAGAGA................................................................................................. 26 3 2 0.50 1 0 1 0 0 0 0 0
....................................CACGGTTGACCTGGCACTCATAGAGA................................................................................................. 26 1 2 0.50 1 1 0 0 0 0 0 0
......................................CGGTCGACCTGGCACTCATAGAGA................................................................................................. 24 1 2 0.50 1 1 0 0 0 0 0 0
..........................................TGACCTGGCACTCATAGAGAT................................................................................................ 21 0 2 0.50 1 0 0 1 0 0 0 0
................................TGAGGACGGTTGACCTGGCACTCAT...................................................................................................... 25 0 4 0.50 2 2 0 0 0 0 0 0
........................................................................................GATTGATACTAAACAATTATCGGAC.............................................. 25 0 4 0.50 2 2 0 0 0 0 0 0
.............................CGGTGAGGACGGTTGACCTGGCACT......................................................................................................... 25 0 4 0.50 2 2 0 0 0 0 0 0
.....................................TAGGTTGACCTGGCACTCATAGAGA................................................................................................. 25 2 2 0.50 1 1 0 0 0 0 0 0
...................................GGACGGTTGACCTGGCACTCATAGAG.................................................................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0
.....................................ACGGTTGACCTGGCAGTCATAGAG.................................................................................................. 24 1 2 0.50 1 1 0 0 0 0 0 0
.......................................GGTGGACCTGGCACTCATAGAGA................................................................................................. 23 1 2 0.50 1 1 0 0 0 0 0 0
........................................GTTGACCTGGCACTCATAGAGAT................................................................................................ 23 0 2 0.50 1 1 0 0 0 0 0 0
.....................................GCGGTTGACCTGGCACTCATAGAGA................................................................................................. 25 1 2 0.50 1 1 0 0 0 0 0 0
.....................................ACGGTTGACCTGGCACTCATAGATA................................................................................................. 25 1 2 0.50 1 0 0 1 0 0 0 0
..............................GGTGAGGACGGTTGACCTGGCACTCAT...................................................................................................... 27 0 4 0.50 2 0 2 0 0 0 0 0
.....................................ACGGTTGACCTGGCACTCATAGTGAT................................................................................................ 26 1 2 0.50 1 0 0 1 0 0 0 0
......................................CGGTTGACCTGGCACTCATAGAGGT................................................................................................ 25 1 2 0.50 1 0 0 1 0 0 0 0
..................................AGGACGGTTGACCTGGCACTCATAG.................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................................................AGGTGGCAGTGGCTACTCCTCCGGAT 26 1 3 0.33 1 0 0 0 1 0 0 0
.......................................................................................................................................GTGGCAGTGGCTACTCCTCCGGAT 24 0 3 0.33 1 0 0 1 0 0 0 0
......................................................................................................................................TGTGGCAGTGGCTACTCCTCCGGAT 25 1 3 0.33 1 0 0 0 1 0 0 0
......................................................................................................................................GGTGGCAGTGGCTACTTCTCCGGAT 25 1 3 0.33 1 0 0 0 1 0 0 0
.............................................................................................................................TCTAGGACGGGTGGCAGTGGCTACT......... 25 1 3 0.33 1 1 0 0 0 0 0 0
....................................................................................................................................CGGGTGGCAGTGGCTACTTCTCCGGAT 27 1 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................................................TGGCAGTGGCTACTCCTCCGGAT 23 0 3 0.33 1 0 0 1 0 0 0 0
...................................................................................................................................ACGGGTGGCAGTGGCTACTCCT...... 22 0 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................AAACAATTATCGGACCGTGATTCCAT................................... 26 0 4 0.25 1 1 0 0 0 0 0 0
...............CGGAGTTCCAGCACCGGTGAGG.......................................................................................................................... 22 0 4 0.25 1 0 0 1 0 0 0 0
............................................................................................................CGGACCGTGATTCCATTACTAAGAC.......................... 25 1 4 0.25 1 0 1 0 0 0 0 0
................................CGAGGACGGTTGACCTGGCACTCAT...................................................................................................... 25 1 4 0.25 1 0 0 1 0 0 0 0
.....................TCCAGCACCGGTGAGGACGGTTGAC................................................................................................................. 25 0 4 0.25 1 0 0 1 0 0 0 0
............................................................................................................CGGACCGTGATACCATTACTAGGAC.......................... 25 1 4 0.25 1 0 1 0 0 0 0 0
............................................................................................................CGGACCGTGATCCCATTACTAGGAC.......................... 25 1 4 0.25 1 0 1 0 0 0 0 0
...........................................................AGATGGATGAAGGACGTTCGAGA............................................................................. 23 1 4 0.25 1 0 0 1 0 0 0 0
..............................................................................................................GATGGTGATTCCATTACTACG............................ 21 3 4 0.25 1 0 0 0 0 0 0 1
...............................GTGAGGACGGTTGACCTGGCACT......................................................................................................... 23 0 4 0.25 1 0 0 0 1 0 0 0
...........................ACCGGTGAGGACGGTTGACCTGGCAC.......................................................................................................... 26 0 4 0.25 1 0 0 0 0 0 1 0
.................................GAGGACGGTTGACGTGGCACTCAT...................................................................................................... 24 1 4 0.25 1 0 1 0 0 0 0 0
...............................GTGAGGACGGTTGACCTGGCA........................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0
....................................TACGGTTGACCTGGCACTCATATAGA................................................................................................. 26 2 4 0.25 1 0 0 1 0 0 0 0
.........GACTAGCGGAGTTCCAGCACCGGTGAT........................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0
..........................CACCGGTGAGGACGGTTGACCTGGCACT......................................................................................................... 28 0 4 0.25 1 0 0 0 0 0 1 0
..............................GGTGAGGACGGTTGACCTGGCACT......................................................................................................... 24 0 4 0.25 1 0 0 1 0 0 0 0
.................................GAGGCCGGTTGACCTGGCACTCAT...................................................................................................... 24 1 4 0.25 1 0 1 0 0 0 0 0
................................TGAGGACGGTTGACCTGGCACTCA....................................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0 0
............TAGCGGAGTTCCAGCACCGGT.............................................................................................................................. 21 0 5 0.20 1 1 0 0 0 0 0 0
.......CTGACTAGCGGAGTTCCAGCACCGGT.............................................................................................................................. 26 0 5 0.20 1 1 0 0 0 0 0 0
.CGTCAACTGACTAGCGGAG........................................................................................................................................... 19 0 6 0.17 1 1 0 0 0 0 0 0
.............................................................ACGGCTGAAGGACGATCGAC.............................................................................. 20 3 16 0.06 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2L:18944043-18944201 + dya_374 TGCAGTTGACTGATCGCCTCAAGGTCGTGGCCACTCCTGCCAACTGGACCGTGAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCTG---TTTT---GTACT----AAC-TAT-----G------------------AT-TTGTTAATAGCCTGGCACTAAGGTAATGATCCTGCCCACCGTCACCGATGAGGAGGCCTA
droEre2 scaffold_4929:8066061-8066219 + TGCAGCTGACTGATCGCCTCAAGGTCGTGGCCACTCCTGCCAACTGGACCGTGAGTATTTC-----------------------------------T-AC----C-------TACTTAATGGAA-ACTG---TGTC---GTTCT----AAC-TAT-----G------------------AT-TCCTAAATAGCCTGGCACTAAGGTCATGATCCTGCCCTCTGTCACCGATGAGGAGGCCCA
droSec2 scaffold_1:3925646-3925808 + TGCAGCTGACTGATCGCCTCAAGGTGGTGGCCACTCCCGCCAACTGGACCGTAAGTTTCTC-----------------------------------T-AC----C-------CACTTAATGCAA-ACTG---TTCC---GAACTAACTAAT-TCT-----G------------------TT-TCATAAACAGCCTGGCACTAAGGTCATGATCCTGCCCACTGTCACCGATGAGGAGGCTCA
droSim2 2r:7075919-7076081 + TGCAGCTGACTGATCGCCTCAAGGTGGTGGCCACTCCCGCCAACTGGACCGTAAGTTTCTC-----------------------------------T-AC----C-------CACTTAATGCAA-ACTG---TTCC---GAACTAACTAAT-TCT-----G------------------TT-TCATAAACAGCCTGGCACTAAGGTCATGATCCTGCCCAATGTCACCGATGCGGAGGCTCA
dm3 chr2R:6312646-6312808 + TGCAGCTGACTGATCGCCTCAAGGTGGTGGCCACTCCCGCCAACTGGACCGTAAGTTTTTC-----------------------------------T-AC----C-------CACTTAATGCGA-ACTG---TTCC---GAACTAATTAAT-TCT-----G------------------TT-TCATAAACAGCCTGGCACTAAGGTCATGATCCTGCCCACTGTCACCGATGAGGAGGCTCA
droEug1 scf7180000409672:4703406-4703563 + TGCAGCTTACTGATCGTCTCAAGGTGGTGGCCACTCCTGCTAACTGGACTGTAAGTATTTC-----------------------------------T-GC----T-------AACTAAATCCTA-CTGA---ATTC---TTACT----AAT-TGT-----T------------------CG-T-AATTATAGCCTGGCACCAAGGTAATGATCCTGCCCACTGTCACCGATGAAGAAGCCCA
droBia1 scf7180000300451:236-394 + TGCAGCTGACCGATCGCCTCAAGGTGGTGGCCACCCCGGCCAACTGGACGGTGAGTAGTCC-----------------------------------C-AC----T-------TATAAAACAAGA-GACA---ATCC---CTAAT----TGA-TGT-----G------------------AT-CCCCCAACAGCCTGGCACCAAGGTCATGATCCTGCCCACCGTCACCGACGAGGAGGCCCA
droTak1 scf7180000415683:143891-144049 + TTCAGCTGACTGATCGCCTCAAGGTGGTGGCCACTCCAGCCAACTGGACTGTAAGTACTAT-----------------------------------C-CC----C-------GATGGAATTCAA-TTGA---ATCC---CCACT----AAT-CGT-----G------------------CT-TCTTCAATAGCCTGGCACCAAGGTCATGATCCTGCCCACTGTCACCGATGAGGAGGCCCA
droEle1 scf7180000491349:1150598-1150754 + TGCAGCTGACTGATCGCCTCAAGGTGGTGGCCACTCCAGCTAATTGGACTGTGAGTGTTTC-----------------------------------T-GT----T-------GACTAGTTCTTA-CTCA-----TC---TTACT----AAT-TGT-----G------------------CC-TCTTCAACAGCCTGGCACCAAGGTCATGATCCTGCCCACTGTCACCGATGAGGAGGCCCA
droRho1 scf7180000769238:1320-1477 - TGCAGCTGACTGATCGCCTCAAGGTTGTGGCTACTCCAGCCAACTGGACTGTGAGTATT-C-----------------------------------T-GC----T-------TATGAATTCTTA-GTTA---TTCC---CCTCT----AAT-TGT-----G------------------AT-TTTTCTGTAGCCTGGCACCAAGGTCATGATTCTGCCCACTGTCACCGATGAGGAGGCCCA
droFic1 scf7180000454066:1380358-1380515 - TGCAGCTGACTGATCGCCTCCAGGTTGTGGCCACTCCTGCCAATTGGACTGTAAGTAATTC-----------------------------------T-AC----T-------TTTTGAACCCAA-GTTA---GGCC---TTACT----AAT-TAT-----T------------------AT-T-TTTATTAGCCTGGCACCAAGGTCATGATCCTGCCTTCGGTCACCGATGAGGAGGCCCA
droKik1 scf7180000302817:644550-644711 - TGCAGCTGACTGATCGCCTTAAGGTGGTGGCCACTCCAGCCAACTGGACTGTAAGTATTAT-----------------------------------T----------TAGC-CGATTGATT-GA-TGGA---TTCCAGATTACT----GAT-TGT-----T------------------AT-TTTTTGATAGCCTGGAACCAAGGTCATGATCCTGCCCACCGTCACCGATGAAGAGGCCCA
droAna3 scaffold_13266:4766585-4766743 - TCCAGCTGACTGATCGCCTCAAGGTGGTGGCCACCCCCGCCAACTGGACTGTGAGTATCTT-----------------------------------A-GG------------TTGTTACTTCAA-GGGA---ATCC---TTTCT----AAT-TAT-----G------------------ATTTCTTCTCCAGCCTGGCACCAAGGTCATGATCCTTCCCACGGTCTCCGACGAGGAGGCCCA
droBip1 scf7180000395751:578126-578285 + TCCAGTTGACTGATCGCCTCAAGGTGGTGGCTACCCCCGCCAACTGGACTGTGAGTATTTC-----------------------------------A-GA----T-------TGTT-ACTTCAA-GAGA---ATCT---ATTCT----GATTTAT-----G------------------GTTTCTCCTCTAGCCTGGCACCAAGGTCATGATCCTGCCCTCGGTCACCGACGAGGAGGCCCA
dp5 3:7142280-7142447 + TGCAGCTGACGGATCGTCTGAAGGTGGTGGCCACTCCAGCCAACTGGACTGTGAGTATTCG-----------------------------------T-ATAC--C-TGAGCC-AGCTGAGG--------GATCTCC---AAACT----GAT-TGTGATATG------------------TTTTTTCCCCTAGCCCGGCACCAAGGTCATGATCCTGCCCACAGTCACAGACGAGGAGGCTAA
droPer2 scaffold_2:7341726-7341893 + TGCAGCTGACGGATCGTCTGAAGGTGGTGGCCACTCCAGCCAACTGGACTGTGAGTATTCG-----------------------------------T-ATAC--C-TGAGCC-AGCTGAGG--------GATCTCC---AAACT----GAT-TGTGATATG------------------TTTTTTCCCCTAGCCCGGCACCAAGGTCATGATCCTGCCCACAGTCACAGACGAGGAGGCTAA
droWil2 scf2_1100000004822:2483186-2483352 + TGCAGCTGACCGATCGCTTGAAAGTGGTGGCTACTCCAGCCAATTGGACGGTAAGCATCAA---------------------------------CTAC-----TTTTTTGCCCATT--ATT-AAATTG----AGAT---TTAGT----AAC-AGT-----T----------------TGTT-TCTTCTTTAGCCCGGCACCAAAGTCATGATCCTGCCGACTGTCACCGATGAAGAGGCTCA
droVir3 scaffold_12875:16258017-16258186 - TGCAGCTGACCGATCGCTTGAAGGTGGTTGCCACGCCCGCCAACTGGACTGTGAGTATATTATATAATTTTTTTTTTTTTTGGGCTTTCATTAAACGCATACTTTCTGTGCAC------------------------------------------------------------------------ACTGTAGCCCGGCACCAAGGTCATGATCTTGCCAAGCGTCACCGACGAGGAGGCCCA
droMoj3 scaffold_6496:7497088-7497258 + TGCAGCTGACCGATCGCCTAAAGGTGGTTGCCACGCCCGCCAATTGGACTGTAAGTCCCTA---------------------------------ACTC-----TTA-TATTC-TCTGTATG--------GAATTAT---AAACT----CAT-TTCATTATTCT--------------TGCC-ACCACTGTAGCCTGGCACCAAGGTCATGATCTTGCCCTCCGTCACCGACGAAGACGCCCA
droGri2 scaffold_15245:13090969-13091151 - TGCAGTTGACCGATCGCTTGAAGGTGGTTGCCACGCCAGCAAATTGGACAGTGAGTATTAC-----------------------------------T-CT----TA-GATAT-GGCTTATA--------GACTTGC---TAACT----GAT-TTACATACTTATGTATTTCTCTTCTTCTT-CTGACTGTAGCCTGGCACAAAGGTGATGATCCTGCCCAGCGTCAGCGATGCGGATGCCCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TGCAGTTGACTGATCGCCTCAAGGTCGTGGCCACTCCTGCCAACTGGACCGTGAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCTG---TTTT---GTACT----AAC-TAT-----G------------------AT-TTGTTAATAGCCTGGCACTAAGGTAATGATCCTGCCCACCGTCACCGATGAGGAGGCCTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................GAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GC...................................................................................................................27260.0012001081200000000
