ID:

dya_371

 Coordinate:

2L:18796043-18796193 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-1.7 -1.3 -1.3

Flybase annnotation

exon [dyak_GLEANR_3125:2]; CDS [Dyak\GE19352-cds]; intron [Dyak\GE19352-in]

Repeatable elements

NameClassFamilyStrand
(CAGAGA)nSimple_repeatSimple_repeat+
mature
  1. 2L:18795477-18795501 +
  2. dya_371  2L:18796089-18796113 +
star
  1. 2L:18795516-18795535 +
  2. dya_371  2L:18796128-18796147 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAAAAAAAGAAGAAGAACACAAATGGACTTGGGTACGGATGCCAGCCGGTTGATTGCTCGGCCGGATGATGGGATGAGCAGCACCAGCACCACCACGGCAGACAGGAGCGAGACGGAAGCGGAAACGGAAACAGAGACGGAGAGAGAGGGCGAGCAGAGTCGTGAGAGCACACCTGTTAACGCCAACCCGACGCTCGCCAGTTCGCAGTCTTCGCTGCTGAGCGCCCCAACGCCGACGCCGACGCCGACGC
************************************************************************************************.((.........((.........((....))..........))..........))....************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V120
male body		 V058
head
 M056
embryo
 M026
head
 V046
embryo
 V052
head
.......AGAAGAAGAACCCCCATGGAC............................................................................................................................................................................................................................... 21 3 4 1.00 4 0 0 2 0 2 0 0
...........................................................................................................................AACGGAAACAGAGACTGAGA............................................................................................................ 20 1 3 0.67 2 0 0 0 2 0 0 0
........................................GCCAGCCGGTTGATTGCTC................................................................................................................................................................................................ 19 0 2 0.50 1 1 0 0 0 0 0 0
................................................................................................GGCAGACAGGAGCGAGACGGAAGCG.................................................................................................................................. 25 0 2 0.50 1 0 0 0 0 0 1 0
.......................................................................................................................................GACGGAGAGAGAGGGCGAGC................................................................................................ 20 0 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................CAGGAGCGAGACGGAAGC................................................................................................................................... 18 0 2 0.50 1 0 0 0 0 1 0 0
...................................................................................................................................................................AAGAGCACACCTGTTAACGC.................................................................... 20 1 2 0.50 1 0 1 0 0 0 0 0
...................................................................................................................................................GGGCGAGCAGAGTCGTGAGAGC.................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0
.................................................................................................................................................................................TAACGCCAACCCGACGCTCGCCA................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................................................................GGCGAGCAGAGTCGTGAG..................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0
...................................................................................................AGACAGGAGCGAGACGGTAGC................................................................................................................................... 21 1 2 0.50 1 0 0 1 0 0 0 0
.................................................................................................................CGGAAGCGGAAACGGAAACA...................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0
.................................................................................................................................AACAGAGACGGAGAGAGAGGG..................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0
..............................................................................................................................................................GTCGTGAGAGCACACCTGTT......................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0
..........................................................................................................................AAACGGAAACAGAGACGGAGA............................................................................................................ 21 0 2 0.50 1 0 1 0 0 0 0 0
...............................................................................................................................................GAGAGGGCGAGCAGAGTCGT........................................................................................ 20 0 2 0.50 1 0 1 0 0 0 0 0
..........................................................................................................................................................................CACCTGTTAACGCCAACCCGACGCTC....................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
.....................................GATGCCAGCCGGTTGATTGCT................................................................................................................................................................................................. 21 0 2 0.50 1 0 1 0 0 0 0 0
..................................................................................................................................ACAGAGACGGAGAGAGAGGGC.................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................................................................GGCGAGCAGAGTCGTGAGAGC.................................................................................. 21 0 2 0.50 1 0 1 0 0 0 0 0
......................................ATGCCAGCCGGTTGATTGCT................................................................................................................................................................................................. 20 0 2 0.50 1 0 1 0 0 0 0 0
...................................................................................................................................................................GAGAGCACACCTGTTAACGC.................................................................... 20 0 2 0.50 1 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................GCGCCCCAACGCCGACGCCGACGC...... 24 0 2 0.50 1 0 0 0 0 0 1 0
................................................GTTGATTGCTCGGCCGGAT........................................................................................................................................................................................ 19 0 2 0.50 1 1 0 0 0 0 0 0
.......................................................................................CACCACCACGGCAGACAGGAGCGAGAC......................................................................................................................................... 27 0 2 0.50 1 0 0 1 0 0 0 0
......................................................................................................................................AGACGGAGAGAGAGGGCGAGC................................................................................................ 21 0 2 0.50 1 0 1 0 0 0 0 0
.................................................................................................................................................GAGGGCTAGCAGAGTCGTGAGAGC.................................................................................. 24 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................................................................................GAGCACACCCGGTAGCGCCA.................................................................. 20 3 4 0.25 1 0 0 0 0 0 0 1
.................................................................................................................CGGAAGCGGAAACGGAAAC....................................................................................................................... 19 0 7 0.14 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................CTTGTTCCCAGTCTTCGCTG.................................. 20 3 9 0.11 1 1 0 0 0 0 0 0
..............................................................................................................................................AGACAGGGCGAGCAGGGACG......................................................................................... 20 3 10 0.10 1 0 0 1 0 0 0 0
....................................................................................................................................AGAGACGGGGAGTGACGGC.................................................................................................... 19 3 17 0.06 1 0 0 1 0 0 0 0

Anti-sense strand reads

GTTTTTTTCTTCTTCTTGTGTTTACCTGAACCCATGCCTACGGTCGGCCAACTAACGAGCCGGCCTACTACCCTACTCGTCGTGGTCGTGGTGGTGCCGTCTGTCCTCGCTCTGCCTTCGCCTTTGCCTTTGTCTCTGCCTCTCTCTCCCGCTCGTCTCAGCACTCTCGTGTGGACAATTGCGGTTGGGCTGCGAGCGGTCAAGCGTCAGAAGCGACGACTCGCGGGGTTGCGGCTGCGGCTGCGGCTGCG
************************************************************************************************.((.........((.........((....))..........))..........))....************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V058
head
 M026
head
.....................................................................................TCGTGTTGGTGCGGTCTGTGC................................................................................................................................................. 21 3 4 0.25 1 1 0 0
......TTCTTCTCCTTGTGTTTTCCGG............................................................................................................................................................................................................................... 22 3 4 0.25 1 0 1 0
......................................................................................CGTGTTGGTGCGGTCTGTGC................................................................................................................................................. 20 3 6 0.17 1 1 0 0
...........................................................................................................................................................................................GAATGAGAGCGGTCAAGCGT............................................ 20 3 7 0.14 1 1 0 0
.........................................................................................................................................................................................TGGGCTGCGGGGGGTCCAG............................................... 19 3 8 0.13 1 0 1 0
............................................................................................................................................................................................GATGAGAGCGCTCAAGCGT............................................ 19 3 8 0.13 1 1 0 0
........................................................................................................CCTCGCTCGGCCGTTGCCT................................................................................................................................ 19 3 20 0.05 1 1 0 0
...................................................................................................................................................CGCGCTCGTCTCAGAAGTC..................................................................................... 19 3 20 0.05 1 1 0 0
...................................................................................................................................................................................................GCGGTCAAGCGTCCGAGGT..................................... 19 3 20 0.05 1 1 0 0
..............................................................................................................................................................................................TGAGAGCGCTCAAGCGTCG.......................................... 19 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2L:18795993-18796243 + dya_371 CAAAAAAAGAAGAAGAACACAAATGGACTTGGGTACGGATGCCAGCCGGTTGAT----------------------TGCTCGGCCGGATGATGGGATGAGCAGCACCAGCACCACCA---------CGGCAGACAG-----GAGCGAGACGG------------AAGCGGAAACG------------GAAACAGAGACGGA------GAGA----------GA-------------------G--GGCGA------GCAGAGTCGTGAGAGCACACCTGTTAAC---GCCAACCCGACGCTCG----------------------------------------------CCAGTT---CGCAGTCTTCGCTGCTGAGCGCCCCAACGCCGACGCCGACGC------------------CGACGC
