ID:

dya_29

 Coordinate:

2L:13552286-13552347 -

 Confidence:

Known Ortholog

 Class:

Testes-restricted

 Genomic Locale:

antisense_to_intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.7 -30.1 -30.1

Flybase annnotation

Antisense to intron [Dyak\GE18984-in]; utr5 [utr5_plus_808]; utr5 [utr5_plus_809]

No Repeatable elements found

Sense Strand Reads

TGCCCAGTGGATCCCGCGAGTTAAATTGATTTTAACTTTGTTCTATATTCTTAGTACTCGGGTTGACAAAGACCTTTCCTTGCGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCAAGGATCATCGCTTCGCCCGCGTGTTTTGT

***********************************(((((..((((((((.((((((((....((((((((.((.........))...))))))))....)))))))).)).))))))..))))).************************************ 		Read size # Mismatch Hit Count Total Norm Total V120

male body		 M026

head

 M043

female body

 SRR1275484

Male prepupae		 SRR1275488

Male larvae		 V052

head

 V058

head

 M056

embryo

 V046

embryo
..........................................................................................TTGTCATCGGGGGTATTATGA................................................... 21 0 1 289.00 289 263 8 5 5 2 1 2 2 1
..................................................TTAGTACTCGGGTTGACAAAG........................................................................................... 21 0 1 179.00 179 175 0 3 1 0 0 0 0 0
..................................................TTAGTACTCGGGTTGACAAAGA.......................................................................................... 22 0 1 164.00 164 156 2 4 1 0 0 0 1 0
.................................................CTTAGTACTCGGGTTGACAAA............................................................................................ 21 0 1 104.00 104 96 5 2 0 0 0 0 1 0
.................................................CTTAGTACTCGGGTTGACAAAG........................................................................................... 22 0 1 96.00 96 92 1 1 0 1 0 0 1 0
..........................................................................................TTGTCATCGGGGGTATTATG.................................................... 20 0 1 86.00 86 77 1 5 0 0 2 1 0 0
...........................................................................................TGTCATCGGGGGTATTATGA................................................... 20 0 1 75.00 75 68 3 4 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGTATTATGAA.................................................. 22 0 1 41.00 41 22 9 1 6 2 1 0 0 0
..........................................................................................TTGTCATCGGGGGTATTATGAAA................................................. 23 0 1 31.00 31 17 10 0 1 2 0 1 0 0
.................................................CTTAGTACTCGGGTTGACAA............................................................................................. 20 0 1 31.00 31 23 5 3 0 0 0 0 0 0
..................................................TTAGTACTCGGGTTGACAAA............................................................................................ 20 0 1 30.00 30 29 1 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGTTGACA.............................................................................................. 19 0 1 26.00 26 17 3 5 0 0 1 0 0 0
................................................TCTTAGTACTCGGGTTGACA.............................................................................................. 20 0 1 20.00 20 16 3 1 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGTATTAT..................................................... 19 0 1 18.00 18 4 10 4 0 0 0 0 0 0
.........................................................................................TTTGTCATCGGGGGTATTATGA................................................... 22 0 1 14.00 14 12 2 0 0 0 0 0 0 0
................................................TCTTAGTACTCGGGTTGACAAA............................................................................................ 22 0 1 13.00 13 13 0 0 0 0 0 0 0 0
...........................................................................................TGTCATCGGGGGTATTATG.................................................... 19 0 1 9.00 9 8 0 1 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGTATTATGT................................................... 21 1 1 8.00 8 4 1 3 0 0 0 0 0 0
...........................................................................................TGTCATCGGGGGTATTATGAA.................................................. 21 0 1 7.00 7 4 3 0 0 0 0 0 0 0
................................................TCTTAGTACTCGGGTTGACAA............................................................................................. 21 0 1 6.00 6 2 4 0 0 0 0 0 0 0
..................................................TTAGTACTCGGGTTGACAAAGT.......................................................................................... 22 1 1 5.00 5 4 0 0 0 0 1 0 0 0
..................................................TTAGTACTCGGGTTGACAA............................................................................................. 19 0 1 5.00 5 2 3 0 0 0 0 0 0 0
...........................................................................................TGTCATCGGGGGTATTATGAAA................................................. 22 0 1 4.00 4 2 1 0 1 0 0 0 0 0
..................................................TTAGTACTCGGGTTGACA.............................................................................................. 18 0 1 4.00 4 0 2 0 0 0 0 2 0 0
..................................................TTAGTACTCGGGTTGATAAAG........................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGCATTATGA................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGTTGACAAAA........................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0
.........................................................................................TTTGTCATCGGGGGTATTATG.................................................... 21 0 1 3.00 3 2 1 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGTTGAC............................................................................................... 18 0 1 3.00 3 0 3 0 0 0 0 0 0 0
..................................................TTAGTACTCGGGTTGACAAAA........................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0
.........................................................................................TTTGTCATCGGGGGTATTAT..................................................... 20 0 1 3.00 3 2 1 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGTATTATA.................................................... 20 1 1 3.00 3 1 1 1 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGGATTATGA................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0 0 0
...........................................................................................TGTCATCGGGGGTATTATGT................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGCTGACAAAG........................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGTATTA...................................................... 18 0 1 2.00 2 0 2 0 0 0 0 0 0 0
..................................................TTAGTACTCGGGCTGACAAA............................................................................................ 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGAATTATGA................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGTTGACAAAGT.......................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGAATTATGAAA................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0
