ID:

dya_297

 Coordinate:

2L:11623155-11623305 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.0 -33.9 -33.8

Flybase annnotation

exon [dyak_GLEANR_2595:1]; CDS [Dyak\GE18811-cds]; intron [Dyak\GE18811-in]

Repeatable elements

NameClassFamilyStrand
Hoyak2DNAhAT-Ac-
DNAREP1_DYakRCHelitron-
mature
  1. dya_297  2L:11623193-11623214 +
  2. 2L:20845100-20845121 +
  3. 2R:1453539-1453560 +
  4. 3R:26769-26790 +
  5. 3R:29291-29312 +
  6. 3R:33181-33202 +
  7. 3R:431183-431204 +
  8. 4:590926-590947 +
  9. v2_chrUn_4616:214-235 +
  10. chr3h:20334-20355 +
  11. chrYh:105186-105207 +
  12. v2_chr2L_random_008:257-278 +
  13. v2_chr2L_random_008:24064-24085 +
  14. v2_chr2L_random_007:519-540 +
  15. v2_chr2L_random_015:1703-1724 +
  16. v2_chrX_random_045:21199-21220 +
  17. v2_chrUn_092:2379-2400 +
  18. v2_chrUn_273:117-138 +
  19. v2_chrUn_500:1477-1498 +
  20. v2_chrUn_866:60803-60824 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGCTTTTACCGCGAAATCCAATATGGAAGTCGTGTAGATACTTATGACAAGTAAGACAAGTGGGAGACCCCTATTTCACTTGAAAATAAGAGAGAACGCTATAGTCGAGTTCCCCGACTATCTGATACCCGTTACTCAGCTAGAAATCAAGAAGAAATTTCAAAACTGACAGTTTTTGGCGGTTTGTGGGCGTTAGAGTGGGCGTGGCAAAAAGTTTTTTGGCAAATCGATAGAAATTTACAAGACTAATA
**************************************************......(((((((((........)))))))))..............(((((((((((.......)))))))(((((.((((..(((..(((((((((.....((...........))....))))))))))))...)))).))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 V120
male body
...........................................ATGACAAGTAAGACAAGTGGGAG......................................................................................................................................................................................... 23 0 1 1.00 1 1 0
............................................................................................................................................................................................GGCGTTAGAGTGGGCGTGGCA.......................................... 21 0 20 0.95 19 19 0
........................................................................................AGAGAGAACGCTATAGTCGAGT............................................................................................................................................. 22 0 20 0.10 2 2 0
...............................................................................................ACGCTATAGTCGAGTTCCCCGACT.................................................................................................................................... 24 0 20 0.10 2 2 0
.................................................................................................................................................................................................................................ATCGATAGAAATTTACAAGACTAAT. 25 0 20 0.05 1 1 0
....................................................................................................................................................................................GGTTTGTGGGCGTTAGAGTGGGCG............................................... 24 0 20 0.05 1 1 0
.........................................................................................................CGAGTTCCCCGACTATCTGA.............................................................................................................................. 20 0 20 0.05 1 0 1

Anti-sense strand reads

ACGAAAATGGCGCTTTAGGTTATACCTTCAGCACATCTATGAATACTGTTCATTCTGTTCACCCTCTGGGGATAAAGTGAACTTTTATTCTCTCTTGCGATATCAGCTCAAGGGGCTGATAGACTATGGGCAATGAGTCGATCTTTAGTTCTTCTTTAAAGTTTTGACTGTCAAAAACCGCCAAACACCCGCAATCTCACCCGCACCGTTTTTCAAAAAACCGTTTAGCTATCTTTAAATGTTCTGATTAT
**************************************************......(((((((((........)))))))))..............(((((((((((.......)))))))(((((.((((..(((..(((((((((.....((...........))....))))))))))))...)))).))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528802
follicle cells		 M043
female body
 M056
embryo
 V052
head
 V120
male body		 M026
head
..............TTAGGTTATACCTTCAGCACATCTAT................................................................................................................................................................................................................... 26 0 1 6.00 6 6 0 0 0 0 0
................AGGTTATACCTTCAGCACATCTATGAAT............................................................................................................................................................................................................... 28 0 1 2.00 2 0 2 0 0 0 0
..........................................................TCACCCTCTGGGGATAAAGTGAACT........................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0
.....................................................CCTGTTCACCCTCTGGGGATAAAGT............................................................................................................................................................................. 25 1 1 1.00 1 0 0 1 0 0 0
.................GGTTATACCTTCAGCACATCTATGAAT............................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
.................................................TCATTCTGTTCACCCTCTGGGGAT.................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
..............TTAGGTTATACCTTCAGCAAATCTAT................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
...........................TCAGCACATCTATGAATACTGTTCAT...................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................TCGATCATTAGTTCTTCTTT.............................................................................................. 20 1 1 1.00 1 0 0 0 1 0 0
.......................................................................................................................................CGTCGACCATTAGTTCTTCTTT.............................................................................................. 22 3 3 0.67 2 0 0 2 0 0 0
..........................................................................................................................................CGACCATTAGTTCTTCTTT.............................................................................................. 19 2 5 0.40 2 0 0 2 0 0 0
.......................................................................................................................................CGTCGACCATTAGTTCTTCTT............................................................................................... 21 3 8 0.25 2 0 1 0 0 1 0
.................................................................................CTTTTATTCTCTCTTGCGATATCAGCTC.............................................................................................................................................. 28 0 6 0.17 1 0 0 1 0 0 0
.........................................................................................................................................TCGACCATTAGTTCTTCTT............................................................................................... 19 2 6 0.17 1 0 1 0 0 0 0
..........................................................................................................................................CGACCATTAGTTCTTCTT............................................................................................... 18 2 16 0.06 1 0 0 0 0 0 1
...................................................................................................................................................................TTGACTGTCAAAAACCGCCAAACAC............................................................... 25 0 17 0.06 1 0 1 0 0 0 0
