dya_295

CDS [Dyak\GE10773-cds]; exon [dyak_GLEANR_1067:5]; CDS [Dyak\GE10773-cds]; exon [dyak_GLEANR_1067:4]; intron [Dyak\GE10773-in]

##################################################-------------------------------------------------------------################################################## AGATTGATCCCAGAGAAGATGAAAGTTCAGAGACTGTAGTAGAAAACTCGGTAAGTGCCTTTCATTATCTAATAACAAAAATGTGTTATAATTTAGATTTATAACCCACAGCTCGTTAAACTGGTGATTGACAACCAAACAGGACGATTGAAGTCGGTCGA ************************************************....(((.........(((((((((((......))))))....)))))........)))..************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V120 male body	M043 female body	V058 head
.....GATCCCAGAGAAGATGAAAGTT......................................................................................................................................	22	0	1	1.00	1	1	0	0
.................GATGAAAGTTCAGAGACTGTAGTAGAAA....................................................................................................................	28	0	1	1.00	1	1	0	0
............................................................................AAAAATGTGTTATAATTT...................................................................	18	0	2	1.00	2	0	2	0
..............GAAGATGAAAGTTCAGAGACT..............................................................................................................................	21	0	1	1.00	1	1	0	0
.......................................TAGCACACTCGGTAAATGCCT.....................................................................................................	21	3	3	0.33	1	0	0	1