..................................................TTAGTACTCGGGTTGATAAAGA.......................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGTTGACT.............................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGCTATTATGA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCAGGGGTATTATG.................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................TTGTCATCCGGGGTATTATG.................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGTTGACAAG............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTCGGGTTGAAAAAG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGCTGACAA............................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGCGTTGACAAAG........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TCGTCATCGGGGGTATTATGA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTTGGGTTGACAAAGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGTCGTCGGGGGTATTATG.................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................TGTCATCGGGGGTATTATGG................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................TGTCATCGGGGGAATTATG.................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGTTGACAAT............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTCCGGTTGACAAAG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TTTGTCATAGGGGGTATTATG.................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................TTGTCATAGGGGGTAGTATGA................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0
..........................................................................................TTGTCATCGTGGGTATTATGAA.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGTTCACAAAG........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TTTGTCATCGGGGGTATTATGAAA................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCTGGTTGACAAA............................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................TTAGTACTCGGGTTGACAAATA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGGCATCGGGGGGATTATGA................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGCCATCGGGGGTATTATG.................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................GTCATCGGGGGTATTATG.................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGTATTATGAAAT................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................TGTCATTGGGGGTATTATG.................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGACTTATGA................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGATGACAAA............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTCGGGTTGACAAAAA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTTTCATCGGGGGTATTATGA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................TGTCATCGGGGGTATTATGC................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTCGGGTTGACAAAGG.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................TCTTAGTACTCGGGTTGACAAAA........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTCGGCTTGACAAAGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................TTAGTACTTGGGTTGACAAAG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGGATTATGAAA................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................TAGTACTCGGGTTGACAAAG........................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
................................................TCTTAGTACTCGGGTTGAC............................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTCGTACTCGGGTTGACAAAG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TTTGTCATCGGGGGTATTATGAT.................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0
..........................................................................................TTGTCATCGGGGGTATTATT.................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.................................................CGTAGTACTCGGGCTGACAAA............................................................................................ 21 2 1 1.00 1 0 0 0 0 0 0 0 1 0
..................................................TTACTACTCGGGTTGACAAAGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................CTAGTACTCGGGTTGACAAAG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGTATTATGC................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTCGGGTTGACAAAGAA......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGTTGACAAAT........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGGATTATG.................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAATACTCGGGTTGACAA............................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGTATTATGTT.................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................TTGGCATCGGGGGTATTATGA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGCCATCGGGGGCATTATGA................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................TTCATCGGGGGTATTATGA................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................TTGCCATCGGGGGTATTATGA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTCGGGTTGACAT............................................................................................. 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGTATTATTA................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0
.................................................CTTAGTACTCTGGTTGACAAAG........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGTTGACAAAC........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGCTGACAAA............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTGGGGTTGACAAA............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGATGACA.............................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTATTACTCGGGTTGACAAAG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................ATCTTGTCATCGGGGGTATTATGA................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTCGGGTTAACAAAGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................GGTCATCGGGGGTATTATGA................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTCGGGTTGATAAA............................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGTTGACAAC............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGTATTATGG................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................TCTCATCGGGGGTATTATGAA.................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGTTAACAAA............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGTCTTATG.................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTCGGGTTGACCAAGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGTATTATGAAAA................................................ 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................TTGTCGTCGGGGGTATTATGA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................TTGTCATCGGGGGAATTATGAAAA................................................ 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................CTTAGTACTGGGGTTGACA.............................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................GTGTCATCGGGGGTATTATG.................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................CTGTCATCGGGGGTATTATGAA.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................CTTAGTACTCGGGTTGACAAAAT.......................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTCGGTTTGACAAAG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................GCTGAAGGGAACTGCAAGGA......................... 20 3 14 0.07 1 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

