ID:

dya_332

 Coordinate:

2L:16207925-16208075 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.6 -18.4 -18.2 -18.2

Flybase annnotation

CDS [Dyak\GE19136-cds]; exon [dyak_GLEANR_2911:10]; intron [Dyak\GE19136-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCGCTACGTCCAGCGCACTTGAGGATGTGGAGGACATCGTGATCAACGAGGTAAATCAAGAACCAGAACAACATCCACCGCATGGCCGCATTTCAAGTAGCGCTCAGAGCACCGCTGCCGACCTCTCTCATTGGACCCTATCCACGCCAGTGCGCCGCAGTAGTTCACTAAAGTTCATTAACAGTCGCCCCTTCCACTCCCCCTCCCATTCAATGGGGTACGAAAGATCGGTGCCCCTCGCAAGACCTTCG
***************************************************************************.((....(((.((((((((((((((((((...)))...)))))............)))))..............))))))))..)).***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V120
male body		 M056
embryo
 M026
head
 V046
embryo
 V052
head
 GSM1528802
follicle cells
..........CAGCGCACTTGAGGATGTGGA............................................................................................................................................................................................................................ 21 0 1 6.00 6 1 3 2 0 0 0 0
.........................TGTGGAGGACATCGTGATCAACGAGGCTC..................................................................................................................................................................................................... 29 3 1 2.00 2 0 0 0 2 0 0 0
...........................................CAACGAGGTAAATCAAGAACCAGAACAAC................................................................................................................................................................................... 29 0 1 2.00 2 0 0 0 2 0 0 0
.........................................................................................................................................................................................................................GTACGAAAGATCGGTGCCCCTCGCAA........ 26 0 1 2.00 2 0 2 0 0 0 0 0
...............................GGACATCGTGATCAACGAGGTA...................................................................................................................................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0 0
...............................GGACATCGTGATCAACGAGGCTCA.................................................................................................................................................................................................... 24 3 1 2.00 2 2 0 0 0 0 0 0
........TCCAGCGCACTTGAGGATGTGG............................................................................................................................................................................................................................. 22 0 1 2.00 2 1 1 0 0 0 0 0
...................TGAGGATGTGGAGGACATCGT................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 1 1 0
.......GTCCAGCGCACTTGAGGATGTGGA............................................................................................................................................................................................................................ 24 0 1 2.00 2 1 1 0 0 0 0 0
...........................................................................CACCGCATGGCCGCATTTCAA........................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................CCACGCCAGTGCGCCGCAGTA......................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................AGTAGCGCTCAGAGCACCGC........................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................CCGCTCAGAGCACCGCTGCCGAC................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................ATTTCAAGTAGCGCTCAGA............................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
......................................GTGATCAACGAGGTAAATCA................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................AGAGCACCGCTGCCGACCTCTCTCATTG...................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................ATTTCAAGTAGCGCTCAGAGCACCGCT....................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................GCTGCCGAGCTCTCTCATTGGA.................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
..............GCACTTGAGGATGTGGAGGTC........................................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0
.........................................ATCAACGAGGTAAATCAA................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0
....TACGTCCAGCGCACTTGAGGATG................................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
..............GCACTTGAGGATGTGGAGGACATCGT................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
............GCGCACTTGAGGATGTGGAGGACATCGC................................................................................................................................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0
.......GTCCAGCGCACTTGAGGA.................................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0
..........CAGCGCACTTGAGGATGTGGAGGACATC..................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................AACATCCACCGCATGGCCGCATTTCAA........................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................CTCCCCCTCCCATTCAATGGGGTA............................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................GACCCTATCCACGCCAGTGCGCCGCAGT.......................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0
.CGCTACGTCCAGCGCACTT....................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................CGAAAGATCGGTGCCCCTCGCAA........ 23 0 1 1.00 1 0 1 0 0 0 0 0
.................CTTGAGGATGTGGAGGACAT...................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
..........................GTGGAGGACATCGTGATCAACGAGG........................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0
.........CCAGCGCACTTGAGGATGTGGA............................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0
......CGTCCAGCGCACTTGAGGA.................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................GCACTGTTGCCGACCTATCTC.......................................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0 0
..................................................GTAAATCAAGAACCAGAAC...................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
......CGTCCAGCGCACTTGAGGATGTGGA............................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................CATTAACAGTCGCCCCTTC......................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
................ACTTGAGGATGTGGAGGACATCGT................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0
....................GAGGATGTGGAGGACATCGT................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
....................................................AAATCAAGAACCAGAACAACATCCAC............................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................TCATTGGACCCTATCCACGCCAGT.................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................GTAGCGCTCAGAGCACCGCT....................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................CAATGGGGTACGAAAGATCGGT................... 22 0 1 1.00 1 0 1 0 0 0 0 0
........................ATGTGGAGGACATCGTGATCAACGAGGCT...................................................................................................................................................................................................... 29 2 1 1.00 1 0 1 0 0 0 0 0
...............................GGACATCGTGATCAACGAGGCT...................................................................................................................................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................GCTCAGAGCAACGCTGGC.................................................................................................................................... 18 2 5 0.20 1 1 0 0 0 0 0 0
................................................................ATAACAACATGGACCGCATG....................................................................................................................................................................... 20 3 11 0.09 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................CAATGGGGCCCGAAAGA........................ 17 2 18 0.06 1 0 0 0 0 0 0 1
...........................................................................................................ATCACCGGTGTCGACCTC.............................................................................................................................. 18 3 20 0.05 1 0 0 0 1 0 0 0

Anti-sense strand reads

GGCGATGCAGGTCGCGTGAACTCCTACACCTCCTGTAGCACTAGTTGCTCCATTTAGTTCTTGGTCTTGTTGTAGGTGGCGTACCGGCGTAAAGTTCATCGCGAGTCTCGTGGCGACGGCTGGAGAGAGTAACCTGGGATAGGTGCGGTCACGCGGCGTCATCAAGTGATTTCAAGTAATTGTCAGCGGGGAAGGTGAGGGGGAGGGTAAGTTACCCCATGCTTTCTAGCCACGGGGAGCGTTCTGGAAGC
*****************************************************************************************.((....(((.((((((((((((((((((...)))...)))))............)))))..............))))))))..)).*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V058
head
 V052
head
 V046
embryo
 GSM1528802
follicle cells		 M043
female body
..........................................................................................................................................................................................CGGGGATAGTGAGGGGGCGGGT........................................... 22 3 3 1.00 3 3 0 0 0 0
..........................................................................................................................................................................................CGGGGATAGTGAGGGGGAGGGT........................................... 22 2 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................TGTAGCCAGGGGGACCGTTC....... 20 3 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................CGGGGATGGTCAGGGGGCGGGT........................................... 22 3 4 0.75 3 3 0 0 0 0
..........................................................................................................................................................................................CGGGGATAGTGAGGGGGAAGGT........................................... 22 3 4 0.50 2 2 0 0 0 0
..........................................................................................................................................................................................CGGGAAAGGTGAGGAGGAAGGT........................................... 22 3 2 0.50 1 0 0 1 0 0
..........................................................................................................................................................................................CGGGGAAAGTGAGGGGGATGGT........................................... 22 2 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................CGGGGATGGTCAGGGGGGGGGT........................................... 22 3 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................CGTGTAAGGTCAGGGGGAGGGT........................................... 22 3 2 0.50 1 1 0 0 0 0
...................................................................TGTAGTAGGTGGCGAAC....................................................................................................................................................................... 17 2 15 0.40 6 0 0 0 6 0
..........................................................................................................................................................................................CGGGGAAAGTGACGTGGAGGGT........................................... 22 3 3 0.33 1 1 0 0 0 0
..........................................................................................................................................................................................CGCGGAAGGTCAGGGGGCGGGT........................................... 22 3 4 0.25 1 1 0 0 0 0