..........................................................................................................................................................................................TAATAGCCTGGCACTAAGGTAATGA...............................25442.501700169100000000
TGCAGTTGACTGATCGCCTCAAGGTCG.......................................................................................................................................................................................................................27620.001200760310400000
....................................................GAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-G....................................................................................................................26214.0028027100000000
......................................................................................................................................................................................................................TGCCCACCGTCACCGATGAGGAGGCC..26313.00390221100000015
..................................TCCTGCCAACTGGACCGTGAGTATC.......................................................................................................................................................................................25211.5023021000000020
....................................................GAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCA.......................................................................................................................24211.0022022000000000
TGCAGTTGACTGATCGCCTCAAGGT.........................................................................................................................................................................................................................2569.83591321000800017
..................TCAAGGTCGTGGCCACTCCTGCCAAC......................................................................................................................................................................................................2648.25331201000000011
.....................................................AGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GC...................................................................................................................2628.0016015100000000
.....................................TGCCAACTGGACCGTGAGTATCTC-----------------------------------T-AC----C-------..................................................................................................................................2827.501506900000000
......TGACTGATCGCCTCAAGGTCGTGGC...................................................................................................................................................................................................................2556.00300170000200011
...........................................................................................................................................................................................AATAGCCTGGCACTAAGGTAATGA...............................2446.0024024000000000
...................................................................................................................................................................................................................TCCTGCCCACCGTCACCGATGAGGAG.....2635.6717016100000000
...................................................TGAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCA.......................................................................................................................2524.50909000000000
..........................................................................................................................................................................................TAATAGCCTGGCACTAAGGTAATG................................2444.2517017000000000
..................................TCCTGCCAACTGGACCGTGAGTATCTC-----------------------------------..................................................................................................................................................2724.00807010000000
......................................................................................................................................................................................................................TGCCCACCGTCACCGATGAGGAGG....2433.671106230000000
.......................................................................................................................................T---GTACT----AAC-TAT-----G------------------AT-TTGTTAATAGCC................................................2723.50702500000000
.........................................................TCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCTG---TT............................................................................................................2623.50707000000000
.........................................................TCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCTG---TTT...........................................................................................................2723.50705200000000
...............................................................................................................................................T----AAC-TAT-----G------------------AT-TTGTTAATAGCCTGGCAC..........................................2843.251307600000000
........................TCGTGGCCACTCCTGCCAACTGGAC.................................................................................................................................................................................................2543.2513010000000012
......................................................................................................................................................................................................................TGCCCACCGTCACCGATGAGGAGGCCA.2733.00900000000009
.....................................TGCCAACTGGACCGTGAGTATCTC-----------------------------------..................................................................................................................................................2423.00604110000000
......TGACTGATCGCCTCAAGGTCGTGGCCAT................................................................................................................................................................................................................2842.7511000000000011
........................................................................................................................................................TAT-----G------------------AT-TTGTTAATAGCCTGGCACT.........................................2542.751104700000000
TGCAGTTGACTGATCGCCTCAAGGTC........................................................................................................................................................................................................................2662.6716013200010000
.........................................................................................................................................................................................................AAGGTAATGATCCTGCCCACCGTCACC..............2732.67801100000006
................................................................................................................................................................................................................TGATCCTGCCCACCGTCACCGATGAGG.......2732.67806200000000
..........................................................................................................................................................................................TAATAGCCTGGCACTAAGGTAATGAT..............................2642.501009100000000
....................................................................................................................TCCTGCAA-GCTG---TTTT---GTACT----AAC-TA........................................................................................2622.50504010000000
..........................................................................................................................................................T-----G------------------AT-TTGTTAATAGCCTGGCACTAAGG.....................................2742.501009100000000
TGCAGTTGACTGATCGCCTCAAGG..........................................................................................................................................................................................................................2462.0012012000000000
.......................................................TATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCTG---..............................................................................................................2622.00404000000000
...................................................................................................................................................................................................................TCCTGCCCACCGTCACCGATGAGGA......2532.00605100000000
........................................................................................................................................................................................................TAAGGTAATGATCCTGCCCACCGTCACC..............2832.00602400000000
..........................................................................................................................................................................................TAATAGCCTGGCACTAAGGTAATGATCC............................2841.75707000000000
..........................................................................................................................................................T-----G------------------AT-TTGTTAATAGCCTGGCACTAAG......................................2641.50604110000000
.............................................................................................................................................................................................TAGCCTGGCACTAAGGTAATGATCC............................2541.50603210000000
....................................................GAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGC........................................................................................................................2321.50303000000000
.....................................................................................................................................TTT---GTACT----AAC-TAT-----G------------------AT-TTGTTAATAGCC................................................2921.50301200000000
........................................................................................................................................................................................................TAAGGTAATGATCCTGCCCACCGTC.................2541.50606000000000
....................................................GAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-.....................................................................................................................2521.50303000000000
...........................TGGCCACTCCTGCCAACTGGACCGTGAG...........................................................................................................................................................................................2841.50604200000000
...........................TGGCCACTCCTGCCAACTGGACCGT..............................................................................................................................................................................................2541.50603300000000
..........TGATCGCCTCAAGGTCGTGGCCACTCC.............................................................................................................................................................................................................2741.50604200000000
................................................................................................................................................................................................................TGATCCTGCCCACCGTCACCGATGAG........2631.33404000000000
.............................................................................................................................................................................................................TAATGATCCTGCCCACCGTCACCGAT...........2631.33401000000003
......................................................................................................................................................................................................................TGCCCACCGTCACCGATGAGGAGGCCT.2731.33403100000000
.........................CGTGGCCACTCCTGCCAACTGGACCG...............................................................................................................................................................................................2641.25504100000000
..........................................................................................................................................................................................TAATAGCCTGGCACTAAGGTAATGATC.............................2741.25505000000000
.GCAGTTGACTGATCGCCTCAAGGTCG.......................................................................................................................................................................................................................2661.17707000000000
.........................................................TCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCTG---T.............................................................................................................2521.00201100000000
..........................................................CTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCTG---TT............................................................................................................2521.00202000000000
.............................................................................................................................................................................................................TAATGATCCTGCCCACCGTCACCGA............2531.00303000000000
.......................................................TATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCTG---T.............................................................................................................2721.00201100000000
...............................................................................................................................TG---TTTT---GTACT----AAC-TAT-----G------------------AT-TTGTT.......................................................2521.00201100000000
........................................CAACTGGACCGTGAGTATCTC-----------------------------------T-AC----C-------..................................................................................................................................2521.00201100000000