Species	Coordinate	ID	Alignment
droYak3	2L:11413700-11413860 -	dya_295	AGATTGATCCCAG-----------AGAAGATGAAAGT------TC---AGAGACTGTAGTAGAAAACTCGGTAAGTGCCTTTCATTATC-------------------------------------------TAATAACA-------------------------------AAAATG-----------------------------------TGT--TATAA---------------------------------------TTTAGATTTATA-ACCCACAGCTCGTTAAACTGGTGATTGACAACCAAACAGGACGATTGAAGTCGGTCGA
droEre2	scaffold_4929:9357427-9357587 -		AGATAAGCCCCGG-----------GGAAGATGGAAAT------TC---AGAGACTGTAGTGGAAAACTCAGTGAGTGCCCTCAATTGTC-------------------------------------------TAATAACG-------------------------------AAAACG-----------------------------------TTG--TATAC---------------------------------------CTTCGATAAATA-ACCCGCAGCTTGTCAAACTAGTGATTGACAACCAAACAGGACGATTGAAGTCCGTCGA
droSec2	scaffold_3:4246327-4246480 -		ATGCTGAGACCTA-----------------CGATGAC------GG---AGAGACGATTGTGCAGACATCGGTAAGTGCCA--AACTGTT-------------------------------------------TAATAGTG-------------------------------GAAACA-----------------------------------CCT--CTTCC---------------------------------------TAACTATTTAAAATCCATTAGCTGATCAAGTTGGTGCTGGACAACAAAACCGGCCTCTTGAAGAGGGTTGA
droSim2	2l:8476415-8476575 -		AGATTAATCCCAG-----------AGAAGATGAAAAT------TC---AGAGACTGTTGTAGAAAACTCGGTAAGTGCCTTTGATTGTC-------------------------------------------TAATAACT-------------------------------TAAATG-----------------------------------TTT--TATCC---------------------------------------CTAAGATATATA-ACCCATAGGTTGTTAAACTAGTGATGGACAACCATACAGGACGATTGAAGTCGGTCGA
dm3	chr2L:8770304-8770466 -		AGATTAATCCCAG-----------AGAAGATAACAAT------TC---AGAGACTGTTGTAGAAAACTCGGTAAGTGCATTTGATTGTC-------------------------------------------TAATAACT-------------------------------TAAATG-----------------------------------TTTTTTATCC---------------------------------------CTACGATATATA-ACCCATAGGTTGTTAAACTAGTGATGGACAACCATACAGGACGATTGAAGTCGGTCGA
droEug1	scf7180000409554:737070-737230 +		AGATTAGCCCCCG-----------AGAAATTGAAGGT------TC---TGAGACTGTAGTAGAGAATTCTGTAAGTTCTTAAGTAAATA-------------------------------------------TATATTAA-------------------------------AAAATC-----------------------------------TTT--TATTT---------------------------------------ATAAAATATTTA-ATCCGCAGCTTGTAAAACTGGTGATTGACAACCAAACAGGACGCTTGAAGTCAGTTGA
droBia1	scf7180000301518:989556-989714 +		AGATTGCCCAGCG-----------AGAAAATGATAGC------TC---CGAGACTGTAGTTGAAAATTCAGTAAGTCTATATTTATAAG----------------------------------------------TGGTG-------------------------------AAAATA----------------------------------GGCT--AGTTT---------------------------------------ATAAAAAATCTC-ACCCACAGCTAGTCAAACTGGTAATTGACAACAACACAGGACGCTTAAAGTCGGTTGA
droTak1	scf7180000410580:60911-61074 -		AGCTTAGCCAGCG-----------GGAAATTGATAGT------TC---CGAGACCGTAGTAGAAAATTCAGTAAGTCTATTCGATTGTC-------------------------------------------TGGTTAAC-------------------------------AAAATG-----------------------------------GCT--TATTCCTT------------------------------------TTATTATTTGTC-ATCCACAGCTCGTCAAACTAGTAATTGACAACCAAACAGGGCGCCTGAAGTCGGTTGA
droEle1	scf7180000491186:1612403-1612564 -		CAATTAAAATGAG-----------AGAAAATAATGAT------CC---CGAGACTGTAGTAGAAAATTCAGTAAGTATAATTATTTGCC-------------------------------------------AGATAACA-------------------------------AAGGTG-----------------------------------TATATTAT-T---------------------------------------CTAAACTTTTTA-ATTAACAGCTTGTTAAACTGGTAATTGACAACAAAACAGGACGCTTGAAATCTGTTGA
droRho1	scf7180000779312:58257-58416 +		AGATAAGCCCCCG-----------AGAAATCGATGAG------TC---AGAGACTGTGGTAGAAAATTCAGTAAGTCTATTTGTTTGCC-------------------------------------------TGATAACA-------------------------------GGAATG-----------------------------------TAT--TAT-T---------------------------------------TTAAATTGTTTA-ATCCGCAGCTTGTTAAACTGGTGATTGAAAACAAAACCGGACGCTTGAAGTTGGTTGA
droFic1	scf7180000454102:274023-274184 +		TAATTAACCCTCG-----------AGAAAGTGATGAT------TC---TGAAACTGTTGTAGAAAGTTCGGTAAGTTTGTATTGAAAAA-------------------------------------------TTGTTAAG-------------------------------AAAATG----------------------------------ATTA--TATTT---------------------------------------TAAAACTATTTT-ACCCACAGCTCATTAAACTGGTGATTGACAACCAAACAGGTCGCTTGAAGACGATTGA
droKik1	scf7180000301476:15109-15270 -		AGAGCGATGCTGG-----------GACCCATGATGAT------GG---GGAGACGGTTGTGCAGACTTCGGTAAGGCCCAAGTCA--AC-----------------------------------TATT----TAAAATAA-------------------------------CTCTTC-----------------------------------TTC--CATCT---------------------------------------ATATAATATC-T-CCAATCAGCTTATCAAACTGGTGATCGATAACAACTCAGGACGTTTGAAGACCGTTGA
droAna3	scaffold_12916:10405980-10406144 -		ATCCCGACA--GGACACTT----CCACCCACGATGAT------GG---GGAGACTGTAGTGCAGACTTCGGTGAGTCCCTTAATCTTTC-------------------------------------------CA-AAGTA-------------------------------TTATTG-----------------------------------TTA--TTTAA------------------------------CTAACACCC------T---CT-TTCATTAGCAAATCAAACTGGTGATTGATAACCAAACCGGTCGCTTGAAGACCGTTGA
droBip1	scf7180000396572:77663-77819 -		ACCAAATTTCCAC-----------CCAC---GATGAT------GG---GGAAACTGTGGTGCAGACTTCGGTGAGTCTCTTTCTCTTCC-------------------------------------------CAGTAGTG-------------------------------TAT-AG-----------------------------------TTT--TTCAA------------------------------CCAACACTT------T---CT-TTCATTAGAAAATCAAACTGGTGATTGACAACCAAACAGGCCGTTTGAAGACGGTGGA
dp5	4_group5:880577-880738 +		AGGTTGAACCGCA-----------TGCA---GAGGAT------TC---CGATACTGTAGTTCAAAATTCGGTAAGCTTCAGTAGCTCTC-------------------------------------------AGATAGTTTTAG---------------------------AT--------------------------------------------CGTACCTG-----------------------CAAATCTTAACCA------T---AA-TTCCACAGCTCATCAAATTGGTGATAGACAACAAATCGGGCCGCTTGAGGACTGTTGA
droPer2	scaffold_5:5287496-5287657 +		AGGTTGAACCGCA-----------TGCA---GAGGAT------TC---CGATACTGTAGTTCAAAATTCGGTAAGCTTCAGTAGCTCTC-------------------------------------------AGATAGTTTTAG---------------------------AT--------------------------------------------CGTACCTG-----------------------CAAATCTTAACCA------T---AA-TTCCACAGCTCATCAAATTGGTGATAGACAACAAATCGGGCCGCTTGAGGACTGTTGA
droWil2	scf2_1100000004585:62419-62584 +		ATGTTGAGACTTA-----------CGATGATGATGAC------TCTGGTGAGACTGTCGTGCAGAATTCGGTAAGTTGTTATGCTTT-A---------------------------------------AATTCCATCAAT-------------------------------TGAACG-----------------------------------TTT--CCT-A---------------------------------------ACAATATTTTTA-ACAAACAGCTTATCAAATTGGTGATCGATAACAGCTCTGGCCGTTTGAAGACTATCGA
droVir3	scaffold_13049:13945006-13945260 -	dvi_19907	AAAGCTGTCCAAGACGCAACCCACGGCT---GATGATGACGAAACAGATGAGTTTACTGTTCAGAACTCGGTAAGTAACAGAAAGACAGAGAGACTTACATGGAACAGGGCACGAGAACGAAACCATT----TAGAATAT-------------------------------AATATG-----------------------------------TTC--CTGATC-AAGAAAATATAACGAACAGAATCGCCTGGCTTTACCGATCTTCCATTTC-GATTGCAGCATATCAAGCTTGTCTTCGGCAAAAGCAGCGGTCACCTTAAATCAGTCGA
droMoj3	scaffold_6680:13378593-13378691 +		ATATAATATAACA-----------TATA----------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------TTA--TATAT------------------------------ATATGA------CTCTTGCCC-ACTTGCAGCAAATCAAGCTGACATTCGTCAAGAGCACTGGACACCTTAAAACGATCGA
droGri2	scaffold_15110:15294709-15294950 +		TGCATTCGA--TGATGCAGGCAATGTCCAATGATGATGCGGAATCGGATGAATTTATTATACAGAATTCGGTAAGGGAACATTTTAAAA------------------------------------------TTGATAATC----AAGACACAACCCAAACAGTTTGGTAATAAACTGATAGATGACTTTGATAGATAACACTATACATAAATATC--TATTG---------------------------------------ACAAACAATTTC-CTTTACAGCTAATCAAGCTTACGTTCGACAAGACAAGCGGACACCTAAAGACTGTGCA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droYak3

