ID:

dya_349

 Coordinate:

2L:16674764-16674914 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.5 -5.5 -5.5

Flybase annnotation

exon [dyak_GLEANR_706:11]; CDS [Dyak\GE23267-cds]; intron [Dyak\GE23267-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTCCGCCGCGTCTCCACCAAAAACGAGGTCATTTTGGCCTCGCCTCCCAAGTGGATAAATTCCTAGACTAGCTCCAGTCCTACCCCCAGTCCAAGGTTGTGCAGCTTACAAATTGTGATAAGTTCTTTAAGAGAGTTAGGATTGTGCTATATATGTATGTACATCTGTGCCTGATGTGCCAGGTCAGCGAACTCCAAGTTCGTCGACCAGTTAAGTTTTGAAAGTATTCTGCTCCCGCAGGTCTTTATGTT
********************************************************************************************......((((((((((....((.(((........))).))....)))).)))))).******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V120
male body		 M043
female body
 M056
embryo
 V058
head
 M026
head
 V052
head
..CCCCCGCGTCTCCACCA........................................................................................................................................................................................................................................ 17 1 1 2.00 2 0 0 0 2 0 0
............................................................................................................................................................................................................GACCAGTTAAGTTTTGAAAGTATT....................... 24 0 1 2.00 2 2 0 0 0 0 0
.............................................................................................................................................................................................AACTCCAAGTTCGTCGACCAGTTAAG.................................... 26 0 1 2.00 2 0 1 0 0 1 0
.................................................................................................................................AGAGAGTTAGGATTGTGCT....................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
............................................................................................AAGGTTGTGCAGCTTACAAATTGTGATAA.................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0
...............................................................................CTACCCCCAGTCCAAGGTTGTGCAGC.................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................GCCTGATGTGCCAGGTCAGCG.............................................................. 21 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................CTGTGCCTGATGTGCCAGGTC.................................................................. 21 0 1 1.00 1 0 0 1 0 0 0
......................................................................................................................................................................................................................GTTTTGAAAGTATTCTGCTCCC............... 22 0 1 1.00 1 0 0 1 0 0 0
...........................................................................................................................TCTTTAAGAGAGTTAGGATTGTGCTA...................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................AACTCCAAGTTCGTCGACCAGT........................................ 22 0 1 1.00 1 0 0 1 0 0 0
......................................................................................................................................................ATATGTATGTACATCTGTGCCTGA............................................................................. 24 0 1 1.00 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................AGTATTCTGCTCCCGCAGGTCT....... 22 0 1 1.00 1 0 0 1 0 0 0
...........................................................................................................ACAAATTGTGATAAGTTCTTTAAGAGA..................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
.................................................................................ACCCCCAGTCCAAGGTTGTGC..................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................GTGATAAGTTCTTTAAGAGAGT................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
..CCCCGGCGTCTCCACCAAA...................................................................................................................................................................................................................................... 19 2 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................................CGTCGACCAGTTAAGTTTTGAAA............................ 23 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................CTTTAAGAGAGTTAGGATTGTGCTAT..................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................................................AACTCCAAGTTCGTCGAC............................................ 18 0 1 1.00 1 0 0 0 0 1 0
.....................................................................................CCAGTCCAAGGTTGTGCAGCT................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................TCCAAGTTCGTCGACCAGTT....................................... 20 0 1 1.00 1 0 0 0 1 0 0
..CCCCGGCGTCTCCACCAA....................................................................................................................................................................................................................................... 18 2 9 0.67 6 0 3 0 0 3 0
.TCCCCGGCATCTCCACCAAA...................................................................................................................................................................................................................................... 20 3 6 0.67 4 0 3 1 0 0 0
.TCCCCGGCGTCTCCACCA........................................................................................................................................................................................................................................ 18 2 7 0.43 3 0 0 0 3 0 0
.ACCCCCGCGTCTCCACCA........................................................................................................................................................................................................................................ 18 2 9 0.33 3 0 0 0 2 0 1
.TTCCCCGCGTCTCCACCA........................................................................................................................................................................................................................................ 18 2 6 0.33 2 0 2 0 0 0 0
...CCCGGCGTCTCCACCAAA...................................................................................................................................................................................................................................... 18 2 5 0.20 1 0 1 0 0 0 0
.TCCCCCGCATCTCCACCA........................................................................................................................................................................................................................................ 18 2 12 0.17 2 0 0 0 1 0 1
GTACCCCGCATCTCCACCA........................................................................................................................................................................................................................................ 19 3 20 0.10 2 0 0 0 0 0 2
.TCCCCCGCGCCTCCACCA........................................................................................................................................................................................................................................ 18 2 12 0.08 1 0 0 0 1 0 0
...CGCCGCATCTCCACCA........................................................................................................................................................................................................................................ 16 1 13 0.08 1 0 0 0 1 0 0

Anti-sense strand reads

CAGGCGGCGCAGAGGTGGTTTTTGCTCCAGTAAAACCGGAGCGGAGGGTTCACCTATTTAAGGATCTGATCGAGGTCAGGATGGGGGTCAGGTTCCAACACGTCGAATGTTTAACACTATTCAAGAAATTCTCTCAATCCTAACACGATATATACATACATGTAGACACGGACTACACGGTCCAGTCGCTTGAGGTTCAAGCAGCTGGTCAATTCAAAACTTTCATAAGACGAGGGCGTCCAGAAATACAA
*******************************************************************************************************......((((((((((....((.(((........))).))....)))).)))))).******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M026
head
 V120
male body		 V058
head
 GSM1528802
follicle cells
........................................................................................................................................................................................GTCGATAGAGGTTCAAGCA................................................ 19 2 2 62.50 125 106 13 5 1 0
........................................................................................................................................................................................GTCGATAGAGGTTCAAGC................................................. 18 2 3 20.67 62 54 4 0 4 0
........................................................................................................................................................................................GTCGATAGAGGTTCAAGCAA............................................... 20 3 14 12.93 181 154 14 8 5 0
.......................................................................................................................................................................................GGTCGATAGAGGTTCAAGCA................................................ 20 3 4 6.75 27 27 0 0 0 0
.........................................................................................................................................................................................TCGATAGAGGTTCAAGCA................................................ 18 2 11 4.36 48 44 1 0 3 0
.......................................................................................................................................................................................GGTCGATAGAGGTTCAAGC................................................. 19 3 14 1.21 17 17 0 0 0 0
........................................................................................................................................................................................GTCGATAGAGGTTCAAGCAG............................................... 20 2 1 1.00 1 1 0 0 0 0
..............................................................................................AAAACACGTCGAATGTTTAACAC...................................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0
..................TTTTTGCTCCACTTAAACCGG.................................................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0
....................................................................................GGGGCAGGTTCGAACCCG..................................................................................................................................................... 18 3 20 0.85 17 0 0 0 0 17
.............................................................................................................................................................................................TAGAGGTTCAAGGAGCTGG........................................... 19 2 4 0.25 1 0 0 1 0 0
........................................................................................................................................................................................GTCGATACAGGTTCAAGCA................................................ 19 3 20 0.05 1 0 0 1 0 0
........................................................................................................................................................................................GTCGATAGAGGGTCAAGCA................................................ 19 3 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................GTCGATAGAGGTTCAAGCC................................................ 19 3 20 0.05 1 1 0 0 0 0
........................................................................................................GTATGTATCACACTATTCA................................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2L:16674714-16674964 - dya_349 GTCCGCCGCGTCTC---C-----ACCAAAAACGAGGTCATTTTGG---CCTCGCCTCCCA-----A-GTGGA---TAAATTCCTAGAC-TAG-----------CTCCAGTCCTA-------CCCCC-AGTC------CAAGGTTGT--GCAGCTTA---CA-----------------AATTGTGATAA--GTTCTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----TATA---------------TGTATGTAC---ATCTGTGCCTGAT-GTGCCAGGT---CAGCGAACTCCAAGT---TCGTCGACCAGT--TAAGTTTTGAAAGTATTCTGCTC----CC-GCAGGTC-TTTATGTT--