..........................................................................................................................................................T-----G------------------AT-TTGTTAATAGCCTGGCACTAA.......................................2541.00403100000000
....................................................GAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCTG---..............................................................................................................2921.00202000000000
................................................................................................................................................................................................................TGATCCTGCCCACCGTCACCGATGAGGA......2831.00302100000000
..................................TCCTGCCAACTGGACCGTGAGTATCTC-----------------------------------T-................................................................................................................................................2821.00202000000000
............................................TGGACCGTGAGTATCTC-----------------------------------T-AC----C-------TACTTCC...........................................................................................................................2821.00202000000000
........................................................................................................................................................TAT-----G------------------AT-TTGTTAATAGCCTGGCAC..........................................2441.00402200000000
..........TGATCGCCTCAAGGTCGTGGCCACTC..............................................................................................................................................................................................................2641.00402200000000
...............................................ACCGTGAGTATCTC-----------------------------------T-AC----C-------TACTTCC...........................................................................................................................2521.00202000000000
.................................................CGTGAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCA.......................................................................................................................2721.00202000000000
......................................................................................................................................................................................................................TGCCCACCGTCACCGATGAGGAGGC...2531.00303000000000
.............................................................................................................................................ACT----AAC-TAT-----G------------------AT-TTGTTAATAGCCTGG.............................................2741.00401000000003
...................................................TGAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GC...................................................................................................................2821.00201100000000
............................................TGGACCGTGAGTATCTC-----------------------------------T-AC----C-------TAC...............................................................................................................................2421.00202000000000
........................TCGTGGCCACTCCTGCCAACTGGACCG...............................................................................................................................................................................................2741.00402200000000
.............................................GGACCGTGAGTATCTC-----------------------------------T-AC----C-------TACTTCC...........................................................................................................................2721.00202000000000
.........................................................TCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCTG---..............................................................................................................2421.00201010000000
................................................................................................T-AC----C-------TACTTCCTGCAA-GCTG---TTTT---G......................................................................................................2521.00202000000000
.........................CGTGGCCACTCCTGCCAACTGGACC................................................................................................................................................................................................2541.00400400000000
TGCAGTTGACTGATCGCCTCAAGGTCGT......................................................................................................................................................................................................................2860.83504000010000
......TGACTGATCGCCTCAAGGTCGTGG....................................................................................................................................................................................................................2450.80404000000000
.......GACTGATCGCCTCAAGGTCGTGGC...................................................................................................................................................................................................................2450.80404000000000
.....TTGACTGATCGCCTCAAGGTCGTGGC...................................................................................................................................................................................................................2650.80404000000000
....................................................................................................................................................................................T-TTGTTAATAGCCTGGCACTAAGGTA...................................2640.75303000000000
........................TCGTGGCCACTCCTGCCAACTGGACCGT..............................................................................................................................................................................................2840.75302100000000
..........................................................................................................................................................................................TAATAGCCTGGCACTAAGGTAAT.................................2340.75303000000000
...........................TGGCCACTCCTGCCAACTGGACCGTG.............................................................................................................................................................................................2640.75302100000000
..................TCAAGGTCGTGGCCACTCCTGCCAACT.....................................................................................................................................................................................................2740.75300300000000
.......GACTGATCGCCTCAAGGTCGTGGCCAT................................................................................................................................................................................................................2740.75300000000003
........................TCGTGGCCACTCCTGCCAACTGGACC................................................................................................................................................................................................2640.75301200000000
....................................................................................................................................................................................................................CCTGCCCACCGTCACCGATGAGGAGGCC..2830.67201000000001
.............................................................................................................................................................................................................TAATGATCCTGCCCACCGTCACCG.............2430.67202000000000
..........................................................................................................................................................................................................................CACCGTCACCGATGAGGAGGCCT.2330.67201100000000
.......................................................................................................................................................................................................................GCCCACCGTCACCGATGAGGAGG....2330.67202000000000
...................................................................................................................................................................................................................TCCTGCCCACCGTCACCGATGAGG.......2430.67200200000000
....................................................................................................................................................................................................................CCTGCCCACCGTCACCGATGAGGAG.....2530.67202000000000
.......................................................................................................................................T---GTACT----AAC-TAT-----G------------------AT-TTGTTAATAGC.................................................2620.50101000000000
..........TGATCGCCTCAAGGTCGTGGCCAC................................................................................................................................................................................................................2440.50202000000000
..................................................................................................AC----C-------TACTTCCTGCAA-GCTG---TTTT---G......................................................................................................2420.50101000000000
.......................................................TATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GC...................................................................................................................2420.50101000000000
................................................................................................................TACTTCCTGCAA-GCTG---TTTT---GTACT----AAC-T.........................................................................................2920.50100100000000
...............................................................................................................................TG---TTTT---GTACT----AAC-TAT-----G------------------AT-TTGT........................................................2420.50101000000000
TGCAGTTGACTGATCGCCTCAAG...........................................................................................................................................................................................................................2360.50303000000000
................................................................................................T-AC----C-------TACTTCCTGCAA-GCTG---TTTT---GTAC...................................................................................................2820.50101000000000
.GCAGTTGACTGATCGCCTCAAGGT.........................................................................................................................................................................................................................2460.50303000000000
.......................................................................................................................TGCAA-GCTG---TTTT---GTACT----AAC-TAT-----G------------------AT-T...........................................................2820.50101000000000
............................................................................................................................................................................................ATAGCCTGGCACTAAGGTAATGA...............................2340.50202000000000
....................................................GAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GT...................................................................................................................2720.50100100000000
........................TCGTGGCCACTCCTGCCAACTGGACA................................................................................................................................................................................................2640.50200000000002
........................................................................................................................................................................................................TAAGGTAATGATCCTGCCCACCGTCAC...............2740.50202000000000
.....................................................AGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCT..................................................................................................................2720.50101000000000
..................................................................................................................................................................................................TGGCACTAAGGTAATGATCCTGCCCAC.....................2740.50202000000000
...................CAAGGTCGTGGCCACTCCTGCCAAC......................................................................................................................................................................................................2540.50201010000000
......TGACTGATCGCCTCAAGGTCGTGGCCAC................................................................................................................................................................................................................2840.50201100000000
..............CGCCTCAAGGTCGTGGCCACTC..............................................................................................................................................................................................................2240.50200110000000
.............................................................................................................................................................................................TAGCCTGGCACTAAGGTAATGATC.............................2440.50201100000000
............................................................................................................................................TACT----AAC-TAT-----G------------------AT-TTGTTAATAGCC................................................2540.50201100000000
.................CTCAAGGTCGTGGCCACTCCTGCCAAC......................................................................................................................................................................................................2740.50202000000000