..........................................................................................................................................................................................CGGGGATAGTGAGGGGGTGGGT........................................... 22 3 4 0.25 1 1 0 0 0 0
..........................................................................................................................................................................................CGGGGACGGTCAGGGGGAAGGT........................................... 22 3 5 0.20 1 1 0 0 0 0
.........................................................................................................................................................................................GCAGGGAAGGTGAGGGTGAGTG............................................ 22 3 5 0.20 1 0 0 0 0 1
..........................................................................................................................................................................................CGGGGAGGGTGAGGGGGCGGGT........................................... 22 2 6 0.17 1 1 0 0 0 0
..........................................................................................................................................................................................CGGGGATGATGAGGGGGAAGGT........................................... 22 3 6 0.17 1 1 0 0 0 0
..........................................................................................................................................................................................CGGGGATGGTCAGGGGGAAGGT........................................... 22 3 7 0.14 1 1 0 0 0 0
...........................................................................................................................................................................................GGGAAAGGTCAGGGGGAGGG............................................ 20 2 8 0.13 1 1 0 0 0 0
..........................................................................................................................................................................................CGGGGAGCGTTAGGGGGAGGGT........................................... 22 3 9 0.11 1 0 0 1 0 0
...........................................................................................................................................................................................GCGGAAGGTCAGGGGGGGGGT........................................... 21 3 9 0.11 1 0 1 0 0 0
...........................................................................................................................................................................................GGGGATGGTGAGGGGGATGGT........................................... 21 2 10 0.10 1 1 0 0 0 0
...........................................................................................................................................................................................GGGGAAGGGCAGGGGGAGGGT........................................... 21 2 10 0.10 1 1 0 0 0 0
........................................................................................................................................................................................CGCAGGGAAGGTGAGGGTGA............................................... 20 3 19 0.05 1 0 0 0 0 1
........................................................................................................................................................................................AGTTAGGAAGGTGAGGGGGA............................................... 20 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2L:16207875-16208125 + dya_332 CCGCTAC------------GTCCAGC-----------------------------GCACT------------------T---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACAAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTAGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGCCGCAGTAGTTCACTAAAGTTCATTAACA------------------GTCGCCC---------------CTTCC--ACTC-----CCCC-------------------------------TCC------------C-----------------------------------ATTCAATGGG------GTACGAAAGATCGGTGCCCCTCGCAAGACCTTCG
droEre2 scaffold_4929:19068366-19068616 - CCGCTAC------------GACCAGC-----------------------------GCACC------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAATAAAGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGCCGCAGTAGTTCACTTAAGTTCATTAACA------------------GTCGCCC---------------CTTCC--ACTG-----CCCC-------------------------------TCC------------C-----------------------------------ACTCGTTGGG------CTACGAGAGATCGGTGCCCCTAGAAAGACCTGCG
droSec2 scaffold_1:1193143-1193393 + CCGCCAC------------GACCAGC-----------------------------GCAGC------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTGGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGACGCAGTAGCTCACTAAAGTTCATTAACA------------------GCCGCCC---------------CTTCC--ACTC-----CCCC-------------------------------TCC------------C-----------------------------------CCTCGCTGGG------CTACGAGAGATCGGTGCCCCTCGAGAGACCTTCG
droSim2 2r:4377443-4377693 + dsi_27123 CCGCCAC------------GACCAGC-----------------------------GCAGC------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTGGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGACGCAGTAGCTCACTAAAGTTCATTAACA------------------GCCGCCC---------------CTTCC--ACTC-----CCCC-------------------------------TCC------------C-----------------------------------CCTCGCTGGG------CTACGAGAGATCGGTGCCCCTCGAGAGACCTTCG
dm3 chr2R:3536153-3536403 + CCGCCAC------------AACCAGC-----------------------------GCAGG------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTGGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGACGCAGTAGCTCACTAAAGTTCATTAACA------------------GCCGCCC---------------CTTCC--ACTC-----CCCC-------------------------------TCC------------C-----------------------------------CCTCGCTGGG------CTACGAGAGATCGGTGCCCCTCGAGCGACCTTCG
droEug1 scf7180000409672:5552858-5553102 + CTGCAGC------------CCCCATC-----------------------------TCAGC------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGTACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTAGCGCTCAGAGC---AC------------------------------------------CGCTACCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGCCGTAGCAGTTCGCTAAAGTTCATAAACA------------------GCCGCCC---------------CTCCC--CCT------------------------------------------CC------------C-----------------------------------ACTCCTTGGG------TTACGAAAGGTCAGTGCCCCTCGAACGACCTTCC
droBia1 scf7180000302292:2596841-2597091 - CCGCCGC------------CTCCGTC-----------------------------GCAGC------------------C---GAGGATGTGC---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGATCCAC------------------AT---CCACCGCATGGC------CGCATTTCCAGTAGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGCCGTAGCAGTTCGCTCAAGTTCATTAACA------------------GCCGCCC---------------CTCCC--CAAC-----CCCC-------------------------------TCG------------T-----------------------------------ACTCACTGGG------CTACGAGCGGTCACCGCCCCTCGAACGACCCTCG
droTak1 scf7180000416016:142416-142660 + CTGCCGC------------CTCTCCA-----------------------------TCGAC------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCCAGTAGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCCCTCATTGGACCCTATCCACGCCAGTGCGCCGTAGCAGTTCGCTCAAGTTCATTAACA------------------GCCGCCC---------------CTCCC--CCG------------------------------------------CC------------C-----------------------------------GCTCGCTGGG------CTGCGAAAGGTCACCGCCCCTCGAACGACCTTCG
droEle1 scf7180000491347:392776-393053 + CCCCATC------------CTCCATCTCC-----------GAGCC---GCAGCGTGCTGC------------------T---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTAGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACGCTGTCCACGCCAGTGCGCCGTAGCAGTTCGCTAAAGTTCATTAACA------------------GCCGCCC---------------CTCCC--ACTC-----TTCC-------------------------------TCACCCTCCCACTCCC-----------------------------------TGTCCTTGGG------CTACGAAAGGTCAGTGCCCCTGGAACGACCTTCC
droRho1 scf7180000780108:130534-130799 + CTTCATC------------CTCCATCCCT-----------GATCC---GCAGCGTGCTGC------------------T---GAGGATGCAG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGATCCGC------------------AT---CCACCGCATGGC------AGCATTTCAAGTAGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGCCGTAGCAGTTCGCTAAAGTTTATTAACA------------------CTCGACC---------------CTCCC--CTTC-----CCCC-------------------------------TCT------------C-----------------------------------TGTCCATGGG------CTACGAGAGGTCGCTGCCCCGGGAACGACCTTCC
droFic1 scf7180000453948:296971-297230 + CCCCCAC------------CTCC-----------------GAGAT---GCAGCGTTCATC------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTAGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACTTTGTCGACGCCAGTGCGCCGGAGCAGTTCGCTCAAGTTCATTAACA------------------GCCGCCC---------------CTCCC--CGTC-----CCCC-------------------------------TCC------------C-----------------------------------TCTCCTTGGG------CTACGAGCGGGCGGTGCCCCTCGAACGACCTTCG
droKik1 scf7180000302476:3359369-3359658 + CCACTGC------------CGCCAGCTCCTTTGTGGATCAGCGGCGAAG-----CGCTGG------------------T---GAGGACGTCG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------TT---CCACCGCATGGC------CGCATTTCAAGTAGCGCTCAGAGT---AA------------------------------------------CGTTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGCCGTAGCAGCTCGCTTAAGTTCATTAACA------------------GCCGCCC---------------CTCTC--CCCG-----TACC-------------------------------TCTGCCTCCACCGCCCC---GC-----------------------------ACTCATTGGC------TTACGAAAGGTCAGCGACCCTTGAACGCCCCTCC
droAna3 scaffold_13266:10044810-10045120 + CTAATGCCACTGCAAGTGCATCCATC-----------------------------AATTC------------------T---GAGGATGCTG---AGGACATTGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------TTCCACCAACGCATGGCCAA---CGCATTTCAAGTAGCGCTCAGAGT---AA------------------------------------------CGTTGCCGACC---TCTCTCATTGGACACTATCCACGCCAGTGCGCCGTAGCAGTTCGCTTAAGTTCATTAACA------------------GCCGCCC---------------CGCCC--ACTC-----CCACACCCACTCCCACTCGCCGTCCCTATCCCCCA-------------CCCC---GTACGCCAGCG--------------------CCTCATTAGC------CTACGATCGGTCAGCTCACCTCGAACGTCCTTCC
droBip1 scf7180000396759:1762139-1762437 + CCAGTGC------------TTCCATC-----------------------------TCCGC------------------A---GAGGATGCTG---AGGACATTGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------TTCCACCAACGCATGGCCAA---CGCATTTCAAGTAGCGCTCAGAGT---AA------------------------------------------CGTTGCCGACC---TCTCTCATTGGACACTATCCACGCCAGTGCGCCGTAGCAGTTCGCTTAAGTTCATTAACA------------------GCCGCCC---------------TGCCC--ACTC-----CCTCACCCACTCCCACTCGCCCTCCCTGTCCCCCA-------------CCCC---GTACGCCAGTG--------------------CCTCATTAGC------CTACGATAGGGCAGCGCCTCTCGAACGTCCTTCC
dp5 3:12219580-12219833 - GAGCATC------------GTCCGGCGCA-----------GAGAA---GCAGCCGTCCGC------------------A---GAGGATGTTGAGCAGGACATAGTTATCACCGAGGTAAATCA------------ACCAGAACCAC------------------TA---CCACCGCATGGC------CGCATTTTAAGTAGCGCTCAAAGT---AA------------------------------------------CGCGCCTGACC---TCTCTCATTGGTCACTGTCCACACCAGTGCGCCGTAGCAGTTCGCTAAAATTCATTAACA------------------AGCGTCC---------------ATCCC--CCTC------------------------------------------A------------T---------------TAA-------CGCCCGCCCCCATCAATG-A------CTAC------------------GAGCGTCCTTCC
droPer2 scaffold_44:403065-403318 - GAGCATC------------GTCCGGCGCA-----------GAGAA---GCAGCCGTCCGC------------------A---GAGGATGTTGAGCAGGACATAGTTATCACCGAGGTAAATCA------------ACCAGAACCAC------------------TA---CCACCGCATGGC------CGCATTTTAAATAGCGCTCAAAGT---AA------------------------------------------CGCGCCTGACC---TCTCTCATTGGACACTGTCCACACCAGTGCGCCGTAGCAGTTCGCTAAAATTCATTAACA------------------AGCGTCC---------------ATCCC--CCTC------------------------------------------A------------T---------------TAA-------CGCCCGTCCCCATCAATG-A------CTAC------------------GAGCGTCCTTCC