droEre2 scaffold_4929:18609052-18609299 + der_1358 GTCCGCCGCGTCTC---C-----ACCAAAAACGAAGTCCTTTTGG---CCTCGCCTCCCA-----A-GTGGA---TTAATTCCTAGAT-TAG-----------CTCCAGTCCTA-------GTCCC-AGTC------GAAGGTTGT--GCAGCTTA---CA-----------------AATTGTGATAC--GTTTTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----TATA---------------TGTAT-------GTCTGTGCCTGAT-GTGCCAGGT---CACCGAGCTCCAAGT---TCGTCGACCAGT--TAATTTTCGAAAGTATTCTGCTC----CCAGCAGGTC-TTTATGTT--
droSec2 scaffold_1:1663487-1663734 - GTCCGCCGCGTCTC---C-----ACCAAAAACGAGGTCATTTTGG---CCTCGCCTCCCA-----A-GTGGA---GTAATTCCTAGAT-TAG-----------CTCCAGTCCTA-------GCCCC-AGTC------GAAGGTTGT--GCAGCTTG---CA-----------------AATTGTGATAA--GTTTTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----TACC---------------TGTAT-------GTCTGTGCCTGAT-GTGCCAGGC---CAGCGAGCTCCAAGT---TCGTCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----GCAGCAGTTC-TTTATGTT--
droSim2 2r:4842386-4842633 - GTCCGCCGCGTCTC---C-----ACCAAAAACGAGGTCATTTTGG---CCTCGCCTCCCA-----A-GTGGA---GTAATTCCTAGAT-TAG-----------CTCCAGTCCTA-------GCCCC-AGTC------GAAGGTTGT--GCAGCTTG---CA-----------------AATTGTGATAA--GTTTTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----TACC---------------TGTAT-------GTCTGTGCCTGAT-GTGCCAGGC---CAGCGAGCTCCAAGT---TCGTCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----GCAGCAGTTC-TTTATGTT--
dm3 chr2R:4025558-4025805 - GTCCGCCGCGTCTC---C-----ACCAAAAACGAAGTCATTATGG---CTTCGCCTCCCA-----A-GTGGA---TTAATTCCTAGAC-TAG-----------CTCCAGTCCTA-------GCCCC-AGTC------GAAGGTTGT--GCAGCTTG---CA-----------------AATTGTGATGT--TTTTTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----TACC---------------TGTAT-------GTCTGTGCCTGAT-GTGCCAGGT---CAGCGAGCTCCAAGT---TCGTCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----CCAGCAGGTC-TTTATGTT--
droEug1 scf7180000409474:2850763-2851016 - AACCCAAA--AATA---G-----AAAAAAAAAAAAATCATCCTTG---A-----AGGAC---------AGGC---TGAATTCCTAGGCATAC-----------CTCAAGTCCTA-------TCCCA-ACCC------GAAGGTTGT--GTAGCTAA---AA-----------------AATTGTGATAC--ATTTTCTA---A---------------G----A----CAG---TTAGGAT----T----G--T------CCTA-----TATGTTTATATATTATATATACTT-------GTATGTGCCTGAT-GTGCCAGGT---CTACGAACTAAAAGT---TCGTCGACCAGT--TAAGTTTTGAAAGTATTCTGCTC----CCAGCAGGTC-TTTATGTC--
droBia1 scf7180000302291:1878721-1878963 - GTCCGCCGCGACTC---C-----TCTAAAAACGAGGTCATCTTGG---CCTCGCCCCCCA-----A-GTGGC---TGAATTCCTAGACACCC-----------CTAGAGTCCTT-------TCCCA-CGCC------GATGGTTGT--GCAGCCTA---AA-----------------AATTGTGATAA--GTTTTCTA---A---------------A----A----GAG---TTAGGAG----T----G--T------CCTA-----TATA-------------------T-------GTCTGTGCCTGAT-GTGCCAGGT---CTGCGAGCTCTAAGT---TCGCCGACCAGT--TAAGTTTCGAAAGTATTCTGCTC----CCAGCAGTTC-TT--TGTC--
droTak1 scf7180000415088:79220-79470 + GTCCGCCGCGTCTC---C-----TCCAAAAACGAGGTCATCCTGG---CCTCGCCCCCCA-----A-GTGGT---TAAATTCCTAGACATAG-----------CTCCAGTCCTT-------TCCCAAAGCC------GAAGGTTGT--GCAGCTTG---CG-----------------AATTGTGATAA--GTTTTCTA---A---------------GAGAGA----GAG---TTAGGAG----T----G--T------CCTA-----TATA-------------------T-------GTCTGTGCCTGAT-GTGCCAGGT---CAGCGAGCTCCAAGT---TCGCCGACCAGT--TAAGTTTTGAAAGTATTCTGCTC----CCAGCAGGTCCTTTATGTC--
droEle1 scf7180000491240:825855-826120 - GTCCGCCGCGTCTC---C-----ACCAAAAACGAGGTCATCTTGG---CCTCGCCCCCCA-----A-GTGGT---TGAATTCCTAAAT-TAG-----------CCACAGTCCTA-------TCCCA-AGCC------GATGGTTGT--GCAGCCTA---CA-----------------AATTGTGATAA--GTTTTCTAAGAAAGAGAGAGAGAGAGAGAGAGA----GAG---TTAGGAG----T----G--T------CCTA-----TATA-------------------T-------GTCTGTGCCTGAT-GTGCCAGGT---CCGCGAGCTCCAAGT---TCGCCGACCAGT--TATGTTTGGAAAGTATTCTGCTC----CCAGCAGGTC-TTGATGTT--
droRho1 scf7180000770177:113314-113558 - GTCCGCCGTGTCTC---C-----ACCAAAAACGAGGTCATTTTGG---CCTCGCCCCCCA-----A-GTGGT---TGAATTCCTAGATATAG-----------CTACAGTCCTA-------TCCCA-AACC------GAAGGTTGT--GCAGCTTA---CA-----------------AATTGTGATAA--GTTTTCTA---A---------------G----A----GAG---TTAGGAG----T----G--T------CCTA-----TATA-------------------T-------GTCTGTGCCTGAT-GTGCCAGGT---CAGCGAGCTTCAAGT---TCGCCAACCAGT--TAAGTTTCGAAAGTATTCTGCTC----CCAGCAGGTC-TTTATGTC--
droFic1 scf7180000453215:181363-181616 + GTCCGTCGCGTCTC---C-----ACCAAAAACGAGCTCATCCTGG---CCCCAGGCCGCA-----A-ATT--------ATTCCTATAG--AG-----------CTCCAAACCTA-------TTCCC-AGCC------GAAGGTTGT--GCAGCTAG---CA-----------------AATTGTGATAA--GTTTTCTA---A---------------A----A----GAG---TTAGGAG----T----G--T------CCTA-----TATAT-AAT--ATCGTACCTATAT-------GTCTGTGCCTGAT-GTGCCAGGT---CCGGAAGCTCCAAGT---TCGCCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----GCAGCAGCTT-TTTATGTC--
droKik1 scf7180000302476:1442295-1442545 + GTGCGCCGCGAGTCGGCC-----ACCAAGAACAAGGTGGACCTGG---CCCTGGCGACCA-----G-ATGGTCGTCGAATTCCCAGACCTAG-----------TT--------------------G-AGCT------GCAGGC--T--GCAGCTGACAACA-----------------AATTGTGATAA--GTTTTCTA---A---------------C----A----GAG---TTAGGAG----T----G--T----GTCCTA-----TATACTA----GTTATAT----AT--ACCATAAATG----TGA--GTGCCAGAT---CTGCAAACTCCAAGT---TTGCGGACCAGT--TAAGTTTGGAAAGTATTCTGCA-----ATAGCAGGTC-TTTATGTT--
droAna3 scaffold_13266:16338151-16338381 - GTCCGCCGGGTCTC---G-----ACCAAGACCGAGGTGGTCCTCG---CCTCGCCACCCA-----A-ATGGT---CAAATTCCTAGGC-CCT------------GAAGGTCC-------------------------------TGT--GCTGAAGA---CA-------------AATGAAATGTGATAA--GTT--------A---------------G----G----AAG---TTAGGAAGAAGG----ATGT------CCTGTCCTGTTT---T----GTTGTTT---------------------------TTGTCGGCC---GAG-GAG--TGTCGGTGTCGGCCGATCAGT--TGTGTTTGAAAAGTATTCTGCTC----CGAGCAGGTC-TTCATGTTGT
droBip1 scf7180000395838:126533-126760 + GTCCGGAGGGTCTC---G-----ACCAAGACCGAGGTGGTCCTCG---CCTCGCCCCCCA-----A-ATGGT---CAAATTCCTAGGCCCAG-----------TTCCAGCCCAAGCAAGTCTCCCC-AGCC---CAAGAAGGTTGT--GCAGCTGA---CA-------------AATTAAATGTGATAA--GTT-----------------------------------AG---TTAGGAG-GAGT----A--T----GTCCTG-----TTTG--------TTG-------TT-------GTGTGT----------------------------------------GCCGATCGGT--TATGTTTGAAAAGTATTCTGCTC----CGAGCAGGTC-TTCATGTTGT
dp5 3:7781682-7781977 + AGCCGCCGTGTGTC---G-----ACCAAGAACGAAGTGGCCTTGCTGCCCTCACACGGCAACCTAACTTGGC---TGGATTCCTAGAC-CATGTAAC-CATAACCAGAACCCTG-------CCCTA-GTCCTTCTTAGAAGGTTGTGGGCAGCTGG---AATGAAATGATGATGAATGAATTGTGATAAGAGTTTTCTG---A---------------G----A----GAGCTATTAGGAG----T----G--TCCGTG-----TCCCATGT--TT----GTTGTGT-----------------------AGTAGTGCCGGG--------GG--GCGAAGC---TCTCGGGCCAGTCGTAAGTTTTGAAAGTATTTTGCTCAGCAGCAGCAGGCC-TAAATGTT--
droPer2 scaffold_4:1691867-1692162 + AGCCGCCGTGTGTC---G-----ACCAAGAACGAAGTGGCCTTGCTGCCCTCACACGGCAACCTAACGTGGC---TGGATTCCTAGAC-CATGTAAC-CATAACCAGAACCCTG-------CCCTA-GTCCTTCTTAGAAGGTTGTGGGCAGCTGG---AATGAAATGATGATGAATGAATTGTGATAAGAGTTTTCTG---A---------------G----A----GAGCTATTAGGAG----T----G--TCCGTG-----TCCCATGT--TT----GTTGTGT-----------------------AGTAGTGCCGGG--------GG--GCGAAGC---TCTCGGGCCAGTCGTAAGTTTTGAAAGTATTTTGCTCAGCAGCAGCAGGCC-TAAATGTT--
droWil2 scf2_1100000004954:2824171-2824434 - dwi_3718 -----CCGCGTGTC---T-----GCCAAAAACGAAGTGCTATTGG---TCAATAGGGATA-ATTGGCTTGAC---CACGTTCCTATATGTAG----AGACTAAGCGGGGTACTC-------GC---------------ATGGTTGT--TC---TAACAAT-----CTGCTCGAGCCTGAATTGTGATAA--GATTTTTGATAA---------------GAGAAGAAGAGAG---AAAGATT----AGCTTT--T------TGTC-----TGTT---------------TGTAT-------ATTTAAAGTAAGT-GTTTTACACCGCGTGCCAAGACCAAGT---CTTT-------T--GAATTATGGAAAGTATTCTAC-----------ATGTT-TTTTAGTC--
droMoj3 scaffold_6496:8928878-8928935 + GACAGACATGGTG-----------CCAAAAATGAGATATTACTAG---AATCGCCAACAA-----A-ATGGC---TAAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:14940828-14940895 - GCCTCATAATGACTCACCATGGGGCCAAAAATGAAATAATATTAT---CCTCACCACCCA-----A-ATGGC---TAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
GTCCGCCGCGTCTC---C-----ACCAAAAACGAGGTCATTTTGG---CCTCGCCTCCCA-----A-GTGGA---TAAATTCCTAGAC-TAG-----------CTCCAGTCCTA-------CCCCC-AGTC------CAAGGTTGT--GCAGCTTA---CA-----------------AATTGTGATAA--GTTCTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----TATA---------------TGTATGTAC---ATCTGTGCCTGAT-GTGCCAGGT---CAGCGAACTCCAAGT---TCGTCGACCAGT--TAAGTTTTGAAAGTATTCTGCTC----CC-GCAGGTC-TTTATGTT--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................GACCAGT--TAAGTTTTGAAAGTATT...............................2412.00200000020000
...........................................................................................................................................................................................................................................................................................................................................AACTCCAAGT---TCGTCGACCAGT--TAAG............................................2612.00211000000000
..........................................................................................................................................................................................................A---------------G----A----GAG---TTAGGAT----T----G--T------GCT...............................................................................................................................................1911.00100000010000
..........................................................................................................................................AAGGTTGT--GCAGCTTA---CA-----------------AATTGTGATAA--.......................................................................................................................................................................................................................2911.00100000010000
...............................................................................................................CTA-------CCCCC-AGTC------CAAGGTTGT--GCAGC.............................................................................................................................................................................................................................................................2611.00100000010000
..................................................................................................................................................................................................................................................................................................................GCCTGAT-GTGCCAGGT---CAGCG...........................................................................2111.00101000000000
..............................................................................................................................................................................................................................................................................................................CTGTGCCTGAT-GTGCCAGGT---C...............................................................................2111.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTTTGAAAGTATTCTGCTC----CC-..................2211.00100100000000
.................................................................................................................................................................................................TCTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----.........................................................................................................................................2611.00100000010000
...........................................................................................................................................................................................................................................................................................................................................AACTCCAAGT---TCGTCGACCAGT--................................................2211.00100100000000
..............................................................................................................................................................................................................................................................................ATA---------------TGTATGTAC---ATCTGTGCCTGA..............................................................................................2411.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................AGTATTCTGCTC----CC-GCAGGTC-T.........2211.00100100000000