...................................................................................TTTATTCTCTCTTGCGATATCAGCTC.............................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................TATTCTCTCTTGCGATATCAGCTC.............................................................................................................................................. 24 0 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................GTTTAGCTATCTTTAAATGTTCTGA.... 25 0 20 0.05 1 0 1 0 0 0 0
............................................................................................TCTTGCGATATCAGCTCAAGGGGCTGAT................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2L:11623105-11623355 + dya_297 TGCTTTTACCGCGAAATCCAA-------------------T-------ATGGAAGTCGTGTAG-----------------------ATACTTATGACA-AGTAA-----------GACAAGTGGG---------------AGA-------------CCCCTAT------------TTCA------------C---TT--GAAAATA-AGAGAGAACGCTATAGTCGAGTTCC-CCGACTATCTGATACCCGTTACTCAGCTAGAAATCAAGAAG-----A--------------------A-----------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------TTTCAAAACTGACAGTT-----T------------------------------------------------------TTGGCGGTTTGTGGGCGTTAGAGTGGGCGTGGCAAAAAG---------------------T---------------TTTTTG-GCAAATC---------------------GATAGAAATTTACA-AGACTAATA
droEre2 scaffold_4770:521265-521526 + GCGA----------AGTATAA-------------------A-------CTTCAAATTTTGTCG-----------------------ATGTTTTTGGCATATTGA-----------TACAAATTGG----------AAACTAAT-------------TG---GAAAAT------AATACA------------A---TTAAAAAAACA-ACATACAATGCTATAGTCGAGTTCC-CCTTCTATCAGATATCTGTTACTCAGCTA----------G--------------------------------------------------------TGGAAGTGGAAA-AAAA----TATACATAT-------------------------------------------------------------------------------ATATCAAT-------------------------------TTTCCAAAC--------GGCTT-------------------------GAC----------------------AGTTTAGGACG--------------GCGGGGGCGTGGCAAAACA---------------------A---------------TTTTTG-GCAAATC---------------------GATAAAAAAAATTAAAGAATAATA
droSec2 scaffold_8:2511101-2511290 - AAAATTA-----------------------------------------------------------------------------------------------------------------ATGGA---------------ATAC------------CCTTTAT------------TATA------------A---AC--GAAAACA-AGAGAGAATGCTGTAGTCGAGTGCC-TCGTCTATCAGATACCCGTTACTCAGCTG----------AT-----A--------------------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAATCTGTCGGTT-----T------------------------------------------------------TGGTCGGCTTGTGACTGTTTGAGTGGGCGTGGCAAAAAG---------------------T---------------TTTTTT-GCAAGTC---------------------GATAAAATTTTTCA-AGACTAAAA
droSim2 3r:206521-206764 + TTCGTTTACAG-----------------------------------------------------------------------------------------------------------------GTGAAACATTGAAGCTCTTACAGTTTCAAAAACTAT-GTCAATAAGATATTTACAAGAATCTATCTAT---CTAAGAAAACA-AGAGAGAATGTTATAGTGGAGTTTC-CCGACTGTCAGATACCCGTTACTCAGTTA----------CT-----C--------------------AGT--------------------------TGGAAGTGTGAACGAGA------------A-------------------------------------------------------------------A-----------------------------------T------------------------------------TTCAATATTTT-TTGGAATATATGTGGT----------------------AGTTTTGGGCGG---------------------------------------------------------------------TTTAAG-GCAACTC---------------------GATGGAAATTCGAA-ATACTAATA
dm3 chr2R:8928506-8928798 + ATATTCGATCTCAAAATCTA-----------GCAAAGA-TCGACTCCTG------------------------------------------TTTAGCATACTTAGATAGAGTAAATGTAAATTGT----------AATCTCGT-------------TCTCGAT------------TCCA------------A---TTG-CCAATCC-AAAATACTCGCTTTAGTCGAGTGCA-CCGACTATCAGATACCCGTTACTCTGCTA----------A--------------------------------------------------------TGTAAGTGCGAACGAGA------------C-------------------------------------------------------------------A-----------------------------------T------------------------------T-----T-CCATGTTTTGCTGGCTTATAGGTAAAACAAGAATAATATGAAAAAAAT-----TAAAAGATTTGTGGGCGTTAAAAGGGGCGTA---------------------------------------------TTCTTG-GTATAGC---------------------GATAGAAATTTACA-AGACTAATA
droEug1 scf7180000409276:9644-9908 - CTTTTTTAAAGCAAAGCAGG-------------------GCGGT-------CCGATTTTGCAACCGAGTAAGGCAGAACAAAAGATAAAGTTGTGAGA-A-------------------------------------------------------------------------------------------G---TA--AAAAACA-AGAGGAAACGCTATAGTCGAGTGCC-GCGACTATAAGATACCCGTTACTGTTTTA----------CA-----A--------------------C-----ATTTTAAAATATTATTTTGCTAGTGGAAATTCACA-------------------------------------ATGCGCCACCTATTGTCAGAGGAAGTATGTTGAGTATGCTTATAGTGAC-----------------------------------------------------------------------------------------------------------------------------------------GTCACTGCCCATG---------------------TGAGGCCTTATAACCTT---A-------------------------------------------------------------ATTTCTTTA
droBia1 scf7180000302213:30692-30991 - TGCCTATAC-GCAAAGATAAATATAAATAGTGCACA------------------------------------------------------------------AA-----------TGTATA-----------------CAGCCCTCA----GACAACCATTAT------------GAAA------------CTAAAA--AAAATCA-AGGAAGAACGTTATTGTCGAGCGCT-TCGACCATCAGATACCCGTTACTCAGCTA----------AG-----C--------------------A-------------------------------AA-----AGGAAAATGGAGATATAAAAGCAGCAAAGCAATATAGTAAAGCTCCACCTAAAGACTGTT-----TTGT------------------------------------------------------TAAACAGTTTTAAGC-----------------GTT--T------------------------------------------------------T-AGTGGTTTG-GGGCGCCAGACTGGGCGTGGCAAACAT---------------------T---------------TTCTTAGCTTAATC---------------------GAAAGACATAGTTGAGATATAGCA
droTak1 scf7180000412596:7714-7960 + TGTTTTCGTTG-----------------------------A--------------TTTCGAATCGAACTTTTACAGAAATATGCAT-------------AGTAA-----------TGTAAG-----------------CAACTTTCT----G----C---TTT------------TATA------------C---TT--TTAAACA-AGAGAGAACGCTATAGTCGGGTGCC-CCGACTATCAGATACCCGTTACTCAGCTA----------A--------------------------------------------------------AGGGAGTGCGAAGGAGATGGAGA----A------------------------------------------------------------------AAACTTTGATCCGCCGTAACTTTTTAACGAATGGTCCGA---------------TTTA----------------------------------------------------------------------------------------------------------AAAAAT---------------------T---------------TCTTCT-ACATTTC---------------------GATAGGTATTGATA-AACACAATA
droEle1 scf7180000489368:3758-3888 - A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA-AGAAGAAACGATATAGTCGAGTTCC-TCGACTTTTAGACACCCGTTACTCAGTTA----------AC-----C--------------------A-------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------TTTGAAAACCCAGAAAT-----T------------------------------------------------------TCGCGATTTTTTAGGAGTTAGAGTGGGCGTGGCCAC--G---------------------T---------------TTTTAA-ATAAA-----------------------------------------------
droRho1 scf7180000779172:5882-6128 - TGCTTGCT--------------------------GCAGTGCGACCCATGCATAAATCATAT-------------------------------------------------------GTGTG-----------------CACTTGCAA----GAAAACTGT-GTGAAC------TCTACA------------A--AAA--AAAAACA-AGAGAGAACGCTATAGTCGGGTGCC-CCGACTATCAGATACCCGTTACTCAGGTA----------A--------------------------------------------------------AGGGAGTGCGAGGGAGATGGAGATA--G------------------------------------------------------------------AAACTTTGATCACGCATAACTTTTTAACGAATGGTCCGA---------------TTTG----------------------------------------------------------------------------------------------------------AAAAAT---------------------T---------------TCTTCT-ACATTTC---------------------GATAGGTATTGATA-AACACAAT-
droFic1 scf7180000454015:83241-83398 - AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGTAAAGCTATAGTCGAGTGCC-TCGACTATGAGATATCCGATACTCAAAAG----------AACAATTTTGTTAAAAGTTTAATCGCGAA-------------------------------------------------------------------------------GAT--------------------------------------------------------------------------------------------------------------------CT-----------------------------------------------------C-TGCGC-------CTA-TACAGGCAGCAAGGCTAAAACGCCTATGAGGGTAGAAAACTTTTTAAAAGTCTTAAGC---------------------------------------------------------TG