........................................................................................................C-------TACTTCCTGCAA-GCTG---TTTT---GTACC----..............................................................................................2620.50100100000000
..............................................GACCGTGAGTATCTC-----------------------------------T-AC----C-------TACTTCC...........................................................................................................................2620.50101000000000
..........................................................CTC-----------------------------------T-AC----C-------TACTTCCTGCA.......................................................................................................................1820.50101000000000
.............TCGCCTCAAGGTCGTGGCCACTCCTGC..........................................................................................................................................................................................................2740.50202000000000
......................................................GTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GC...................................................................................................................2520.50101000000000
...................................................TGAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-G....................................................................................................................2720.50101000000000
................................................................................................................TACTTCCTGCAA-GCTG---TTTT---GTACT----AAC-..........................................................................................2820.50101000000000
..........................................................CTC-----------------------------------T-AC----C-------TACTTCCTGCAA-G....................................................................................................................2020.50101000000000
.................................................................................................................ACTTCCTGCAA-GCTG---TTTT---GTACC----..............................................................................................2420.50100100000000
........................................................................................................................................................TAT-----G------------------AT-TTGTTAATAGCCTGGCACTA........................................2640.50201100000000
...................................................................................................................TTCCTGCAA-GCTG---TTTT---GTACT----AAC-TA........................................................................................2720.50101000000000
........................TCGTGGCCACTCCTGCCAACTGGACCGA..............................................................................................................................................................................................2840.50200000000002
......................................GCCAACTGGACCGTGAGTATCTC-----------------------------------T-AC----C-------..................................................................................................................................2720.50100100000000
....................................................................................................................................................AAC-TAT-----G------------------AT-TTGTTAATAGCCTGGCAC..........................................2740.50200200000000
..................................................................................................AC----C-------TACTTCCTGCAA-GCTG---TTTT---GTA....................................................................................................2620.50100100000000
...........................................................................................................................A-GCTG---TTTT---GTACT----AAC-TAT-----G------------------AT-TTGT........................................................2720.50101000000000
........................................................................................................................................................................................GTTAATAGCCTGGCACTAAGGTA...................................2340.50202000000000
.....................................................................................................................CCTGCAA-GCTG---TTTT---GTACT----AAC-TAT-----G------------------A..............................................................2820.50101000000000
....................AAGGTCGTGGCCACTCCTGCCAAC......................................................................................................................................................................................................2440.50202000000000
..........................................................CTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCTG---T.............................................................................................................2420.50101000000000
....................................................GAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCT..................................................................................................................2820.50101000000000
..........................................................................................................................................................T-----G------------------AT-TTGTTAATAGCCTGGCACTA........................................2440.50200200000000
......................................GCCAACTGGACCGTGAGTATCTC-----------------------------------T-AC----..........................................................................................................................................2620.50100100000000
.....................................................AGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-G....................................................................................................................2520.50101000000000
.....................................TGCCAACTGGACCGTGAG...........................................................................................................................................................................................1840.50200000000002
........................................................ATCTC-----------------------------------T-AC----C-------TACTTCCTGCAA-GC...................................................................................................................2320.50101000000000
....................................................................................................................TCCTGCAA-GCTG---TTTT---GTACT----AAC-..........................................................................................2420.50101000000000
...........................TGGCCACTCCTGCCAACTGGACCG...............................................................................................................................................................................................2440.50201100000000
....................AAGGTCGTGGCCACTCCTGCCAACT.....................................................................................................................................................................................................2540.50201100000000
..............................................................................................................................CTG---TTTT---GTACT----AAC-TAT-----G------------------AT-TTGTT.......................................................2620.50101000000000
........................................CAACTGGACCGTGAGTATCTC-----------------------------------T-AC----C-------TAC...............................................................................................................................2820.50100100000000
...........................................................TC-----------------------------------T-AC----C-------TACTTCCTGCAA-GCTG---TTTT---G......................................................................................................2720.50101000000000
...........GATCGCCTCAAGGTCGTGGCCACTC..............................................................................................................................................................................................................2540.50202000000000
............ATCGCCTCAAGGTCGTGGCCACTCC.............................................................................................................................................................................................................2540.50202000000000
....................................................GAGTATCTC-----------------------------------T-AC----C-------TACTTCCTGCAT-.....................................................................................................................2520.50101000000000
............................................................................................................................................TACT----AAC-TAT-----G------------------AT-TTGTTAATAGCCTGG.............................................2840.50202000000000
................................................................................................T-AC----C-------TACTTCCTGCAA-GCTG---TTTT---.......................................................................................................2420.50101000000000
..............CGCCTCAAGGTCGTGGCCACTCCTGC..........................................................................................................................................................................................................2640.50202000000000
..........TGATCGCCTCAAGGTCGTGGCC..................................................................................................................................................................................................................2250.40200200000000
......TGACTGATCGCCTCAAGGTCGTGGCCA.................................................................................................................................................................................................................2750.40202000000000
....GTTGACTGATCGCCTCAAGGTCGTGGC...................................................................................................................................................................................................................2750.40202000000000
.......GACTGATCGCCTCAAGGTCGTGGCC..................................................................................................................................................................................................................2550.40202000000000
TGCAGTTGACTGATCGCCTCAAGGTCGTG.....................................................................................................................................................................................................................2950.40200000020000
......TGACTGATCGCCTCAAGGTCGTGGCC..................................................................................................................................................................................................................2650.40200110000000
...................................................................................................................................................................................................................TCCTGCCCACCGTCACCGATG..........2130.33101000000000
.......................................................................................................................................................................................................................GCCCACCGTCACCGATGAGGAGGCC..2530.33101000000000
................................................................................................................................................................................................................TGATCCTGCCCACCGTCACCGATGA.........2530.33101000000000
......................................................................................................................................................................................................................TGCCCACCGTCACCGATGAGGAGGCCTA2830.33101000000000
..............................................................................................................................................................................................................AATGATCCTGCCCACCGTCACC..............2230.33100100000000
..............................................................................................................................................................................................................AATGATCCTGCCCACCGTCACCGAT...........2530.33101000000000
......................................................................................................................................................................................................................TGCCCACCGTCACCGATGAGGA......2230.33100010000000
...................................................................................................................................................................................................................TCCTGCCCACCGTCACCGATGAGGAGG....2730.33101000000000
....................................................................................................................................................................................................................CCTGCCCACCGTCACCGATGAC........2230.33110000000000
....................................................................................................................................................................................................................CCTGCCCACCGTCACCGATGAGGAGGC...2730.33101000000000
......................................................................................................................................................................................................................TGCCCACCGTCACCGATGAGGAA.....2330.33101000000000
..........................................................................................................................................................................................................................CACCGTCACCGATGAGGAGGC...2130.33100010000000
.............................................................................................................................................................................................................TAATGATCCTGCCCACCGTCACCGAC...........2630.33100100000000