...........................................................................................................................................................A---CA-----------------AATTGTGATAA--GTTCTTTA---A---------------G----A----GA................................................................................................................................................................................2711.00101000000000
.................................................................................................................A-------CCCCC-AGTC------CAAGGTTGT--GC................................................................................................................................................................................................................................................................2111.00100000010000
......................................................................................................................................................................................GTGATAA--GTTCTTTA---A---------------G----A----GAG---T...........................................................................................................................................................................2211.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................CGTCGACCAGT--TAAGTTTTGAAA....................................2311.00100000010000
..................................................................................................................................................................................................CTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----T........................................................................................................................................2611.00101000000000
...........................................................................................................................................................................................................................................................................................................................................AACTCCAAGT---TCGTCGAC......................................................1811.00110000000000
............................................................................................................................CC-AGTC------CAAGGTTGT--GCAGCT............................................................................................................................................................................................................................................................2111.00101000000000
..............................................................................................................................................................................................................................................................................................................................................TCCAAGT---TCGTCGACCAGT--T...............................................2011.00100000100000
droEre2
GTCCGCCGCGTCTC---C-----ACCAAAAACGAAGTCCTTTTGG---CCTCGCCTCCCA-----A-GTGGA---TTAATTCCTAGAT-TAG-----------CTCCAGTCCTA-------GTCCC-AGTC------GAAGGTTGT--GCAGCTTA---CA-----------------AATTGTGATAC--GTTTTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----TATA---------------TGTAT-------GTCTGTGCCTGAT-GTGCCAGGT---CACCGAGCTCCAAGT---TCGTCGACCAGT--TAATTTTCGAAAGTATTCTGCTC----CCAGCAGGTC-TTTATGTT--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................TGTGATAC--GTTTTTTA---A---------------G----A----GA................................................................................................................................................................................2112.0020000110
........................................................................................................................................................................................................................................................................................................................................................................ATTTTCGAAAGTATTCTGCTC----CCA..................2411.0011000000
.................................................................................................................................TC------GAAGGTTGT--GCAGCTTA---CA-----------------A...................................................................................................................................................................................................................................2211.0011000000
............................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGACC.....................................................1811.0010000010
.............................................................................................................................C-AGTC------GAAGGTTGT--GCAGCTTA---CA-----------------....................................................................................................................................................................................................................................2411.0011000000
......................................................................................................................................................................................................................................................................................................................GAT-GTGCCAGGT---CACCGAGCT.......................................................................2111.0010010000
...........................................................................................................................................................................................................................................................................................................................................AGCTCCAAGT---TCGTCGACC.....................................................1911.0010000100
..................................................................................................................................................................................AATTGTGATAC--GTTTTTTA---A---------------G----A----..................................................................................................................................................................................2211.0010000010
...........................................................................................................................................................................................AC--GTTTTTTA---A---------------G----A----GAG---TTAGGAT----.................................................................................................................................................................2311.0010000100
............................................................................................................GTCCTA-------GTCCC-AGTC------GAAGGTTGT--GCA...............................................................................................................................................................................................................................................................2711.0010000100
...........................................................................................................................CCC-AGTC------GAAGGTTGT--GCAGC.............................................................................................................................................................................................................................................................2111.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................AAAGTATTCTGCTC----CCAGCT...............2011.0011000000
..............................................................................ATTCCTAGAT-TAG-----------CTCCAG.........................................................................................................................................................................................................................................................................................................1911.0011000000
....................................................................................................................................................................................TTGTGATAC--GTTTTTTA---A---------------G----.......................................................................................................................................................................................1911.0010000100
............................................................................................................................................................................................................................................................................................................GTCTGTGCCTGAT-GTGCCAGG....................................................................................2111.0010001000
......................................................................................................................................................................................GTGATAC--GTTTTTTA---A---------------G----A----GA................................................................................................................................................................................2011.0010000100
...............................................................................................................................................................................................................................................AT----T----G--T------GCTA-----TATA---------------TGTAT-------GTCT......................................................................................................2211.0010000100
...........................................................................................................................CCC-AGTC------GAAGGTTGT--GC................................................................................................................................................................................................................................................................1811.0010000010
............................................................................................................................................................................................................................................................................................................................GCCAGGT---CACCGAGCTCCAAGT---TCGTC.........................................................2711.0011000000
........................................................................................................................................................................................GATAC--GTTTTTTA---A---------------G----A----GAG---T...........................................................................................................................................................................2011.0010000100
droSec2
GTCCGCCGCGTCTC---C-----ACCAAAAACGAGGTCATTTTGG---CCTCGCCTCCCA-----A-GTGGA---GTAATTCCTAGAT-TAG-----------CTCCAGTCCTA-------GCCCC-AGTC------GAAGGTTGT--GCAGCTTG---CA-----------------AATTGTGATAA--GTTTTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----TACC---------------TGTAT-------GTCTGTGCCTGAT-GTGCCAGGC---CAGCGAGCTCCAAGT---TCGTCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----GCAGCAGTTC-TTTATGTT--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCAGT--T...............................................2211.0010100
...................................................................................................................................................................................................TTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GC................................................................................................................................................2211.0010010
........................................................................................................................................................................................................................................................................................................................T-GTGCCAGGC---CAGCGAGCT.......................................................................1911.0010001