droKik1 scf7180000302682:1552981-1553135 - AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAA-AGAAAGAACGCCATTGTCGAGTGCC-CCGAATATGAGATACCCGGCACTCAAGGC----------TC-----T--------------------ATT--------------------------ACAAAACATTAAACAAA------------G-------------------------------------------------------------------A-----------------------------------C------------------------------------TCA---------------------------------------------------------------------------------------AATA-CAGCTTAGAA--------------------------------AGCTAAGCCAAAGAAAAAGTTATTTAAATTAAATAAACTTAGA-AATTTAATA
droAna3 scaffold_12947:221248-221373 - TATAAA--------AGT-----------TGTGCAGAAGTAGAAACC--------------------------------------------------------------------------ATGGA---------------AGGTTCA----G----T----CT------------TTCT-----------AA---CTT-AA--AAATGAAAGGACGGCTATAGTAGAGTTTC-CCGACTATGTGATACCAGGTACTAGCATA----------TA-----A--------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA-A-----CAA
droBip1 scf7180000396292:21545-21699 + AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAGAAAATACGGCTTTATTCCAGTTTC-CCGACTATATTATACCCGGTACTCATCTC----------AT-----A--------------------TC-CATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--TAAACTAA------CCTT-----------------------------------------------------------TATAGTTTAAACTTTAGAGCAGGTGTGCCCAAACG-CTGCTTACGACGGAGA------------------------------AATT---------------------CCAATAAATTCAAA-A------GA
dp5 2:17975140-17975212 - AG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAACGTTTTAGTCGTGTGAC-TCGACTATGATGTACCCCGTGTTCAGTTG----------GG-----G--------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATC---------------------AAGGGGAATTCAA-----------
droPer2 scaffold_136:77420-77505 - GAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TTGAATGTCAGAGACTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCACTTTGTGGGGGCGAAAGTGGGCGGGGCAAAG-----------------------T---------------T-----------TT---------------------GAAACATACTTGTA-AGAGTAACA
droWil2 scf2_1100000003732:23-125 + CAACTATTT-------------------TCTG------CGC---------------------GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAC-TAAGCGAGTATAT----------------------AAACCA-----A--------------------A-----------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------TTTTAAGAAAAACAGTT-----T------------------------------------------------------TATGTAAATTCTGGGGGCGTAAGGGGGCGTGGCAAAAAT---------------------T---------------T----------------------------------------------------------
droVir3 scaffold_12855:4298992-4299039 + AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATA-AGTAAGGATGCTTTAGTCGAACATC-TCTGCTAGCAGATACCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_5611:2043-2195 + AAGGCCG-----------------------------------------------------------------------------------------------------------------GCTAG---------------TAG-------------TCTCCAT------------ACCA------------T---TT--AAAAATA-AGTAAGAACGTTGCAGTCGGGCGTTACCGACTGCGGAATACTCATTCAC-ATCCC----------AT---------CAACAATTTAGTAGTTAA-------------------------------------------------------------------------------GTTTCGCTCTAATACTGTA-----G-AT------------------------------------------------------TATACAGGT------------------------------------T----------------------------------------------TTTCCGA-------------------------------------------------------------------TT---------------------------------------------------------TG
droGri2 scaffold_15110:23395311-23395395 + ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAACA-AGAAAGAATGCTGTAGTCGAGTGAGATCGACTACGATATACCTTGAACCCAGTTG----------TT-----A--------------------AA-TATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTAAAACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TGCTTTTACCGCGAAATCCAA-------------------T-------ATGGAAGTCGTGTAG-----------------------ATACTTATGACA-AGTAA-----------GACAAGTGGG---------------AGA-------------CCCCTAT------------TTCA------------C---TT--GAAAATA-AGAGAGAACGCTATAGTCGAGTTCC-CCGACTATCTGATACCCGTTACTCAGCTAGAAATCAAGAAG-----A--------------------A-----------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------TTTCAAAACTGACAGTT-----T------------------------------------------------------TTGGCGGTTTGTGGGCGTTAGAGTGGGCGTGGCAAAAAG---------------------T---------------TTTTTG-GCAAATC---------------------GATAGAAATTTACA-AGACTAATASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................ATGACA-AGTAA-----------GACAAGTGGG---------------AG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTTAGAGTGGGCGTGGCA.....................................................................................................21200.9519019000000000
...............................................................................................................................................................................................................AGAGAGAACGCTATAGTCGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10202000000000
......................................................................................................................................................................................................................ACGCTATAGTCGAGTTCC-CCGACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC---------------------GATAGAAATTTACA-AGACTAAT.25200.05101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGTGGGCGTTAGAGTGGGCG..........................................................................................................24200.05101000000000
................................................................................................................................................................................................................................CGAGTTCC-CCGACTATCTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000010000
droEre2
GCGA----------AGTATAA-------------------A-------CTTCAAATTTTGTCG-----------------------ATGTTTTTGGCATATTGA-----------TACAAATTGG----------AAACTAAT-------------TG---GAAAAT------AATACA------------A---TTAAAAAAACA-ACATACAATGCTATAGTCGAGTTCC-CCTTCTATCAGATATCTGTTACTCAGCTA----------G--------------------------------------------------------TGGAAGTGGAAA-AAAA----TATACATAT-------------------------------------------------------------------------------ATATCAAT-------------------------------TTTCCAAAC--------GGCTT-------------------------GAC----------------------AGTTTAGGACG--------------GCGGGGGCGTGGCAAAACA---------------------A---------------TTTTTG-GCAAATC---------------------GATAAAAAAAATTAAAGAATAATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droSec2
AAAATTA-----------------------------------------------------------------------------------------------------------------ATGGA---------------ATAC------------CCTTTAT------------TATA------------A---AC--GAAAACA-AGAGAGAATGCTGTAGTCGAGTGCC-TCGTCTATCAGATACCCGTTACTCAGCTG----------AT-----A--------------------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAATCTGTCGGTT-----T------------------------------------------------------TGGTCGGCTTGTGACTGTTTGAGTGGGCGTGGCAAAAAG---------------------T---------------TTTTTT-GCAAGTC---------------------GATAAAATTTTTCA-AGACTAAAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................CTGTAGTCGAGTGCC-TCGTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
........................................................................................................................................................................................................AAAACA-AGAGAGAATGCTGTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.3320020
.........................................................................................................................................................................................................AAACA-AGAGAGAATGCTGTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.2520020