..............................................................................................................................................................................................................AATGATCCTGCCCACCGTCACCGATGAG........2830.33101000000000
.................................................................................................................................................................................................................GATCCTGCCCACCGTCACCGATGAG........2530.33100100000000
..............................................................................................................................................................................................................AATGATCCTGCCCACCGTCACCGATG..........2630.33100100000000
......................................................................................................................................................................................................................TGCCCACCGTCACCGATGAGGAG.....2330.33100000010000
...........................................................................................................................................................................................................GGTAATGATCCTGCCCACCGTCACC..............2530.33100100000000
...............................................................................................................................................................................................................ATGATCCTGCCCACCGTCACCGATGAGG.......2830.33101000000000
..........................................................................................................................................................................................................................CACCGTCACCGATGAGGAGGCCTA2430.33101000000000
....................................................................................................................................................................................................................CCTGCCCACCGTCACCGATGAGGA......2430.33101000000000
......................................................................................................................................................................................................................TGCCCACCGTCACCGATGAGGAGGT...2530.33101000000000
.........................................................................................................................................................................................................AAGGTAATGATCCTGCCCACCGTCACCGA............2930.33101000000000
................................................................................................................................................................................................................TGATCCTGCCCACCGTCACCGA............2230.33101000000000
....GTTGACTGATCGCCTCAAGGT.........................................................................................................................................................................................................................2160.33200001010000
..............................................................................................................................................................................................................................GTCACCGATGAGGAGGCC..1830.33101000000000
...................................................................................................................................................................................................................TCCTGCCCACCGTCACCGATGAG........2330.33101000000000
..CAGTTGACTGATCGCCTCAAGGTCG.......................................................................................................................................................................................................................2560.33201000010000
.....................................................................................................................................................................................................................CTGCCCACCGTCACCGATGAGG.......2230.33100100000000
..............................................................................................................................................................................................................AATGATCCTGCCCACCGTCACCGA............2430.33101000000000
......................................................................................................................................................................................................................TGCCCACCGTCACCGATGAGG.......2130.33100010000000
....................AAGGTCGTGGCCACTCCTGCC.........................................................................................................................................................................................................2140.25100000010000
........................................................................................................................................................................................GTTAATAGCCTGGCACTAAGGTAA..................................2440.25101000000000
....................................................................................................................................................................................T-TTGTTAATAGCCTGGCACTAAG......................................2340.25101000000000
...........GATCGCCTCAAGGTCGTGGCCACT...............................................................................................................................................................................................................2440.25100100000000
.................CTCAAGGTCGTGGCCACTCCTGCCAACT.....................................................................................................................................................................................................2840.25100100000000
..........................GTGGCCACTCCTGCCAACTGGACCGT..............................................................................................................................................................................................2640.25100100000000
..........................................................................................................................................................................................TAATAGCCTGGCACTAAGGTAA..................................2240.25100100000000
.............................................................................................................................................ACT----AAC-TAT-----G------------------AT-TTGTTAATAGCCTG..............................................2640.25101000000000
......................................................................................................................................................................................TTGTTAATAGCCTGGCACTAAGGTAA..................................2640.25101000000000
...........................................................................................................................................................................................................GGTAATGATCCTGCCCACCGT..................2140.25100000010000
..................................................................................................................................................................................................TGGCACTAAGGTAATGATCCTGCCCACC....................2840.25100100000000
................................................................................................................................................................G------------------AT-TTGTTAATAGCCTGGCACTAAGGT....................................2740.25101000000000
...........................TGGCCACTCCTGCCAACTGGACC................................................................................................................................................................................................2340.25100100000000
................................................................................................................................................................G------------------AT-TTGTTAATAGCCTGGCACTAAG......................................2540.25101000000000
....................................................................................................................................................................................T-TTGTTAATAGCCTGGCACTAAGG.....................................2440.25101000000000
..........................................................................................................................................................T-----G------------------AT-TTGTTAATAGCCTGGCACTAAGGT....................................2840.25101000000000
..................TCAAGGTCGTGGCCACTCCTG...........................................................................................................................................................................................................2140.25100010000000
.......................................................................................................................................................................................TGTTAATAGCCTGGCACTAAGGTAA..................................2540.25101000000000
...................................................................................................................................................................................................GGCACTAAGGTAATGATCCTGCCCACC....................2740.25101000000000
.......................................................................................................................................................................................TGTTAATAGCCTGGCACTAAGGTA...................................2440.25101000000000
................................................................................................T-AC----C-------TACTTCCTGCAA-GCTG---TTT...........................................................................................................2340.25101000000000
............ATCGCCTCAAGGTCGTGGCCACTCCT............................................................................................................................................................................................................2640.25101000000000
.....................................................................................................................................................AC-TAT-----G------------------AT-TTGTTAATAGCC................................................2040.25101000000000
...............................CACTCCTGCCAACTGGAC.................................................................................................................................................................................................1840.25100100000000
............................................................................................................................................................................................ATAGCCTGGCACTAAGGTAATGATC.............................2540.25101000000000
droEre2
TGCAGCTGACTGATCGCCTCAAGGTCGTGGCCACTCCTGCCAACTGGACCGTGAGTATTTC-----------------------------------T-AC----C-------TACTTAATGGAA-ACTG---TGTC---GTTCT----AAC-TAT-----G------------------AT-TCCTAAATAGCCTGGCACTAAGGTCATGATCCTGCCCTCTGTCACCGATGAGGAGGCCCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...AGCTGACTGATCGCCTCAAGGTCGT......................................................................................................................................................................................................................2521.0020000200
.......................................................TATTTC-----------------------------------T-AC----C-------TACTTAATGG........................................................................................................................2011.0010100000
TGCAGCTGACTGATCGCCTCAAGGTCGT......................................................................................................................................................................................................................2820.5010000100
....................................................................................................................................................................................................GCACTAAGGTCATGATCCTG..........................2020.5011000000
..............................................................................................................................................................................................................CATGATCCTGCCCTCTGT..................1820.5010100000
...........GATCGCCTCAAGGTCGTG.....................................................................................................................................................................................................................1820.5011000000
..............................................................................................................................................................................................................CATGATCCTGCCCTCTGTCACC..............2220.5010001000
...........GATCGCCTCAAGGTCGTGGCCACTC..............................................................................................................................................................................................................2520.5010100000
...AGCTGACTGATCGCCTCAAG...........................................................................................................................................................................................................................2020.5010000010
....GCTGACTGATCGCCTCAAGGT.........................................................................................................................................................................................................................2120.5010000010
.....................AGGTCGTGGCCACTCCTGCCAACTGGA..................................................................................................................................................................................................2720.5011000000
...................................................................................................................TTAATGGAA-ACTG---TGTC---GTTC...................................................................................................2120.5010000010
....................AAGGTCGTGGCCACTCCTGC..........................................................................................................................................................................................................2020.5010001000