droEre2 scaffold_4929:8206267-8206512 - -----------------------TGGATTTGGATACGGATGCCAGCCGCTTGAT----------------------TGCTCGACCGGATGATGAGATGAGCAGCACTAGTACCACCA---------CGGCAGACAG-----GAGTGAGACGG------------AAGCGGAAACG------------GAAACGGAGACGGA------CAGA----------GA-------------------G--GGCGA------GCAGAGTCGCGAGAGCACACCTGTTAAC---GCCAACCCGACGCTCG----------------------------------------------CCAGTT---CGCAGTCTTCGCTGCTGAGCGCTGCAACGTTGACGCCGACGCCTACGACGACGCCGACGACGACGC
droSec2 scaffold_1:3776205-3776427 + -----------------------TGGACTTGGATACGGATGCCAGTCGGTTGAT----------------------TGCTCGGCCGGACGATGAGATGAGCAGCACAAGTACCACCA---------CTGCAGACAG-----GAGCGAGACGG------------AAGCGGAAACG------------GAAACGGAGACGGA------GAGA----------GA-------------------G--GGCGA------GCAGAGTCGCGAGAGCACACCTGTTAAC---GCCAACCCGACGCTCA----------------------------------------------CCAGTT---CGCAGTCTTCGCTGCTGAGCGCCGCAACGCCGACGTCGACGC------------------C-----
droSim2 2r:6937310-6937532 + -----------------------TGGACTTGGATACGGATGCCAGTCGGTTGAT----------------------TGCTCGGCCGGACGATGAGATGAGCAGCACTAGTACCACCA---------CTGCAGACAG-----GAGCGAGACGG------------AAGCGGAAACG------------GAAACGGAGACGGA------GAGA----------GA-------------------G--GGCGA------GCAGAGTCGCGAGAGCACACCTGTTAAC---GCCAACCCGACGCTCG----------------------------------------------CCAGTT---CGCAGTCTTCGCTGCTGAGCGCCGCAACGCCGACGCCGACGC------------------C-----
dm3 chr2R:6168829-6169066 + -------------AGAGCCCTCGTAGACTTGGATACGGATGCCAGTCGGTTGAT----------------------TGCTCGGCCGGATGATGAGATGAGCAGCACTAGTACCACTA---------CTGCAGACAG-----GAGCGAGACGG------------AAGCGGAAACG------------GAAACGGAGACGGA------GAGA----------GA-------------------G--GGCGA------GCAGAGTCGCGAGAGCACACCTGTTAAC---GCCAACCCGACGCTCG----------------------------------------------CCAGTT---CGCAGTCTTCGCTGCTGAGCGCCGCAACGCCGACGCCGACGC------------------CGACGC
droEug1 scf7180000409209:10381-10608 - -----------------------TGGATTTGGATACAGACGCGACTCGGTTGAT----------------------TCTACGGCCGGATGATGAAATGAGCAGCACAAGCACTACGA---------CACTAGACAG-----GAGTGAGACGG------------AACCGGAAACG------------GAAACGGAGACGGA------AAGA----------GA-------------------G--GCCGA------GGAGAGCCGTGAGAGCACACCTGTTAAT---GTTAACCCAACGCATA----------------------------------------------CTAGTT---CGCTTTCTTCGCTGCTGAGCGCGGCAACGCCGACGCCGACGC------------------CCACGC
droBia1 scf7180000301754:157384-157645 - -------------AGGGCTCTGGTGGATCTGGATACGGATGCCAGTCGCTTGAT----------------------TCTACGGCCGGATGATGAGATGAGCAGCACCAGCACCACGA---------CGGCGGAGCG-----GAGCGAGACGG------------AAGCGGAAACG------------GAAACGGAGACGGA------GAGA----------GAGGGTGAGGACGGG---AGGGAGGCCGA------GGAGAGTCGCGAGAGCACACCTGTTAAC---------CCGACAATTG----------------------------------------------CCAGTT---CGCTTTCCTCGCTGCTGAGCGCCGCTACGCCGACGCCGACGCCA------ACGCCGACCGCGACGC
droTak1 scf7180000415363:33662-33898 - -----------------------TGGATTTGGATACGGATGCCAGCCGTCTGAT----------------------CCTCCGGCCGGATGATGAGATGAGCAGCACGAGCACCACCA---------CGGCGGACAG-----GAGTGAGACGG------------AAGCGGAAACGGAAACGGAAATGGAACTAGAGACGGG------CAGAGAGTCC----GA-------------------G--GTCGA------TGAGAGTCGCGAGAGCACACCTGTTAACAATGCCAATTC----------------------------------------------------------CT---CGCTGTCTTCGCTGCTGAGCGCCGCAACGCCGACGCCGACGC------------------CAACGC
droEle1 scf7180000491109:12192-12447 + -------------------------GATCTGGATACGGATGCCAGCCGTCTGAT----------------------CCTGCGGCCGGATGATGAGATGAGTAGCACAAGCACTACTA---------CGGCGGACAG-----GAGTGAGACCG------------AAGCGGAAACGGAAACGGAAATGGAAACGGAGACGGA------AAGAGAGGGAGAGAGAGAGGGAGA-------AGGAGAGGCCGA------GGAGAGTCGCGAGAGCACACCTGTTAAT---------CCGACGCTCG----------------------------------------------CCAGTT---CGCTGTCGTCGCTGCTGAGCGCCGCAACGCCCACGCCAACAC------------------CAATAC
droRho1 scf7180000769355:76088-76319 - -------------------------GATCTGGACACGGATGCCAGTCGGCTGAT----------------------CCTACGGCCGGACGACGAGATGAGCAGCACCAGCACCACCA---------CGGCGGACCG-----GAGCGAGACGG------------AACCGGAAACG------------GAGACGGAGACGGAGGCGGACAGA----------GA-------------------G--GCCGA------GGAGAGTCGCGAGAGCACACCTGTTAAC---GCAAACCCGACGCTCG----------------------------------------------CCAGCT---CGCTGTCTTCGCTGCTGAGCGCCGCAACGCCGACGCCGACAC------------------CGACGC
droFic1 scf7180000454066:1546014-1546245 - -----------------------TGGATCTGGACACGGATGCCAGCAGGTTGAT----------------------CCTCCGGCCGGATGACGAGATGAGCAGTACTAGTACGACGA---------CAGCGGAACG-----CAGTGAAACCG------------AAGCGGAAACG------------GAAACGGAAACGGA------GAGG----G---GAGAGGGGGAGG------------AGGAGGG------GGAGAGTCGGGAGAGCACACCTGTTAAC---------CAAACGCTCG----------------------------------------------CCAGTTCGCCAGTTTCAACGCTGCTGAGCGCCAAAACGCCGACGCCCACGC------------------C-----
droKik1 scf7180000302817:504146-504341 + -------------------------GACTTAGATACCGATGCCAGTCGGCTAAT----------------------CCATCGACCGGATGACGAGATGAGCAGCACCAGCACCACGA---------CGGCGGACAG-----GAGCGAGACGG------------AAGCGGAAACAGAGGCGGAGACGGAAACGGAGACCGA------GAGA----------GA-------------------G--GCGGC------GGAGAGCCGCGAGAGCACACCTGTTAAC---A---------CACTC----------------------------------------------------------------------------GCCGCAACGCCCACGCCCACG------------------------G
droAna3 scaffold_13266:4631843-4632071 + -------------AGGGCTCTGGTGGATTTGGATACGGATGCCAGTCGATTGAT----------------------TAATCCGCCGGATGACGAGATGAGCAGCACCAGCACCACCA---------CGGCGGAGAG-----AAGCGAAACGG------------AGGCGGAAACG------------GAAACGGAGACGGA------AAGA----------GA-------------------G--CTGCC------GGAGAGCCGCGAGAGCACACCTGTTAAT---GG-------------------------------------------------------------CAGCT---CTCAGTTAACGTT----AGCGC--CAACGCCACCGCC------ACCGTCGCAGTCGACGTCAGCGT
droBip1 scf7180000395751:437841-438063 + -------------AGGGCCCTGGTGGACCTGGATACGGATGCCAGCCGATTGAT----------------------AAATCCGCCGGATGACGAGATGAGCAGCACCAGCACCACCA---------CGGCGGAGAG-----AAGCGAGACGG------------AGGCGGAAACG------------GAAACGGAGACGGA------AAGA----------GA-------------------G--GTGCC------GGAGAGCCGCGAGAGCACACCTGTTAAT---G-------------------------------------------------------------GCAGCT---CTCAGTTAACGTTAGCGCCAACGGCACCGCCACTGTCGACGC------------------CGACGT
dp5 3:7279984-7280251 - -------------------------GACCTGGACACGGATGCCAGCAAACTGTT----------------------CCGACGGCCCGACGACGAGATGAGCAGCACGACCACCACGGATCCGGCCACGTCA---TC-----GAACGAGACGGAAACGGAGGGCGAACTGGAGACG------------GAAACGGAAACGGA------GAGG----------GA------------------------CGC------GGAGAGTCGCGAGAGCACACCTGTTAAC-----CAATTCGTCGGCAACGCGGGAGC------GG---GAGCGGGAGCGTCGG--------CTAGCAGCT---CGTTGTCTTCTCTTTTGAGTGCGGCAACGCCGACGCCCACAG------------------CAGAGC
droPer2 scaffold_2:7480432-7480705 - -------------------------GACCTGGACACGGATGCCAGCAAACTGTT----------------------CCGACGGCCCGACGACGAGATGAGCAGCACGACCACCACGGATCCGGCCACGTCA---TC-----GAACGAGACGGAAACGGAGGGCGAACTGGAGACG------------GAAACGGAAACGGA------GAGG----------GA------------------------CGC------GGAGAGTCGCGAGAGCACACCTGTTAAC-----CAATTCGTCGGCAACGCGGGAGCGGAAGCGG---GAGCGGGAGCGTCGG--------CTAGCAGCT---CGTTGTCTTCTCTTTTGAGTGCGGCAACGCCGACGCCCACAG------------------CAGAGC
droWil2 scf2_1100000004822:2637729-2638002 - -------------AC---ACTTGTCGATTTGGATACAGATGCTACCAAATTAATGGAGGGTAGCCAAAATCATGCTTCTACCGAT-GCTGATGAAATGAGTAGCACAACAACAACAGAACCGG-----------------------CAACGG------------AAACTGAAACA------------GAAACAGAAGTGGA------AACC----------GA------GGACGGTGGCGGCGATGCCAA------TGAGAGTCGTGAGAGCACACCTGTTAAC---CCGCAG---------------CAGCAGC--AGC-AG--CAGCAACAAACGACTGAGTCCCAAGCAGAT---GGC-----TCTCTCTTGAGAA---------CGACGCCTACGC------------------CCACCA
droVir3 scaffold_12875:16063978-16064140 + -------------------------------------------------------------------------------------------------------------------------------------------------GAAACGG------------AAGTGGACACG------------GAAACGGAGGCAAC------AACT----------GC-------------------C--GCCGACCA---ATCGAGCCGCGAGAGCACACCTGTTAAC---GCTCATCCCCCGA-----------------CGG-AG--CCGACATCGCCGG--------GCAGCAGTT---CGCTATCATCGCTGCTTAGTGCCGCGACGCTGACGCCGACAG------------------CGACGC
droMoj3 scaffold_6496:7714009-7714182 - -------------------------------------------------------------------------------------------------------CACAAGTACAGCAA---------CAACAATTGC----AGGTCGAAACGG------------AAGTGGACACG------------GAAACGGAGGCAAC------AACT----------GC-------------------G--GCCGAGCAGTCGTCGAGTCGCGAGAGCACACCTGTTAAC---GCTCAA----------------------------------------------------------------------TCCCCATTGCCAGAGAAGGCAACGCCAACGGTGACGGCGACAGCGACGTCGACAGCGACGC
droGri2 scaffold_15245:12876554-12876754 + -------------------------A-------------------------------------------------------------------------ACAACAACAACAACAACA---------ACAAAAACAATTGCAGGTTGAAACGG------------AAGTGGACACG------------GAAACGGAGGC------------A----------GT-------------------G--AACCA------ATCGAGTCGGGAGAGCACACCTGTTAATC--GCGCTCCCAGCGCTGA-------CC------AAGAT--CGGAGATCGCCGG--------GCAGCAGCTCATCGCTATCATCGCTGCTGAGTGCCGCGACGCCGACGCCTTCGC------------------CGACGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CAAAAAAAGAAGAAGAACACAAATGGACTTGGGTACGGATGCCAGCCGGTTGAT----------------------TGCTCGGCCGGATGATGGGATGAGCAGCACCAGCACCACCA---------CGGCAGACAG-----GAGCGAGACGG------------AAGCGGAAACG------------GAAACAGAGACGGA------GAGA----------GA-------------------G--GGCGA------GCAGAGTCGTGAGAGCACACCTGTTAAC---GCCAACCCGACGCTCG----------------------------------------------CCAGTT---CGCAGTCTTCGCTGCTGAGCGCCCCAACGCCGACGCCGACGC------------------CGACGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................GCCAGCCGGTTGAT----------------------TGCTC.......................................................................................................................................................................................................................................................................................................................................................1920.50101000000000
...............................................................................................................................GGCAGACAG-----GAGCGAGACGG------------AAGCG...............................................................................................................................................................................................................................................................2520.50100010000000
...................................................................................................................................................................................................GACGGA------GAGA----------GA-------------------G--GGCGA------GC......................................................................................................................................................................2020.50101000000000
.....................................................................................................................................CAG-----GAGCGAGACGG------------AAGC................................................................................................................................................................................................................................................................1820.50110000000000
..................................................................................................................................................................................................................................................G--GGCGA------GCAGAGTCGTGAGAGC........................................................................................................................................................2220.50101000000000
........................................................................................................................................................................................................................................................................................TAAC---GCCAACCCGACGCTCG----------------------------------------------CCA........................................................................2320.50101000000000
.....................................................................................................................................................................................................................................................GGCGA------GCAGAGTCGTGAG...........................................................................................................................................................1820.50101000000000
.....................................................................................................................................................CGG------------AAGCGGAAACG------------GAAACA.......................................................................................................................................................................................................................................2020.50101000000000