AGATTGATCCCAG-----------AGAAGATGAAAGT------TC---AGAGACTGTAGTAGAAAACTCGGTAAGTGCCTTTCATTATC-------------------------------------------TAATAACA-------------------------------AAAATG-----------------------------------TGT--TATAA---------------------------------------TTTAGATTTATA-ACCCACAGCTCGTTAAACTGGTGATTGACAACCAAACAGGACGATTGAAGTCGGTCGA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.....GATCCCAG-----------AGAAGATGAAAGT------T................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................GATGAAAGT------TC---AGAGACTGTAGTAGAAA...........................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................A-------------------------------AAAATG-----------------------------------TGT--TATAA---------------------------------------TTT....................................................................	18	2	1.00	2	0	2	0	0	0	0	0	0	0	0	0
.........................GAAGATGAAAGT------TC---AGAGACT.....................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEre2

AGATAAGCCCCGG-----------GGAAGATGGAAAT------TC---AGAGACTGTAGTGGAAAACTCAGTGAGTGCCCTCAATTGTC-------------------------------------------TAATAACG-------------------------------AAAACG-----------------------------------TTG--TATAC---------------------------------------CTTCGATAAATA-ACCCGCAGCTTGTCAAACTAGTGATTGACAACCAAACAGGACGATTGAAGTCCGTCGA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.................................AAAT------TC---AGAGACTGTAGTGGAAAACT........................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0

droSec2

ATGCTGAGACCTA-----------------CGATGAC------GG---AGAGACGATTGTGCAGACATCGGTAAGTGCCA--AACTGTT-------------------------------------------TAATAGTG-------------------------------GAAACA-----------------------------------CCT--CTTCC---------------------------------------TAACTATTTAAAATCCATTAGCTGATCAAGTTGGTGCTGGACAACAAAACCGGCCTCTTGAAGAGGGTTGA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

droSim2

AGATTAATCCCAG-----------AGAAGATGAAAAT------TC---AGAGACTGTTGTAGAAAACTCGGTAAGTGCCTTTGATTGTC-------------------------------------------TAATAACT-------------------------------TAAATG-----------------------------------TTT--TATCC---------------------------------------CTAAGATATATA-ACCCATAGGTTGTTAAACTAGTGATGGACAACCATACAGGACGATTGAAGTCGGTCGA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...................................AT------TC---AGAGACTGTTGTAGAAA...........................................................................................................................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................AAACTAGTGATGGACAACC.........................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................GATGGACAACCATACAGG..................	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
............................................C---AGAGACTGTTGTAGT.............................................................................................................................................................................................................................................................................	16	3	0.67	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0

dm3

AGATTAATCCCAG-----------AGAAGATAACAAT------TC---AGAGACTGTTGTAGAAAACTCGGTAAGTGCATTTGATTGTC-------------------------------------------TAATAACT-------------------------------TAAATG-----------------------------------TTTTTTATCC---------------------------------------CTACGATATATA-ACCCATAGGTTGTTAAACTAGTGATGGACAACCATACAGGACGATTGAAGTCGGTCGA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...................................AT------TC---AGAGACTGTTGTAGAAAA..........................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................ACCATACAGGACGATTGAATC.......	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................CAAT------TC---AGAGACTGTTGT................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEug1

