ID:

dya_369

 Coordinate:

2L:18557764-18557914 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.5 -7.2 -7.0

Flybase annnotation

exon [dyak_GLEANR_558:6]; CDS [Dyak\GE21852-cds]; intron [Dyak\GE21852-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCGTCGTACTGGGTTACGCCACATTCCCATTCGTTCTGCTTGAATTTATGGTAAGTCTGATTTGGAAATTCGAATATACATATATACCGATGAGTTAACAAGGAAACATGCAAACATAAATATCAATCGGATGCATTAGGATATATTCTCGGAATCTATTCCCCGACTATCTGATACCCGTTACTCAGCTATTGGAAGTGCCCAGAAGAGTCAGAGTCTTCAACACTGACAGTTTTTGGCGGTTTGTGGGC
****************************************************..((((((((((..((((((..((((....))))....))))))..))........................)))))))).........************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V120
male body		 M026
head
 M056
embryo
..........GGGTTACGCCACATTCCCATTCGTT........................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0
.............................TTCGTTCTGCTTGAATTTATGGGCA..................................................................................................................................................................................................... 25 2 1 1.00 1 0 0 1 0
.........................................................................................................................................................................................CAGCTATTGGAAGTGCCCAGAA............................................ 22 0 1 1.00 1 0 1 0 0
............GTTACGCCACATTCCCATTCGTTCTG..................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................AGCTATTGGAAGTGCCCAGAAGAGT........................................ 25 0 1 1.00 1 0 1 0 0
....................................................AAGTCTGATTTGGAAATTCGA.................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0
................................GTTCTGCTTGAATTTATGG........................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0
...........GGTTACGCCACATTCCCATTCGTTCT...................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
.................GCCACATTCCCATTCGTTCTG..................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.......................................................................................................................ATATCAATCGGATGCATTAGGA.............................................................................................................. 22 0 1 1.00 1 0 0 0 1
...................................CTGCTTGAATTTATGGGC...................................................................................................................................................................................................... 18 2 12 0.67 8 0 0 8 0
.................................................GGTAACTCTGATTTGGAAAA...................................................................................................................................................................................... 20 2 2 0.50 1 0 1 0 0
..........................................................................................................................................................................................................................TTCAACACTGACAGTTTTTGGCGG......... 24 0 20 0.25 5 0 0 0 5
.............................................................................................................................................................................................................................AACACTGACAGTTTTTGGCGG......... 21 0 20 0.15 3 0 3 0 0
.............................................................................................................................................................ATTCCCCGACTATCTGATACCC........................................................................ 22 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

CGCAGCATGACCCAATGCGGTGTAAGGGTAAGCAAGACGAACTTAAATACCATTCAGACTAAACCTTTAAGCTTATATGTATATATGGCTACTCAATTGTTCCTTTGTACGTTTGTATTTATAGTTAGCCTACGTAATCCTATATAAGAGCCTTAGATAAGGGGCTGATAGACTATGGGCAATGAGTCGATAACCTTCACGGGTCTTCTCAGTCTCAGAAGTTGTGACTGTCAAAAACCGCCAAACACCCG
**************************************************************************************************************..((((((((((..((((((..((((....))))....))))))..))........................)))))))).........**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M056
embryo
 GSM1528802
follicle cells		 M043
female body
 V046
embryo
 M026
head
 V120
male body
.............................................................................................................................................................................................................................TTGTGACTGTCAAAAACCGCCAAACAC... 27 0 20 2.25 45 45 0 0 0 0 0
.........................................................................................................................................................................................................................GAAGTTGTGACTGTCAAAAACCGCCAA....... 27 0 20 1.70 34 0 34 0 0 0 0
..............................................................................................................................................................................................................................TGTGACTGTCAAAAACCGCCAAACAC... 26 0 20 0.20 4 0 0 0 4 0 0