droWil2 scf2_1100000004382:162138-162457 - TCGATGT------------GGCAAGA-----------------------------TCTGG------------------A---CCGGAAGATG---TGGATATTGTCATCAATGAGGTAAATGCACCCAATGCACAACCACCAATTC------------------AA---CCACCGCATGGC------CGCAATTCAGTTAGCGCTCAAAGT---ACTCGTAATGTTGATGCTGCTGCTGCTGCTGCAACTGTCTCCGGTGCTGCTGACC---TCTCTCATTGGACTTTATCCACGCCAGTGCGACGCAGCAGTTCGCTTAAATTCATTAATACCAACAACAACAATAACAAACGTAC---------------TTCTC--CCCCCACAACCATATCAAATTT----------CAATGCCCACCA-------------CCACGTTGTA------------------------------------------------------------------CGTCGTCCTTCC
droVir3 scaffold_12875:14594107-14594351 + CGGCTTC------AGTGGCGTGCAGC-----------------------------AGCACGGAGGAGCCAGCGTCGG-CGCAGA--CGGATG---AGGACATTGTCATCAATGAGGTAATTCA------------------------------------------------ACCGCATGGCAAC---CGCATTTCAAGTAGTGCTCAAAGT---AA------------------------------------------CCACGCTGACCTCCTCACACATTGGACGCTGTCGACGCCCGTGCGACGCAGCAGCTCGCTAAAGTTCATTAACA------------------AACGTAC---------------TTGCC--CCAC------------------------------------------A------------T-----------------------------------TAACATTGGCCGGCGGCTAC------------------GAGCGTCCCTCG
droMoj3 scaffold_6496:10073272-10073506 + CAGCAGC------------AACAGGA-----------------------------GCACG-G---AGC----------C---AA--CGGATG---AGGACATTGTCATCAATGAGGTAAAT------------------------------------------------CCAACGCATGGCAACCATGGCATTTCAAGTAGCGCTCAAAGCTCAAA------------------------------------------CCTCGCTGACC---TCTCACATTGGACGCTGTCGAAGCCAGTGCGTCGCAGCAGCTCGCTAAAGTTCATTAACA------------------AACCTAC---------------TTGCCCCACTC-----CCCC-----------------A-------------TTT------------C-----------------------------------TGACATTAGGCAACGGTTA------------------CGAACGCCCCTCG
droGri2 scaffold_15245:14601589-14601865 + CAGCAGC------------TTGGAG------------------------------------------CCAACAAGCGTT-CACA--CCGATG---AGGATATTGTGATCAATGAGGTAAATCA---------ACAACTTGAACAACAAGAACAACAACAACAAGTTCAACAACCGCATGGC------CGCATTTCAAGTACT------AGT---AA------------------------------------------TGTTGCTGACC---TCTCACATTGGACGCTGTCGAAGCCTGTGCGACGCAGCAGCTCGCTAAAATTCATTAACC------------------AACGTACAAGTACAAGTAGTATATCCC--CCA-----------------------------------------TCC------------C----AT---------TAGGACCCATCGC-------CCATGC----------T---------------CATGCAGAGCGTCCCTCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CCGCTAC------------GTCCAGC-----------------------------GCACT------------------T---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACAAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTAGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGCCGCAGTAGTTCACTAAAGTTCATTAACA------------------GTCGCCC---------------CTTCC--ACTC-----CCCC-------------------------------TCC------------C-----------------------------------ATTCAATGGG------GTACGAAAGATCGGTGCCCCTCGCAAGACCTTCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................CAGC-----------------------------GCACT------------------T---GAGGATGTGG---A............................................................................................................................................................................................................................................................................................................................................................................................................................................2116.00601200030000
.......................................................................................TGTGG---AGGACATCGTGATCAACGAGGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................2912.00220000000000
............................................................................................................CAACGAGGTAAATCA---------AGAACCAGAACAAC------------------........................................................................................................................................................................................................................................................................................................................................................................2912.00220000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGAAAGATCGGTGCCCCTCGCAA........2612.00200000020000
................................................................................................GGACATCGTGATCAACGAGGTA......................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200000020000
....................TCCAGC-----------------------------GCACT------------------T---GAGGATGTGG---.............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00201000010000
..............................................................................T---GAGGATGTGG---AGGACATCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200011000000
...................GTCCAGC-----------------------------GCACT------------------T---GAGGATGTGG---A............................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00201000010000
..........................................................................................................................................................................CACCGCATGGC------CGCATTTCAA.......................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..................................................................................................................................................................................................................................................................................................CCACGCCAGTGCGCCGCAGTA.....................................................................................................................................................................................................................2111.00101000000000
....................................................................................................................................................................................................AGTAGCGCTCAGAGC---AC------------------------------------------CGC.......................................................................................................................................................................................................................................................................2011.00110000000000
..............................................................................................................................................................................................ATTTCAAGTAGCGCTCAGA...........................................................................................................................................................................................................................................................................................................................1911.00101000000000
.......................................................................................................GTGATCAACGAGGTAAATCA---------........................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................AGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTG..................................................................................................................................................................................................................................................2811.00101000000000
..............................................................................................................................................................................................ATTTCAAGTAGCGCTCAGAGC---AC------------------------------------------CGCT......................................................................................................................................................................................................................................................................2711.00101000000000
..........................................................................................................ATCAACGAGGTAAATCA---------A.......................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
....TAC------------GTCCAGC-----------------------------GCACT------------------T---GAGGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.......................................................GCACT------------------T---GAGGATGTGG---AGGACATCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
........................GC-----------------------------GCACT------------------T---GAGGATGTGG---AGGACATCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
...................GTCCAGC-----------------------------GCACT------------------T---GAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
......................CAGC-----------------------------GCACT------------------T---GAGGATGTGG---AGGACATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...............................................................................................................................................AAC------------------AT---CCACCGCATGGC------CGCATTTCAA.......................................................................................................................................................................................................................................................................................................................................2711.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................CTC-----CCCC-------------------------------TCC------------C-----------------------------------ATTCAATGGG------GTA...............................2411.00101000000000
..........................................................................................................................................................................................................................................................................................GACCCTATCCACGCCAGTGCGCCGCAGT......................................................................................................................................................................................................................2811.00100000010000
.CGCTAC------------GTCCAGC-----------------------------GCACT------------------T---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGATCGGTGCCCCTCGCAA........2311.00100000010000
..........................................................CT------------------T---GAGGATGTGG---AGGACAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
........................................................................................GTGG---AGGACATCGTGATCAACGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.....................CCAGC-----------------------------GCACT------------------T---GAGGATGTGG---A............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
......C------------GTCCAGC-----------------------------GCACT------------------T---GAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...................................................................................................................GTAAATCA---------AGAACCAGAAC.............................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
......C------------GTCCAGC-----------------------------GCACT------------------T---GAGGATGTGG---A............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
....................................................................................................................................................................................................................................................................................................................................CATTAACA------------------GTCGCCC---------------CTTC....................................................................................................................................................1911.00101000000000