............................................................................................................................................................................................................GTCATGATCCTGCCCTCTGT..................2020.5010010000
droSec2
TGCAGCTGACTGATCGCCTCAAGGTGGTGGCCACTCCCGCCAACTGGACCGTAAGTTTCTC-----------------------------------T-AC----C-------CACTTAATGCAA-ACTG---TTCC---GAACTAACTAAT-TCT-----G------------------TT-TCATAAACAGCCTGGCACTAAGGTCATGATCCTGCCCACTGTCACCGATGAGGAGGCTCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droSim2
TGCAGCTGACTGATCGCCTCAAGGTGGTGGCCACTCCCGCCAACTGGACCGTAAGTTTCTC-----------------------------------T-AC----C-------CACTTAATGCAA-ACTG---TTCC---GAACTAACTAAT-TCT-----G------------------TT-TCATAAACAGCCTGGCACTAAGGTCATGATCCTGCCCAATGTCACCGATGCGGAGGCTCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......GACTGATCGCCTCAAGGTGGT......................................................................................................................................................................................................................2113.00300200000001000000
......................................................................................................................ATGCAA-ACTG---TTCC---GAACTAA................................................................................................2131.00300000003000000000
....................................................................................................................TAATGCAA-ACTG---TTCC---GAACTAACTAA............................................................................................2711.00100000001000000000
................................................................................................................................................................................................................TGATCCTGCCCAATGTCACCGATGCGGA......2811.00100000001000000000
......................................................................................................................ATGCAA-ACTG---TTCC---GAACTAACTAAT-..........................................................................................2611.00100000001000000000
.......GACTGATCGCCTCAAGGTGG.......................................................................................................................................................................................................................2011.00100100000000000000
.....CTGACTGATCGCCTCAAGGTG........................................................................................................................................................................................................................2111.00100000001000000000
..................................................................................................................CTTAATGCAA-ACTG---TTCC---GAAC...................................................................................................2231.00300003000000000000
......TGACTGATCGCCTCAAGGTGGTGG....................................................................................................................................................................................................................2411.00100000000100000000
....................................................................................................................TAATGCAA-ACTG---TTCC---GAACT..................................................................................................2131.00300000003000000000
......TGACTGATCGCCTCAAGGTGGTGGC...................................................................................................................................................................................................................2511.00100000001000000000
.............................................................................................................................................................................................................................TGTCACCGATGCGGAGGC...1820.50110000000000000000
....................................................................................................................................................................................T-TCATAAACAGCCTGGCACTAAGGT....................................2530.33100000001000000000
...........................................................TC-----------------------------------T-AC----C-------CACTTAATGCAA-ACT..................................................................................................................2130.33100000001000000000
...AGCTGACTGATCGCCTCAAG...........................................................................................................................................................................................................................2040.25101000000000000000
TGCAGCTGACTGATCGCCT...............................................................................................................................................................................................................................1940.25101000000000000000
...AGCTGACTGATCGCCTCAAGG..........................................................................................................................................................................................................................2140.25100000010000000000
TGCAGCTGACTGATCGCCTCT.............................................................................................................................................................................................................................2140.25100000000000001000
dm3
TGCAGCTGACTGATCGCCTCAAGGTGGTGGCCACTCCCGCCAACTGGACCGTAAGTTTTTC-----------------------------------T-AC----C-------CACTTAATGCGA-ACTG---TTCC---GAACTAATTAAT-TCT-----G------------------TT-TCATAAACAGCCTGGCACTAAGGTCATGATCCTGCCCACTGTCACCGATGAGGAGGCTCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................TGCCCACTGTCACCGATGAG........2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000160000000000000000100000000000000000000000000000000000
.......GACTGATCGCCTCAAGGTGGT......................................................................................................................................................................................................................2147.5030000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000030000000000100000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000111100
..........................................................................................................................................................................................................................CACTGTCACCGATGAGGAGGC...2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000
...AGCTGACTGATCGCCTCAAGG..........................................................................................................................................................................................................................2142.75110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000270000000000000000100000000000000000000000000000001000
....GCTGACTGATCGCCTCAAGGT.........................................................................................................................................................................................................................2142.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000010000000000000000010000000000000000000000000000100000000000000000001000
.............................................................................................................................................................................................................TCATGATCCTGCCCACTGTCA................2132.3370000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................CTGCCCACTGTCACCGATGAG........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000
....................................................................................................................................TTCC---GAACTAATTAAT-TCT-----G------------------T..............................................................2141.5060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120001000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000
....................................................................................................................TAATGCGA-ACTG---TTCC---GAACT..................................................................................................2141.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110101000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................ATGCGA-ACTG---TTCC---GAACTAA................................................................................................2141.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................CCCACTGTCACCGATGAGGAGTA...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................CCACTGTCACCGATGAGGAG.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................GTCACCGATGAGGAGGCTCA2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................GTCATGATCCTGCCCACTGTC.................2131.0030000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................ACTGTCACCGATGAGGAGG....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................CCACTGTCACCGATGAGGAGG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................AATGCGA-ACTG---TTCC---GAACTA.................................................................................................2141.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000
..CAGCTGACTGATCGCCTCAAG...........................................................................................................................................................................................................................2141.0040000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000002000
.....................................................................................................................................................................................................................CTGCCCACTGTCACCGATGAGGAG.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.......................................................................................................................................................................................................................GCCCACTGTCACCGATGAGGAGGCTC.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTGACTGATCGCCTCAAGGTG........................................................................................................................................................................................................................2141.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000
............................................................................................................................................................................................................................CTGTCACCGATGAGGAGGC...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
......TGACTGATCGCCTCAAGGTGG.......................................................................................................................................................................................................................2141.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000000000020000000000000000000000000000
...........................................................................................................................A-ACTG---TTCC---GAACTAATTAAT-..........................................................................................2141.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CCGCCAACTGGACCGTAAGTT.........................................................................................................................................................................................2140.7530000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGACTGATCGCCTCAAGGTGGT......................................................................................................................................................................................................................2240.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000002000
.......................................................TTTTTC-----------------------------------T-AC----C-------CACTTAATGCG.......................................................................................................................2140.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000100000000000000000000000000000000000
........................................................................................................................................................................................ATAAACAGCCTGGCACTAAGG.....................................2140.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GACTGATCGCCTCAAGGT.........................................................................................................................................................................................................................1840.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................C-----------------------------------T-AC----C-------CACTTAATGCGA-ACTG---..............................................................................................................2140.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................AACAGCCTGGCACTAAGGTCA..................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....GCTGACTGATCGCCTCAAGGTGGTGG....................................................................................................................................................................................................................2640.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TGCGA-ACTG---TTCC---GAACTAAT...............................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................CTTAATGCGA-ACTG---TTCC---GAA....................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCCTCAAGGTGGTGGCCACT...............................................................................................................................................................................................................2040.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CCAACTGGACCGTAAGTTTTTC-----------------------------------T-................................................................................................................................................2340.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........ACTGATCGCCTCAAGGTGG.......................................................................................................................................................................................................................1940.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..CAGCTGACTGATCGCCTCAA............................................................................................................................................................................................................................2040.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..................TCAAGGTGGTGGCCACTCCCG...........................................................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