AGATTAGCCCCCG-----------AGAAATTGAAGGT------TC---TGAGACTGTAGTAGAGAATTCTGTAAGTTCTTAAGTAAATA-------------------------------------------TATATTAA-------------------------------AAAATC-----------------------------------TTT--TATTT---------------------------------------ATAAAATATTTA-ATCCGCAGCTTGTAAAACTGGTGATTGACAACCAAACAGGACGCTTGAAGTCAGTTGA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AGATTGCCCAGCG-----------AGAAAATGATAGC------TC---CGAGACTGTAGTTGAAAATTCAGTAAGTCTATATTTATAAG----------------------------------------------TGGTG-------------------------------AAAATA----------------------------------GGCT--AGTTT---------------------------------------ATAAAAAATCTC-ACCCACAGCTAGTCAAACTGGTAATTGACAACAACACAGGACGCTTAAAGTCGGTTGA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AGCTTAGCCAGCG-----------GGAAATTGATAGT------TC---CGAGACCGTAGTAGAAAATTCAGTAAGTCTATTCGATTGTC-------------------------------------------TGGTTAAC-------------------------------AAAATG-----------------------------------GCT--TATTCCTT------------------------------------TTATTATTTGTC-ATCCACAGCTCGTCAAACTAGTAATTGACAACCAAACAGGGCGCCTGAAGTCGGTTGA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CAATTAAAATGAG-----------AGAAAATAATGAT------CC---CGAGACTGTAGTAGAAAATTCAGTAAGTATAATTATTTGCC-------------------------------------------AGATAACA-------------------------------AAGGTG-----------------------------------TATATTAT-T---------------------------------------CTAAACTTTTTA-ATTAACAGCTTGTTAAACTGGTAATTGACAACAAAACAGGACGCTTGAAATCTGTTGA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AGATAAGCCCCCG-----------AGAAATCGATGAG------TC---AGAGACTGTGGTAGAAAATTCAGTAAGTCTATTTGTTTGCC-------------------------------------------TGATAACA-------------------------------GGAATG-----------------------------------TAT--TAT-T---------------------------------------TTAAATTGTTTA-ATCCGCAGCTTGTTAAACTGGTGATTGAAAACAAAACCGGACGCTTGAAGTTGGTTGA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TAATTAACCCTCG-----------AGAAAGTGATGAT------TC---TGAAACTGTTGTAGAAAGTTCGGTAAGTTTGTATTGAAAAA-------------------------------------------TTGTTAAG-------------------------------AAAATG----------------------------------ATTA--TATTT---------------------------------------TAAAACTATTTT-ACCCACAGCTCATTAAACTGGTGATTGACAACCAAACAGGTCGCTTGAAGACGATTGA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AGAGCGATGCTGG-----------GACCCATGATGAT------GG---GGAGACGGTTGTGCAGACTTCGGTAAGGCCCAAGTCA--AC-----------------------------------TATT----TAAAATAA-------------------------------CTCTTC-----------------------------------TTC--CATCT---------------------------------------ATATAATATC-T-CCAATCAGCTTATCAAACTGGTGATCGATAACAACTCAGGACGTTTGAAGACCGTTGA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

ATCCCGACA--GGACACTT----CCACCCACGATGAT------GG---GGAGACTGTAGTGCAGACTTCGGTGAGTCCCTTAATCTTTC-------------------------------------------CA-AAGTA-------------------------------TTATTG-----------------------------------TTA--TTTAA------------------------------CTAACACCC------T---CT-TTCATTAGCAAATCAAACTGGTGATTGATAACCAAACCGGTCGCTTGAAGACCGTTGA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.............................ACGATGAT------GG---GGAGACTGTAGTGC..............................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
............GACACTT----CCACCCACGATGAT------GG---GGAGAC......................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0

droBip1

ACCAAATTTCCAC-----------CCAC---GATGAT------GG---GGAAACTGTGGTGCAGACTTCGGTGAGTCTCTTTCTCTTCC-------------------------------------------CAGTAGTG-------------------------------TAT-AG-----------------------------------TTT--TTCAA------------------------------CCAACACTT------T---CT-TTCATTAGAAAATCAAACTGGTGATTGACAACCAAACAGGCCGTTTGAAGACGGTGGA	Size	Hit Count	Total Norm	Total
No Reads

dp5

AGGTTGAACCGCA-----------TGCA---GAGGAT------TC---CGATACTGTAGTTCAAAATTCGGTAAGCTTCAGTAGCTCTC-------------------------------------------AGATAGTTTTAG---------------------------AT--------------------------------------------CGTACCTG-----------------------CAAATCTTAACCA------T---AA-TTCCACAGCTCATCAAATTGGTGATAGACAACAAATCGGGCCGCTTGAGGACTGTTGA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................AACAAATCGGGCCGCTTGAGGACT.....	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................AGACAACAAATCGGGCCGCTT............	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

AGGTTGAACCGCA-----------TGCA---GAGGAT------TC---CGATACTGTAGTTCAAAATTCGGTAAGCTTCAGTAGCTCTC-------------------------------------------AGATAGTTTTAG---------------------------AT--------------------------------------------CGTACCTG-----------------------CAAATCTTAACCA------T---AA-TTCCACAGCTCATCAAATTGGTGATAGACAACAAATCGGGCCGCTTGAGGACTGTTGA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..................................GAT------TC---CGATACTGTAGTTCAAA...........................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
...................................................................................................................................................................................................................................................................................................................AATCGGGCCGCTTGAGGACT.....	20	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AAATCGGGCCGCTTGAGGACT.....	21	1	1.00	1	0	1	0	0	0	0
......AACCGCA-----------TGCA---GAGGAT------TC---CGA.........................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
..GTTGAACCGCA-----------TGCA---GAGG.........................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
..............................................................................................................................................................................................................................................................................................................CAACAAATCGGGCCGCTTGAG.........	21	1	1.00	1	0	0	0	0	0	1