.........................................................ACT------------------T---GAGGATGTGG---AGGACATCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..................................................................................GAGGATGTGG---AGGACATCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.....................................................................................................................AAATCA---------AGAACCAGAACAAC------------------AT---CCAC...............................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
....................................................................................................................................................................................................................................................................................TCATTGGACCCTATCCACGCCAGT................................................................................................................................................................................................................................2411.00101000000000
.....................................................................................................................................................................................................GTAGCGCTCAGAGC---AC------------------------------------------CGCT......................................................................................................................................................................................................................................................................2011.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGGG------GTACGAAAGATCGGT...................2211.00100000010000
......................................................................................ATGTGG---AGGACATCGTGATCAACGAGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
................................................................................................GGACATCGTGATCAACGAGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................2220.50101000000000
droEre2
CCGCTAC------------GACCAGC-----------------------------GCACC------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAATAAAGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGCCGCAGTAGTTCACTTAAGTTCATTAACA------------------GTCGCCC---------------CTTCC--ACTG-----CCCC-------------------------------TCC------------C-----------------------------------ACTCGTTGGG------CTACGAGAGATCGGTGCCCCTAGAAAGACCTGCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................CTG-----CCCC-------------------------------TCC------------C-----------------------------------ACTCGTTGGG------CTACGA............................27114.001400000014
.....................................................................................GATGTGG---AGGACATCGTGATCAACGA..........................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000200
........................................................................................................................................................................................................................................................................................TGGACCCTATCCACGCCAGTGCGC............................................................................................................................................................................................................................2411.0011000000
...........................................................................................G---AGGACATCGTGATCAACGAGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
................................................................................................GGACATCGTGATCAACGAGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................2221.0020000200
..........................................................................................................ATCAACGAGGTAAATCA---------AGAA....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGTTGGG------CTACGAGA..........................1811.0010000010
..........................................................................................................................................................................................................................................................................................................................CACTTAAGTTCATTAACA------------------GTC...........................................................................................................................................................................2111.0010001000
.........................................................................................................................................................................................................................................................................................................................................ACA------------------GTCGCCC---------------CTTCC--ACTG-----CC......................................................................................................................................2111.0010100000
.......................................................................................................................................ACCAGAACCAC------------------AT---CCACCGCATGGC------CG...............................................................................................................................................................................................................................................................................................................................................2711.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGAGATCGGTGCCCCTA............2011.0010001000
.......................................................................................TGTGG---AGGACATCGTGATCAACGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
.......................................................GCACC------------------C---GAGGATGTGG---AGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
...........................................................................................................................................................................................CGCATTTCAAATAAAGCTCAGA...........................................................................................................................................................................................................................................................................................................................2211.0011000000
...................GACCAGC-----------------------------GCACC------------------C---GAGGATGTGG---AGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
....................................................................................................................................................................................................................................................................................................................................CATTAACA------------------GTCGCCC---------------CTTC....................................................................................................................................................1911.0010100000
................................................................................................................................................................................................................................................................................................ATCCACGCCAGTGCGCCGCAGTA.....................................................................................................................................................................................................................2311.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCTAGAAAGACCTGC.1811.0010000010
.................................................................................................GACATCGTGATCAACGAGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................2120.5011000000
................................................................................................GGACATCGTGATCAACGAGGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................2330.3310000010
droSec2
CCGCCAC------------GACCAGC-----------------------------GCAGC------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTGGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGACGCAGTAGCTCACTAAAGTTCATTAACA------------------GCCGCCC---------------CTTCC--ACTC-----CCCC-------------------------------TCC------------C-----------------------------------CCTCGCTGGG------CTACGAGAGATCGGTGCCCCTCGAGAGACCTTCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................GACATCGTGATCAACGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
......................................................................................................CGTGATCAACGAGGTAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
....................................................................................................................................................................................................................................................................................................ACGCCAGTGCGACGCAGTAGCTCA................................................................................................................................................................................................................2411.0010001
........................................................CAGC------------------C---GAGGATGTGG---AGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
........................................................CAGC------------------C---GAGGATGTGG---AGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
............................................................................................................................................................................................GCATTTCAAGTGGCGCTCAGAG..........................................................................................................................................................................................................................................................................................................................2211.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGAGAGATCGGTGCCCCTCGAGAGAC.....2911.0010100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CTACGAGAGATCGGTGCCCCTCGAGA........2711.0010001
..............................................................................................................................................................................................................................................................................................CTATCCACGCCAGTGCGACGCA........................................................................................................................................................................................................................2211.0010010
droSim2
CCGCCAC------------GACCAGC-----------------------------GCAGC------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTGGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGACGCAGTAGCTCACTAAAGTTCATTAACA------------------GCCGCCC---------------CTTCC--ACTC-----CCCC-------------------------------TCC------------C-----------------------------------CCTCGCTGGG------CTACGAGAGATCGGTGCCCCTCGAGAGACCTTCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................CGACC---TCTCTCATTGGACCCT............................................................................................................................................................................................................................................2111.00110000000000000000
........................................................CAGC------------------C---GAGGATGTGG---AGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