.............................................................................................................................................................................................AACAGAGACGGA------GAGA----------GA-------------------G--GG.................................................................................................................................................................................2120.50100000010000
.....................................................................................................................................................................................................................................................................GTCGTGAGAGCACACCTGTT...............................................................................................................................................2020.50101000000000
..........................................................................................................................................................................AAACG------------GAAACAGAGACGGA------GA.......................................................................................................................................................................................................................2120.50100000010000
.................................................................................................................................................................................................................GA----------GA-------------------G--GGCGA------GCAGAGTCGT..............................................................................................................................................................2020.50100000010000
.................................................................................................................................................................................................................................................................................CACCTGTTAAC---GCCAACCCGACGCTC..........................................................................................................................2620.50101000000000
.....................................GATGCCAGCCGGTTGAT----------------------TGCT........................................................................................................................................................................................................................................................................................................................................................2120.50100000010000
..............................................................................................................................................................................................ACAGAGACGGA------GAGA----------GA-------------------G--GGC................................................................................................................................................................................2120.50100000010000
.....................................................................................................................................................................................................................................................GGCGA------GCAGAGTCGTGAGAGC........................................................................................................................................................2120.50100000010000
......................................ATGCCAGCCGGTTGAT----------------------TGCT........................................................................................................................................................................................................................................................................................................................................................2020.50100000010000
..........................................................................................................................................................................................................................................................................GAGAGCACACCTGTTAAC---GC.......................................................................................................................................2020.50100100000000
........................................................................................................................................................................................................................................................................................................................................................................................GCGCCCCAACGCCGACGCCGACGC------------------......2420.50100010000000
................................................GTTGAT----------------------TGCTCGGCCGGAT...............................................................................................................................................................................................................................................................................................................................................1920.50101000000000
.............................................................................................................CACCACCA---------CGGCAGACAG-----GAGCGAGAC..................................................................................................................................................................................................................................................................................2720.50100000100000
..................................................................................................................................................................................................AGACGGA------GAGA----------GA-------------------G--GGCGA------GC......................................................................................................................................................................2120.50100000010000
.....................................................................................................................................................CGG------------AAGCGGAAACG------------GAAAC........................................................................................................................................................................................................................................1970.14100000010000
droEre2
-----------------------TGGATTTGGATACGGATGCCAGCCGCTTGAT----------------------TGCTCGACCGGATGATGAGATGAGCAGCACTAGTACCACCA---------CGGCAGACAG-----GAGTGAGACGG------------AAGCGGAAACG------------GAAACGGAGACGGA------CAGA----------GA-------------------G--GGCGA------GCAGAGTCGCGAGAGCACACCTGTTAAC---GCCAACCCGACGCTCG----------------------------------------------CCAGTT---CGCAGTCTTCGCTGCTGAGCGCTGCAACGTTGACGCCGACGCCTACGACGACGCCGACGACGACGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................GCAGAGTCGCGAGAGCACACCT..................................................................................................................................................2212.0020000020
...............................................................................................................................GGCAGACAG-----GAGTGAGACGG------------A...................................................................................................................................................................................................................................................................2111.0010000100
.......................................................................................................................................................................................................GA------CAGA----------GA-------------------G--GGCGA------GCAGAGTCGCGAGA..........................................................................................................................................................2811.0010000100
...........................................................................................................................................................................................GAAACGGAGACGGA------CAGA----------GA-------------------G--GGCGA------........................................................................................................................................................................2611.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................GCTGCAACGTTGACGCCGA...........................1911.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGCGCTGCAACGTTGACGC..............................2411.0010000100
................................................................................CGACCGGATGATGAGATGAGCAGC................................................................................................................................................................................................................................................................................................................................2411.0011000000
................................................................................CGACCGGATGATGAGATGAG....................................................................................................................................................................................................................................................................................................................................2011.0010000010
..............................................................................................................................CGGCAGACAG-----GAGTGAGA...................................................................................................................................................................................................................................................................................1811.0010001000
..........................................................................................................................................................................................................................................................................................................................................................................GTCTTCGCTGCTGAGCGCTGCAACG.....................................2511.0011000000
.................................................................................GACCGGATGATGAGATGAGCA..................................................................................................................................................................................................................................................................................................................................2111.0011000000
...................................................................................................................................................................................................GACGGA------CAGA----------GA-------------------G--GGCGA------........................................................................................................................................................................1811.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................GCCGACGCCTACGACGACGCCGAC........2411.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CGCCTACGACGACGCCGA.........1811.0010000010
.....................................................T----------------------TGCTCGACCGGATGATGAGATGAGC...................................................................................................................................................................................................................................................................................................................................2611.0010100000
.............................................................................................................................................GAGTGAGACGG------------AAGCGGAAACG------------GAAAC........................................................................................................................................................................................................................................2711.0010000100
..................................................................................................................................................AGACGG------------AAGCGGAAACG------------GA...........................................................................................................................................................................................................................................1911.0010001000