droWil2

ATGTTGAGACTTA-----------CGATGATGATGAC------TCTGGTGAGACTGTCGTGCAGAATTCGGTAAGTTGTTATGCTTT-A---------------------------------------AATTCCATCAAT-------------------------------TGAACG-----------------------------------TTT--CCT-A---------------------------------------ACAATATTTTTA-ACAAACAGCTTATCAAATTGGTGATCGATAACAGCTCTGGCCGTTTGAAGACTATCGA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..............................................GGTGAGACTGTCGTGCAGA...........................................................................................................................................................................................................................................................................	19	1	7.00	7	0	0	4	3	0
............................................CTGGTGAGACTGTCGTGCAG............................................................................................................................................................................................................................................................................	20	1	4.00	4	1	0	1	2	0
............................................CTGGTGAGACTGTCGTGCAGAATTCGC.....................................................................................................................................................................................................................................................................	27	1	4.00	4	3	0	0	1	0
.........CTTA-----------CGATGATGATGAC------TCTGGT...........................................................................................................................................................................................................................................................................................	23	1	4.00	4	0	0	1	3	0
....................................................................................................................................................................................................................................................................................................................CTCTGGCCGTTTGAAGAC......	18	1	4.00	4	3	0	0	1	0
................................................................................................................................................................................................................................................................................................................ACAGCTCTGGCCGTTTGAAGACT.....	23	1	4.00	4	1	0	1	2	0
...........................................TCTGGTGAGACTGTCGTGCAGA...........................................................................................................................................................................................................................................................................	22	1	3.00	3	0	0	2	1	0
...........................................................................................................................................................................................................................................................................................................CGATAACAGCTCTGGCCGTT.............	20	1	3.00	3	0	0	2	1	0
........................................................................................................................................................................................................................................................................................................GATCGATAACAGCTCTGGCCGT..............	22	1	3.00	3	0	1	2	0	0
............................................................................................................................................................................................................................................................................................TATCAAATTGGTGATCGATA............................	20	1	3.00	3	0	0	0	3	0
.........................GATGATGATGAC------TCTGGTGAGACTGT...................................................................................................................................................................................................................................................................................	26	1	3.00	3	0	0	2	1	0
..................................................................................................................................................................................................................................................................................................................AGCTCTGGCCGTTTGAAGAC......	20	1	2.00	2	0	0	0	2	0
................................................................................................................................................................................................................................................................................................................ACAGCTCTGGCCGTTTGAAGAC......	22	1	2.00	2	0	0	1	1	0
....................................................................................................................................................................................................................................................................................................................CTCTGGCCGTTTGAAGACTATC..	22	1	2.00	2	2	0	0	0	0
.....................................................................................................................................................................................................................................................................................................GGTGATCGATAACAGCTCTGGCCGT..............	25	1	2.00	2	0	0	2	0	0
.........CTTA-----------CGATGATGATGAC------TCTGGTGA.........................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	1	1	0
....................................C------TCTGGTGAGACTGTCGTGCA.............................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	2	0	0
..................................GAC------TCTGGTGAGACTGTCGTGCAGA...........................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	2	0	0
.........................................................................................................................................................................................................................................................................................................ATCGATAACAGCTCTGGCCGT..............	21	1	2.00	2	0	1	1	0	0
...............................................GTGAGACTGTCGTGCAGAATT........................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	2	0	0
..............................................GGTGAGACTGTCGTGCAG............................................................................................................................................................................................................................................................................	18	1	2.00	2	0	0	1	1	0
....................................C------TCTGGTGAGACTGTCGTGCAGAATTCGC.....................................................................................................................................................................................................................................................................	29	1	2.00	2	2	0	0	0	0
............................................................................................................................................................................................................................................................................................TATCAAATTGGTGATCGAT.............................	19	1	2.00	2	2	0	0	0	0
....................................C------TCTGGTGAGACTGTCGTGC..............................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	1	1	0
............................................CTGGTGAGACTGTCGTGCAGA...........................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	1	1	0
....TGAGACTTA-----------CGATGATGATGAC------T................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	1	1	0
..GTTGAGACTTA-----------CGATGATGAT..........................................................................................................................................................................................................................................................................................................	21	1	2.00	2	2	0	0	0	0
..........................ATGATGATGAC------TCTGGTGAGACTGT...................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	2	0	0
............................GATGATGAC------TCTGGTGAGACTGT...................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	2	0	0
............................GATGATGAC------TCTGGTGAGACTGTC..................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	2	0
...............................GATGAC------TCTGGTGAGACTGTCGTGCA.............................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................ATCGATAACAGCTCTGGCCGTTT............	23	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................TATCAAATTGGTGATCGATAAC..........................	22	1	1.00	1	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................TTGGTGATCGATAACAGCTCTGGCCG...............	26	1	1.00	1	0	0	1	0	0