.........................................................................................................................................................................................................................GAAGTTGTGACTGTCAAAAACCGCCA........ 26 0 20 0.20 4 3 0 1 0 0 0
.........................................................................................................................................................................AGACTATGGGCAATGAGTCGATAAC......................................................... 25 0 20 0.15 3 3 0 0 0 0 0
..............................................................................................................................................................AAGGGGCTGATAGACTATGG......................................................................... 20 0 20 0.10 2 0 0 0 0 2 0
........................................................................................................................................................TTACACAAGGGGCTGATAGACTAT........................................................................... 24 2 12 0.08 1 1 0 0 0 0 0
.................................................CCATTCCGATTAAACCCTTA...................................................................................................................................................................................... 20 3 13 0.08 1 0 0 1 0 0 0
...................................................................................................................................................................................CAATGAGTCGATAACCTTCAC................................................... 21 0 20 0.05 1 0 0 1 0 0 0
.............................................................................................................................................................................................................................TTGTGACTGTCAAAAACCGCCAA....... 23 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................GACTATGGGCAATGAGTCGATAA.......................................................... 23 0 20 0.05 1 0 0 0 0 0 1
.................................................................................................................................................................................GGCAATGAGTCGATAACCTTC..................................................... 21 0 20 0.05 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2L:18557714-18557964 - dya_369 GCG-------------TCGTA----------CTGGGTTACG---CCACATTCCCATTCGTTCTGCTTGAATTTATGGTAAG----------------------TCTGATTTGGAAATTCGAATATACATA--------------------T--------ATAC-----------------CG-A-TG-------AGTTAAC--AAG-----------------------------------------------------------------------------GAA----ACA-------------------------------------------TGCAA--ACATAAATATCAATCG---------------------------------------------------------------------------------------------------------------------------------------G-------ATGCATTAGGATATATTCTCGGAATCTA-TTCCCCGACTATCTGATACCCGTTACTCAGCTATTGGAAGTGCCCAGAAGAGTCAGAGTCTTCAACA-------------------------------------CTGA---------------------------------------------CAGTT----TTTGGCGGTTT--------GT------------GGGC
droEre2 scaffold_4770:5491867-5492044 + GT----------------------------------------------------------TCTGCTTGAACTTATGCAT------------------------------------------------------------------------AGAAGTGAAACCAATACTTATGTGTAGTACG-A-TA-------AATTGCCAA--AGAA---------------------------------------------------------------------------------AGA-------------------------------------------TA---------------------------------------------T-------------------------C---------------------------------------------------------------------------------AACAAGATAAAATGCTATAG---------------GGGAGATCCCCGACTATCAGATACCCGTTACTCAGGTAGAGAAGGAGCA------AACTGGAAATTTCAACATG-----------------------------------------------------------------------------------------------TTCTGGTAT--------AT------------AGGT
droSec2 scaffold_8:2678148-2678368 - GCG-------------TCGAGCACC------ATGAATTATGTATTTACTTTGCCATTTTTTCTGGTCGTACAA----------------ATTAGTAAAATATGCTTGG------------CATATACATC--------------------C--------ATAT-----------------TGTAT--GTGTATG------C--AAA-----------------------------------------------------------------------------AAAAAAAATGTG-----------------------------------------TATAC--AAAATAATA-------------------------------------------------------CAA---------------------------------------------------------------------------------AACAAGAGAGAATGCTATAA---------------TCTAGTTCCCCGACTATCAGATACCCTTTACCCAGCTAGTGTGAATGCG------CACGCGAAATTTCATCATT----------------------------------------------------------------------------------------------------------------------------------
droSim2 node_8654:14650-14947 + ACT-------------TGGTC-----------------AGG---CTGGGTACACATTCACTTTATT------------------------------------------------------------------------------------------------------------------------------------GTCAA--AGAACTATGGA------------------------TTTATAACGAGTTTTTTTTCGGTATCCCACCAGATGCGCCAATC--AAATATTAAGG---------------------------------------TATTC--AATAAAATAA-------------------------------------------------------AAAA-----------------------------------C------------------------------------------------------AAGCTATAG---------------TCAAGTTTCGCGACTATCAGATACCCTTTACTCAGCTGATGTAAATGCG------AACGAGCAATTTCATTTTTTTTTTCAGGAATATAGTTACAATATCTA-----------TAGTTA----------CAAAATTTAACAATTGTTCAAAAGTGTGTCAGTT----TTAGGCGGCTT--------GTAGGCGAAAGAGTGGGC