ACGGGTCACCTAGGGCGCTCAATTTAACTAAAATTGAAACAAGATATAAGAATCATGAGCCCAACTGTTTCTGGAAAGGAACGCCGCGGAAACAGTAGCCCCCATAATACTTTATATCGAGTTTCTTTGACGTTCCTAGTAGCGAAGCGGGCGCACAAAACA

************************************(((((..((((((((.((((((((....((((((((.((.........))...))))))))....)))))))).)).))))))..))))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droYak3 2L:13552236-13552397 - dya_29 confident TGCCCAGT---GGAT------------------------------------------------C------C----------------CGCG-AGTTAAATTGATTTT-------------------AACTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGACCTTTCCT----T--GCGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCAA-----------------------------------------------------------------------GGATCATCGC-------TTCGCCCGCGTGTTTTGT
droEre2 scaffold_4929:5729379-5729545 + der_33 confident CGACCAG---------------------------------------------------TGCAAATGGG-----------------GCCTCG-AGTTAAATTGATTTT-------------------AACTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGAGCTTTCCT----T--GCGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCAA-----------------------------------------------------------------------GGAGCAACGC-------ACCGCCCGCGTTTTTTGT
droSec2 scaffold_5:3718639-3718812 + dse_42 confident CGCCCAGT---G----------CAG---------------------------------TTCAAAATGTGCC----A--G----------CG-AATTAAATAGATTTT-------------------AACTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTTCT---TT--GCGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAGCTGCAA-----------------------------------------------------------------------GGATCATCGT-------ACCGCCCACGGGTTTTGT
droSim2 2l:5445651-5445824 + dsi-mir-959 Known_mirbase CGCCCAGT---G----------CAG---------------------------------TTCAAAATGTGCC----A--G----------CG-AATTAAATAGATTTT-------------------AACTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTTCT---TT--GCGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAGCTGCAA-----------------------------------------------------------------------GGATCATCGT-------CACGCCCACGGGTTTTGT
dm3 chr2L:5640879-5641071 + dme-mir-959 Known_mirbase TGCCCAGT---GGATGCTAAAGCAG---------------------------------TGCAAAATGTGCC----A--GCG-GGGGCCCCG-AATTAAATTGATTTT-------------------AACTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTTCT---TC--AGGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAACTGCAA-----------------------------------------------------------------------TGATTATCGT-------ACCGCCCACGGGTTTTGT
droEug1 scf7180000409063:317183-317380 + CCCCTAAC---CGATGC-AAAATAG---------------------------------TGGAAACTGTGCC----A--GAGAGGAGG-CCG-TGTAAAATTGATTTC-------------------AATTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGACCTTTCCT----T--GAGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCCG-----------------------------------------------------------------------AGCTCATCCTTCCTGCTACCTACCGCGATGTTTGT
droBia1 scf7180000302422:3830431-3830619 + CGCCTAACCGCCGATGC-AAAGTAG---------------------------------TGGAAAATGTGCC----A--GCCCCTGGGCTTA-TGTAAAATTAATTTC-------------------AATTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTGCA----T--TGGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAGACTGCAA-----------------------------------------------------------------CGCGAAGG-------------------ACCGTGAGCTTTGC
droTak1 scf7180000415871:385164-385356 + CGCCTAAC---CGATGC-AAAATAG---------------------------------TGGAAAATGTGCC----ACAGCCGGGAGGCTTA-TGTTAAATTCATTTC-------------------AATTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTT-CAT----C--GGGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCAA-----------------------------------------------------------------------GGCTCAGCAT-------GCCGACCTCGAGTTTTGT
droEle1 scf7180000490753:30073-30264 + CGCCTAGC---CGATGA-AAAGTAG---------------------------------TGCAAACTGTGCC----G--ACCCGGAGGCCCG-TGTTAAATTGATTTC-------------------AATTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGACCCTTCCT----C--GCGGCGGCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGGAA-----------------------------------------------------------------------GGTGTGCTGT-------GCCAATCGCGAGCTTTGT
droRho1 scf7180000778253:34050-34229 - CGCCTAAC---CGATGA-GAATTAG---------------------------------TGGAAACTGTGCC------------------CA-TGCTAGATGGATTTC-------------------AATGTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTCCT----T--GAGGCGGCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGGAA-----------------------------------------------------------------------GGCCCATCGC-------ACCAATCTCAAGTTTTGT
droFic1 scf7180000453932:197764-197926 - A-----------------------G---------------------------------TGGAAACTGTGCC----A--G-------------CCTTGAATTGATTTC-------------------GGCTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTGCT----T--GGGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCAG----------GCCAATCG-----------------------------------------------CTCGAG-------------------TGACCGTGAGTTTTGT
droKik1 scf7180000302389:431165-431364 - CGCCTAAC---CGGTGG-AAAATAGTGGA--AAATGGTGAAAA-ACGGCAGAAAACGGTGGAAACTGGGCC----A----------------GGTTAAATTGATTTC-------------------CATTTTGTTCCACATTCTTAATACT------CGGGTTGGCAAAGACCTTTCCA----G--GAGGCGCCTTTGTCATCGGGGGTATTATGAAATATGGTCCAAAGCAACTGCAG---------------------------------------------------------GCGGTAGT------GAATC------------------------ATTTGT
droAna3 scaffold_12916:11084678-11084871 + dan_32 confident TGGCCAAC-------------------------------------------------------AATGT--CGGCCA--G------GGTGGA-AGTTAAATTTATTTC-------------------AATTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTCCT----G--GAGCCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAAACCAGCACAATGTATCG-GCCAATAGGCCAATTAACCCGGACC------------AATCAA-----------------------------------------TATGAGTTTTGT
droBip1 scf7180000396572:742435-742620 + TGGCCAAC-------------------------------------------------------AATGT--CGGCCA--G-------GGTAA-AGTTAAATTTATTTC-------------------AATTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGAGCTATCCT----G--GAGCTGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAACACACCACAACGCATCG-GCCAATCGATC-------C--CACTAATCAATAT---------------------------------------------------ACGAGTTTTGT
dp5 4_group4:3182560-3182760 - dps-mir-959 Known_mirbase TGTTCAA-------------------------------------------------------------------------------------AGTGAAATTGGTTTTCGTTTACGTTT-TTTTTTTGTTTTGGTTCTATGTTCTTAGTACT------TGGGTTGATAAAGACCACTCGTAGTGT--GAGAAGCCTTTGTCATCGCGGGTATTATGCAACATAGCTCAAAAGCGCAACAAAATACACA-A----------AA-----------------AATATACACGTAAATGTG--------TGTGGG---TGTGCGT----------GTGTGC-GGGTGTGT
droPer2 scaffold_10:2201491-2201684 - dpe_32 confident TGTTCAA-------------------------------------------------------------------------------------AGTGAAATTGGTTTTCGTTCACGTTTTTTTTTTTGTTTTGGTTCTATGTTCTTAGTACT------TGGGTTGATAAAGACCACTCGTAGTGT--GAGAAGCCTTTGTCATCGCGGGTATTATGCAACATAGCTCAAAAGCGCAACAAAATACACA-A----------AA-----------------AATATACACGTAAATGTG--------TGTGGG----------------------TGTGCGGGTGTGT
droWil2 scf2_1100000004521:8626254-8626438 - dwi_198 confident TGCAAAAA---CAGT------------------------------------------------------------------------TTAG-TGAAAAAGTGACTTA-------------------AGTTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACAAAATGT---TTACCAATCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAGTTCAACATAATAATTA-A----------GAATTAACTTTGAAT------TGGAA-----------ACGATATT------GA---------------------AAT-GAATTTAT
droVir3 scaffold_12963:3615190-3615191 + TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:14018121-14018210 + AGAAATGT---GG----------GG---------------------------------CT---------------------------CTGA-TGTAATAAGTGTTTT-------------------AGCTTTAAGTTGTGCCATTTTAA-----------ATTGAAAAA-----------------------------------------------AGTGAAGATTGA--------------------------------------------------------------------------------------------------------AAATTGACTAAGT
droGri2 scaffold_15252:3146861-3147016 + TGTAAAAC----GGTAA-GGAGTGATGCATGTAATGGCAAAAATACCTCAAAGAGTAGCAGGAG---------------------TAGTTAAGTTGTAGTTTCTTAC-------GGTTTTTTTTTTAATAACATGC------TTTAGTGCTTCAATGTAGGTGGCTCAAGATATTTGT-----T--GATTGGCCTTGG-----------------------------------------------------------------------------------------------------------------------------------------------TTAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TGCCCAGT---GGAT------------------------------------------------C------C----------------CGCG-AGTTAAATTGATTTT-------------------AACTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGACCTTTCCT----T--GCGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCAA-----------------------------------------------------------------------GGATCATCGC-------TTCGCCCGCGTGTTTTGTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGA.................................................................................................................................211289.002898521122632050
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAG...............................................................................................................................................................................211179.001790300001750010
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAGA..............................................................................................................................................................................221164.001642410001560010
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAA................................................................................................................................................................................211104.00104521000960000
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAAG...............................................................................................................................................................................22196.0096111000921000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATG..................................................................................................................................20186.0086150021770000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGA.................................................................................................................................20175.0075340000680000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAA................................................................................................................................22141.0041910010222060
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAA...............................................................................................................................23131.00311000001172010
..............................................................................................................................................CTTAGTACT------CGGGTTGACAA.................................................................................................................................................................................20131.0031530000230000
...............................................................................................................................................TTAGTACT------CGGGTTGACAAA................................................................................................................................................................................20130.0030100000290000
..............................................................................................................................................CTTAGTACT------CGGGTTGACA..................................................................................................................................................................................19126.0026350010170000
.............................................................................................................................................TCTTAGTACT------CGGGTTGACA..................................................................................................................................................................................20120.0020310000160000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTAT...................................................................................................................................19118.0018104000040000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGA.................................................................................................................................22114.0014200000120000
.............................................................................................................................................TCTTAGTACT------CGGGTTGACAAA................................................................................................................................................................................22113.0013000000130000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATG..................................................................................................................................1919.00901000080000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGT.................................................................................................................................2118.00813000040000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAA................................................................................................................................2117.00730000040000
.............................................................................................................................................TCTTAGTACT------CGGGTTGACAA.................................................................................................................................................................................2116.00640000020000
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAGT..............................................................................................................................................................................2215.00500001040000
...............................................................................................................................................TTAGTACT------CGGGTTGACAA.................................................................................................................................................................................1915.00530000020000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAA...............................................................................................................................2214.00410000020010