.........CTTA-----------CGATGATGATGAC------TCTG.............................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................GCTCTGGCCGTTTGAAGACTATC..	23	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................GCTCTGGCCGTTTGAAGACTATCGA	25	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................GCTTATCAAATTGGTGATC................................	19	1	1.00	1	0	0	0	1	0
.TGTTGAGACTTA-----------CGATGATGAT..........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0
.........CTTA-----------CGATGATGATGAC------TCTGG............................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0
......AGACTTA-----------CGATGATGATGA........................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................ATTGGTGATCGATAACAGCTCTGGCC................	26	1	1.00	1	1	0	0	0	0
...............................GATGAC------TCTGGTGAGACTGTC..................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
............................................................................................................................................................................................................................................................................................................GATAACAGCTCTGGCCGT..............	18	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................................................................................................................AAATTGGTGATCGATAACAGCTCTGGCC................	28	1	1.00	1	1	0	0	0	0
...........TA-----------CGATGATGATGAC------TCTGGTGAGACTGT...................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0
............................................................................................................................................................................................................................................................................................TATCAAATTGGTGATCGATAACAGC.......................	25	1	1.00	1	0	0	1	0	0
.............................................TGGTGAGACTGTCGTGCAGA...........................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
...........TA-----------CGATGATGATGAC------TCTGGT...........................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................ATTGGTGATCGATAACAGCTCTG...................	23	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................CGATAACAGCTCTGGCCGT..............	19	1	1.00	1	0	0	1	0	0
...........TA-----------CGATGATGATGAC------TCTGGTGAGACT.....................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0
.................................................GAGACTGTCGTGCAGAATTCG......................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
...............................................GTGAGACTGTCGTGCAGAATTCG......................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0
......................................................................................................................................................................................................................................................................................................................CTGGCCGTTTGAAGACTATC..	20	1	1.00	1	0	0	0	1	0
.............................ATGATGAC------TCTGGTGAGACTGTCGTGC..............................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................CTCTGGCCGTTTGAAGACT.....	19	1	1.00	1	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................TTGGTGATCGATAACAGCT......................	19	1	1.00	1	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................AACAGCTCTGGCCGTTTGAA.........	20	1	1.00	1	0	0	1	0	0
...................................AC------TCTGGTGAGACTGTCGTGCAGA...........................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0
............................GATGATGAC------TCTGGTGAGACT.....................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
............................GATGATGAC------TCTGGTGAG........................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................ACAGCTCTGGCCGTTTGAAGA.......	21	1	1.00	1	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................GGTGATCGATAACAGCTCTGGCC................	23	1	1.00	1	0	0	0	1	0
..........................ATGATGATGAC------TCTGGTGAGACT.....................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................TCAAATTGGTGATCGATAACAGCT......................	24	1	1.00	1	1	0	0	0	0
..GTTGAGACTTA-----------CGATGAT.............................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
.........CTTA-----------CGATGATGATGAC------TCT..............................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................ATCGATAACAGCTCTGGCCG...............	20	1	1.00	1	0	0	0	1	0
..........TTA-----------CGATGATGATGAC------TCTGGT...........................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................ACAGCTCTGGCCGTTTGA..........	18	1	1.00	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................AATTGGTGATCGATAACAGCTCTGGCC................	27	1	1.00	1	1	0	0	0	0
..........................ATGATGATGAC------TCTGGTGAGACTGTCGT................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................AGCTCTGGCCGTTTGAAGA.......	19	1	1.00	1	0	0	0	1	0
............................................................GCAGAATTCGGTAAGTTG..............................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................................................................................................................................ACAGCTCTGGCCGTTTGAAGACTATCG.	27	1	1.00	1	0	0	1	0	0
...............................................GTGAGACTGTCGTGCAGA...........................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0
..............................................GGTGAGACTGTCGTGCAGAATTCG......................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................................................................................................................................ACAGCTCTGGCCGTTTGAAG........	20	1	1.00	1	0	0	0	1	0
............A-----------CGATGATGATGAC------TCTGGTGAGACTGT...................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0
......AGACTTA-----------CGATGATGATGAC------TCTGGT...........................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
.............................................TGGTGAGACTGTCGTGCA.............................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
..GTTGAGACTTA-----------CGATGATGATGA........................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
...............................GATGAC------TCTGGTGAGACTGTCGTGC..............................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0
..............................................GGTGAGACTGTCGTGCAGAAT.........................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................TTGGTGATCGATAACAGCTCTGGCC................	25	1	1.00	1	1	0	0	0	0
...TTGAGACTTA-----------CGATGATGAT..........................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
.........................GATGATGATGAC------TCTGGTGAGACTGTC..................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................AATTGGTGATCGATAACAGCTCT....................	23	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................TCTGGCCGTTTGAAGACTATCGA	23	1	1.00	1	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................GCTCTGGCCGTTTGAAGACT.....	20	1	1.00	1	0	0	1	0	0
..........................ATGATGATGAC------TCTGGTGAGACTGTC..................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
.........CTTA-----------CGATGATGATGAC------T................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................GGTGATCGATAACAGCTCTGGCCG...............	24	1	1.00	1	0	0	0	1	0
...............................GATGAC------TCTGGTGAGACTGTCGTGCAGA...........................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0
..................................................AGACTGTCGTGCAGAATTCGC.....................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
...........TA-----------CGATGATGATGAC------TCTGGTGAGA.......................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................CAAATTGGTGATCGATAACAGCTCTGGC.................	28	1	1.00	1	1	0	0	0	0
........................CGATGATGATGAC------TCTGGT...........................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
..........................ATGATGATGAC------TCTGGTGAGACTGTCGTG...............................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................ATTGGTGATCGATAACAGCT......................	20	1	1.00	1	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................GCTTATCAAATTGGTGATCG...............................	20	1	1.00	1	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................TCAAATTGGTGATCGATAACAG........................	22	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................................................................................................AAATTGGTGATCGATAACAGCTCTGGC.................	27	1	1.00	1	0	0	0	1	0
.......GACTTA-----------CGATGATGATGAC------TCTGGT...........................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
ATGTTGAGACTTA-----------CGATGATGATGAC------.................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................ATCAAATTGGTGATCGATA............................	19	2	0.50	1	0	0	0	1	0