dm3 chr2R:795824-796079 - GTT-------------CTTAT----------TGA-----AA---TCATAATACCATCTGCAATGGC-----------------------------------------------------------------------------------------------------------------------------------------------ATATCGATTATAAACGCTTTATTAGTTTATATTTGAAACGA----------------------------------------ATT-------------------------------------------TGCTA--ACGTTAACGGTATTAA----------------------------------------------AATAT---------------------------------------------------------------------------------AACAAGAGAGAATGTTATTG---------------TGGAGT-TCCTGACTATCAAATACCAGTTACTCAGCTAGTGGAAATGCG------AACGCGAAATGTAATTATT---TTCTGGAATA----------------------TCGATAGATATTGGGGAATAAAAGGATAAAAAATTCT---------------------AAAAATGTTTT--------GA------------TGGT
droEug1 scf7180000409733:10234-10413 - TCC-------------GATTT----------GAA----------------------------------------------------------------------------------------------------------------------AA-------------------------------AT-------CT---TT--GAT-----------------------------------------------------------------------------AAATC---GATAGATATTAACAGAAATAAGTTACACAAGGTCGTATGAAGGCATTCAT----AATAATAT-------------------------------------------------------TATA-----------------------------------G------------------------------------------------------ACGCCACAGATTATACTTTC--------------TGAATTTCAACTTT--TTAACTCCAATAG----------------TTCCTGAGATTTCAGCA-------------------------------------ATTT---------------------------------------------TAGTT----TTTTGCGATTT--------AT------------GGGC
droBia1 scf7180000302069:88897-89201 - TTTCCATTCGTTCCTATGGCA------------------------------------------GCTATAAATTATAGTCGT----------------------TCA----------AA-------------------------------------------------------------A-------TTCTAAATTATTAA-A--ATAA---------------------------------------------------------------------------------TGA-------------------------------------------TA---------------------------------------------TTCTCAAGACCAAAAGTTAAATGGCAGAACAAAAAAA------------------------TAACAATTATTTTAACAATTTTAAAAATATTTT--ATTTT-------------------ATCTATAG---------------TCGATTGCCTCTACTATCAGATACCCGTTACTCAGCTTATGGGAG--CA------AAGGGATAATGAA-------------GATATATAGGCAGAATAGCGA-----------TATTTA----------AGGGCGCCACCTATGG---------GTGGCAGACAGATTTAAGCGTTTTGGCCATTTGTGGGCATTAGAGTGGAC
droTak1 scf7180000415977:25022-25250 - ATT-------------CAGTC-TACGTGACTGTAAGTTAAG---TTATATTCTTA-----------------------------------------------------------AGATT----TGATACACTTGTTGTTGGTCTCATATAGAGA-------------------------------AG-------AT---TC--AAT-----------------------------------------------------------------------------AAATAAAGCATATA---------------------------------------TATAA--AA--------------------------------------------------------------AAA---------------------------------------------------------------------------------AACAAGAGAGAACGCTATAG---------------TCGGGTGCCCCGACTATCAGATACCCGTTACTCAGCTAAGGGAAGTGCG------AAGGAG--ATGGA-------------GAA--AA----------ACTTTGATCCGCCGT---------------------------------------------AACTT----TTTAACGAATG--------GT------------CCGA
droEle1 scf7180000488370:67874-68004 - TTC-------------GAATG----------CAAACGTA---------------------------------------------------------------------------------------------------------------TAGA-------------------------------AG-----------------------------------------------------------------------------------------AACATATC--AAAAGGATACG---------------------------------------TAAAA--AGTTAAACAAAAAGCGGTTTTAACAATTTTTAATAA------------------------------------------------------------------------------------------------------------------------TTTACGAAAAAG---------------CCATTTTCCCCGACTATAAGATACCCGTTACGCAGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000777966:20422-20668 + TAG-------------GCAAT----------C-GATTTGCA---TT-AAGCCCTTTTCATTCTACTTCAATTTACTGTCGGGTATTTTATTTAA----------------------AAA----GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCTTAAGCATTTTTAAGAAAGAAAGCTCAACATGAAAAGATTAATATCAA---------------------------------------------------------------------------------AACAAGAGAGAACGCTATAG---------------TCGGGTGCCCCGACTATCAGATACCCGTTACCCAGGTAAAGGGAGTGCG------AGGGA--GATGGA-------------GACATAA----------ACTTTGATCACGCAT---------------------------------------------AACTT----TTTAACGAATG--------GT------------CCGA
droFic1 scf7180000449699:30733-30915 - TAT-------------ACATA---------------------------------------------------------------------------------------------------------------------------------T--------ATACAGTA------------A-------TTATATGTTATTAT--ATT-----------------------------------------------------------------------------ATA----AAA-------------------------------------------TTCATAAGCTTAAA-----------------CATCTT----------------------------AAACAGCTGCATTAGAACAGTCCTCATCACTGTGATGTTTATTTAGCTATTTATG-TACTATATTTAAGCTATTTTGGATATTAGGAATAAACAAGAGGGAACG----------------------------------CTATCAGATACCCGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGC
droKik1 scf7180000302386:312960-313019 - GCG-------------TCGTC----------CTGGGCTACG---CCACATTCCCATTCGTTCTGCTTGAATTTATGGTGAG----------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAA
droAna3 scaffold_13266:6101795-6101849 + GGG-------------TCACA----------CTAGGCTACG---CCACATTCCCATTCGTTCTGCTTGAATTTATGGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395303:5945-6031 - TTT-------------CCCGA----------CTATATTATA---CCCGGTACTCATCTCTTCGACCCAAAATTAAAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTTAAAG-------------------------------------CTTG---------------------------------------------AAC------TTTAACGGCAT--------GG------------ATTC
dp5 3:6139530-6139585 - GCA-------------TTGTG----------ATGGGCTATG---CCACATTCCCATTCGTTCTGCTTGAATTTATGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGT
droPer2 scaffold_2:6354426-6354480 - GCA-------------TTGTG----------ATGGGCTATG---CCACATTCCCATTCGTTCTGCTTGAATTTATGGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004949:1987174-1987261 - TAC-------------AGTAC----------A-----------------------------------------------------------------------GTTGATATGTGCACACATACATACATA--------------------C--------ATA--------------------------CATATGTAGATAC--ATA-----------------------------------------------------------------------------AAA----ATA-------------------------------------------TGCAC--ATGTATATGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-----------------------------------------------------------------------------------------------------------------C--------GA------------ACGC
droVir3 scaffold_13047:8547787-8547883 - TTT-------------TGGCA----------ACTGTCAGCT---ATGGAA---------------------------------------ATTGG----------------------AAA----ATATATATATATATATGTACCCATATAAA----------------------------------------TG------C--A------------------------------------------------------------------------------------------------------------------------------------AAAAA--ATAGAAACAGCAAATG---------------------------------------------------------------------------------------------------------------------------------------T-------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--------AT------------AAAG
droMoj3 scaffold_6496:379618-379682 + GCA-------------TCGTG----------ATGGGCTACA---CCACATTCCCATTTGTTATGCTTGAATTTATGGTATG----------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT--------TT------------GGAA
droGri2 scaffold_15245:5743525-5743579 + GCA-------------TGGTG----------ATGGGCTATG---CAACATTCCCATTTGTTCTGCTTGAATTTATGGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
GCG-------------TCGTA----------CTGGGTTACG---CCACATTCCCATTCGTTCTGCTTGAATTTATGGTAAG----------------------TCTGATTTGGAAATTCGAATATACATA--------------------T--------ATAC-----------------CG-A-TG-------AGTTAAC--AAG-----------------------------------------------------------------------------GAA----ACA-------------------------------------------TGCAA--ACATAAATATCAATCG---------------------------------------------------------------------------------------------------------------------------------------G-------ATGCATTAGGATATATTCTCGGAATCTA-TTCCCCGACTATCTGATACCCGTTACTCAGCTATTGGAAGTGCCCAGAAGAGTCAGAGTCTTCAACA-------------------------------------CTGA---------------------------------------------CAGTT----TTTGGCGGTTT--------GT------------GGGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................GGGTTACG---CCACATTCCCATTCGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTATTGGAAGTGCCCAGAA......................................................................................................................................................2211.00100000010000
...................................GTTACG---CCACATTCCCATTCGTTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTATTGGAAGTGCCCAGAAGAGT..................................................................................................................................................2511.00100000010000
..............................................................................AAG----------------------TCTGATTTGGAAATTCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........................................................GTTCTGCTTGAATTTATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..................................GGTTACG---CCACATTCCCATTCGTTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
........................................G---CCACATTCCCATTCGTTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................ATATCAATCG---------------------------------------------------------------------------------------------------------------------------------------G-------ATGCATTAGGA.........................................................................................................................................................................................................................2211.00100100000000
.............................................................CTGCTTGAATTTATGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18120.67880000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAACA-------------------------------------CTGA---------------------------------------------CAGTT----TTTGGCGG.............................24200.25500500000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------------------------------CTGA---------------------------------------------CAGTT----TTTGGCGG.............................21200.15300000030000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TTCCCCGACTATCTGATACCC..................................................................................................................................................................................22200.05101000000000