...............................................................................................................................................TTAGTACT------CGGGTTGACA..................................................................................................................................................................................1814.00420000200000
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAAA...............................................................................................................................................................................2213.00300000030000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATG..................................................................................................................................2113.00310000020000
..............................................................................................................................................CTTAGTACT------CGGGTTGAC...................................................................................................................................................................................1813.00330000000000
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAA...............................................................................................................................................................................2113.00300000030000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTAT...................................................................................................................................2013.00310000020000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATA..................................................................................................................................2013.00311000010000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGT.................................................................................................................................2012.00200000020000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTA....................................................................................................................................1812.00220000000000
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAAGT..............................................................................................................................................................................2312.00200000020000
..............................................................................................................................................CTTAGTACT------CGGGTTGACT..................................................................................................................................................................................1911.00100000010000
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAG................................................................................................................................................................................2111.00100000010000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGG.................................................................................................................................2011.00100000010000
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAT................................................................................................................................................................................2111.00100000010000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAA...............................................................................................................................2411.00100000010000
.....................................................................................................................................................................................................GTCATCGGGGGTATTATG..................................................................................................................................1811.00101000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAT..............................................................................................................................2411.00110000000000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGC.................................................................................................................................2011.00100000010000
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAGG..............................................................................................................................................................................2211.00100000010000
.............................................................................................................................................TCTTAGTACT------CGGGTTGACAAAA...............................................................................................................................................................................2311.00100000010000
................................................................................................................................................TAGTACT------CGGGTTGACAAAG...............................................................................................................................................................................2011.00101000000000
.............................................................................................................................................TCTTAGTACT------CGGGTTGAC...................................................................................................................................................................................1911.00100000010000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAT................................................................................................................................2311.00100000001000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATT..................................................................................................................................2011.00101000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGC.................................................................................................................................2111.00100000010000
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAGAA.............................................................................................................................................................................2311.00100000010000
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAAT...............................................................................................................................................................................2211.00100000010000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGTT................................................................................................................................2211.00101000000000
...............................................................................................................................................TTAGTACT------CGGGTTGACAT.................................................................................................................................................................................1911.00110000000000
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAAC...............................................................................................................................................................................2211.00100000010000
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAC................................................................................................................................................................................2111.00100000010000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGG.................................................................................................................................2111.00100000010000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAA..............................................................................................................................2411.00110000000000
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAAAT..............................................................................................................................................................................2311.00100000010000
droEre2
CGACCAG---------------------------------------------------TGCAAATGGG-----------------GCCTCG-AGTTAAATTGATTTT-------------------AACTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGAGCTTTCCT----T--GCGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCAA-----------------------------------------------------------------------GGAGCAACGC-------ACCGCCCGCGTTTTTTGTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGA.................................................................................................................................2111566.0015667120013871510
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAGA..............................................................................................................................................................................221663.006631032605520
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAG...............................................................................................................................................................................211499.004990020459380
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATG..................................................................................................................................201311.003116070275230
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAA................................................................................................................................221219.00219205020570
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAAG...............................................................................................................................................................................221147.001471021128150
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAA...............................................................................................................................231102.0010200109290
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGA.................................................................................................................................22187.008700008430
...............................................................................................................................................TTAGTACT------CGGGTTGACAAA................................................................................................................................................................................20186.0086002074100
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGA.................................................................................................................................20174.007410106750
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAA................................................................................................................................................................................21160.006001005180
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATG..................................................................................................................................21131.003100102910
.............................................................................................................................................TCTTAGTACT------CGGGTTGACA..................................................................................................................................................................................20131.003100102640
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGT.................................................................................................................................21127.002700102600
....................................................................................................................................................................................................TGTCATCGGGGGTATTATG..................................................................................................................................19126.002600202220
..............................................................................................................................................CTTAGTACT------CGGGTTGACA..................................................................................................................................................................................19125.002500002320
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAGAA.............................................................................................................................................................................23121.002100002100
..............................................................................................................................................CTTAGTACT------CGGGTTGACAA.................................................................................................................................................................................20118.001800111420
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAGT..............................................................................................................................................................................22116.001600001600
...................................................................................................................................................................................................TTGTCATCGGGGGTATTAT...................................................................................................................................19115.001510201200