..............................................................................................................................................................................................................................................................................GCACACCTGTTAAC---GCCAACCCGACGCT...........................................................................................................................2811.0011000000
..............................................................................................................................................................................................................................................................................GCACACCTGTTAAC---GCCAACC..................................................................................................................................2111.0010100000
..............................................................................................................ACCACCA---------CGGCAGACAG-----GAGTGAGAC..................................................................................................................................................................................................................................................................................2611.0010100000
.............................................................................................AGATGAGCAGCACTAGTA.........................................................................................................................................................................................................................................................................................................................1811.0010000010
.................................................TTGAT----------------------TGCTCGACCGGAT...............................................................................................................................................................................................................................................................................................................................................1811.0010001000
...............................................................................................................................GGCAGACAG-----GAGTGAGACGG------------AAGC................................................................................................................................................................................................................................................................2411.0010000100
......................................................................................................................................................GG------------AAGCGGAAACG------------GAAACGG......................................................................................................................................................................................................................................2090.1111000000
.......................................................................................................................................................G------------AAGCGGAAACG------------GAAACGG......................................................................................................................................................................................................................................19100.1011000000
droSec2
-----------------------TGGACTTGGATACGGATGCCAGTCGGTTGAT----------------------TGCTCGGCCGGACGATGAGATGAGCAGCACAAGTACCACCA---------CTGCAGACAG-----GAGCGAGACGG------------AAGCGGAAACG------------GAAACGGAGACGGA------GAGA----------GA-------------------G--GGCGA------GCAGAGTCGCGAGAGCACACCTGTTAAC---GCCAACCCGACGCTCA----------------------------------------------CCAGTT---CGCAGTCTTCGCTGCTGAGCGCCGCAACGCCGACGTCGACGC------------------C-----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................GTCGCGAGAGCACACCTGTTA..............................................................................................................................................2111.0011000
....................................................................................................................A---------CTGCAGACAG-----GAGCGAGAC..................................................................................................................................................................................................................................................................................2011.0010010
............................................................................................................GTACCACCA---------CTGCAGACAG-----GAGCGA.....................................................................................................................................................................................................................................................................................2511.0010100
............................TTGGATACGGATGCCAGTCGGTT.....................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
..........................................................................................................AAGTACCACCA---------CTGCAGACAG-----GAGC.......................................................................................................................................................................................................................................................................................2511.0010100
............................................................................................................................................................................................AAACGGAGACGGA------GAGA----------GA-------------------G--GG.................................................................................................................................................................................2211.0010100
...................................................................................................................CA---------CTGCAGACAG-----GAGCGAGACGG------------AAGC................................................................................................................................................................................................................................................................2711.0010100
.....................................GATGCCAGTCGGTTGAT----------------------TGCT........................................................................................................................................................................................................................................................................................................................................................2111.0010010
.............................................................................................................................................................................................................................................................................................................CA----------------------------------------------CCAGTT---CGCAGTCTTCGCT.....................................................2111.0010010
....................................................................................................................................................................................................................................................................AGTCGCGAGAGCACACCTG.................................................................................................................................................1911.0011000
............................................................................TGCTCGGCCGGACGATGAGATGAGC...................................................................................................................................................................................................................................................................................................................................2511.0010001
..................................ACGGATGCCAGTCGGTTGAT----------------------TGCT........................................................................................................................................................................................................................................................................................................................................................2411.0010100
..............................................................................................GATGAGCAGCACAAGTACCACCA---------CT........................................................................................................................................................................................................................................................................................................2511.0010100
............................................................................................................GTACCACCA---------CTGCAGACAG-----GAGCGAGA...................................................................................................................................................................................................................................................................................2711.0010010
............................................................................................................GTACCACCA---------CTGCAGACAG-----GAGCGAG....................................................................................................................................................................................................................................................................................2611.0010010
.............................................................................................................................................................................................AACGGAGACGGA------GAGA----------GA-------------------G--GG.................................................................................................................................................................................2111.0010010
................................................................................................................................................................................................................................................................GCAGAGTCGCGAGAGCACACCT..................................................................................................................................................2211.0010010
droSim2
-----------------------TGGACTTGGATACGGATGCCAGTCGGTTGAT----------------------TGCTCGGCCGGACGATGAGATGAGCAGCACTAGTACCACCA---------CTGCAGACAG-----GAGCGAGACGG------------AAGCGGAAACG------------GAAACGGAGACGGA------GAGA----------GA-------------------G--GGCGA------GCAGAGTCGCGAGAGCACACCTGTTAAC---GCCAACCCGACGCTCG----------------------------------------------CCAGTT---CGCAGTCTTCGCTGCTGAGCGCCGCAACGCCGACGCCGACGC------------------C-----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................GGTTGAT----------------------TGCTCGGCCGGACGATGAGA........................................................................................................................................................................................................................................................................................................................................2712.00200200000000000000
...................................................GAT----------------------TGCTCGGCCGGACGATGAGATGAG....................................................................................................................................................................................................................................................................................................................................2711.00100000000000100000
...................................................................................CCGGACGATGAGATGAGC...................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
............................................GTCGGTTGAT----------------------TGCTCGGC....................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
....................................................AT----------------------TGCTCGGCCGGACGATGAGATGAGC...................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