TGCAGCTGACTGATCGCCTCC.............................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........CTGATCGCCTCAAGGTGGTGG....................................................................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
TGCAGCTGACTGATCGCCTCAAGGTG........................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
TGCAGCTGACTGATCGCCTCA.............................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...................CAAGGTGGTGGCCACTCCC............................................................................................................................................................................................................1940.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CCTGCCCACTGTCACCGATGA.........2130.3310000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CTGCCCACTGTCACCGAT...........1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TCATGATCCTGCCCACTGTC.................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................................CATGATCCTGCCCACTGTCACC..............2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................ATGATCCTGCCCACTGTCACC..............2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................C-------CACTTAATGCGA-ACTG---TTCC---.......................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
..................................................................................................AC----C-------CACTTAATGCGA-ACTG---TT............................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................CCACTCCCGCCAACTGGACCG...............................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................AACAGCCTGGCACTAAGGTCATGATCC............................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AGCTGACTGATCGCCTCAAG...........................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...................CAAGGTGGTGGCCACTCCCGC..........................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCCTCAAGGTGGTGGCC..................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ACTGGACCGTAAGTTTTTC-----------------------------------T-A...............................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTGACTGATCGCCTCAAGGTGG.......................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................T-TCATAAACAGCCTGGCACTA........................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................TTTC-----------------------------------T-AC----C-------CACTTAATGCG.......................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
..............CGCCTCAAGGTGGTGGCCACTC..............................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AGCTGACTGATCGCCTCAAGGC.........................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GATCGCCTCAAGGTGGTGGCCACTCCC............................................................................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CGCCAACTGGACCGTAAGTTTTTC-----------------------------------T-................................................................................................................................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................CTAAGGTCATGATCCTGCCC.......................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TT-TCATAAACAGCCTGGCACT.........................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................ACTTAATGCGA-ACTG---TTCC---GA.....................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CAGCCTGGCACTAAGGTCA..................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................CAACTGGACCGTAAGTTTTC......................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
........ACTGATCGCCTCAAGGTGGT......................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................C-----------------------------------T-AC----C-------CACTTAATGCGA-ACT..................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........TGATCGCCTCAAGGTGGTGGA...................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CCTGGCACTAAGGTCATGATCCTGCCC.......................2740.2510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GGTGGTGGCCACTCCCGCCAACTGGACC................................................................................................................................................................................................2840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................G---TTCC---GAACTAATTAAT-TCT-----G------------------...............................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCGCCTCAAGGTGGTGGCCAC................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................C----C-------CACTTAATGCGA-ACTG---TTC...........................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TTTC-----------------------------------T-AC----C-------CACTTAATGCGA-.....................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........GATCGCCTCAAGGTGGTGGCC..................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CTCCCGCCAACTGGACCCC..............................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACTGATCGCCTCAAGGTGGTG.....................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GACTGATCGCCTCAAGGTGG.......................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................TTTC-----------------------------------T-AC----C-------CACTTAATGCGA-AC...................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................ACTAATTAAT-TCT-----G------------------TT-TCATA.......................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ACTGGACCGTAAGTTTTTC-----------------------------------..................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droEug1
TGCAGCTTACTGATCGTCTCAAGGTGGTGGCCACTCCTGCTAACTGGACTGTAAGTATTTC-----------------------------------T-GC----T-------AACTAAATCCTA-CTGA---ATTC---TTACT----AAT-TGT-----T------------------CG-T-AATTATAGCCTGGCACCAAGGTAATGATCCTGCCCACTGTCACCGATGAAGAAGCCCASizeHit CountTotal NormTotal
No Reads
droBia1
TGCAGCTGACCGATCGCCTCAAGGTGGTGGCCACCCCGGCCAACTGGACGGTGAGTAGTCC-----------------------------------C-AC----T-------TATAAAACAAGA-GACA---ATCC---CTAAT----TGA-TGT-----G------------------AT-CCCCCAACAGCCTGGCACCAAGGTCATGATCCTGCCCACCGTCACCGACGAGGAGGCCCASizeHit CountTotal NormTotal
No Reads
droTak1
TTCAGCTGACTGATCGCCTCAAGGTGGTGGCCACTCCAGCCAACTGGACTGTAAGTACTAT-----------------------------------C-CC----C-------GATGGAATTCAA-TTGA---ATCC---CCACT----AAT-CGT-----G------------------CT-TCTTCAATAGCCTGGCACCAAGGTCATGATCCTGCCCACTGTCACCGATGAGGAGGCCCASizeHit CountTotal NormTotal
No Reads
droEle1
TGCAGCTGACTGATCGCCTCAAGGTGGTGGCCACTCCAGCTAATTGGACTGTGAGTGTTTC-----------------------------------T-GT----T-------GACTAGTTCTTA-CTCA-----TC---TTACT----AAT-TGT-----G------------------CC-TCTTCAACAGCCTGGCACCAAGGTCATGATCCTGCCCACTGTCACCGATGAGGAGGCCCASizeHit CountTotal NormTotal
No Reads
droRho1
TGCAGCTGACTGATCGCCTCAAGGTTGTGGCTACTCCAGCCAACTGGACTGTGAGTATT-C-----------------------------------T-GC----T-------TATGAATTCTTA-GTTA---TTCC---CCTCT----AAT-TGT-----G------------------AT-TTTTCTGTAGCCTGGCACCAAGGTCATGATTCTGCCCACTGTCACCGATGAGGAGGCCCASizeHit CountTotal NormTotal
No Reads
droFic1
TGCAGCTGACTGATCGCCTCCAGGTTGTGGCCACTCCTGCCAATTGGACTGTAAGTAATTC-----------------------------------T-AC----T-------TTTTGAACCCAA-GTTA---GGCC---TTACT----AAT-TAT-----T------------------AT-T-TTTATTAGCCTGGCACCAAGGTCATGATCCTGCCTTCGGTCACCGATGAGGAGGCCCASizeHit CountTotal NormTotal
No Reads
droKik1
TGCAGCTGACTGATCGCCTTAAGGTGGTGGCCACTCCAGCCAACTGGACTGTAAGTATTAT-----------------------------------T----------TAGC-CGATTGATT-GA-TGGA---TTCCAGATTACT----GAT-TGT-----T------------------AT-TTTTTGATAGCCTGGAACCAAGGTCATGATCCTGCCCACCGTCACCGATGAAGAGGCCCASizeHit CountTotal NormTotal
No Reads
droAna3
TCCAGCTGACTGATCGCCTCAAGGTGGTGGCCACCCCCGCCAACTGGACTGTGAGTATCTT-----------------------------------A-GG------------TTGTTACTTCAA-GGGA---ATCC---TTTCT----AAT-TAT-----G------------------ATTTCTTCTCCAGCCTGGCACCAAGGTCATGATCCTTCCCACGGTCTCCGACGAGGAGGCCCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................CCCACGGTCTCCGACGAGGAG.....2111.001001000
.......GACTGATCGCCTCAAGGTGGT......................................................................................................................................................................................................................2131.003000003
.......GACTGATCGCCTCAAGGT.........................................................................................................................................................................................................................1831.003000003
.........CTGATCGCCTCAAGGTGGTGGCCACCCCC............................................................................................................................................................................................................2930.331010000
............................GGCCACCCCCGCCAACTGGACTCCC.............................................................................................................................................................................................2530.331010000
........ACTGATCGCCTCAAGGTGGTGGCCACC...............................................................................................................................................................................................................2730.331100000
...........GATCGCCTCAAGGTGGTGGCCACCCCC............................................................................................................................................................................................................2730.331010000
......................GGTGGTGGCCACCCCCGCCAACT.....................................................................................................................................................................................................2330.331010000
.........................................................................................................................................................................................................AAGGTCATGATCCTTCCCACGGT..................2330.331010000
droBip1
TCCAGTTGACTGATCGCCTCAAGGTGGTGGCTACCCCCGCCAACTGGACTGTGAGTATTTC-----------------------------------A-GA----T-------TGTT-ACTTCAA-GAGA---ATCT---ATTCT----GATTTAT-----G------------------GTTTCTCCTCTAGCCTGGCACCAAGGTCATGATCCTGCCCTCGGTCACCGACGAGGAGGCCCASizeHit CountTotal NormTotal
No Reads
dp5
TGCAGCTGACGGATCGTCTGAAGGTGGTGGCCACTCCAGCCAACTGGACTGTGAGTATTCG-----------------------------------T-ATAC--C-TGAGCC-AGCTGAGG--------GATCTCC---AAACT----GAT-TGTGATATG------------------TTTTTTCCCCTAGCCCGGCACCAAGGTCATGATCCTGCCCACAGTCACAGACGAGGAGGCTAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............GTCTGAAGGTGGTGGCCACTCCAGC..........................................................................................................................................................................................................2511.0010000100000
............ATCGTCTGAAGGTGGTGGCCACTCC.............................................................................................................................................................................................................2511.0010010000000
............................GGCCACTCCAGCCAACTGGAC.................................................................................................................................................................................................2111.0010010000000
...............................................................................................................................................................................................................................TCACAGACGAGGAGGCTA.1811.0010000100000
.....CTGACGGATCGTCTGAAGGTGGTGGC...................................................................................................................................................................................................................2611.0010010000000
............ATCGTCTGAAGGTGGTGGCCACT...............................................................................................................................................................................................................2311.0010000100000
...................................................................................................................................................................................................GGCACCAAGGTCATGATC.............................1811.0010000100000
.GCAGCTGACGGATCGTCTG..............................................................................................................................................................................................................................1911.0010100000000
..........GGATCGTCTGAAGGTGGTGGC...................................................................................................................................................................................................................2111.0010000100000
..............CGTCTGAAGGTGGTGGCCACTCC.............................................................................................................................................................................................................2311.0010100000000
.............................................................................................................................................................................................................................AGTCACAGACGAGGAGGCT..1911.0010010000000
................................................................................................................................................................................................................................CACAGACGAGGAGGCTAA1811.0010000100000
.....................................................................................................................................................................................................CACCAAGGTCATGATCCTGCC........................2111.0010010000000