............................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCA....................................................1911.0010010
..............................................................................................................CCTA-------GCCCC-AGTC------GAAGGTTGT--GCA...............................................................................................................................................................................................................................................................2511.0011000
droSim2
GTCCGCCGCGTCTC---C-----ACCAAAAACGAGGTCATTTTGG---CCTCGCCTCCCA-----A-GTGGA---GTAATTCCTAGAT-TAG-----------CTCCAGTCCTA-------GCCCC-AGTC------GAAGGTTGT--GCAGCTTG---CA-----------------AATTGTGATAA--GTTTTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----TACC---------------TGTAT-------GTCTGTGCCTGAT-GTGCCAGGC---CAGCGAGCTCCAAGT---TCGTCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----GCAGCAGTTC-TTTATGTT--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................ATAA--GTTTTTTA---A---------------G----A----GAG---TTAGGAT----T----............................................................................................................................................................2614.00400400000000000000
.....................................................................................................................................................................................................................................................................CTA-----TACC---------------TGTAT-------GTCTGTGCCT................................................................................................2213.00300300000000000000
......................................................................................................................................................................................................A---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----TAC......................................................................................................................................2413.00300200000001000000
............................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCAGT--................................................2112.00200100000000001000
.................................................................................................................................................................................................TTTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GC................................................................................................................................................2412.00201000000000100000
..............................................................................................................................................................................................................................................................................ACC---------------TGTAT-------GTCTGTGCCT................................................................................................1812.00200200000000000000
.................................................................................................................................................................................................TTTTTA---A---------------G----A----GAG---TTAGGA......................................................................................................................................................................1812.00200200000000000000
.......................................................................................................................................................................................................................................................................A-----TACC---------------TGTAT-------GTCTGTGCCT................................................................................................2012.00201100000000000000
..........................................................................................................................................................................................................A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----T........................................................................................................................................2111.00100000000000001000
......................................................................................................................................................................................................................................................................TA-----TACC---------------TGTAT-------GTCTGTGCCT................................................................................................2111.00100100000000000000
..........................................................................................................................................................................................................................G----A----GAG---TTAGGAT----T----G--T------GCT...............................................................................................................................................1811.00100100000000000000
................................................................................................................................................................................................................................................................................................TGTAT-------GTCTGTGCCTGAT-GT..........................................................................................2011.00100010000000000000
................................................................................................................................................................................................TTTTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCT...............................................................................................................................................2611.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCAGT--TAAGTT..........................................2711.00100100000000000000
..........................AAAAACGAGGTCATTTTGG---C.....................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
...............................................................................................................................................................................................GTTTTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCC...............................................................................................................................................2711.00100100000000000000
......................................................................................................................................................................................................A---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----TACC---------------......................................................................................................................2511.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................AGCTCCAAGT---TCGTCGGCC.....................................................1911.00100100000000000000
.............................................................................................................................C-AGTC------GAAGGTTGT--GCAGCTT...........................................................................................................................................................................................................................................................2111.00100000000000001000
............................................................................................................................................................................................................................................................................................................GTCTGTGCCTGAT-GTGCCAGG....................................................................................2111.00100100000000000000
...............................................................................................................................................................................................................................A----GAG---TTAGGAT----T----G--T------GCTA-----TACC---------------......................................................................................................................2211.00110000000000000000
...........CTC---C-----ACCAAAAACGAGGTCA...............................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...............................................................................................................................................................................................GTTTTTTA---A---------------G----A----GAG---TTAGGAT----.................................................................................................................................................................2111.00101000000000000000
..........................................................................................................................................................................................................A---------------G----A----GAG---TTAGGAT----T----G--T------GCT...............................................................................................................................................1911.00101000000000000000
........................................................CCCA-----A-GTGGA---GTAATTCC...................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
..............................................................................................................................................................................................................................................................................................................................................................GCCAGT--TAAGTTTCGAAAGT..................................2011.00100000000000100000
............................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCA....................................................1911.00100010000000000000
..................................................................................................................................................................................................TTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCT...............................................................................................................................................2411.00101000000000000000
......................................................................................................................................................................................................................................................................TA-----TACC---------------TGTAT-------GTCTGTGCC.................................................................................................2011.00100100000000000000
.................................................................................................................................................................................................................................................................................................................TGCCTGAT-GTGCCAGGC---CAGCGA..........................................................................2311.00100000000000100000
..................................................................................................................................................................................................................................................................................................................................................................GT--TAAGTTTCGAAAGTATTCTGCTC----.....................2511.00100010000000000000