...................................CGGATGCCAGTCGGTTGAT----------------------TGCTCGGCC...................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
...................................................................................................................................................................................................GACGGA------GAGA----------GA-------------------G--GGCGA------G.......................................................................................................................................................................1911.00100000000000100000
..........................................................................................................................................................................................................................................................................GAGAGCACACCTGTTAAC---GCCAACC..................................................................................................................................2511.00100010000000000000
...........................CTTGGATACGGATGCCAGTCGGTTG....................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
................................................................................CGGCCGGACGATGAGATGAGC...................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...............................GATACGGATGCCAGTCGGTTGAT----------------------TGCT........................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.......................................TGCCAGTCGGTTGAT----------------------TGCT........................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CGCTGCTGAGCGCCGCAACGCCGAC................................2511.00100010000000000000
...................................................GAT----------------------TGCTCGGCCGGACGATGAGATGAGC...................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.............................TGGATACGGATGCCAGTCGGTT.....................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...................................................................................................................................................................................................GACGGA------GAGA----------GA-------------------G--GGCGA------........................................................................................................................................................................1811.00100100000000000000
................................................................................................................................................................................................................................................................GCAGAGTCGCGAGAGCACACCT..................................................................................................................................................2211.00100000000000100000
.........................................................................................................................................................................GAAACG------------GAAACGGAGACG.................................................................................................................................................................................................................................1820.50100001000000000000
dm3
-------------AGAGCCCTCGTAGACTTGGATACGGATGCCAGTCGGTTGAT----------------------TGCTCGGCCGGATGATGAGATGAGCAGCACTAGTACCACTA---------CTGCAGACAG-----GAGCGAGACGG------------AAGCGGAAACG------------GAAACGGAGACGGA------GAGA----------GA-------------------G--GGCGA------GCAGAGTCGCGAGAGCACACCTGTTAAC---GCCAACCCGACGCTCG----------------------------------------------CCAGTT---CGCAGTCTTCGCTGCTGAGCGCCGCAACGCCGACGCCGACGC------------------CGACGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................GA-------------------G--GGCGA------GCAGAGTCGCG.............................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GCAGAGTCGCGAGAGCACACCT..................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
............................................................................................................................................................................ACG------------GAAACGGAGACGGA------GAG......................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000000000
................................................................................................................................................................................................................................................................GCAGAGTCGCGAGAGCACACC...................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000
...............................................................................................................CCACTA---------CTGCAGACAG-----GAGCGAGAC..................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AGCGGAAACG------------GAAACGGAGACGGA------.........................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CGGAAACG------------GAAACGGAGACGGA------GAGA----------...........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................T----------------------TGCTCGGCCGGATGATGAGATGA.....................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CGCGAGAGCACACCTGTTAAC---GCC......................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................GCACTAGTACCACTA---------CTGC......................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CTGTTAAC---GCCAACCCGACG.............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AGACAG-----GAGCGAGACGG------------AA..................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GA----------GA-------------------G--GGCGA------GCAGAGTCGCGAGA..........................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.....................................GATGCCAGTCGGTTGAT----------------------TGCTC.......................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................GACAG-----GAGCGAGACGG------------AAGCG...............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................A----------GA-------------------G--GGCGA------GCAGAGTCGCGAG...........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................GAT----------------------TGCTCGGCCGGATGATGAGATGA.....................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GA-------------------G--GGCGA------GCAGAGTCGCGAGAGC........................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................ACGGAGACGGA------GAGA----------GA-------------------G--GGCGA------GCA.....................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GACGGA------GAGA----------GA-------------------G--GGCGA------GC......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................................................................................................................AACGGAGACGGA------GAGA----------GA-------------------G--G..................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................CGG------------AAGCGGAAACG------------GAAACGGAGACGGA------G........................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CAGTCTTCGCTGCTGAGCGCCGC.........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GA----------GA-------------------G--GGCGA------GCAGAGTCGC..............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTCGCTGCTGAGCGCCGCAACGCCGA.................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TGCAGACAG-----GAGCGAGACGG------------AA..................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.............................................................................................................................................................................CG------------GAAACGGAGACGGA------GAGA----------GA-------------------G--GG.................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................GCGA------GCAGAGTCGCGAGAGC........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................GATACGGATGCCAGTCGGTTGAT----------------------............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATACGGATGCCAGTCGGTTGAT----------------------TGCT........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................GACAG-----GAGCGAGACGG------------AAGC................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................CAGAGTCGCGAGAGCACACCT..................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................TGCAGACAG-----GAGCGAGACGG------------A...................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................AC---GCCAACCCGACGCTCG----------------------------------------------CCAGT......................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................C---GCCAACCCGACGCTCG----------------------------------------------CCAGT......................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CGA------GCAGAGTCGCGAGAGCACA.....................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................GGATGATGAGATGAGCAGCACT.............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................GATGATGAGATGAGCAGCACT.............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CGGAAACG------------GAAACGGAGAC..................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GCTCGGCCGGATGATGAGATG......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TACGGATGCCAGTCGGTTGAT----------------------TGCTC.......................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................GCAGACAG-----GAGCGAGACGG------------AAGC................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................A---------CTGCAGACAG-----GAGCGAGACGG------------A...................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GCTCGGCCGGATGATGAGATGAGC...................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................................................................................................................................................................................................................................................................................................................................................................CTTCGCTGCTGAGCGCCGCAACGCCGAC................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................................TCGGCCGGATGATGAGATGAGC...................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................CAGACAG-----GAGCGAGACGG------------AAG.................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................GGAAACG------------GAAACGGAGACGGA------GAGA----------GA-------------------......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AAC---GCCAACCCGACGCTCG----------------------------------------------C..........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GAGCGAGACGG------------AAGCGGAAACG------------GA...........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTCGCTGCTGAGCGCCGCAACGC....................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................CTTGGATACGGATGCCAGTCGGTT.....................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GTTAAC---GCCAACCCGACGCTCG----------------------------------------------C..........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AGCGGAAACG------------GAAACGGA.....................................................................................................................................................................................................................................1840.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CGCCGACGCCGACGC------------------CGA...1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................CAACGCCGACGCCGACGC------------------......1820.5010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GACGG------------AAGCGGAAACG------------GA...........................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................G------------AAGCGGAAACG------------GAAACGGA.....................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
droEug1
-----------------------TGGATTTGGATACAGACGCGACTCGGTTGAT----------------------TCTACGGCCGGATGATGAAATGAGCAGCACAAGCACTACGA---------CACTAGACAG-----GAGTGAGACGG------------AACCGGAAACG------------GAAACGGAGACGGA------AAGA----------GA-------------------G--GCCGA------GGAGAGCCGTGAGAGCACACCTGTTAAT---GTTAACCCAACGCATA----------------------------------------------CTAGTT---CGCTTTCTTCGCTGCTGAGCGCGGCAACGCCGACGCCGACGC------------------CCACGCSizeHit CountTotal NormTotal
No Reads
droBia1
-------------AGGGCTCTGGTGGATCTGGATACGGATGCCAGTCGCTTGAT----------------------TCTACGGCCGGATGATGAGATGAGCAGCACCAGCACCACGA---------CGGCGGAGCG-----GAGCGAGACGG------------AAGCGGAAACG------------GAAACGGAGACGGA------GAGA----------GAGGGTGAGGACGGG---AGGGAGGCCGA------GGAGAGTCGCGAGAGCACACCTGTTAAC---------CCGACAATTG----------------------------------------------CCAGTT---CGCTTTCCTCGCTGCTGAGCGCCGCTACGCCGACGCCGACGCCA------ACGCCGACCGCGACGCSizeHit CountTotal NormTotal