droEre2
GT----------------------------------------------------------TCTGCTTGAACTTATGCAT------------------------------------------------------------------------AGAAGTGAAACCAATACTTATGTGTAGTACG-A-TA-------AATTGCCAA--AGAA---------------------------------------------------------------------------------AGA-------------------------------------------TA---------------------------------------------T-------------------------C---------------------------------------------------------------------------------AACAAGATAAAATGCTATAG---------------GGGAGATCCCCGACTATCAGATACCCGTTACTCAGGTAGAGAAGGAGCA------AACTGGAAATTTCAACATG-----------------------------------------------------------------------------------------------TTCTGGTAT--------AT------------AGGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droSec2
GCG-------------TCGAGCACC------ATGAATTATGTATTTACTTTGCCATTTTTTCTGGTCGTACAA----------------ATTAGTAAAATATGCTTGG------------CATATACATC--------------------C--------ATAT-----------------TGTAT--GTGTATG------C--AAA-----------------------------------------------------------------------------AAAAAAAATGTG-----------------------------------------TATAC--AAAATAATA-------------------------------------------------------CAA---------------------------------------------------------------------------------AACAAGAGAGAATGCTATAA---------------TCTAGTTCCCCGACTATCAGATACCCTTTACCCAGCTAGTGTGAATGCG------CACGCGAAATTTCATCATT----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------------------------------------------------------------AACAAGAGAGAATGCT...............................................................................................................................................................................................................................18200.0510010
droSim2
ACT-------------TGGTC-----------------AGG---CTGGGTACACATTCACTTTATT------------------------------------------------------------------------------------------------------------------------------------GTCAA--AGAACTATGGA------------------------TTTATAACGAGTTTTTTTTCGGTATCCCACCAGATGCGCCAATC--AAATATTAAGG---------------------------------------TATTC--AATAAAATAA-------------------------------------------------------AAAA-----------------------------------C------------------------------------------------------AAGCTATAG---------------TCAAGTTTCGCGACTATCAGATACCCTTTACTCAGCTGATGTAAATGCG------AACGAGCAATTTCATTTTTTTTTTCAGGAATATAGTTACAATATCTA-----------TAGTTA----------CAAAATTTAACAATTGTTCAAAAGTGTGTCAGTT----TTAGGCGGCTT--------GTAGGCGAAAGAGTGGGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................AGAACTATGGA------------------------TTTATAACGAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.................................................................................................................................................................................................................CTATGGA------------------------TTTATAACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.50100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGACTATCAGATAC....................................................................................................................................................................................16110.27300000030000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAGATACCCTTTACTCAGCT.......................................................................................................................................................................23160.13200000010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTATCAGATACCCTTTAC.............................................................................................................................................................................21200.05100000010000000000
dm3
GTT-------------CTTAT----------TGA-----AA---TCATAATACCATCTGCAATGGC-----------------------------------------------------------------------------------------------------------------------------------------------ATATCGATTATAAACGCTTTATTAGTTTATATTTGAAACGA----------------------------------------ATT-------------------------------------------TGCTA--ACGTTAACGGTATTAA----------------------------------------------AATAT---------------------------------------------------------------------------------AACAAGAGAGAATGTTATTG---------------TGGAGT-TCCTGACTATCAAATACCAGTTACTCAGCTAGTGGAAATGCG------AACGCGAAATGTAATTATT---TTCTGGAATA----------------------TCGATAGATATTGGGGAATAAAAGGATAAAAAATTCT---------------------AAAAATGTTTT--------GA------------TGGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
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OSC		V145