droVir3

AAAGCTGTCCAAGACGCAACCCACGGCT---GATGATGACGAAACAGATGAGTTTACTGTTCAGAACTCGGTAAGTAACAGAAAGACAGAGAGACTTACATGGAACAGGGCACGAGAACGAAACCATT----TAGAATAT-------------------------------AATATG-----------------------------------TTC--CTGATC-AAGAAAATATAACGAACAGAATCGCCTGGCTTTACCGATCTTCCATTTC-GATTGCAGCATATCAAGCTTGTCTTCGGCAAAAGCAGCGGTCACCTTAAATCAGTCGA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...............................GATGATGACGAAACAGATGAGT.......................................................................................................................................................................................................................................................................................	22	1	4.00	4	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................AACCCACGGCT---GATGATGA.....................................................................................................................................................................................................................................................................................................	19	1	3.00	3	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................GATGACGAAACAGATGAGT.......................................................................................................................................................................................................................................................................................	19	1	3.00	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0
.....................CACGGCT---GATGATGACGAAAC...............................................................................................................................................................................................................................................................................................	21	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................CAACCCACGGCT---GATGATGACG...................................................................................................................................................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0
.................AACCCACGGCT---GATGATGACGAAAC...............................................................................................................................................................................................................................................................................................	25	1	3.00	3	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....CTGTCCAAGACGCAACCCACGG..................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................T---GATGATGACGAAACAGATGA.........................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................ATCAAGCTTGTCTTCGGCAAAAGCAGC....................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
.................AACCCACGGCT---GATGATGACGAAACA..............................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............CGCAACCCACGGCT---GATGATGAC....................................................................................................................................................................................................................................................................................................	23	1	2.00	2	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................GATGACGAAACAGATGAGTTT.....................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
............GACGCAACCCACGGCT---GATGAT.......................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............CGCAACCCACGGCT---GATGATGACG...................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
................CAACCCACGGCT---GATGATGAC....................................................................................................................................................................................................................................................................................................	21	1	2.00	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..................................GATGACGAAACAGATGAGTTTACT..................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.............ACGCAACCCACGGCT---GATGATGAC....................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............CGCAACCCACGGCT---GATGATGACGAAAC...............................................................................................................................................................................................................................................................................................	28	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................T---GATGATGACGAAACAGATG..........................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
....................CCACGGCT---GATGATGACGAAAC...............................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..AGCTGTCCAAGACGCAACCCACGGCT---.............................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGCAGCGGTCACCTTAAAT.......	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................CCCACGGCT---GATGATGACGA..................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................................................................................................TATCAAGCTTGTCTTCGGCAAAAG........................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................CTTCGGCAAAAGCAGCGGT.................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................ACAGATGAGTTTACTGTTCAGAA..........................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........CAAGACGCAACCCACGGCT---GATGA........................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................CGGTCACCTTAAATCAGTCG.	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................GATGATGACGAAACAGATGAGTT......................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................AGATGAGTTTACTGTTCAGAACT........................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.................AACCCACGGCT---GATGATGACGAAA................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
......GTCCAAGACGCAACCCACGGC.................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................CAACCCACGGCT---GATGATGA.....................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................ATGATGACGAAACAGATG..........................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............GCAACCCACGGCT---GATGATGAC....................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....TGTCCAAGACGCAACCCACG...................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................AAAAGCAGCGGTCACCTTAAATCAGTC..	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................TTACCGATCTTCCATTTC-GATTGCAG..................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.................................TGATGACGAAACAGATGAGTTTAC...................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.............ACGCAACCCACGGCT---GATGATGACGAAAC...............................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............CGCAACCCACGGCT---GATGATGA.....................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AAACAGATGAGTTTACTGTTCAGAACT........................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................GAGTTTACTGTTCAGAAC.........................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................AACCCACGGCT---GATGATGACGAA.................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..AGCTGTCCAAGACGCAACCCACG...................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................................................................................AAGCTTGTCTTCGGCAAAA.........................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................GATGATGACGAAACAGATGAGTTTAC...................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................CATATCAAGCTTGTCTTCGGC.............................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................GTCACCTTAAATCAGTCGA	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................ATGACGAAACAGATGAGTT......................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........CAAGACGCAACCCACGGCC---.............................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................CTTCGGCAAAAGCAGCGGTCACCTT...........	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................GATGAGTTTACTGTTCAGAACT........................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................TCGGCAAAAGCAGCGGTCACCT............	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......GTCCAAGACGCAACCCACGGCT---.............................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........CAAGACGCAACCCACGGC.................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...................CCCACGGCT---GATGATGACG...................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................AAGCAGCGGTCACCTTAAATC......	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........AGACGCAACCCACGGCT---GATGATGA.....................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................AAAGCAGCGGTCACCTTAAATC......	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................CTTCCATTTC-GATTGCAGC.................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..........................................AACAGATGAGTTTACTGTTCAGAACT........................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................CGGCT---GATGATGACGAAACA..............................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................GGCT---GATGATGACGAAACAGATGAGTT......................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................AGTTTACTGTTCAGAACTCGC.....................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........AGACGCAACCCACGGCT---GAT..........................