......................................................................................................................................................................................................A---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----TA.......................................................................................................................................2311.00100100000000000000
....................................................................................................................................................................................................TTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCT...............................................................................................................................................2211.00101000000000000000
dm3
GTCCGCCGCGTCTC---C-----ACCAAAAACGAAGTCATTATGG---CTTCGCCTCCCA-----A-GTGGA---TTAATTCCTAGAC-TAG-----------CTCCAGTCCTA-------GCCCC-AGTC------GAAGGTTGT--GCAGCTTG---CA-----------------AATTGTGATGT--TTTTTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----TACC---------------TGTAT-------GTCTGTGCCTGAT-GTGCCAGGT---CAGCGAGCTCCAAGT---TCGTCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----CCAGCAGGTC-TTTATGTT--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................TTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------G.................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................CCAGTCCTA-------GCCCC-AGTC------GA...........................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TACC---------------TGTAT-------GTCTGTGCCTGAT-GTGC........................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................GAGCTCCAAGT---TCGTCGGC......................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................................TTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCTA-----T........................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GCTA-----TACC---------------TGTAT-------GTCTGTGCC.................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCC.....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TCGGCCAGT--TAAGTTTCGA......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CCAGGT---CAGCGAGCTCCAAGT---TCG...........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
........................CCAAAAACGAAGTCATTATGG---CT....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TA-----TACC---------------TGTAT-------GTCTGTGCCTGAT-G...........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCA....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................................................................................................................................................................................................................................................................................................................TGAT-GTGCCAGGT---CAGCGAGCTCCA....................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................................................................GAT----T----G--T------GCTA-----TACC---------------TGTAT-------GT........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTGCCAGGT---CAGCGAGCTCCAAGT---T.............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................G---CTTCGCCTCCCA-----A-GTGGA---TT.........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TCGAAAGTATTCTGCTC----CCAG.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................................................................................................AGT---TCGTCGGCCAGT--TAAGTTTCG.......................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................................GGTTGT--GCAGCTTG---CA-----------------AATTGTGA............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCAG...................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................GCCCC-AGTC------GAAGGTTGT--GCAGCTTG---.......................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................A---TTAATTCCTAGAC-TAG-----------CTCC...........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AGTTTCGAAAGTATTCTGCTC----CCA..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GC................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................AGGAT----T----G--T------GCTA-----TACC---------------TGTAT-------GT........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GA---TTAATTCCTAGAC-TAG-----------CTCC...........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TGCCAGGT---CAGCGAGCTCCAAGT---TCGTC.........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................GTCGGCCAGT--TAAGTTTCGAAAGT..................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GTGCCTGAT-GTGCCAGGT---CAGCGA..........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TTAGGAT----T----G--T------GCTA-----TACC---------------TGT...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................A-------GCCCC-AGTC------GAAGGTTGT--..................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TCGAAAGTATTCTGCTC----CCAGCAGG.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TGATGT--TTTTTTTA---A---------------G----A----GAG---T...........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTTTTA---A---------------G----A----GAG---TTAGGAT----T----G--T------GCT...............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TAT-------GTCTGTGCCTGAT-GTGCC.......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TTAGGAT----T----G--T------GCTA-----TACC---------------TGG...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AGCTCCAAGT---TCGTCGGC......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GTCTC---C-----ACCAAAAACGAA...................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................AATTCCTAGAC-TAG-----------CTCCAGT........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....................................................................................................................................................................................................................................GAG---TTAGGAT----T----G--T------GCTA-----TACC---------------......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CGCCTCCCA-----A-GTGGA---TTAATTCCT..................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TC------GAAGGTTGT--GCAGCTTG---CA-----------------AATTG...............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CGTCGGCCAGT--TAAGTTTCGAAAGT..................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TTATGG---CTTCGCCTCCCA-----A-GTGGA---TTAATT.....................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................G-----------CTCCAGTCCTA-------GCCCC-AGT....................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TTTCGAAAGTATTCTGCTC----CCAGCAGG.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TGTAT-------GTCTGTGCCTGAT-GTGCCAGG....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................T-GTGCCAGGT---CAGCGAGCT.......................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................GCAGCTTG---CA-----------------AATTGTGAGA..........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................CCTA-------GCCCC-AGTC------GAAGGTT......................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
droEug1
AACCCAAA--AATA---G-----AAAAAAAAAAAAATCATCCTTG---A-----AGGAC---------AGGC---TGAATTCCTAGGCATAC-----------CTCAAGTCCTA-------TCCCA-ACCC------GAAGGTTGT--GTAGCTAA---AA-----------------AATTGTGATAC--ATTTTCTA---A---------------G----A----CAG---TTAGGAT----T----G--T------CCTA-----TATGTTTATATATTATATATACTT-------GTATGTGCCTGAT-GTGCCAGGT---CTACGAACTAAAAGT---TCGTCGACCAGT--TAAGTTTTGAAAGTATTCTGCTC----CCAGCAGGTC-TTTATGTC--SizeHit CountTotal NormTotal
No Reads
droBia1
GTCCGCCGCGACTC---C-----TCTAAAAACGAGGTCATCTTGG---CCTCGCCCCCCA-----A-GTGGC---TGAATTCCTAGACACCC-----------CTAGAGTCCTT-------TCCCA-CGCC------GATGGTTGT--GCAGCCTA---AA-----------------AATTGTGATAA--GTTTTCTA---A---------------A----A----GAG---TTAGGAG----T----G--T------CCTA-----TATA-------------------T-------GTCTGTGCCTGAT-GTGCCAGGT---CTGCGAGCTCTAAGT---TCGCCGACCAGT--TAAGTTTCGAAAGTATTCTGCTC----CCAGCAGTTC-TT--TGTC--SizeHit CountTotal NormTotal
No Reads
droTak1
GTCCGCCGCGTCTC---C-----TCCAAAAACGAGGTCATCCTGG---CCTCGCCCCCCA-----A-GTGGT---TAAATTCCTAGACATAG-----------CTCCAGTCCTT-------TCCCAAAGCC------GAAGGTTGT--GCAGCTTG---CG-----------------AATTGTGATAA--GTTTTCTA---A---------------GAGAGA----GAG---TTAGGAG----T----G--T------CCTA-----TATA-------------------T-------GTCTGTGCCTGAT-GTGCCAGGT---CAGCGAGCTCCAAGT---TCGCCGACCAGT--TAAGTTTTGAAAGTATTCTGCTC----CCAGCAGGTCCTTTATGTC--SizeHit CountTotal NormTotal
No Reads
droEle1
GTCCGCCGCGTCTC---C-----ACCAAAAACGAGGTCATCTTGG---CCTCGCCCCCCA-----A-GTGGT---TGAATTCCTAAAT-TAG-----------CCACAGTCCTA-------TCCCA-AGCC------GATGGTTGT--GCAGCCTA---CA-----------------AATTGTGATAA--GTTTTCTAAGAAAGAGAGAGAGAGAGAGAGAGA----GAG---TTAGGAG----T----G--T------CCTA-----TATA-------------------T-------GTCTGTGCCTGAT-GTGCCAGGT---CCGCGAGCTCCAAGT---TCGCCGACCAGT--TATGTTTGGAAAGTATTCTGCTC----CCAGCAGGTC-TTGATGTT--SizeHit CountTotal NormTotal
No Reads
droRho1
GTCCGCCGTGTCTC---C-----ACCAAAAACGAGGTCATTTTGG---CCTCGCCCCCCA-----A-GTGGT---TGAATTCCTAGATATAG-----------CTACAGTCCTA-------TCCCA-AACC------GAAGGTTGT--GCAGCTTA---CA-----------------AATTGTGATAA--GTTTTCTA---A---------------G----A----GAG---TTAGGAG----T----G--T------CCTA-----TATA-------------------T-------GTCTGTGCCTGAT-GTGCCAGGT---CAGCGAGCTTCAAGT---TCGCCAACCAGT--TAAGTTTCGAAAGTATTCTGCTC----CCAGCAGGTC-TTTATGTC--SizeHit CountTotal NormTotal
No Reads
droFic1
GTCCGTCGCGTCTC---C-----ACCAAAAACGAGCTCATCCTGG---CCCCAGGCCGCA-----A-ATT--------ATTCCTATAG--AG-----------CTCCAAACCTA-------TTCCC-AGCC------GAAGGTTGT--GCAGCTAG---CA-----------------AATTGTGATAA--GTTTTCTA---A---------------A----A----GAG---TTAGGAG----T----G--T------CCTA-----TATAT-AAT--ATCGTACCTATAT-------GTCTGTGCCTGAT-GTGCCAGGT---CCGGAAGCTCCAAGT---TCGCCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----GCAGCAGCTT-TTTATGTC--SizeHit CountTotal NormTotal
No Reads
droKik1
GTGCGCCGCGAGTCGGCC-----ACCAAGAACAAGGTGGACCTGG---CCCTGGCGACCA-----G-ATGGTCGTCGAATTCCCAGACCTAG-----------TT--------------------G-AGCT------GCAGGC--T--GCAGCTGACAACA-----------------AATTGTGATAA--GTTTTCTA---A---------------C----A----GAG---TTAGGAG----T----G--T----GTCCTA-----TATACTA----GTTATAT----AT--ACCATAAATG----TGA--GTGCCAGAT---CTGCAAACTCCAAGT---TTGCGGACCAGT--TAAGTTTGGAAAGTATTCTGCA-----ATAGCAGGTC-TTTATGTT--SizeHit CountTotal NormTotal
No Reads
droAna3
GTCCGCCGGGTCTC---G-----ACCAAGACCGAGGTGGTCCTCG---CCTCGCCACCCA-----A-ATGGT---CAAATTCCTAGGC-CCT------------GAAGGTCC-------------------------------TGT--GCTGAAGA---CA-------------AATGAAATGTGATAA--GTT--------A---------------G----G----AAG---TTAGGAAGAAGG----ATGT------CCTGTCCTGTTT---T----GTTGTTT---------------------------TTGTCGGCC---GAG-GAG--TGTCGGTGTCGGCCGATCAGT--TGTGTTTGAAAAGTATTCTGCTC----CGAGCAGGTC-TTCATGTTGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................GAG-GAG--TGTCGGTGTCGGCC.........................................................2011.001010000
...............................................................................................................................................................................................................................................................................................................................GGCC---GAG-GAG--TGTCGGTGTCGGC..........................................................2311.001010000
..........................................................................................................................................................GA---CA-------------AATGAAATGTGATAA--GTT--------A---------------G----.......................................................................................................................................................................................2411.001100000
.........................................................................................................................................................................................................................................................................................................................................................................GTTTGAAAAGTATTCTGCTC----.....................2011.001010000