...........................................................................................................................................................................................................ACA-AGAGAGAATGCTGTAGTCGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.1411000
............................................................................................................................................................................................................CA-AGAGAGAATGCTGTAGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.1320020
..........................................................................................................................................................................................................AACA-AGAGAGAATGCTGTAGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.1110010
..........................................................................................................................................................................................................AACA-AGAGAGAATGCTGTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.1010010
..........................................................................................................................................................................................................AACA-AGAGAGAATGCTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18120.0810010
............................................................................................................................................................................................................CA-AGAGAGAATGCTGTAGTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.0611000
.............................................................................................................................................................................................................A-AGAGAGAATGCTGTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18180.0610010
droSim2
TTCGTTTACAG-----------------------------------------------------------------------------------------------------------------GTGAAACATTGAAGCTCTTACAGTTTCAAAAACTAT-GTCAATAAGATATTTACAAGAATCTATCTAT---CTAAGAAAACA-AGAGAGAATGTTATAGTGGAGTTTC-CCGACTGTCAGATACCCGTTACTCAGTTA----------CT-----C--------------------AGT--------------------------TGGAAGTGTGAACGAGA------------A-------------------------------------------------------------------A-----------------------------------T------------------------------------TTCAATATTTT-TTGGAATATATGTGGT----------------------AGTTTTGGGCGG---------------------------------------------------------------------TTTAAG-GCAACTC---------------------GATGGAAATTCGAA-ATACTAATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................CCGTTACTCAGTTA----------CT-----C--------------------AGT--------------------------TGGA....................................................................................................................................................................................................................................................................................................................................................................24114.001400000070700000000
............................................................................................................................................................................................................................................................TACTCAGTTA----------CT-----C--------------------AGT--------------------------TGGAAGTGTGAA............................................................................................................................................................................................................................................................................................................................................................28111.001100000029000000000
........................................................................................................................................................................................................................................................CCGTTACTCAGTTA----------CT-----C--------------------AGT--------------------------TGGAAGTG................................................................................................................................................................................................................................................................................................................................................................2812.00200000020000000000
........................................................................................................................................................................................................................................................CCGTTACTCAGTTA----------CT-----C--------------------AGT--------------------------TGGAAGT.................................................................................................................................................................................................................................................................................................................................................................2712.00200000010001000000
TTCGTTTACAG-----------------------------------------------------------------------------------------------------------------GTGAAACATTGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000002000000000
.................................................................................................................................................................................................................................................................................T-----C--------------------AGT--------------------------TGGAAGTGTGAACGAGA------------A-------------------------------------------------------------------A-----------------------------------T------------------------------------..............................................................................................................................................................................................2511.00100000000001000000
..............................................................................................................................................................................................................................GTGGAGTTTC-CCGACTGTCAGATACCCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
...........................................................................................................................................TCTTACAGTTTCAAAAACTAT-GTCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
........................................................................................................................................................................................................................................................CCGTTACTCAGTTA----------CT-----C--------------------AGT--------------------------TGGAAG..................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTGGAATATATGTGGT----------------------AGTTTTGGGC..................................................................................................................................2711.00100000010000000000
............................................................................................................................................................................................................................................................TACTCAGTTA----------CT-----C--------------------AGT--------------------------TGGAAGT.................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