.......................AGC-----------------------------GCAGC------------------C---GAGGATGTGG---AGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
.............................................................................................................AACGAGGTAAATCA---------AGAAC...................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000000000
.........................................................AGC------------------C---GAGGATGTGG---AGGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
........................................................................................GTGG---AGGACATCGTGATCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
................................................................................................GGACATCGTGATCAACGAGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.....AC------------GACCAGC-----------------------------GCAGC------------------C---GAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
..................................................................................................................................................................................................................................................................CGCTGCCGACC---TCTCTCATTGG.................................................................................................................................................................................................................................................2211.00100100000000000000
...................................................................................................................GTAAATCA---------AGAACCAGAACCAC------------------AT---...................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...................................................................................................CATCGTGATCAACGAGGCG......................................................................................................................................................................................................................................................................................................................................................................................................................1930.33100100000000000000
dm3
CCGCCAC------------AACCAGC-----------------------------GCAGG------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTGGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGACGCAGTAGCTCACTAAAGTTCATTAACA------------------GCCGCCC---------------CTTCC--ACTC-----CCCC-------------------------------TCC------------C-----------------------------------CCTCGCTGGG------CTACGAGAGATCGGTGCCCCTCGAGCGACCTTCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................GAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCAT....................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007
.....................................................................................................................................................................................................GTGGCGCTCAGAGC---AC------------------------------------------CGCTGCCGAC................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
...................................................................................AGGATGTGG---AGGACATCGTGATC...............................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGATCGGTGCCCCTCGAGCGAC.....2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TGGC------CGCATTTCAAGTGGCGCTCAGAG..........................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACCAGC-----------------------------GCAGG------------------C---GAGGATGTGG---AG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
......................................................................................................CGTGATCAACGAGGTAAATCA---------A.......................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GCAGG------------------C---GAGGATGTGG---AGGACATCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000
...........................................................................................................................................................................................................................................................................................................TGCGACGCAGTAGCTCACTAAAGTT........................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................AGGACATCGTGATCAACGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................CCAGC-----------------------------GCAGG------------------C---GAGGATGTGG---.............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AGC-----------------------------GCAGG------------------C---GAGGATGTGG---AGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................AGGACATCGTGATCAACGAGGTAAATC..................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GATGTGG---AGGACATCGTGATCAACGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGG------CTACGAGAGATCGGTGCCCCTCGAGC........3012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................AGG------------------C---GAGGATGTGG---AGGACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ACCCTATCCACGCCAGTGCGACGC.........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................AGGACATCGTGATCAACGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................GGTAAATCA---------AGAACCAGAACC............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................AGG------------------C---GAGGATGTGG---AGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................G---AGGACATCGTGATCAACGAGGTAAA....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................GGATGTGG---AGGACATCGTGATCAACGA..........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................GGTAAATCA---------AGAACCAGAACCAC------------------A.......................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CTACGAGAGATCGGTGCC................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TCTCTCATTGGACCCTATCCACGCCAG.................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......C------------AACCAGC-----------------------------GCAGG------------------C---GAGGATGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TGCGACGCAGTAGCTCACT..............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGCAGTAGCTCACTAAAG..........................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AGGATGTGG---AGGACATCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CCAGTGCGACGCAGTAGCTCAC...............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGATCGGTGCCCCTCGAG.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................AGC-----------------------------GCAGG------------------C---GAGGATGTGG---AGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CTCTCATTGGACCCTATCCA.......................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GACATCGTGATCAACGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................CAGG------------------C---GAGGATGTGG---AGGACAATC....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GCAGG------------------C---GAGGATGTGG---AG...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................CAGC-----------------------------GCAGG------------------C---GAGGATGTGG---A............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................................................................................................................................................................CAGTGCGACGCAGTAGCTCACT..............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GACC---TCTCTCATTGGACCC.............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GCAGG------------------C---GAGGATGTGG---AGGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................ATGTGG---AGGACATCGTGATCAACGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.......................................................GCAGG------------------C---GAGGATGTGG---AGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CCACGCCAGTGCGACGCAGTAGCTCA................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GCCAGTGCGACGCAGTAGCT..................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................GG------------------C---GAGGATGTGG---AGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGATCGGTGCCCCTCGAGCGA......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................ATCGTGATCAACGAGGTAAATCA---------........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GC-----------------------------GCAGG------------------C---GAGGATGTGG---AGGACATCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTGGG------CTACGAGAGATCGGT...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GTAAATCA---------AGAACCAGAACCAC------------------AT---CCAC...............................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................AGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTC......................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GC-----------------------------GCAGG------------------C---GAGGATGTGG---AGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
........................GC-----------------------------GCAGG------------------C---GAGGATGTGG---A............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................GGTAAATCA---------AGAACCAGAACCAC------------------AT---...................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GGACATCGTGATCAACGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................AGGACATCGTGATCAACGAGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................TCAACGAGGTAAATCA---------AGAACCAGAAC.............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................A---------AGAACCAGAACCAC------------------AT---CCACCGC............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGTGCGACGCAGTAGCTCACTAAAGTTC.......................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CTAAAGTTCATTAACA------------------GCCGC.........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGATCGGTGCCCCTCGAGC........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCTGGG------CTACGAGAGATCGGTG..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTGGG------CTACGAGAGATC......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................................................................................................................................................................................................................................................................................................CC--ACTC-----CCCC-------------------------------TCC------------C-----------------------------------CCTCGCTGGG------CT................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CAGC-----------------------------GCAGG------------------C---GAGGATGTGG---AG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................GAGGATGTGG---AGGACATCGTGATC...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACCAGC-----------------------------GCAGG------------------C---GAGGATGTGG---AA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................C---GAGGATGTGG---AGGACATCGTGATCA..............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GCAGG------------------C---GAGGATGTGG---AGGACATCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCAGC-----------------------------GCAGG------------------C---GAGGATGTGG---G............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGGTGCCCCTCGAGC........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GC---AC------------------------------------------CGCTGCCGACC---TCTCTC......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CAAGTGGCGCTCAGAGC---A.....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CGACGCAGTAGCTCACTAAAGTTC.......................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................G------------------C---GAGGATGTGG---AGGACATCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CCACGCCAGTGCGACGCAGTAG....................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................C-----------------------------GCAGG------------------C---GAGGATGTGG---AGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TATCCACGCCAGTGCGACGCAGTAGC...................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................AGG------------------C---GAGGATGTGG---AGGACATCG....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGGG------CTACGAGAGATCGGTG..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGG------CTACGAGAGATC......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