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........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACTCAGCTAGTGGAAA...............................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCAGCTAGTGGAAATGCG------AACGTT...............................................................................................................................................27100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA----------------------TCGATAGATATTGGGGAATA...........................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATAGATATTGGGGAATAAA.........................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---TTCTGGAATA----------------------TCGATAGATAT....................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---TTCTGGAATA----------------------TCGATAGATT.....................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTCAGCTAGTGGAAAT..............................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATA----------------------TCGATAGATATTGGG................................................................................20110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACTCAGCTAGTGGAAATGC............................................................................................................................................................22110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTCAGCTAGTGGAAATGCG------A....................................................................................................................................................23110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---TTCTGGAATA----------------------TCGATAGATATTGG.................................................................................26110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
TCC-------------GATTT----------GAA----------------------------------------------------------------------------------------------------------------------AA-------------------------------AT-------CT---TT--GAT-----------------------------------------------------------------------------AAATC---GATAGATATTAACAGAAATAAGTTACACAAGGTCGTATGAAGGCATTCAT----AATAATAT-------------------------------------------------------TATA-----------------------------------G------------------------------------------------------ACGCCACAGATTATACTTTC--------------TGAATTTCAACTTT--TTAACTCCAATAG----------------TTCCTGAGATTTCAGCA-------------------------------------ATTT---------------------------------------------TAGTT----TTTTGCGATTT--------AT------------GGGCSizeHit CountTotal NormTotal
No Reads
droBia1
TTTCCATTCGTTCCTATGGCA------------------------------------------GCTATAAATTATAGTCGT----------------------TCA----------AA-------------------------------------------------------------A-------TTCTAAATTATTAA-A--ATAA---------------------------------------------------------------------------------TGA-------------------------------------------TA---------------------------------------------TTCTCAAGACCAAAAGTTAAATGGCAGAACAAAAAAA------------------------TAACAATTATTTTAACAATTTTAAAAATATTTT--ATTTT-------------------ATCTATAG---------------TCGATTGCCTCTACTATCAGATACCCGTTACTCAGCTTATGGGAG--CA------AAGGGATAATGAA-------------GATATATAGGCAGAATAGCGA-----------TATTTA----------AGGGCGCCACCTATGG---------GTGGCAGACAGATTTAAGCGTTTTGGCCATTTGTGGGCATTAGAGTGGACSizeHit CountTotal NormTotal
No Reads
droTak1
ATT-------------CAGTC-TACGTGACTGTAAGTTAAG---TTATATTCTTA-----------------------------------------------------------AGATT----TGATACACTTGTTGTTGGTCTCATATAGAGA-------------------------------AG-------AT---TC--AAT-----------------------------------------------------------------------------AAATAAAGCATATA---------------------------------------TATAA--AA--------------------------------------------------------------AAA---------------------------------------------------------------------------------AACAAGAGAGAACGCTATAG---------------TCGGGTGCCCCGACTATCAGATACCCGTTACTCAGCTAAGGGAAGTGCG------AAGGAG--ATGGA-------------GAA--AA----------ACTTTGATCCGCCGT---------------------------------------------AACTT----TTTAACGAATG--------GT------------CCGASizeHit CountTotal NormTotal
No Reads
droEle1
TTC-------------GAATG----------CAAACGTA---------------------------------------------------------------------------------------------------------------TAGA-------------------------------AG-----------------------------------------------------------------------------------------AACATATC--AAAAGGATACG---------------------------------------TAAAA--AGTTAAACAAAAAGCGGTTTTAACAATTTTTAATAA------------------------------------------------------------------------------------------------------------------------TTTACGAAAAAG---------------CCATTTTCCCCGACTATAAGATACCCGTTACGCAGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TAG-------------GCAAT----------C-GATTTGCA---TT-AAGCCCTTTTCATTCTACTTCAATTTACTGTCGGGTATTTTATTTAA----------------------AAA----GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCTTAAGCATTTTTAAGAAAGAAAGCTCAACATGAAAAGATTAATATCAA---------------------------------------------------------------------------------AACAAGAGAGAACGCTATAG---------------TCGGGTGCCCCGACTATCAGATACCCGTTACCCAGGTAAAGGGAGTGCG------AGGGA--GATGGA-------------GACATAA----------ACTTTGATCACGCAT---------------------------------------------AACTT----TTTAACGAATG--------GT------------CCGASizeHit CountTotal NormTotal
No Reads
droFic1
TAT-------------ACATA---------------------------------------------------------------------------------------------------------------------------------T--------ATACAGTA------------A-------TTATATGTTATTAT--ATT-----------------------------------------------------------------------------ATA----AAA-------------------------------------------TTCATAAGCTTAAA-----------------CATCTT----------------------------AAACAGCTGCATTAGAACAGTCCTCATCACTGTGATGTTTATTTAGCTATTTATG-TACTATATTTAAGCTATTTTGGATATTAGGAATAAACAAGAGGGAACG----------------------------------CTATCAGATACCCGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGCSizeHit CountTotal NormTotal