......TACAG-----------------------------------------------------------------------------------------------------------------GTGAAACATTGAAGCTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
...................................................................................................................................................................................................................................................................TTA----------CT-----C--------------------AGT--------------------------TGGAAGTGTGAACGAGA------------...........................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGG---------------------------------------------------------------------TTTAAG-GCAACTC---------------------GATGGAA.................2711.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................ACGAGA------------A-------------------------------------------------------------------A-----------------------------------T------------------------------------TTCAATATTTT-TTGGAATA..........................................................................................................................................................................2811.00100000000010000000
................................................................................................................................................................................................................................GGAGTTTC-CCGACTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
............................................................................................................................................................................................................................................................TACTCAGTTA----------CT-----C--------------------AGT--------------------------TGGAAGTGTGAAC...........................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGG---------------------------------------------------------------------TTTAAG-GCAACTC---------------------GATGGA..................2611.00100000000100000000
......................................................................................................................................................................................................................................TC-CCGACTGTCAGATACCCGTTACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.00200000000020000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGG---------------------------------------------------------------------TTTAAG-GCAACTC---------------------GATGGAAA................2811.00100000010000000000
............................................................................................................................................................................................................................................ACTGTCAGATACCCGTTACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.75300003000000000000
.....................................................................................................................................................................................................................................TTC-CCGACTGTCAGATACCCGTTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000001000000000
.....................................................................................................................................................................................................................................TTC-CCGACTGTCAGATACCCGTTACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000001000000000
.........................................................................................................................................................................................................................................................................................................................................TGGAAGTGTGAACGAGA------------A-------------------------------------------------------------------A-----------------------------------T------------------------------------TTCAATA.......................................................................................................................................................................................2720.50100000000010000000
......................................................................................................................................................................................................................................................................................................................................................GAGA------------A-------------------------------------------------------------------A-----------------------------------T------------------------------------TTCAATATT.....................................................................................................................................................................................1680.13100000000001000000
........................................................................................................................................................................................................AAAACA-AGAGAGAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
dm3
ATATTCGATCTCAAAATCTA-----------GCAAAGA-TCGACTCCTG------------------------------------------TTTAGCATACTTAGATAGAGTAAATGTAAATTGT----------AATCTCGT-------------TCTCGAT------------TCCA------------A---TTG-CCAATCC-AAAATACTCGCTTTAGTCGAGTGCA-CCGACTATCAGATACCCGTTACTCTGCTA----------A--------------------------------------------------------TGTAAGTGCGAACGAGA------------C-------------------------------------------------------------------A-----------------------------------T------------------------------T-----T-CCATGTTTTGCTGGCTTATAGGTAAAACAAGAATAATATGAAAAAAAT-----TAAAAGATTTGTGGGCGTTAAAAGGGGCGTA---------------------------------------------TTCTTG-GTATAGC---------------------GATAGAAATTTACA-AGACTAATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................CCGTTACTCTGCTA----------A--------------------------------------------------------TGTAAGTGCG..............................................................................................................................................................................................................................................................................................................................................................25112.00120000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000500000000001000000000000000010000000
........................................................................................................................................................................................................................................................CCGTTACTCTGCTA----------A--------------------------------------------------------TGTAAGTGC...............................................................................................................................................................................................................................................................................................................................................................24110.00100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000020110000000000000000000000001000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----TAAAAGATTTGTGGGCGTTAAAAGG..............................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAGGGGCGTA---------------------------------------------TTCTTG-GTA.................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAACAAGAATAATATGAAAAAAAT-----.......................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TTG-CCAATCC-AAAATACTCGCTTTAGTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CCATGTTTTGCTGGCTTATAGGTAAAA.................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAGGGGCGTA---------------------------------------------TTCTTG-GTATAGC---------------------........................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000