CTGCAGC------------CCCCATC-----------------------------TCAGC------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGTACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTAGCGCTCAGAGC---AC------------------------------------------CGCTACCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGCCGTAGCAGTTCGCTAAAGTTCATAAACA------------------GCCGCCC---------------CTCCC--CCT------------------------------------------CC------------C-----------------------------------ACTCCTTGGG------TTACGAAAGGTCAGTGCCCCTCGAACGACCTTCCSizeHit CountTotal NormTotal
No Reads
droBia1
CCGCCGC------------CTCCGTC-----------------------------GCAGC------------------C---GAGGATGTGC---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGATCCAC------------------AT---CCACCGCATGGC------CGCATTTCCAGTAGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGCCGTAGCAGTTCGCTCAAGTTCATTAACA------------------GCCGCCC---------------CTCCC--CAAC-----CCCC-------------------------------TCG------------T-----------------------------------ACTCACTGGG------CTACGAGCGGTCACCGCCCCTCGAACGACCCTCGSizeHit CountTotal NormTotal
No Reads
droTak1
CTGCCGC------------CTCTCCA-----------------------------TCGAC------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCCAGTAGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCCCTCATTGGACCCTATCCACGCCAGTGCGCCGTAGCAGTTCGCTCAAGTTCATTAACA------------------GCCGCCC---------------CTCCC--CCG------------------------------------------CC------------C-----------------------------------GCTCGCTGGG------CTGCGAAAGGTCACCGCCCCTCGAACGACCTTCGSizeHit CountTotal NormTotal
No Reads
droEle1
CCCCATC------------CTCCATCTCC-----------GAGCC---GCAGCGTGCTGC------------------T---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTAGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACGCTGTCCACGCCAGTGCGCCGTAGCAGTTCGCTAAAGTTCATTAACA------------------GCCGCCC---------------CTCCC--ACTC-----TTCC-------------------------------TCACCCTCCCACTCCC-----------------------------------TGTCCTTGGG------CTACGAAAGGTCAGTGCCCCTGGAACGACCTTCCSizeHit CountTotal NormTotal
No Reads
droRho1
CTTCATC------------CTCCATCCCT-----------GATCC---GCAGCGTGCTGC------------------T---GAGGATGCAG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGATCCGC------------------AT---CCACCGCATGGC------AGCATTTCAAGTAGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGCCGTAGCAGTTCGCTAAAGTTTATTAACA------------------CTCGACC---------------CTCCC--CTTC-----CCCC-------------------------------TCT------------C-----------------------------------TGTCCATGGG------CTACGAGAGGTCGCTGCCCCGGGAACGACCTTCCSizeHit CountTotal NormTotal
No Reads
droFic1
CCCCCAC------------CTCC-----------------GAGAT---GCAGCGTTCATC------------------C---GAGGATGTGG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------AT---CCACCGCATGGC------CGCATTTCAAGTAGCGCTCAGAGC---AC------------------------------------------CGCTGCCGACC---TCTCTCATTGGACTTTGTCGACGCCAGTGCGCCGGAGCAGTTCGCTCAAGTTCATTAACA------------------GCCGCCC---------------CTCCC--CGTC-----CCCC-------------------------------TCC------------C-----------------------------------TCTCCTTGGG------CTACGAGCGGGCGGTGCCCCTCGAACGACCTTCGSizeHit CountTotal NormTotal
No Reads
droKik1
CCACTGC------------CGCCAGCTCCTTTGTGGATCAGCGGCGAAG-----CGCTGG------------------T---GAGGACGTCG---AGGACATCGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------TT---CCACCGCATGGC------CGCATTTCAAGTAGCGCTCAGAGT---AA------------------------------------------CGTTGCCGACC---TCTCTCATTGGACCCTATCCACGCCAGTGCGCCGTAGCAGCTCGCTTAAGTTCATTAACA------------------GCCGCCC---------------CTCTC--CCCG-----TACC-------------------------------TCTGCCTCCACCGCCCC---GC-----------------------------ACTCATTGGC------TTACGAAAGGTCAGCGACCCTTGAACGCCCCTCCSizeHit CountTotal NormTotal
No Reads
droAna3
CTAATGCCACTGCAAGTGCATCCATC-----------------------------AATTC------------------T---GAGGATGCTG---AGGACATTGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------TTCCACCAACGCATGGCCAA---CGCATTTCAAGTAGCGCTCAGAGT---AA------------------------------------------CGTTGCCGACC---TCTCTCATTGGACACTATCCACGCCAGTGCGCCGTAGCAGTTCGCTTAAGTTCATTAACA------------------GCCGCCC---------------CGCCC--ACTC-----CCACACCCACTCCCACTCGCCGTCCCTATCCCCCA-------------CCCC---GTACGCCAGCG--------------------CCTCATTAGC------CTACGATCGGTCAGCTCACCTCGAACGTCCTTCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................GATGCTG---AGGACATTGTGAT................................................................................................................................................................................................................................................................................................................................................................................................................................2014.004000022
.....................................................................................GATGCTG---AGGACATTGTGATCA..............................................................................................................................................................................................................................................................................................................................................................................................................................2213.003000003
..............................................................................T---GAGGATGCTG---AGGACATTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000011
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------CTACGATCGGTCAGCTCACCTCG...........2611.001000001
................................................................................................GGACATTGTGATCAACGAGGTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.................................................................................................................................................................................................................GT---AA------------------------------------------CGTTGCCGACC---TCTCTCA.....................................................................................................................................................................................................................................................2211.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGCG--------------------CCTCATTAGC------CTACGATC..........................2611.001010000
........................................................ATTC------------------T---GAGGATGCTG---AGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..............................................................................T---GAGGATGCTG---AGGACATTGTGATC...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
..........................................................TC------------------T---GAGGATGCTG---AGGACATTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTAGC------CTACGATCGGTCAGCTCACCT.............2811.001010000
.......................................................AATTC------------------T---GAGGATGCTG---AGGACATTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.....................................................................................GATGCTG---AGGACATTGTGATCAACGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.....................CCATC-----------------------------AATTC------------------T---GAGGATGCTG---AGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..........................................................................................................................................................................................................GCTCAGAGT---AA------------------------------------------CGTTGCC...................................................................................................................................................................................................................................................................1811.001000001
....................................................................................GGATGCTG---AGGACATTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.................................................................................................................................................................................................................................................................................................TCCACGCCAGTGCGCCGTAGCA.....................................................................................................................................................................................................................2211.001000001
........................................................................................................................................................................................................GCGCTCAGAGT---AA------------------------------------------CGTTGCCGACC---TCTCC.......................................................................................................................................................................................................................................................2911.001010000
.........................C-----------------------------AATTC------------------T---GAGGATGCTG---AGGACATTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
...........................................................C------------------T---GAGGATGCTG---AGGACATTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.....................CCATC-----------------------------AATTC------------------T---GAGGATGCTG---AGGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
......................................................................................................................................................................................................................................................................................ATTGGACACTATCCACGCCAGTGCGC............................................................................................................................................................................................................................2611.001010000
droBip1
CCAGTGC------------TTCCATC-----------------------------TCCGC------------------A---GAGGATGCTG---AGGACATTGTGATCAACGAGGTAAATCA---------AGAACCAGAACCAC------------------TTCCACCAACGCATGGCCAA---CGCATTTCAAGTAGCGCTCAGAGT---AA------------------------------------------CGTTGCCGACC---TCTCTCATTGGACACTATCCACGCCAGTGCGCCGTAGCAGTTCGCTTAAGTTCATTAACA------------------GCCGCCC---------------TGCCC--ACTC-----CCTCACCCACTCCCACTCGCCCTCCCTGTCCCCCA-------------CCCC---GTACGCCAGTG--------------------CCTCATTAGC------CTACGATAGGGCAGCGCCTCTCGAACGTCCTTCCSizeHit CountTotal NormTotal
No Reads
dp5
GAGCATC------------GTCCGGCGCA-----------GAGAA---GCAGCCGTCCGC------------------A---GAGGATGTTGAGCAGGACATAGTTATCACCGAGGTAAATCA------------ACCAGAACCAC------------------TA---CCACCGCATGGC------CGCATTTTAAGTAGCGCTCAAAGT---AA------------------------------------------CGCGCCTGACC---TCTCTCATTGGTCACTGTCCACACCAGTGCGCCGTAGCAGTTCGCTAAAATTCATTAACA------------------AGCGTCC---------------ATCCC--CCTC------------------------------------------A------------T---------------TAA-------CGCCCGCCCCCATCAATG-A------CTAC------------------GAGCGTCCTTCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................CCGC------------------A---GAGGATGTTGAGCAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....ATC------------GTCCGGCGCA-----------GAGAA---GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..GCATC------------GTCCGGCGCA-----------GAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................................................GTCCGC------------------A---GAGGATGTTGAGCAGGACAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