No Reads
droTak1
-----------------------TGGATTTGGATACGGATGCCAGCCGTCTGAT----------------------CCTCCGGCCGGATGATGAGATGAGCAGCACGAGCACCACCA---------CGGCGGACAG-----GAGTGAGACGG------------AAGCGGAAACGGAAACGGAAATGGAACTAGAGACGGG------CAGAGAGTCC----GA-------------------G--GTCGA------TGAGAGTCGCGAGAGCACACCTGTTAACAATGCCAATTC----------------------------------------------------------CT---CGCTGTCTTCGCTGCTGAGCGCCGCAACGCCGACGCCGACGC------------------CAACGCSizeHit CountTotal NormTotal
No Reads
droEle1
-------------------------GATCTGGATACGGATGCCAGCCGTCTGAT----------------------CCTGCGGCCGGATGATGAGATGAGTAGCACAAGCACTACTA---------CGGCGGACAG-----GAGTGAGACCG------------AAGCGGAAACGGAAACGGAAATGGAAACGGAGACGGA------AAGAGAGGGAGAGAGAGAGGGAGA-------AGGAGAGGCCGA------GGAGAGTCGCGAGAGCACACCTGTTAAT---------CCGACGCTCG----------------------------------------------CCAGTT---CGCTGTCGTCGCTGCTGAGCGCCGCAACGCCCACGCCAACAC------------------CAATACSizeHit CountTotal NormTotal
No Reads
droRho1
-------------------------GATCTGGACACGGATGCCAGTCGGCTGAT----------------------CCTACGGCCGGACGACGAGATGAGCAGCACCAGCACCACCA---------CGGCGGACCG-----GAGCGAGACGG------------AACCGGAAACG------------GAGACGGAGACGGAGGCGGACAGA----------GA-------------------G--GCCGA------GGAGAGTCGCGAGAGCACACCTGTTAAC---GCAAACCCGACGCTCG----------------------------------------------CCAGCT---CGCTGTCTTCGCTGCTGAGCGCCGCAACGCCGACGCCGACAC------------------CGACGCSizeHit CountTotal NormTotal
No Reads
droFic1
-----------------------TGGATCTGGACACGGATGCCAGCAGGTTGAT----------------------CCTCCGGCCGGATGACGAGATGAGCAGTACTAGTACGACGA---------CAGCGGAACG-----CAGTGAAACCG------------AAGCGGAAACG------------GAAACGGAAACGGA------GAGG----G---GAGAGGGGGAGG------------AGGAGGG------GGAGAGTCGGGAGAGCACACCTGTTAAC---------CAAACGCTCG----------------------------------------------CCAGTTCGCCAGTTTCAACGCTGCTGAGCGCCAAAACGCCGACGCCCACGC------------------C-----SizeHit CountTotal NormTotal
No Reads
droKik1
-------------------------GACTTAGATACCGATGCCAGTCGGCTAAT----------------------CCATCGACCGGATGACGAGATGAGCAGCACCAGCACCACGA---------CGGCGGACAG-----GAGCGAGACGG------------AAGCGGAAACAGAGGCGGAGACGGAAACGGAGACCGA------GAGA----------GA-------------------G--GCGGC------GGAGAGCCGCGAGAGCACACCTGTTAAC---A---------CACTC----------------------------------------------------------------------------GCCGCAACGCCCACGCCCACG------------------------GSizeHit CountTotal NormTotal
No Reads
droAna3
-------------AGGGCTCTGGTGGATTTGGATACGGATGCCAGTCGATTGAT----------------------TAATCCGCCGGATGACGAGATGAGCAGCACCAGCACCACCA---------CGGCGGAGAG-----AAGCGAAACGG------------AGGCGGAAACG------------GAAACGGAGACGGA------AAGA----------GA-------------------G--CTGCC------GGAGAGCCGCGAGAGCACACCTGTTAAT---GG-------------------------------------------------------------CAGCT---CTCAGTTAACGTT----AGCGC--CAACGCCACCGCC------ACCGTCGCAGTCGACGTCAGCGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................GCACCACCA---------CGGCGGAGAG-----AAG........................................................................................................................................................................................................................................................................................2211.001100000
.....................................................................................................................................GAG-----AAGCGAAACGG------------AGGC................................................................................................................................................................................................................................................................1811.001010000
............................................................................................................................................................................................................................................................................GAGCACACCTGTTAAT---GG-------------------------------------------------------------CAGCC---..................................................................2311.001010000
.............................................................................................AGATGAGCAGCACCAGCACCACCA---------CGGC......................................................................................................................................................................................................................................................................................................2811.001000001
.........................GATTTGGATACGGATGCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
......................................................................................................................................................................GCGGAAACG------------GAAACGGAGACG.................................................................................................................................................................................................................................2111.001000001
................................................................................................................................................................................................................................................................................ACACCTGTTAAT---GG-------------------------------------------------------------CAGCT---..................................................................1911.001010000
...............GGCTCTGGTGGATTTGGATACG...................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.................................................................................................................................................GAAACGG------------AGGCGGAAACG------------GAAACG.......................................................................................................................................................................................................................................2411.001100000
...................................................................................................................................................................................................GACGGA------AAGA----------GA-------------------G--CTGCC------GGAGAGC.................................................................................................................................................................2511.001000001
................................................ATTGAT----------------------TAATCCGCCGGATGACGAGA........................................................................................................................................................................................................................................................................................................................................2611.001000001
......................................................................................................................................................................................................................................................................................................................................................................CTCAGTTAACGTT----AGCGC--C.........................................1911.001010000
..................................................................................................AGCAGCACCAGCACCACCA---------..........................................................................................................................................................................................................................................................................................................1950.201010000
.........................................................................................................................................................................GAAACG------------GAAACGGAGACGG................................................................................................................................................................................................................................1960.171100000
droBip1
-------------AGGGCCCTGGTGGACCTGGATACGGATGCCAGCCGATTGAT----------------------AAATCCGCCGGATGACGAGATGAGCAGCACCAGCACCACCA---------CGGCGGAGAG-----AAGCGAGACGG------------AGGCGGAAACG------------GAAACGGAGACGGA------AAGA----------GA-------------------G--GTGCC------GGAGAGCCGCGAGAGCACACCTGTTAAT---G-------------------------------------------------------------GCAGCT---CTCAGTTAACGTTAGCGCCAACGGCACCGCCACTGTCGACGC------------------CGACGTSizeHit CountTotal NormTotal
No Reads
dp5
-------------------------GACCTGGACACGGATGCCAGCAAACTGTT----------------------CCGACGGCCCGACGACGAGATGAGCAGCACGACCACCACGGATCCGGCCACGTCA---TC-----GAACGAGACGGAAACGGAGGGCGAACTGGAGACG------------GAAACGGAAACGGA------GAGG----------GA------------------------CGC------GGAGAGTCGCGAGAGCACACCTGTTAAC-----CAATTCGTCGGCAACGCGGGAGC------GG---GAGCGGGAGCGTCGG--------CTAGCAGCT---CGTTGTCTTCTCTTTTGAGTGCGGCAACGCCGACGCCCACAG------------------CAGAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................GAACTGGAGACG------------GAAACGGAAA...................................................................................................................................................................................................................................2211.0010100000000
...............................................................................................................CCACGGATCCGGCCACGT.......................................................................................................................................................................................................................................................................................................1811.0010100000000
.................................CACGGATGCCAGCAAACTGTT----------------------CC..........................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..............................................AAACTGTT----------------------CCGACGGCCCGACGACGA..........................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.................................................................................................................................CA---TC-----GAACGAGACGGAAACGGAGGG......................................................................................................................................................................................................................................................................2511.0010100000000
..............................................................................GACGGCCCGACGACGAGATGAGCA..................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.........................GACCTGGACACGGATGCCAGCAAA.......................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..........................................................................................................GACCACCACGGATCCGGCC...........................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................................CAGCAAACTGTT----------------------CCGACGGCCCGACGA.............................................................................................................................................................................................................................................................................................................................................2711.0010100000000
............................................................................................................CCACCACGGATCCGGCCACGT.......................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................ACGACGAGATGAGCAGCACGACCA.........................................................................................................................................................................................................................................................................................................................2411.0010100000000
..................................................................................................................................................AGACGGAAACGGAGGGCGAAC.................................................................................................................................................................................................................................................................2111.0010010000000