........................................................................................................................................................................................................................................................CCGTTACTCTGCTA----------A--------------------------------------------------------TGTAAGTGCGA.............................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGCGTTAAAAGGGGCGTA---------------------------------------------TTC........................................................2512.0020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CCATGTTTTGCTGGCTTATAGGTA....................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATTTGTGGGCGTTAAAAGGGG............................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGC---------------------GATAGAAATTTACA-AGAC.....2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGGCGTTAAAAGGGGCGT.........................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TAGCATACTTAGATAGAGTAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TACTCTGCTA----------A--------------------------------------------------------TGTAAGTGCGAACGA.........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................ACTTAGATAGAGTAAATGTAAATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGGCGTTAAAAGG..............................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TACTCTGCTA----------A--------------------------------------------------------TGTAAGTGCGAACGAGA------------...........................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAT-----TAAAAGATTTGTGGGC.......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAATATGAAAAAAAT-----TAAAAGATT..............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TTG-CCAATCC-AAAATACTCGCTTTAGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTGGCTTATAGGTAAAACAAGAA...........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGGCGTTAAAAGGGGC...........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................TTAGATAGAGTAAATGTAAATTGT----------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CCGTTACTCTGCTA----------A--------------------------------------------------------TGTAAGTGCGAA............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATAGGTAAAACAAGAATAATAT.....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CCGTTACTCTGCTA----------A--------------------------------------------------------TGTAAGTG................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATAGGTAAAACAAGAATAATATGA...................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGGTAAAACAAGAATAATATGA...................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TCTGCTA----------A--------------------------------------------------------TGTAAGTGCGAACGAGA------------...........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGGCGTTAAAAGGGGC...........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGCGTTAAAAGGGA............................................................................................................1811.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................GA------------C-------------------------------------------------------------------A-----------------------------------T------------------------------T-----T-CCATGTTTTGCTGGCTTA..........................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TCGAT------------TCCA------------A---TTG-CCAATCC-AAAATAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGGCGTTAAAAGGGGCGTA---------------------------------------------TTC........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGCGTTAAAAGGGGC...........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TG-CCAATCC-AAAATACTCGCTTTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAAAAAAAT-----TAAAAGATT..............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTAAGTGCGAACGAGA------------C-------------------------------------------------------------------A-----------------------------------T------------------------------T-----..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTAAAACAAGAATAATATGAAAAAA..............................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAAAAT-----TAAAAGATTTGTGGGC.......................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CCGTTACTCTGCTA----------A--------------------------------------------------------TGTAAGTGCGAAA...........................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAGGTAAAACAAGAATAATATG....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAGGGGCGTA---------------------------------------------TTCTTG-....................................................2011.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TAGAGTAAATGTAAATTGT----------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------GATAGAAATTTACA-A........1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CA-CCGACTATCAGATACCCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................CAGATACCCGTTACTCTGCTA----------.................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CGACTATCAGATACCCGTTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CCGACTATCAGATACCCGTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
droEug1
CTTTTTTAAAGCAAAGCAGG-------------------GCGGT-------CCGATTTTGCAACCGAGTAAGGCAGAACAAAAGATAAAGTTGTGAGA-A-------------------------------------------------------------------------------------------G---TA--AAAAACA-AGAGGAAACGCTATAGTCGAGTGCC-GCGACTATAAGATACCCGTTACTGTTTTA----------CA-----A--------------------C-----ATTTTAAAATATTATTTTGCTAGTGGAAATTCACA-------------------------------------ATGCGCCACCTATTGTCAGAGGAAGTATGTTGAGTATGCTTATAGTGAC-----------------------------------------------------------------------------------------------------------------------------------------GTCACTGCCCATG---------------------TGAGGCCTTATAACCTT---A-------------------------------------------------------------ATTTCTTTASizeHit CountTotal NormTotal
No Reads
droBia1
TGCCTATAC-GCAAAGATAAATATAAATAGTGCACA------------------------------------------------------------------AA-----------TGTATA-----------------CAGCCCTCA----GACAACCATTAT------------GAAA------------CTAAAA--AAAATCA-AGGAAGAACGTTATTGTCGAGCGCT-TCGACCATCAGATACCCGTTACTCAGCTA----------AG-----C--------------------A-------------------------------AA-----AGGAAAATGGAGATATAAAAGCAGCAAAGCAATATAGTAAAGCTCCACCTAAAGACTGTT-----TTGT------------------------------------------------------TAAACAGTTTTAAGC-----------------GTT--T------------------------------------------------------T-AGTGGTTTG-GGGCGCCAGACTGGGCGTGGCAAACAT---------------------T---------------TTCTTAGCTTAATC---------------------GAAAGACATAGTTGAGATATAGCASizeHit CountTotal NormTotal
No Reads
droTak1
TGTTTTCGTTG-----------------------------A--------------TTTCGAATCGAACTTTTACAGAAATATGCAT-------------AGTAA-----------TGTAAG-----------------CAACTTTCT----G----C---TTT------------TATA------------C---TT--TTAAACA-AGAGAGAACGCTATAGTCGGGTGCC-CCGACTATCAGATACCCGTTACTCAGCTA----------A--------------------------------------------------------AGGGAGTGCGAAGGAGATGGAGA----A------------------------------------------------------------------AAACTTTGATCCGCCGTAACTTTTTAACGAATGGTCCGA---------------TTTA----------------------------------------------------------------------------------------------------------AAAAAT---------------------T---------------TCTTCT-ACATTTC---------------------GATAGGTATTGATA-AACACAATASizeHit CountTotal NormTotal