.......................................................................................................................................................................................................................................................................GTCCTGTTT---T----GTTGTTT---------------------------TTGTCGGC....................................................................................2511.001000010
........................................................................................................................................................................................................................................................................................GTTGTTT---------------------------TTGTCGGCC---GAG-GAG--TGT....................................................................2511.001010000
.............................................................................................................................................................................................................................................................................................................................................................GATCAGT--TGTGTTTGAAA.....................................1811.001000001
..............................................................................................................................................................................AATGAAATGTGATAA--GTT--------A---------------G----G----A.................................................................................................................................................................................2211.001010000
.................G-----ACCAAGACCGAGGTGGTCCTCG---CCT...................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..........................................................................................................................................................................................................................................TTAGGAAGAAGG----ATGT------CCTGTCCTGTT.......................................................................................................................................2711.001000010
...........................................................................................T------------GAAGGTCC-------------------------------TGT--GCTGAAGA---CA-------------........................................................................................................................................................................................................................................2211.001100000
.....................................................................................GGC-CCT------------GAAGGTCC-------------------------------TGT--GCTGAAGA---CA-------------........................................................................................................................................................................................................................................2711.001100000
..............................................................................................................................................................................................................................................................................................................................................................................AAAAGTATTCTGCTC----CGAGC................2011.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................GCTC----CGAGCAGGTC-TTCATGTT..2211.001000010
.........................................................................................CCT------------GAAGGTCC-------------------------------TGT--GCTGAAGA---CA-------------AAT.....................................................................................................................................................................................................................................2711.001100000
....................................................................................................................................................GCTGAAGA---CA-------------AATGAAATGT..............................................................................................................................................................................................................................2011.001001000
............................................................................................................................................................................................................................................................................GTTT---T----GTTGTTT---------------------------TTGTCGGCC---................................................................................2111.001010000
.........................................................................................CCT------------GAAGGTCC-------------------------------TGT--GCTGAAGA---C......................................................................................................................................................................................................................................................2311.001010000
droBip1
GTCCGGAGGGTCTC---G-----ACCAAGACCGAGGTGGTCCTCG---CCTCGCCCCCCA-----A-ATGGT---CAAATTCCTAGGCCCAG-----------TTCCAGCCCAAGCAAGTCTCCCC-AGCC---CAAGAAGGTTGT--GCAGCTGA---CA-------------AATTAAATGTGATAA--GTT-----------------------------------AG---TTAGGAG-GAGT----A--T----GTCCTG-----TTTG--------TTG-------TT-------GTGTGT----------------------------------------GCCGATCGGT--TATGTTTGAAAAGTATTCTGCTC----CGAGCAGGTC-TTCATGTTGTSizeHit CountTotal NormTotal
No Reads
dp5
AGCCGCCGTGTGTC---G-----ACCAAGAACGAAGTGGCCTTGCTGCCCTCACACGGCAACCTAACTTGGC---TGGATTCCTAGAC-CATGTAAC-CATAACCAGAACCCTG-------CCCTA-GTCCTTCTTAGAAGGTTGTGGGCAGCTGG---AATGAAATGATGATGAATGAATTGTGATAAGAGTTTTCTG---A---------------G----A----GAGCTATTAGGAG----T----G--TCCGTG-----TCCCATGT--TT----GTTGTGT-----------------------AGTAGTGCCGGG--------GG--GCGAAGC---TCTCGGGCCAGTCGTAAGTTTTGAAAGTATTTTGCTCAGCAGCAGCAGGCC-TAAATGTT--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................GGATTCCTAGAC-CATGTAAC-CATAACC.............................................................................................................................................................................................................................................................................................................2712.0020020000000
......................................................................................................................................TTAGAAGGTTGTGGGCAGCTGG---.......................................................................................................................................................................................................................................................2212.0020200000000
...............................................................TAACTTGGC---TGGATTCCTAGAC-CAT..........................................................................................................................................................................................................................................................................................................................2511.0010100000000
..........................................................................................................................................AAGGTTGTGGGCAGCTGG---AA.....................................................................................................................................................................................................................................................2011.0010000010000
....................................................................................................................................TCTTAGAAGGTTGTGGGCAGCTGG---A......................................................................................................................................................................................................................................................2511.0010100000000
.....................................................................................................AACCAGAACCCTG-------CCCTA-GTC....................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................GGTTGTGGGCAGCTGG---AAT....................................................................................................................................................................................................................................................1911.0010100000000
..................................................................................................................................................GGGCAGCTGG---AATGAAATGATGAT.........................................................................................................................................................................................................................................2411.0010100000000
...................................................................................................................................................GGCAGCTGG---AATGAAATGATGAT.........................................................................................................................................................................................................................................2311.0010000001000
..............................................................................................AAC-CATAACCAGAACCCTG-------CCCTA-GTC....................................................................................................................................................................................................................................................................................2711.0010010000000
.................................................................................................................................................................................................TTTCTG---A---------------G----A----GAGCTATTAGGA......................................................................................................................................................................2111.0010000000001
.............................................................................................................................................................................................................................................................TCCGTG-----TCCCATGT--TT----GTTG..........................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................GT-----------------------AGTAGTGCCGGG--------GG--GCGA....................................................................2011.0010100000000
..................................AGTGGCCTTGCTGCCCTCACACGG............................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
................................................................................................................................................................................................................................................................................................................................GG--------GG--GCGAAGC---TCTCGGGCC.....................................................2011.0010100000000
..................................................................................................................................CTTCTTAGAAGGTTGTGGGCAGCTGG---A......................................................................................................................................................................................................................................................2711.0010100000000
.....CCGTGTGTC---G-----ACCAAGAACG.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................G----T----G--TCCGTG-----TCCCATGT--TT----GTTGTGT-----------------------................................................................................................2611.0010100000000
...........................................................................................................................................................................................................................................................................................GTGT-----------------------AGTAGTGCCGGG--------GG--GC......................................................................2011.0010100000000