...............................................................................................................................................TTAGTACT------CGGGTTGACAA.................................................................................................................................................................................19111.00110000920
.............................................................................................................................................TCTTAGTACT------CGGGTTGACAAA................................................................................................................................................................................2219.0090000540
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAT...............................................................................................................................2318.0080010700
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAA..............................................................................................................................2418.0080000710
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAA...............................................................................................................................................................................2117.0070000700
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAA................................................................................................................................2116.0060000600
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGT.................................................................................................................................2216.0060000510
.............................................................................................................................................TCTTAGTACT------CGGGTTGACAA.................................................................................................................................................................................2115.0050000320
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAA...............................................................................................................................2215.0050000500
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAAGT..............................................................................................................................................................................2314.0040000400
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAAGA..............................................................................................................................................................................2313.0030000210
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAGAT.............................................................................................................................................................................2313.0030000300
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGTT................................................................................................................................2213.0030000210
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAA................................................................................................................................2313.0030000300
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAGAAA............................................................................................................................................................................2413.0030000300
.............................................................................................................................................TCTTAGTACT------CGGGTTGAC...................................................................................................................................................................................1913.0030000210
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTAT...................................................................................................................................2013.0030000300
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGT.................................................................................................................................2012.0020000200
...............................................................................................................................................TTAGTACT------CGGGTTGACA..................................................................................................................................................................................1812.0020000110
................................................................................................................................................TAGTACT------CGGGTTGACAAAGA..............................................................................................................................................................................2112.0020000200
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAAA...............................................................................................................................................................................2212.0020000020
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAT...............................................................................................................................................................................2112.0020000110
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAA...............................................................................................................................2411.0010000100
................................................................................................................................................TAGTACT------CGGGTTGACAAAG...............................................................................................................................................................................2011.0010000100
..........................................................................................................................................................................AGCTTTCCT----T--GCGGCGCCT......................................................................................................................................................1911.0010000100
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATT..................................................................................................................................2011.0010010000
.................................................................................................................................................AGTACT------CGGGTTGACAAAGT..............................................................................................................................................................................2011.0010000010
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAT................................................................................................................................2211.0010000100
...............................................................................................................................................TTAGTACT------CGGGTTGACATT................................................................................................................................................................................2011.0010000100
.............................................................................................................................................TCTTAGTACT------CGGGTTGACT..................................................................................................................................................................................2011.0010000100
...............................................................................................................................................TTAGTACT------CGGGTTGACT..................................................................................................................................................................................1811.0010000100
...............................................................................................................................................TTAGTACT------CGGGTTGACAAAGAAG............................................................................................................................................................................2411.0010000100
...............................................................................................................................................TTAGTACT------CGGGTTGACAAGA...............................................................................................................................................................................2111.0010000100
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGC.................................................................................................................................2011.0010000100
...................................................................................................................................................................................................TTGTCATCGGGGGTATTA....................................................................................................................................1811.0010000100
..............................................................................................................................................CTTAGTACT------CGGGTTGAC...................................................................................................................................................................................1811.0010000010
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAAT.............................................................................................................................2511.0010000100
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAT..............................................................................................................................2411.0010000100
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAC................................................................................................................................................................................2111.0010000100
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAAT..............................................................................................................................2311.0010000001
.............................................................................................................................................TCTTAGTACT------CGGGTTGACAT.................................................................................................................................................................................2111.0011000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGG.................................................................................................................................2111.0010000010
..............................................................................................................................................CTTAGTACT------CGGGTTGACT..................................................................................................................................................................................1911.0010000100
.............................................................................................................................................TCTTAGTACT------CGGGTTGACAAATT..............................................................................................................................................................................2411.0010000100
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAT................................................................................................................................2311.0010000010
...............................................................................................................................................TTAGTACT------CGGGTTGACAAT................................................................................................................................................................................2011.0010000010
.....................................................................................................................................................................................................GTCATCGGGGGTATTATGA.................................................................................................................................1911.0010000010
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGATT...............................................................................................................................2311.0010000100
..............................................................................................................................................CTTAGTACT------CGGGTTGACAAAGTT.............................................................................................................................................................................2411.0010000100
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAC..............................................................................................................................2411.0010010000
..............................................................................................................................................CTTAGTACT------CGGGTTGACAATT...............................................................................................................................................................................2211.0010000100
droSec2
CGCCCAGT---G----------CAG---------------------------------TTCAAAATGTGCC----A--G----------CG-AATTAAATAGATTTT-------------------AACTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTTCT---TT--GCGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAGCTGCAA-----------------------------------------------------------------------GGATCATCGT-------ACCGCCCACGGGTTTTGTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................221376.00376325210714