........................................................CCGC------------------A---GAGGATGTTGAGCAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................GGACATAGTTATCACCGAGGCG......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...........................................................................................GAGCAGGACATAGTTATCACC............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
GAGCATC------------GTCCGGCGCA-----------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...........................................................................................GAGCAGGACATAGTTATCACCGAGGTA......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
........................................................CCGC------------------A---GAGGATGTTGAGCAGGACATAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
......................................................GTCCGC------------------A---GAGGATGTTGAGCAGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
........................................................................................GTTGAGCAGGACATAGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
........................................................................................................................................................................................................................................................................................................................................AACA------------------AGCGTCC---------------ATCCC--CCTC------------------------------------------...................................................................................................2011.0010100000000
...CATC------------GTCCGGCGCA-----------GAGAA---GCAGCCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
............................................................................................AGCAGGACATAGTTATCACCGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000001000
..........................................................GC------------------A---GAGGATGTTGAGCAGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................ACACCAGTGCGCCGTAGCAG....................................................................................................................................................................................................................2011.0010100000000
droPer2
GAGCATC------------GTCCGGCGCA-----------GAGAA---GCAGCCGTCCGC------------------A---GAGGATGTTGAGCAGGACATAGTTATCACCGAGGTAAATCA------------ACCAGAACCAC------------------TA---CCACCGCATGGC------CGCATTTTAAATAGCGCTCAAAGT---AA------------------------------------------CGCGCCTGACC---TCTCTCATTGGACACTGTCCACACCAGTGCGCCGTAGCAGTTCGCTAAAATTCATTAACA------------------AGCGTCC---------------ATCCC--CCTC------------------------------------------A------------T---------------TAA-------CGCCCGTCCCCATCAATG-A------CTAC------------------GAGCGTCCTTCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................CCGC------------------A---GAGGATGTTGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
..........................................GAA---GCAGCCGTCCGC------------------A---GAGGATGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
..........................................................GC------------------A---GAGGATGTTGAGCAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
GAGCATC------------GTCCGGCGCA-----------GAGAA---GCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.......................................................................................TGTTGAGCAGGACATAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
.................................................................................................................................................................................................................................................................................................................................................................GTCC---------------ATCCC--CCTC------------------------------------------A------------T---------------TAA-------CGCCC.......................................................2311.001100000
........................................................................................GTTGAGCAGGACATAGTTATCACCGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
droWil2
TCGATGT------------GGCAAGA-----------------------------TCTGG------------------A---CCGGAAGATG---TGGATATTGTCATCAATGAGGTAAATGCACCCAATGCACAACCACCAATTC------------------AA---CCACCGCATGGC------CGCAATTCAGTTAGCGCTCAAAGT---ACTCGTAATGTTGATGCTGCTGCTGCTGCTGCAACTGTCTCCGGTGCTGCTGACC---TCTCTCATTGGACTTTATCCACGCCAGTGCGACGCAGCAGTTCGCTTAAATTCATTAATACCAACAACAACAATAACAAACGTAC---------------TTCTC--CCCCCACAACCATATCAAATTT----------CAATGCCCACCA-------------CCACGTTGTA------------------------------------------------------------------CGTCGTCCTTCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................G---TGGATATTGTCATCAATGAGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................2413.00301110
.........................A-----------------------------TCTGG------------------A---CCGGAAGATG---TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200020
........................................................CTGG------------------A---CCGGAAGATG---TGGATATTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200110
....................................................................................................................................................................................................................................................................................TCATTGGACTTTATCCACG.....................................................................................................................................................................................................................................1912.00202000
..................................................................................................................................................................................................................................................................................................................................................ACAACAATAACAAACGTAC---------------TT......................................................................................................................................................2112.00202000
........................GA-----------------------------TCTGG------------------A---CCGGAAGATG---TGGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200200
........................GA-----------------------------TCTGG------------------A---CCGGAAGATG---TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200
........................................................CTGG------------------A---CCGGAAGATG---TGGATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...................GGCAAGA-----------------------------TCTGG------------------A---CCGGAAGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...........................................................G------------------A---CCGGAAGATG---TGGATATTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
............................................................................................................................................CAATTC------------------AA---CCACCGCATGGC------.................................................................................................................................................................................................................................................................................................................................................2011.00101000
.........................A-----------------------------TCTGG------------------A---CCGGAAGATG---T............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
.......................................................TCTGG------------------A---CCGGAAGATG---TGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.......................................................TCTGG------------------A---CCGGAAGATG---TGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
TCGATGT------------GGCAAGA-----------------------------TCTGG------------------A---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
........................................................CTGG------------------A---CCGGAAGATG---TGGATATTGTCAT................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
........................................................CTGG------------------A---CCGGAAGATG---TGGATATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
........................................................CTGG------------------A---CCGGAAGATG---TGGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
......................................................................................................................................................................................................................ACTCGTAATGTTGATGCTGCT.................................................................................................................................................................................................................................................................................................2111.00100100
...................................................................................................................................................................................................................................................................GCTGCTGACC---TCTCTCATTGGA................................................................................................................................................................................................................................................2211.00101000
................................................................................................................................................................................................................AGT---ACTCGTAATGTTGATG......................................................................................................................................................................................................................................................................................................1911.00101000
........................GA-----------------------------TCTGG------------------A---CCGGAAGATG---TGGATATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
......................AAGA-----------------------------TCTGG------------------A---CCGGAAGATG---TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..................................................................................................................................................................................................................................................................................................................................TTCATTAATACCAACAACAACA....................................................................................................................................................................................2211.00101000
......................AAGA-----------------------------TCTGG------------------A---CCGGAAGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.......................................................TCTGG------------------A---CCGGAAGATG---TGGATATTGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