....................................................................................................................................................GCAGCTGG---AATGAAATGATG...........................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................GTGT-----------------------AGTAGTGCCGGG--------GG--GCGA....................................................................2211.0010100000000
.GCCGCCGTGTGTC---G-----ACCAAG.........................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......................................................................................................................................................AGCTGG---AATGAAATGATGATG........................................................................................................................................................................................................................................2111.0010100000000
droPer2
AGCCGCCGTGTGTC---G-----ACCAAGAACGAAGTGGCCTTGCTGCCCTCACACGGCAACCTAACGTGGC---TGGATTCCTAGAC-CATGTAAC-CATAACCAGAACCCTG-------CCCTA-GTCCTTCTTAGAAGGTTGTGGGCAGCTGG---AATGAAATGATGATGAATGAATTGTGATAAGAGTTTTCTG---A---------------G----A----GAGCTATTAGGAG----T----G--TCCGTG-----TCCCATGT--TT----GTTGTGT-----------------------AGTAGTGCCGGG--------GG--GCGAAGC---TCTCGGGCCAGTCGTAAGTTTTGAAAGTATTTTGCTCAGCAGCAGCAGGCC-TAAATGTT--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................CAACCTAACGTGGC---TGGAT......................................................................................................................................................................................................................................................................................................................................1911.001010000
.GCCGCCGTGTGTC---G-----ACCAA..........................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
....................................................................................................................................................................................................................................................................................................................................................C---TCTCGGGCCAGTCGTAAGTTTT........................................2311.001100000
..................................................................................................................................................................GAAATGATGATGAATGAATTGT..............................................................................................................................................................................................................................2211.001000001
.....................................................................................................................................CTTAGAAGGTTGTGGGCAGCTGG---AAT....................................................................................................................................................................................................................................................2611.001000001
............................................................................................................................................GGTTGTGGGCAGCTGG---AATGAAAT...............................................................................................................................................................................................................................................2411.001000001
....................................................................................AGAC-CATGTAAC-CATAACCAGAACCCT.....................................................................................................................................................................................................................................................................................................2711.001100000
....................................................................................................................................................................................................................................................................................................................................................C---TCTCGGGCCAGTCGTAAGTTT.........................................2211.001100000
...............................................................................................................................................................................ATGAATTGTGATAAGAGTTTTC.................................................................................................................................................................................................................2211.001100000
............................................................................................GTAAC-CATAACCAGAACCCT.....................................................................................................................................................................................................................................................................................................2011.001100000
............................................................................................GTAAC-CATAACCAGAACCCTG-------CCCTA-GTC....................................................................................................................................................................................................................................................................................2911.001100000
................................................................................................................................................GTGGGCAGCTGG---AATGAAAT...............................................................................................................................................................................................................................................2011.001000001
AGCCGCCGTGTGTC---G-----ACCAA..........................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
................................................................................................................................................GTGGGCAGCTGG---AATGAAATGATGATG........................................................................................................................................................................................................................................2711.001000001
.............................................................................................................................................GTTGTGGGCAGCTGG---AATGAA.................................................................................................................................................................................................................................................2111.001010000
..................................................................................................................................................GGGCAGCTGG---AATGAAAT...............................................................................................................................................................................................................................................1811.001000001
..CCGCCGTGTGTC---G-----ACCAA..........................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.........................................................GCAACCTAACGTGGC---TGGATTCCT..................................................................................................................................................................................................................................................................................................................................2411.001010000
............................................................................................................................................................................TGAATGAATTGTGATAAGAG......................................................................................................................................................................................................................2011.001000010
..................................................................................................................................................................GAAATGATGATGAATGAATTGTGAT...........................................................................................................................................................................................................................2511.001000001
AGCCGCCGTGTGTC---G-----ACC............................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droWil2
-----CCGCGTGTC---T-----GCCAAAAACGAAGTGCTATTGG---TCAATAGGGATA-ATTGGCTTGAC---CACGTTCCTATATGTAG----AGACTAAGCGGGGTACTC-------GC---------------ATGGTTGT--TC---TAACAAT-----CTGCTCGAGCCTGAATTGTGATAA--GATTTTTGATAA---------------GAGAAGAAGAGAG---AAAGATT----AGCTTT--T------TGTC-----TGTT---------------TGTAT-------ATTTAAAGTAAGT-GTTTTACACCGCGTGCCAAGACCAAGT---CTTT-------T--GAATTATGGAAAGTATTCTAC-----------ATGTT-TTTTAGTC--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................AG----AGACTAAGCGGGGTACTC-------GC---------------ATGGT.......................................................................................................................................................................................................................................................................2712.00200110
................................................................GGCTTGAC---CACGTTCCTATATGTAG----A.....................................................................................................................................................................................................................................................................................................................2611.00101000
...............................................................................................................................................TGT--TC---TAACAAT-----CTGCTCGAGC.......................................................................................................................................................................................................................................2211.00100010
.............................................................................................................................................................................................................................................................................................................................................GACCAAGT---CTTT-------T--GAATTATGGAAA....................................2511.00101000
...........................................................................................................................................................ACAAT-----CTGCTCGAGCCTGAA..................................................................................................................................................................................................................................2011.00110000
.............................................................................................................................................................................GCCTGAATTGTGATAA--GATTTTTG...............................................................................................................................................................................................................2411.00100010
.....................................GCTATTGG---TCAATAGGGAT...........................................................................................................................................................................................................................................................................................................................................................1911.00100100