.................................................................................................................................................................................................................................................................................CACCTGTTAAC-----CAATTCGTCGGCAAC........................................................................................................................2611.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................CTAGCAGCT---CGTTGTCTTCT.......................................................2011.0010100000000
.................................................................................GGCCCGACGACGAGATGAGCA..................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............................................................................................................................................................................................AACGGAAACGGA------GAGG----------GA------------------------CGC------GGA.....................................................................................................................................................................2411.0010100000000
.............................................................................................................................................................................................................................................................................................................................................GTCGG--------CTAGCAGCT---CGTTGTCTTCT.......................................................2511.0010100000000
.............................................................................................................................................................................................AACGGAAACGGA------GAGG----------GA------------------------CGC------........................................................................................................................................................................2111.0010100000000
.............................................................................................................................................................GAGGGCGAACTGGAGACG------------.............................................................................................................................................................................................................................................1811.0010000001000
..........................................................................................................GACCACCACGGATCCGGCCACGT.......................................................................................................................................................................................................................................................................................................2311.0010100000000
.................................................................................................................................................................................................................................................................................................................................................G--------CTAGCAGCT---CGTTGTCTTCT.......................................................2111.0010100000000
........................................................................................................ACGACCACCACGGATCCGGCCACGT.......................................................................................................................................................................................................................................................................................................2511.0010010000000
.............................................................................................................CACCACGGATCCGGCCACGT.......................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................................................................GCAGCACGACCACCACGG...................................................................................................................................................................................................................................................................................................................1811.0010100000000
..............................................................................................................................................................................G------------GAAACGGAAACGGA------GAGG----------GA------------------------.................................................................................................................................................................................2111.0010100000000
droPer2
-------------------------GACCTGGACACGGATGCCAGCAAACTGTT----------------------CCGACGGCCCGACGACGAGATGAGCAGCACGACCACCACGGATCCGGCCACGTCA---TC-----GAACGAGACGGAAACGGAGGGCGAACTGGAGACG------------GAAACGGAAACGGA------GAGG----------GA------------------------CGC------GGAGAGTCGCGAGAGCACACCTGTTAAC-----CAATTCGTCGGCAACGCGGGAGCGGAAGCGG---GAGCGGGAGCGTCGG--------CTAGCAGCT---CGTTGTCTTCTCTTTTGAGTGCGGCAACGCCGACGCCCACAG------------------CAGAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................GCACACCTGTTAAC-----CAATTCGTCGGC...........................................................................................................................2613.003300000
.................................CACGGATGCCAGCAAACT.....................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
.................................................................................................................................................................................................................................................................................................................................................G--------CTAGCAGCT---CGTTGTCT..........................................................1811.001100000
.........................................................................................................................................................................................................................................................................................AAC-----CAATTCGTCGGCAACGCGGGAGCGG..............................................................................................................2811.001100000
..........................................................................................................................................................................................................................................................................................................................................................CTAGCAGCT---CGTTGTCTTCT.......................................................2011.001001000
..................................................................................................................................................................................................................................................................AGAGTCGCGAGAGCACACCTG.................................................................................................................................................2111.001010000
.................................................................................................................................................................................................................................................................................................................................................................................CTTTTGAGTGCGGCAACGCC...................................2011.001010000
..............................................................................................................ACCACGGATCCGGCCACGT.......................................................................................................................................................................................................................................................................................................1911.001010000
droWil2
-------------AC---ACTTGTCGATTTGGATACAGATGCTACCAAATTAATGGAGGGTAGCCAAAATCATGCTTCTACCGAT-GCTGATGAAATGAGTAGCACAACAACAACAGAACCGG-----------------------CAACGG------------AAACTGAAACA------------GAAACAGAAGTGGA------AACC----------GA------GGACGGTGGCGGCGATGCCAA------TGAGAGTCGTGAGAGCACACCTGTTAAC---CCGCAG---------------CAGCAGC--AGC-AG--CAGCAACAAACGACTGAGTCCCAAGCAGAT---GGC-----TCTCTCTTGAGAA---------CGACGCCTACGC------------------CCACCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................TTGGATACAGATGCTACC..........................................................................................................................................................................................................................................................................................................................................................................................1812.00220000
.........................GATTTGGATACAGATGCTA............................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
................................................................................................................................................................................................................................................................................................................................................GACTGAGTCCCAAGCAGAT---G.................................................................2011.00100010
...................CTTGTCGATTTGGATACAGATGCTACC..........................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
.................................................................................................................................................................................................................................................................GAGAGTCGTGAGAGCACACCT..................................................................................................................................................2111.00100100
........................................................................................................................................................................................................................................................AA------TGAGAGTCGTGAGAGC........................................................................................................................................................1811.00100010
....................................AGATGCTACCAAATTAATGGAGGGT...........................................................................................................................................................................................................................................................................................................................................................................2511.00100010
..................................................................................................................................................................................................................................................................................................................................................CTGAGTCCCAAGCAGAT---GGC-----TCT.......................................................2311.00100100
......................................................................................................................................................................................................................................................................................................................................................GTCCCAAGCAGAT---GGC-----TCT.......................................................1911.00100010
.............................................................................................................................................................................................AACAGAAGTGGA------AACC----------GA------G..................................................................................................................................................................................................1911.00100010
............................................................................................................................................................................................................................................................................................................................................AAACGACTGAGTCCCAAGCA........................................................................2011.00100100