No Reads
droKik1
GCG-------------TCGTC----------CTGGGCTACG---CCACATTCCCATTCGTTCTGCTTGAATTTATGGTGAG----------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAASizeHit CountTotal NormTotal
No Reads
droAna3
GGG-------------TCACA----------CTAGGCTACG---CCACATTCCCATTCGTTCTGCTTGAATTTATGGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................CTAGGCTACG---CCACATTCCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..................ACA----------CTAGGCTACG---CCACATTCCCATTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
...................CA----------CTAGGCTACG---CCACATTCCCATTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..............................................ACATTCCCATTCGTTCTGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...................CA----------CTAGGCTACG---CCACATTCCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....................................CTACG---CCACATTCCCATTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...........................................................TTCTGCTTGAATTTATGGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................2040.251100000
.............................................................CTGCTTGAATTTATGGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................18160.061010000
droBip1
TTT-------------CCCGA----------CTATATTATA---CCCGGTACTCATCTCTTCGACCCAAAATTAAAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTTAAAG-------------------------------------CTTG---------------------------------------------AAC------TTTAACGGCAT--------GG------------ATTCSizeHit CountTotal NormTotal
No Reads
dp5
GCA-------------TTGTG----------ATGGGCTATG---CCACATTCCCATTCGTTCTGCTTGAATTTATGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
GCA-------------TTGTG----------ATGGGCTATG---C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.................................................TTCCCATTCGTTCTGCTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................................GCTATG---CCACATTCCCATTCGTTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.................................GGGCTATG---CCACATTCCCATTCGTTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
..........................................................GTTCTGCTTGAATTTATGGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...2120.5010000000001
.............................................................CTGCTTGAATTTATGGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...18190.0510010000000
droPer2
GCA-------------TTGTG----------ATGGGCTATG---CCACATTCCCATTCGTTCTGCTTGAATTTATGGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................CTATG---CCACATTCCCATTCGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.............................................................CTGCTTGAATTTATGGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................18150.538800000
............................................................TCTGCTTGAATTTATGGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................1940.251100000
.............................................................CTGCTTGAATTTATGGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................18170.061100000
droWil2
TAC-------------AGTAC----------A-----------------------------------------------------------------------GTTGATATGTGCACACATACATACATA--------------------C--------ATA--------------------------CATATGTAGATAC--ATA-----------------------------------------------------------------------------AAA----ATA-------------------------------------------TGCAC--ATGTATATGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-----------------------------------------------------------------------------------------------------------------C--------GA------------ACGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TTT-------------TGGCA----------ACTGTCAGCT---ATGGAA---------------------------------------ATTGG----------------------AAA----ATATATATATATATATGTACCCATATAAA----------------------------------------TG------C--A------------------------------------------------------------------------------------------------------------------------------------AAAAA--ATAGAAACAGCAAATG---------------------------------------------------------------------------------------------------------------------------------------T-------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--------AT------------AAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
GCA-------------TCGTG----------ATGGGCTACA---CCACATTCCCATTTGTTATGCTTGAATTTATGGTATG----------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT--------TT------------GGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................CCCATTTGTTATGCTTGAATTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
GCA-------------TCGTG----------ATGGGCTACA---CCACATTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
droGri2
GCA-------------TGGTG----------ATGGGCTATG---CAACATTCCCATTTGTTCTGCTTGAATTTATGGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:19 PM