...............GTCTGAAGGTGGTGGCCACTCC.............................................................................................................................................................................................................2211.0010010000000
......TGACGGATCGTCTGAAGGTGGTGGCC..................................................................................................................................................................................................................2611.0010100000000
.......GACGGATCGTCTGAAGGTGGTGGCC..................................................................................................................................................................................................................2511.0010000000010
..............CGTCTGAAGGTGGTGGCCACTCCAGCC.........................................................................................................................................................................................................2711.0010000001000
......TGACGGATCGTCTGAAGGTGGTGGCCA.................................................................................................................................................................................................................2711.0010000100000
droPer2
TGCAGCTGACGGATCGTCTGAAGGTGGTGGCCACTCCAGCCAACTGGACTGTGAGTATTCG-----------------------------------T-ATAC--C-TGAGCC-AGCTGAGG--------GATCTCC---AAACT----GAT-TGTGATATG------------------TTTTTTCCCCTAGCCCGGCACCAAGGTCATGATCCTGCCCACAGTCACAGACGAGGAGGCTAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....GCTGACGGATCGTCTGAAGGTGGTGGCC..................................................................................................................................................................................................................2811.001000001
droWil2
TGCAGCTGACCGATCGCTTGAAAGTGGTGGCTACTCCAGCCAATTGGACGGTAAGCATCAA---------------------------------CTAC-----TTTTTTGCCCATT--ATT-AAATTG----AGAT---TTAGT----AAC-AGT-----T----------------TGTT-TCTTCTTTAGCCCGGCACCAAAGTCATGATCCTGCCGACTGTCACCGATGAAGAGGCTCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......GACCGATCGCTTGAAAGTGGT......................................................................................................................................................................................................................2121.50300210
...........................................................................................................................................................................................................AGTCATGATCCTGCCGACTGTCACC..............2521.00220000
.....................................................................................................................................................................................................CACCAAAGTCATGATCCTGCCGACTG...................2621.00220000
.......GACCGATCGCTTGAAAGT.........................................................................................................................................................................................................................1821.00210010
.....................................................................................................................................GAT---TTAGT----AAC-AGT-----T----------------TGTT-TCT.........................................................2220.50100010
.........................................................................................................................................................................................................................CGACTGTCACCGATGAAGA......1920.50100010
............................................................................................................................................................................................................................CTGTCACCGATGAAGAGG....1820.50100010
................................................................................................................................................................................................................TGATCCTGCCGACTGTCA................1820.50110000
.............................................................................................................................................................................................................................TGTCACCGATGAAGAGGC...1820.50100001
...........................................................................................................................................................................................................AGTCATGATCCTGCCGAC.....................1820.50110000
........................................................................................................................................................................................................................CCGACTGTCACCGATGAAGAGGC...2320.50100001
...AGCTGACCGATCGCTTGAAAG..........................................................................................................................................................................................................................2120.50101000
..........................................................................................................................................................................................................................GACTGTCACCGATGAAGA......1820.50100010
....................................................................................................................................................................................................................CCTGCCGACTGTCACCGATGAAGAGGCTC.2920.50110000
....................................................................................................................................................................................................................CCTGCCGACTGTCACCGATGAAGAGG....2620.50110000
......TGACCGATCGCTTGAAAGTGGT......................................................................................................................................................................................................................2220.50100100
..................TGAAAGTGGTGGCTACTCCAGCCA........................................................................................................................................................................................................2420.50100010
..........................................................................................................................................................................................................................GACTGTCACCGATGAAGAGGC...2120.50100001
....GCTGACCGATCGCTTGAAAGTGG.......................................................................................................................................................................................................................2320.50110000
.........................................................................................................................................................................................................AAAGTCATGATCCTGCCG.......................1820.50110000
............................................................................................................................................................................................................................CTGTCACCGATGAAGAGGC...1920.50100010
....GCTGACCGATCGCTTGAAAGTGGT......................................................................................................................................................................................................................2420.50100100
.........................................................................................................................................................................................................................CGACTGTCACCGATGAAGAGG....2120.50100010
droVir3
TGCAGCTGACCGATCGCTTGAAGGTGGTTGCCACGCCCGCCAACTGGACTGTGAGTATATTATATAATTTTTTTTTTTTTTGGGCTTTCATTAAACGCATACTTTCTGTGCAC------------------------------------------------------------------------ACTGTAGCCCGGCACCAAGGTCATGATCTTGCCAAGCGTCACCGACGAGGAGGCCCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......GACCGATCGCTTGAAGGTGGT......................................................................................................................................................................................................................2114.004000000000400000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................AAGCGTCACCGACGAGGA......1812.002001001000000000000000000000000000000000000000000000000000000000
...AGCTGACCGATCGCTTGAAGGTGGT......................................................................................................................................................................................................................2512.002000000000001000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................AAGCGTCACCGACGAGGAGGCCCA2412.002000000000000000000000000000000000000000000000000000000000000002
....GCTGACCGATCGCTTGAAGGT.........................................................................................................................................................................................................................2112.002000000010000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................TGCCAAGCGTCACCGACGAGGA......2212.002000000000000000000000000000002000000000000000000000000000000000
.......................................................................................................................................................................................................................GCCAAGCGTCACCGACGAGGA......2112.002000000000001000000000000000000000000000000000000000000000000010
..........CGATCGCTTGAAGGTGGTTGCCACGCCCGCCAAC......................................................................................................................................................................................................3411.001000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................TTGCCAAGCGTCACCGACGAGGA......2311.001000000000000000001000000000000000000000000000000000000000000000
................................ACGCCCGCCAACTGGACT................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000001000000000000000
.......GACCGATCGCTTGAAGGTG........................................................................................................................................................................................................................1911.001000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................AAGCGTCACCGACGAGGAGGC...2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................CTTGCCAAGCGTCACCGACGAGGA......2411.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GATCTTGCCAAGCGTCACCGACG..........2311.001100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GCCAAGCGTCACCGACGAGGAGGCCC.2611.001000000000000000100000000000000000000000000000000000000000000000
.GCAGCTGACCGATCGCTTGAAGGT.........................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................CAAGGTCATGATCTTGCCAAGCGT..................2411.001001000000000000000000000000000000000000000000000000000000000000
.................TTGAAGGTGGTTGCCACGCCCGCCAAC......................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000001
...............................CACGCCCGCCAACTGGACTGT..............................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000100000000000
............ATCGCTTGAAGGTGGTTGCCACGC..............................................................................................................................................................................................................2411.001000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................GTCATGATCTTGCCAAGC....................1811.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................AAGCGTCACCGACGAGGAGGCCC.2311.001000000000000000100000000000000000000000000000000000000000000000
...AGCTGACCGATCGCTTGAAGGTGGTT.....................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
..............CGCTTGAAGGTGGTTGCCACGC..............................................................................................................................................................................................................2211.001000000000000000000000000000000000010000000000000000000000000000
..............CGCTTGAAGGTGGTTGCCACGCC.............................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......GACCGATCGCTTGAAGGT.........................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................CAAGCGTCACCGACGAGGAGGCC..2311.001000000000000000000100000000000000000000000000000000000000000000
...AGCTGACCGATCGCTTGAAGGT.........................................................................................................................................................................................................................2211.001000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................ATGATCTTGCCAAGCGTCACCGACGAG........2711.001000000000000000010000000000000000000000000000000000000000000000
droMoj3
TGCAGCTGACCGATCGCCTAAAGGTGGTTGCCACGCCCGCCAATTGGACTGTAAGTCCCTA---------------------------------ACTC-----TTA-TATTC-TCTGTATG--------GAATTAT---AAACT----CAT-TTCATTATTCT--------------TGCC-ACCACTGTAGCCTGGCACCAAGGTCATGATCTTGCCCTCCGTCACCGACGAAGACGCCCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................TTCATTATTCT--------------TGCC-ACCACTGT....................................................2311.001000010
...............GCCTAAAGGTGGTTGCCAC................................................................................................................................................................................................................1911.001000010
droGri2
TGCAGTTGACCGATCGCTTGAAGGTGGTTGCCACGCCAGCAAATTGGACAGTGAGTATTAC-----------------------------------T-CT----TA-GATAT-GGCTTATA--------GACTTGC---TAACT----GAT-TTACATACTTATGTATTTCTCTTCTTCTT-CTGACTGTAGCCTGGCACAAAGGTGATGATCCTGCCCAGCGTCAGCGATGCGGATGCCCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................CCTGCCCAGCGTCAGCGAT...........1920.50110
........................................................................................................................................................................................................AAAGGTGATGATCCTGCCCAGCGTCAGC..............2820.50110
...................GAAGGTGGTTGCCACGCC.............................................................................................................................................................................................................1840.25110

Generated: 05/17/2015 at 10:22 PM