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................211248.002482221169
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGA.................................................................................................................................211199.0019931601818
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGA.................................................................................................................................22167.0067049144
...............................................................................................................................................TTAGTACT------CGGGTTGATAAA................................................................................................................................................................................20166.006606222
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................22163.006305841
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAA................................................................................................................................................................................21153.005304481
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGA.................................................................................................................................20144.004413463
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATG..................................................................................................................................20137.003732941
..............................................................................................................................................CTTAGTACT------CGGGTTGATAA.................................................................................................................................................................................20129.002902810
..............................................................................................................................................CTTAGTACT------CGGGTTGATA..................................................................................................................................................................................19119.001901405
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAA................................................................................................................................22115.00151761
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................23112.00120660
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAA...............................................................................................................................22112.00121380
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATG..................................................................................................................................21110.00100703
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAA...............................................................................................................................23110.00100541
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAA.............................................................................................................................................................................23110.00100910
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAA................................................................................................................................2319.0092151
...............................................................................................................................................TTAGTACT------CGGGTTGATAA.................................................................................................................................................................................1918.0080800
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAA...............................................................................................................................................................................2117.0070502
....................................................................................................................................................................................................TGTCATCGGGGGTATTATG..................................................................................................................................1917.0070421
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGT..............................................................................................................................................................................2215.0050500
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAA...............................................................................................................................2414.0040310
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAA................................................................................................................................2114.0040130
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAT...............................................................................................................................................................................2113.0030300
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAAA............................................................................................................................................................................2413.0030210
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTAT...................................................................................................................................2013.0030300
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGT.................................................................................................................................2213.0030201
...............................................................................................................................................TTAGTACT------CGGGTTGATAAT................................................................................................................................................................................2012.0020200
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAT.............................................................................................................................................................................2312.0020101
.............................................................................................................................................TCTTAGTACT------CGGGTTGATAA.................................................................................................................................................................................2112.0020200
...................................................................................................................................................................................................TTGTCATCGGGGGTATTAT...................................................................................................................................1912.0020101
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAGT..............................................................................................................................................................................2311.0010100
................................................................................................................................................TAGTACT------CGGGTTGATAAA................................................................................................................................................................................1911.0010001
..............................................................................................................................................CTTAGTACT------CGGGTTGAT...................................................................................................................................................................................1811.0010001
....................................................................................................................................................................................................TGTCATCGGGGGTATTATT..................................................................................................................................1911.0010100
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAT...............................................................................................................................2311.0010001
...............................................................................................................................................TTAGTACT------CGGGTTGATAAGA...............................................................................................................................................................................2111.0010010
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGC..............................................................................................................................................................................2211.0010100
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGT.................................................................................................................................2111.0010100
................................................................................................................................................TAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................2111.0011000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAC................................................................................................................................2311.0010010
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAT..............................................................................................................................2411.0010010
.................................................................................................................................................AGTACT------CGGGTTGATAAAG...............................................................................................................................................................................1911.0010100
...............................................................................................................................................TTAGTACT------CGGGTTGATTT.................................................................................................................................................................................1920.5010100
...............................................................................................................................................TTAGTACT------CGGGTTGATCC.................................................................................................................................................................................1930.3310001
droSim2
CGCCCAGT---G----------CAG---------------------------------TTCAAAATGTGCC----A--G----------CG-AATTAAATAGATTTT-------------------AACTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTTCT---TT--GCGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAGCTGCAA-----------------------------------------------------------------------GGATCATCGT-------CACGCCCACGGGTTTTGTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAA................................................................................................................................2211639.001639063216641937014191431001
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGA.................................................................................................................................2111453.00145304422774138291113812851001
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAA...............................................................................................................................2311248.00124802100160733000051166000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................2211122.00112201427110169304112302470001
...................................................................................................................................................................................................TTGTCATCGGGGGTATTAT...................................................................................................................................191850.00850149008820200101706000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGA.................................................................................................................................201771.007710900250244000702664000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATG..................................................................................................................................201690.0069003009212541001102515000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAA...............................................................................................................................221581.005810120117231100000535000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................211486.00486116011706686002401274000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAA................................................................................................................................211408.0040806002010700002372000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAA................................................................................................................................................................................211363.0036326630660313941502144000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAA................................................................................................................................................................................201333.0033311360029028410090188000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATG..................................................................................................................................191242.0024200003007100100203000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAA.................................................................................................................................................................................201211.00211134006525140010089000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTAT...................................................................................................................................201163.00163126003501000000100000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................221134.0013403109014210010084010