.......................................................TCTGG------------------A---CCGGAAGATG---TGGATATTGTCAT................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
.CGATGT------------GGCAAGA-----------------------------TCTGG------------------A---CCGGAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
................................................................................................GGATATTGTCATCAATGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..GATGT------------GGCAAGA-----------------------------TCTGG------------------A---CCGGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
........................................................................................GATG---TGGATATTGTCATC...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.......................................................TCTGG------------------A---CCGGAAGATG---TGGATATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.....GT------------GGCAAGA-----------------------------TCTGG------------------A---CCGGAAGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.........................A-----------------------------TCTGG------------------A---CCGGAAGATG---TGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
..............................................................................................................................................................................................AATTCAGTTAGCGCTCAAA...........................................................................................................................................................................................................................................................................................................................1911.00100010
.........................A-----------------------------TCTGG------------------A---CCGGAAGATG---TGGATATTGTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
.........................A-----------------------------TCTGG------------------A---CCGGAAGATG---TGGATATTGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
....................................................................................................ATTGTCATCAATGAGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................18130.15210010
droVir3
CGGCTTC------AGTGGCGTGCAGC-----------------------------AGCACGGAGGAGCCAGCGTCGG-CGCAGA--CGGATG---AGGACATTGTCATCAATGAGGTAATTCA------------------------------------------------ACCGCATGGCAAC---CGCATTTCAAGTAGTGCTCAAAGT---AA------------------------------------------CCACGCTGACCTCCTCACACATTGGACGCTGTCGACGCCCGTGCGACGCAGCAGCTCGCTAAAGTTCATTAACA------------------AACGTAC---------------TTGCC--CCAC------------------------------------------A------------T-----------------------------------TAACATTGGCCGGCGGCTAC------------------GAGCGTCCCTCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------------TAACATTGGCCGGCGGCTAC------------------GAGC........2511.001000100000000000000000000000000000000000000000000000000000000000
.....................GCAGC-----------------------------AGCACGGAGGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
......................CAGC-----------------------------AGCACGGAGGAGCCAGCGTCGG-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.................................................................AGCCAGCGTCGG-CGCAGA--CGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................AA------------------------------------------CCACGCTGACCTCCTCACA.......................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................C---CGCATTTCAAGTAGT..................................................................................................................................................................................................................................................................................................................................1611.001000000000000000000000000000000000000000000000000000000000010000
................................................................................................GGACATTGTCATCAATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCCGGCGGCTAC------------------GAGCGTCCCT..2611.001000000000000000000000000000000000000000000000000000000000000001
................................................................................................GGACATTGTCATCAATGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCTAC------------------GAGCGTCCCTCG2011.001000000000000000000000000001000000000000000000000000000000000000
....................................................................CAGCGTCGG-CGCAGA--CGGATG---AGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................GTCGG-CGCAGA--CGGATG---AGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................GCAGA--CGGATG---AGGACATTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
......................CAGC-----------------------------AGCACGGAGGAGCCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................G---AGGACATTGTCATCAATGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
.................GCGTGCAGC-----------------------------AGCACGGAGGAGCCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................TCA------------------------------------------------ACCGCATGGCAAC---CGC..............................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CAAGTAGTGCTCAAAGT---AA------------------------------------------CCACGCT...................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000001000000000000000000000000000
......................CAGC-----------------------------AGCACGGAGGAGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GACGCAGCAGCTCGCTAAAGTTC.......................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................AGA--CGGATG---AGGACATTGTCATCAAT............................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000010000000000000000000000000000000000000000000000000
...................GTGCAGC-----------------------------AGCACGGAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
CAGCAGC------------AACAGGA-----------------------------GCACG-G---AGC----------C---AA--CGGATG---AGGACATTGTCATCAATGAGGTAAAT------------------------------------------------CCAACGCATGGCAACCATGGCATTTCAAGTAGCGCTCAAAGCTCAAA------------------------------------------CCTCGCTGACC---TCTCACATTGGACGCTGTCGAAGCCAGTGCGTCGCAGCAGCTCGCTAAAGTTCATTAACA------------------AACCTAC---------------TTGCCCCACTC-----CCCC-----------------A-------------TTT------------C-----------------------------------TGACATTAGGCAACGGTTA------------------CGAACGCCCCTCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.AGCAGC------------AACAGGA-----------------------------GCACG-G---A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002100001
.....................................................................................................................................................................................................................................................................CGCTGACC---TCTCACATTGGACGCTGTC.........................................................................................................................................................................................................................................2711.001100000
................................................................................................................................................................................................................................................................................................GTCGAAGCCAGTGCGTCG..........................................................................................................................................................................................................................1811.001100000
..........................................................................................................................................................................................................GCTCAAAGCTCAAA------------------------------------------CCTCGCTGAC................................................................................................................................................................................................................................................................2411.001100000
.....GC------------AACAGGA-----------------------------GCACG-G---AGC----------C---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..GCAGC------------AACAGGA-----------------------------GCACG-G---AGC----------C---A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100
.........................A-----------------------------GCACG-G---AGC----------C---AA--CGGATG---AG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
...CAGC------------AACAGGA-----------------------------GCACG-G---AGC----------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTAGGCAACGGTTA------------------CGAACGCCC....2511.001100000
.........................................................................................................................................................................................................................................................................GACC---TCTCACATTGGACGCTGTCGA.......................................................................................................................................................................................................................................2511.001000001
....................................................................................................................................................................................................................................................................TCGCTGACC---TCTCACATTGGA................................................................................................................................................................................................................................................2111.001100000
.AGCAGC------------AACAGGA-----------------------------GCACG-G---AGC----------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...........................................................G-G---AGC----------C---AA--CGGATG---AGGACATTGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.....................................................................................................................................................................................................................................................................................................AGCCAGTGCGTCGCAGCAGCTCGC...............................................................................................................................................................................................................2411.001000001
droGri2
CAGCAGC------------TTGGAG------------------------------------------CCAACAAGCGTT-CACA--CCGATG---AGGATATTGTGATCAATGAGGTAAATCA---------ACAACTTGAACAACAAGAACAACAACAACAAGTTCAACAACCGCATGGC------CGCATTTCAAGTACT------AGT---AA------------------------------------------TGTTGCTGACC---TCTCACATTGGACGCTGTCGAAGCCTGTGCGACGCAGCAGCTCGCTAAAATTCATTAACC------------------AACGTACAAGTACAAGTAGTATATCCC--CCA-----------------------------------------TCC------------C----AT---------TAGGACCCATCGC-------CCATGC----------T---------------CATGCAGAGCGTCCCTCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................................................................................................GAAGCCTGTGCGACGCAGCAGCTCGCT..............................................................................................................................................................................................................2711.00110

Generated: 05/17/2015 at 10:15 PM