..............................................................................................................................................................................................................................................ATT----AGCTTT--T------TGTC-----TGTT---------------TGTAT-------ATTTA.....................................................................................................2811.00101000
.........................CAAAAACGAAGTGCTATTGG---TCAATAGG..............................................................................................................................................................................................................................................................................................................................................................2811.00100100
..........................................................................................................................................................................................................................................................................................................................GTTTTACACCGCGTGCCAAGACCAA...................................................................2511.00100100
................................................................................................................................................GT--TC---TAACAAT-----CTGCTCGAGCCT.....................................................................................................................................................................................................................................2311.00100010
...........................................................................................................................................................................................AA--GATTTTTGATAA---------------GAGAAGAAGAGAG---A...........................................................................................................................................................................2811.00100100
.....................................................................................................................................................................................................TGATAA---------------GAGAAGAAGAGAG---AAA.........................................................................................................................................................................2211.00100100
.....................................................................................................................................................................CTGCTCGAGCCTGAATTGTG.............................................................................................................................................................................................................................2011.00101000
..........................................................................................AG----AGACTAAGCGGGGTACTC-------GC---------------ATGGTT......................................................................................................................................................................................................................................................................2811.00100100
..................................................................................................................................................................................................................................................................................................................................................AGT---CTTT-------T--GAATTATGGA......................................1811.00100010
.....................................................................GAC---CACGTTCCTATATGTAG----AGACT.................................................................................................................................................................................................................................................................................................................2511.00100010
.................................................................................................GACTAAGCGGGGTACTC-------GC---------------ATGGT.......................................................................................................................................................................................................................................................................2411.00101000
................................................................................................................................................GT--TC---TAACAAT-----CTGCTCGAGCCTGAA..................................................................................................................................................................................................................................2611.00100010
......................................................................................................................................................................................................GATAA---------------GAGAAGAAGAGAG---AAAGATT----.................................................................................................................................................................2511.00100100
............................................................................................................................................................................................................................................................................................................................TTTACACCGCGTGCCAAGAC......................................................................2011.00110000
..........................................................................................................................................................................................................................................................................................................................GTTTTACACCGCGTGCCAA.........................................................................1911.00101000
........................................................................................................................................................................................GATAA--GATTTTTGATAA---------------GAGAAGAA....................................................................................................................................................................................2511.00100100
..................................................................................................................................................................................................TTTTGATAA---------------GAGAAGAAGAGAG---AAAGA.......................................................................................................................................................................2711.00100100
.....................................................................................................................................................................................TGTGATAA--GATTTTTGATAA---------------GA..........................................................................................................................................................................................2211.00100010
......................................................................................................................................................................................................GATAA---------------GAGAAGAAGAGAG---A...........................................................................................................................................................................1911.00100010
.............................................................................................................................................................................................................................................GATT----AGCTTT--T------TGTC-----TGTT---------------TGTAT-------ATTT......................................................................................................2811.00101000
...............................................................................................................................................................................................GATTTTTGATAA---------------GAGAAGAAGAGAG---AAA.........................................................................................................................................................................2811.00100100
....................................................................................................................................................................................TTGTGATAA--GATTTTTGATAA---------------GAG.........................................................................................................................................................................................2411.00100100
.......................................................................C---CACGTTCCTATATGTAG----A.....................................................................................................................................................................................................................................................................................................................1911.00100010
...............................................................................................................................................TGT--TC---TAACAAT-----CTGCTCGAGCCTGAATT................................................................................................................................................................................................................................2911.00100100
...........................................................................................................................................................................................AA--GATTTTTGATAA---------------GAGAAGAAGAGA................................................................................................................................................................................2611.00100100
.................................................................................................................................................................................................TTTTTGATAA---------------GAGAAGAAGAGAG---AAAG........................................................................................................................................................................2711.00100100
.....................................................AGGGATA-ATTGGCTTGTT---...........................................................................................................................................................................................................................................................................................................................................18200.05100010
droMoj3
GACAGACATGGTG-----------CCAAAAATGAGATATTACTAG---AATCGCCAACAA-----A-ATGGC---TAAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
GACAGACATGGTG-----------CCAAAAAT......................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
GACAGACATGGTG-----------CCAAAAATGAGAT.................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
droGri2
GCCTCATAATGACTCACCATGGGGCCAAAAATGAAATAATATTAT---CCTCACCACCCA-----A-ATGGC---TAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................ATATTAT---CCTCACCACCCA-----A-ATG................................................................................................................................................................................................................................................................................................................................................2311.00110

Generated: 05/17/2015 at 10:16 PM