No Reads
droEle1
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA-AGAAGAAACGATATAGTCGAGTTCC-TCGACTTTTAGACACCCGTTACTCAGTTA----------AC-----C--------------------A-------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------TTTGAAAACCCAGAAAT-----T------------------------------------------------------TCGCGATTTTTTAGGAGTTAGAGTGGGCGTGGCCAC--G---------------------T---------------TTTTAA-ATAAA-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGCTTGCT--------------------------GCAGTGCGACCCATGCATAAATCATAT-------------------------------------------------------GTGTG-----------------CACTTGCAA----GAAAACTGT-GTGAAC------TCTACA------------A--AAA--AAAAACA-AGAGAGAACGCTATAGTCGGGTGCC-CCGACTATCAGATACCCGTTACTCAGGTA----------A--------------------------------------------------------AGGGAGTGCGAGGGAGATGGAGATA--G------------------------------------------------------------------AAACTTTGATCACGCATAACTTTTTAACGAATGGTCCGA---------------TTTG----------------------------------------------------------------------------------------------------------AAAAAT---------------------T---------------TCTTCT-ACATTTC---------------------GATAGGTATTGATA-AACACAAT-SizeHit CountTotal NormTotal
No Reads
droFic1
AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGTAAAGCTATAGTCGAGTGCC-TCGACTATGAGATATCCGATACTCAAAAG----------AACAATTTTGTTAAAAGTTTAATCGCGAA-------------------------------------------------------------------------------GAT--------------------------------------------------------------------------------------------------------------------CT-----------------------------------------------------C-TGCGC-------CTA-TACAGGCAGCAAGGCTAAAACGCCTATGAGGGTAGAAAACTTTTTAAAAGTCTTAAGC---------------------------------------------------------TGSizeHit CountTotal NormTotal
No Reads
droKik1
AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAA-AGAAAGAACGCCATTGTCGAGTGCC-CCGAATATGAGATACCCGGCACTCAAGGC----------TC-----T--------------------ATT--------------------------ACAAAACATTAAACAAA------------G-------------------------------------------------------------------A-----------------------------------C------------------------------------TCA---------------------------------------------------------------------------------------AATA-CAGCTTAGAA--------------------------------AGCTAAGCCAAAGAAAAAGTTATTTAAATTAAATAAACTTAGA-AATTTAATASizeHit CountTotal NormTotal
No Reads
droAna3
TATAAA--------AGT-----------TGTGCAGAAGTAGAAACC--------------------------------------------------------------------------ATGGA---------------AGGTTCA----G----T----CT------------TTCT-----------AA---CTT-AA--AAATGAAAGGACGGCTATAGTAGAGTTTC-CCGACTATGTGATACCAGGTACTAGCATA----------TA-----A--------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA-A-----CAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAGAAAATACGGCTTTATTCCAGTTTC-CCGACTATATTATACCCGGTACTCATCTC----------AT-----A--------------------TC-CATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--TAAACTAA------CCTT-----------------------------------------------------------TATAGTTTAAACTTTAGAGCAGGTGTGCCCAAACG-CTGCTTACGACGGAGA------------------------------AATT---------------------CCAATAAATTCAAA-A------GASizeHit CountTotal NormTotal
No Reads
dp5
AG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAACGTTTTAGTCGTGTGAC-TCGACTATGATGTACCCCGTGTTCAGTTG----------GG-----G--------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATC---------------------AAGGGGAATTCAA-----------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TTGAATGTCAGAGACTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCACTTTGTGGGGGCGAAAGTGGGCGGGGCAAAG-----------------------T---------------T-----------TT---------------------GAAACATACTTGTA-AGAGTAACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGGCAAAG-----------------------T---------------T-----------TT---------------------GAAA....................19200.306000006
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGTGGGGGCGAAAGTGGG............................................................................................................21200.051000001
droWil2
CAACTATTT-------------------TCTG------CGC---------------------GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAC-TAAGCGAGTATAT----------------------AAACCA-----A--------------------A-----------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------TTTTAAGAAAAACAGTT-----T------------------------------------------------------TATGTAAATTCTGGGGGCGTAAGGGGGCGTGGCAAAAAT---------------------T---------------T----------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAATTCTGGGGGCGTAAGGG..............................................................................................................23200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTT-----T------------------------------------------------------TATGTAAATTCTGGGGGCG....................................................................................................................25200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAATTCTGGGGGCGTAAGG...............................................................................................................22200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------------------TTTTAAGAAAAACAGTT-----T------------------------------------------------------TATGTAAA...............................................................................................................................27200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----T------------------------------------------------------TATGTAAATTCTGGGGGCGTAAG................................................................................................................25200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAAATTCTGGGGGCGTAAG................................................................................................................23200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGGGGCGTAAGGGGGC...........................................................................................................19200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAAATTCTGGGGGCGTAAGGG..............................................................................................................25200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----T------------------------------------------------------TATGTAAATTCTGGGGG......................................................................................................................20200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------------------------------TATGTAAATTCTGGGGGCGTA..................................................................................................................22200.05101000
CAACTATTT-------------------TCTG------CGC---------------------GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAC-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTAAGGGGGCGTGGC......................................................................................................18200.05100010
droVir3
AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATA-AGTAAGGATGCTTTAGTCGAACATC-TCTGCTAGCAGATACCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AAGGCCG-----------------------------------------------------------------------------------------------------------------GCTAG---------------TAG-------------TCTCCAT------------ACCA------------T---TT--AAAAATA-AGTAAGAACGTTGCAGTCGGGCGTTACCGACTGCGGAATACTCATTCAC-ATCCC----------AT---------CAACAATTTAGTAGTTAA-------------------------------------------------------------------------------GTTTCGCTCTAATACTGTA-----G-AT------------------------------------------------------TATACAGGT------------------------------------T----------------------------------------------TTTCCGA-------------------------------------------------------------------TT---------------------------------------------------------TGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................CGCTCTAATACTGTA-----G-AT------------------------------------------------------TATACAGG...........................................................................................................................................................................................................................26200.65131200010
...................................................................................................................................................................................................................................GCGTTACCGACTGCGGAATACTCATTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.255500000
................................................................................................................................................................................................................GTAAGAACGTTGCAGTCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102200000
.................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAATACTGTA-----G-AT------------------------------------------------------TATACAGG...........................................................................................................................................................................................................................25200.102200000
................................................................................................................................................................................................................................................................................................................................................................................................CGCTCTAATACTGTA-----G-AT------------------------------------------------------TATACAGGT------------------------------------......................................................................................................................................................................................27200.102010010
........................................................................................................................................................................................................AAAATA-AGTAAGAACGTTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.101100000
.............................................................................................................................................................................................................................................................................................................................................................................................TTTCGCTCTAATACTGTA-----G-AT------------------------------------------------------TATACA.............................................................................................................................................................................................................................27200.051100000
...............................................................................................................................................................................................................................................................C-ATCCC----------AT---------CAACAATTTAGTAGTTAA-------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................26200.051100000
.......................................................................................................................................................................................................................CGTTGCAGTCGGGCGTTACCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................CGCTCTAATACTGTA-----G-AT------------------------------------------------------TATAC..............................................................................................................................................................................................................................23200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAATACTGTA-----G-AT------------------------------------------------------TATAC..............................................................................................................................................................................................................................22200.051100000
.................................................................................................................................................................................................................TAAGAACGTTGCAGTCGGGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
............................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------------------GTTTCGCTCTAATACTGTA-----G-AT------------------------------------------------------...................................................................................................................................................................................................................................23200.051000001
................................................................................................................................................................................................................................................................................................................................................................................................CGCTCTAATACTGTA-----G-AT------------------------------------------------------TATACAGGT------------------------------------T----------------------------------------------T......................................................................................................................................29200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................CGCTCTAATACTGTA-----G-AT------------------------------------------------------TATACAG............................................................................................................................................................................................................................25200.051100000
................................................................................................................................................................................................................................CGGGCGTTACCGACTGCGGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................CGCTCTAATACTGTA-----G-AT------------------------------------------------------TATACA.............................................................................................................................................................................................................................24200.051100000
..............................................................................................................................................................................................................................................TGCGGAATACTCATTCAC-ATCCC----------AT---------C.....................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
droGri2
ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAACA-AGAAAGAATGCTGTAGTCGAGTGAGATCGACTACGATATACCTTGAACCCAGTTG----------TT-----A--------------------AA-TATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTAAAACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:14 PM