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............GCAACCCACGGCT---GATGAT.......................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................AGATGAGTTTACTGTTCAG............................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................AGCTTGTCTTCGGCAAAAGCAGCGGTC................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................ATATCAAGCTTGTCTTCGGCA............................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................CCACGGCT---GATGATGACGAAACAGATG..........................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................GACGAAACAGATGAGTTTACT..................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.AAGCTGTCCAAGACGCAACCCACGGCT---.............................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AACAGATGAGTTTACTGTTCAGAACTCGC.....................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................TGTCTTCGGCAAAAGCAGCGGTCACCT............	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............GACGCAACCCACGGCT---GATGATG......................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........CAAGACGCAACCCACGGCT---GAT..........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................TGATGACGAAACAGATGAGT.......................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...............................GATGATGACGAAACAGATGAGTTTACT..................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................GACGAAACAGATGAGTTTACTGTTC..............................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.................AACCCACGGCT---GATGATGAC....................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................GATGATGACGAAACAGATGAGTTTACTG.................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................AAAAGCAGCGGTCACCTTAAATCAGTCGA	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................GCAGCGGTCACCTTAAAT.......	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................CTTGTCTTCGGCAAAAGCAGCGGTCAC..............	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..........................CT---GATGATGACGAAACAGATGAGT.......................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................AGATGAGTTTACTGTTCAGAACTC.......................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................TGATGACGAAACAGATGAG........................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................GCAAAAGCAGCGGTCACC.............	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............CGCAACCCACGGCT---GATGATGACGAA.................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.......................................CGAAACAGATGAGTTTACTGTTCA.............................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................CCACGGCT---GATGATGACG...................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................CCACGGCT---GATGATGACGAAACAGAT...........................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................CACGGCT---GATGATGACGAAA................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACCCACGGCT---GATGATGACGA..................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................CAGATGAGTTTACTGTTCAG............................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................TTACCGATCTTCCATTTC-GAT.......................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..................................GATGACGAAACAGATGAGTTTACTGTTC..............................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................GATGATGACGAAACAGATG..........................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................GACGAAACAGATGAGTTTACTGT................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................TGTCTTCGGCAAAAGCAGCGGTCACC.............	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................AGATGAGTTTACTGTTCAGAAC.........................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................ATCAAGCTTGTCTTCGGCAAAA.........................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACCCACGGCT---GATGATGACGAAAC...............................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................GACGAAACAGATGAGTTTA....................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACCCACGGCT---GATGATGAC....................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AACAGATGAGTTTACTGTTCAG............................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................ATATCAAGCTTGTCTTCGGC.............................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................CTTACATGGAACAGGGCAC...........................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................GTTTACTGTTCAGAACTCGC.....................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................TTACTGTTCAGAACTCGCAT...................................................................................................................................................................................................................................................................	20	7	0.29	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ATATAATATAACA-----------TATA----------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------TTA--TATAT------------------------------ATATGA------CTCTTGCCC-ACTTGCAGCAAATCAAGCTGACATTCGTCAAGAGCACTGGACACCTTAAAACGATCGA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...........................................................................................................................................................................................................................................................................................AAATCAAGCTGACATTCGTCAAGAGC.......................	26	1	3.00	3	2	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................AAATCAAGCTGACATTCGT..............................	19	1	2.00	2	1	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................AAATCAAGCTGACATTCGTCAAGAGCA......................	27	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................ACTGGACACCTTAAAACGAT...	20	1	2.00	2	2	0	0	0	0	0
............................................................................................................................................................................................................................................................................................AATCAAGCTGACATTCGTCAAGAGCA......................	26	1	2.00	2	2	0	0	0	0	0
............................................................................................................................................................................................................................................................................................AATCAAGCTGACATTCGTC.............................	19	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................CAAATCAAGCTGACATTCGTCAAGAGCA......................	28	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................AAGCTGACATTCGTCAAGAG........................	20	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................GTCAAGAGCACTGGACACCTT...........	21	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................CAAATCAAGCTGACATTCGTC.............................	21	1	1.00	1	0	0	0	0	0	1
..................................................................................................................................................................................................................................................................................................GCTGACATTCGTCAAGAGCA......................	20	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................ACTGGACACCTTAAAACGATC..	21	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................CACTGGACACCTTAAAACGATCGA	24	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................CAAATCAAGCTGACATTCGT..............................	20	1	1.00	1	0	0	0	0	0	1
..............................................................................................................................................................................................................................................................................................................CAAGAGCACTGGACACCTTAAAA.......	23	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................AAATCAAGCTGACATTCGTCAAGAG........................	25	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................CAAATCAAGCTGACATTCGTCAAGAGCAC.....................	29	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................TTCGTCAAGAGCACTGGA.................	18	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................ATCAAGCTGACATTCGTCAAGAGCA......................	25	1	1.00	1	1	0	0	0	0	0

droGri2

TGCATTCGA--TGATGCAGGCAATGTCCAATGATGATGCGGAATCGGATGAATTTATTATACAGAATTCGGTAAGGGAACATTTTAAAA------------------------------------------TTGATAATC----AAGACACAACCCAAACAGTTTGGTAATAAACTGATAGATGACTTTGATAGATAACACTATACATAAATATC--TATTG---------------------------------------ACAAACAATTTC-CTTTACAGCTAATCAAGCTTACGTTCGACAAGACAAGCGGACACCTAAAGACTGTGCA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
................................................................................................................................................................................................................................................................................................AAGCTTACGTTCGACAAGACA.......................	21	1	1.00	1	1	0
..........................CCAATGATGATGCGGAATCGGATG..........................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0
...........................CAATGATGATGCGGAATCGGAT...........................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0

dya_295

2L:11413750-11413810 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-6.2	-6.2	-6.0