...............................................................................................................................................TTAGTACT------CGGGTTGATAA.................................................................................................................................................................................191132.0013204100291890050039000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGA.................................................................................................................................221122.001220121118030322030023000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAA..............................................................................................................................241107.001070200000300000102000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGT.................................................................................................................................20196.0096000000000000096000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATG..................................................................................................................................21195.00950300230530010060000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGT.................................................................................................................................21190.0090020000000000088000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTA....................................................................................................................................18177.00770170055000001004000
..............................................................................................................................................CTTAGTACT------CGGGTTGATA..................................................................................................................................................................................19164.00640501901940020024000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTA....................................................................................................................................19150.00500300150010010030000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATT..................................................................................................................................20138.0038030000000000035000
..............................................................................................................................................CTTAGTACT------CGGGTTGATTT.................................................................................................................................................................................20138.0038000000000000038000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAA...............................................................................................................................24136.0036061030020000024000
...............................................................................................................................................TTAGTACT------CGGGTTGATA..................................................................................................................................................................................18135.0035023009000002001000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................23133.0033030000149000007000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAA.............................................................................................................................................................................23130.0030080000430000015000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAT................................................................................................................................22130.0030000000000000030000
..............................................................................................................................................CTTAGTACT------CGGGTTGATT..................................................................................................................................................................................19130.0030020000000000028000
....................................................................................................................................................................................................TGTCATCGGGGGTATTAT...................................................................................................................................18129.0029040014110000009000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAAA..............................................................................................................................23127.0027000000000000027000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAA................................................................................................................................23126.002607214031000008000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAA...............................................................................................................................................................................21126.0026050000300000018000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAT...............................................................................................................................23124.0024020000000000022000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTAA...................................................................................................................................19123.0023000000000000023000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAT..............................................................................................................................24121.0021000000000000021000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAA...............................................................................................................................................................................22121.0021010000000000020000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGTT................................................................................................................................22119.0019000000000000019000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGT.................................................................................................................................22117.0017000000010000016000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATA..................................................................................................................................20117.0017000000000000017000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTT....................................................................................................................................19117.0017010000000000016000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATT.....................................................................................................................................18116.0016020010000000004000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGTT................................................................................................................................21116.0016000000000000016000
.............................................................................................................................................TCTTAGTACT------CGGGTTGATAA.................................................................................................................................................................................21113.001304000000100017000
..............................................................................................................................................CTTAGTACT------CGGGTTGAT...................................................................................................................................................................................18113.001303008001000001000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATTT.................................................................................................................................21112.0012000000000000012000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATT..................................................................................................................................19112.0012000000000000012000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGG.................................................................................................................................21111.0011010000001000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATT..................................................................................................................................................................................1819.00918000000000000000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATA..................................................................................................................................1919.00900000000000009000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGTTT...............................................................................................................................2218.00800000000000008000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAAA............................................................................................................................................................................2418.00802000031000002000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGG..............................................................................................................................................................................2218.00808000000000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAC.............................................................................................................................................................................2317.00700006000001000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGT..............................................................................................................................................................................2217.00703000011000002000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGTTT...............................................................................................................................2316.00600000000000006000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAG...............................................................................................................................2315.00500000000000005000
.............................................................................................................................................TCTTAGTACT------CGGGTTGATAAA................................................................................................................................................................................2215.00501000000000004000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATT..................................................................................................................................2115.00501000000000004000
...............................................................................................................................................TTAGTACT------CGGGTTGAT...................................................................................................................................................................................1715.00500000022001000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTT....................................................................................................................................1815.00500000000000005000
...............................................................................................................................................TTAGTACT------CGGGTTGATAT.................................................................................................................................................................................1915.00500000000000005000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAT.................................................................................................................................................................................2015.00500000000000005000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAAT..............................................................................................................................2314.00400000000000004000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAT...............................................................................................................................2214.00400000000000004000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTAAA..................................................................................................................................2013.00300000000000003000