...........................................ACCAAATTAATGGAGGGTA..........................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.............................................................................CTACCGAT-GCTGATGAAATGAGT...................................................................................................................................................................................................................................................................................................................................2311.00100100
..................................................................................................................................................................................................................................................GATGCCAA------TGAGAGTCGTGAGA..........................................................................................................................................................2211.00100010
..................................................................................................................................................................................................................................................................................................................................................CTGAGTCCCAAGCAGAT---GGC-----T.........................................................2111.00100010
......................GTCGATTTGGATACAGATGCTAC...........................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.............................................................................................................................................................................................................................................................................................................................................AACGACTGAGTCCCAAGCAGAT---GGC-----TC........................................................2711.00100010
..............................................................................................................................................................................................................................................................................................................................................ACGACTGAGTCCCAAGCAGAT---GGC-----..........................................................2411.00100010
...................................CAGATGCTACCAAATTAATGGAGGGT...........................................................................................................................................................................................................................................................................................................................................................................2611.00100100
...................................CAGATGCTACCAAATTAATGGA...............................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.................................................................................................................................................................................................GAAGTGGA------AACC----------GA------GGACGGTGGC.........................................................................................................................................................................................2411.00100100
......................................................................................................................................................................................................GGA------AACC----------GA------GGACGGTGGCGGC......................................................................................................................................................................................2211.00101000
....................................................................................................................................................ACGG------------AAACTGAAACA------------GAAACA.......................................................................................................................................................................................................................................2111.00110000
...............................................................................................................................................................................................CAGAAGTGGA------AACC----------GA------GGACGGT............................................................................................................................................................................................2311.00100010
.................................TACAGATGCTACCAAATTAATGGAG..............................................................................................................................................................................................................................................................................................................................................................................2511.00100010
............................................................................................................................................................................................AAACAGAAGTGGA------AACC----------GA------GGACGGT............................................................................................................................................................................................2611.00100100
..................................................................................................................................................CAACGG------------AAACTGAAACA------------GAAACAGA.....................................................................................................................................................................................................................................2511.00100010
....................................................................................................................................................................................................GTGGA------AACC----------GA------GGACGGTGG..........................................................................................................................................................................................2011.00100010
droVir3
-------------------------------------------------------------------------------------------------------------------------------------------------GAAACGG------------AAGTGGACACG------------GAAACGGAGGCAAC------AACT----------GC-------------------C--GCCGACCA---ATCGAGCCGCGAGAGCACACCTGTTAAC---GCTCATCCCCCGA-----------------CGG-AG--CCGACATCGCCGG--------GCAGCAGTT---CGCTATCATCGCTGCTTAGTGCCGCGACGCTGACGCCGACAG------------------CGACGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................GGACACG------------GAAACGGAGGC..................................................................................................................................................................................................................................1813.003001100000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................ATCCCCCGA-----------------CGG-AG--CCGA...............................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................ATCGCCGG--------GCAGCAGTT---CGC...............................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................ACCA---ATCGAGCCGCGAGA..........................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GG--------GCAGCAGTT---CGCTATCATCGC......................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................GCCGACCA---ATCGAGCCGCGAGA..........................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................GCTATCATCGCTGCTTAGTGC............................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TGCTTAGTGCCGCGACGCTGA.................................2111.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................GCAAC------AACT----------GC-------------------C--GCCGACCA---ATCGAGC.................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CGAGCCGCGAGAGCACACC...................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AGTT---CGCTATCATCGCTGC...................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CGCCGG--------GCAGCAGTT---CGCTATC...........................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................G------------AAGTGGACACG------------GAAACGGA.....................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................AC------AACT----------GC-------------------C--GCCGACCA---ATC.....................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................ATCGAGCCGCGAGAGCACACCTGTTA..............................................................................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
................................................................................................................................................................................................................ACT----------GC-------------------C--GCCGACCA---ATCGAGCCGCGAGA..........................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................A---ATCGAGCCGCGAGAGCACACCT..................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GAAACGG------------AAGTGGACACG------------GA...........................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CA---ATCGAGCCGCGAGAGC........................................................................................................................................................1820.501000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CATCGCCGG--------GCAGCAA.......................................................................1680.131000000000000000000000000000000000000000000000000000000010000000
droMoj3
-------------------------------------------------------------------------------------------------------CACAAGTACAGCAA---------CAACAATTGC----AGGTCGAAACGG------------AAGTGGACACG------------GAAACGGAGGCAAC------AACT----------GC-------------------G--GCCGAGCAGTCGTCGAGTCGCGAGAGCACACCTGTTAAC---GCTCAA----------------------------------------------------------------------TCCCCATTGCCAGAGAAGGCAACGCCAACGGTGACGGCGACAGCGACGTCGACAGCGACGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................CAAC------AACT----------GC-------------------G--GCCGAGCAGT.........................................................................................................................................................................2111.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................GGTGACGGCGACAGCGACGT............2011.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................CGCCAACGGTGACGGCGACA...................2011.001100000
.............................................................................................................................................GGTCGAAACGG------------AAGTGGACA...........................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................................................................................................................AAC---GCTCAA----------------------------------------------------------------------TCCCCATTGCCAGA...............................................2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................GACGGCGACAGCGACGTCGA.........2040.251100000
droGri2
-------------------------A-------------------------------------------------------------------------ACAACAACAACAACAACA---------ACAAAAACAATTGCAGGTTGAAACGG------------AAGTGGACACG------------GAAACGGAGGC------------A----------GT-------------------G--AACCA------ATCGAGTCGGGAGAGCACACCTGTTAATC--GCGCTCCCAGCGCTGA-------CC------AAGAT--CGGAGATCGCCGG--------GCAGCAGCTCATCGCTATCATCGCTGCTGAGTGCCGCGACGCCGACGCCTTCGC------------------CGACGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................CTCCCAGCGCTGA-------CC------AAGAT--...................................................................................................2011.00110
..................................................................................................................................................................................................................................................................................................CTCCCAGCGCTGA-------CC------AAGAT--CGGA...............................................................................................2411.00101

Generated: 05/17/2015 at 10:25 PM