.............................................................................................................................................TCTTAGTACT------CGGGTTGATA..................................................................................................................................................................................2013.00301000000000002000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGC.................................................................................................................................2113.00301000000000002000
................................................................................................................................................TAGTACT------CGGGTTGATAA.................................................................................................................................................................................1813.00302001000000000000
.............................................................................................................................................TCTTAGTACT------CGGGTTGAT...................................................................................................................................................................................1913.00300000000000003000
..............................................................................................................................................CTTAGTACT------CGGGTTG.....................................................................................................................................................................................1612.00200000000001001000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAG................................................................................................................................................................................2112.00200000000000002000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATA..................................................................................................................................2112.00200000000000002000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTTA...................................................................................................................................1922.00400000000000004000
.............................................................................................................................................TCTTAGTACT------CGGGTTGA....................................................................................................................................................................................1812.00200001000000001000
...................................................................................................................................................................................................TTGTCATCGGGGGTATT.....................................................................................................................................1712.00200000000001001000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGTT................................................................................................................................2312.00200000000000002000
...........................................................................................................................................................................CCTTTTCT---TT--GCGGAGCC.......................................................................................................................................................1812.00202000000000000000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAT................................................................................................................................2112.00200000000000002000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAGT..............................................................................................................................................................................2312.00200000011000000000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAT................................................................................................................................2312.00200000000000002000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAAT..............................................................................................................................................................................2212.00200000000000002000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAC................................................................................................................................2212.00201000000000001000
....................................................................................................................................................................................................TGTCATCGGGGGTATTAAA..................................................................................................................................1912.00200000000000002000
................................................................................................................................................TAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................2011.00100010000000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGACT...............................................................................................................................2311.00100000000000001000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAC...............................................................................................................................2311.00100000000000001000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTG....................................................................................................................................1811.00101000000000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATG..................................................................................................................................................................................1811.00101000000000000000
...............................................................................................................................................TTAGTACT------CGGGTTGA....................................................................................................................................................................................1611.00100000001000000000
.....................................................................................................................................................CT------CGGGTTGATAAAG...............................................................................................................................................................................1511.00100000000001000000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGACT...............................................................................................................................2411.00101000000000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAAC.............................................................................................................................2511.00100000000000001000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATTT.................................................................................................................................2021.00200000000000002000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAATA...............................................................................................................................................................................2211.00100000000000001000
......................................................................................................................................................T------CGGGTTGATAAAGA..............................................................................................................................................................................1511.00100000000001000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAATT...............................................................................................................................................................................2111.00100000000000001000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAT...............................................................................................................................................................................2211.00100000000000001000
......................................................................................................................................................................................................TCATCGGGGGTATTATGAA................................................................................................................................1911.00100000000000001000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAG................................................................................................................................2111.00100000000000001000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTAC...................................................................................................................................2011.00101000000000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAG................................................................................................................................2211.00101000000000000000
.....................................................................................................................................................................................................GTCATCGGGGGTATTATGAA................................................................................................................................2011.00100000000000001000
...............................................................................................................................................TTAGTACT------CGGGTTG.....................................................................................................................................................................................1511.00100000000001000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAATT..............................................................................................................................................................................2211.00100000000000001000
..............................................................................................................................................CTTAGTACT------CGGGTTGAAT..................................................................................................................................................................................1911.00100000000000001000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAAA..............................................................................................................................2511.00100000000000001000
..............................................................................................................................................CTTAGTACT------CGGGTTGATATT................................................................................................................................................................................2111.00100000000000001000
................................................................................................................................................TAGTACT------CGGGTTGATAAA................................................................................................................................................................................1911.00100000000000001000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAG...............................................................................................................................2211.00100000000000010000
.....................................................................................................................................................CT------CGGGTTGATAAAGA..............................................................................................................................................................................1611.00100000000001000000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAT................................................................................................................................................................................2111.00100000000000001000
dm3
TGCCCAGT---GGATGCTAAAGCAG---------------------------------TGCAAAATGTGCC----A--GCG-GGGGCCCCG-AATTAAATTGATTTT-------------------AACTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTTCT---TC--AGGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAACTGCAA-----------------------------------------------------------------------TGATTATCGT-------ACCGCCCACGGGTTTTGTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGA.................................................................................................................................21121789.0021789000003000008000000000103665000000000001115342844271271251020000000000000000000000004110230000020130111741880025490060040832012300001000000001000001000000000162744232416946146000003000050200000711030300001513801284765227001001238916400001650012101007147241893637421583825100850000100011000001089005000000200000001000020036264218337215001002521082559042512405601309823524001271611050001110019110641201726294303200
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................21112432.0012432000000000002000000100112436001000000003803391421414163831813200000000000000000000000110102000000002001621180011041032100810130000000020000000000000000000010153320251136586000000000001002000801000310000012801519564000446011319100002100310000023107411616192460178483200000000100100000580046000000001000000000000452183145330221000024110102474045911314741383573111000322140101000001001192373142030203600420
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................22111744.001174400000000000500000000310139800000000000291210416014177119206200000000000000000000000011110000000001013100280014140011000410001300000010100001000000000000000418341315503346000000002000001000401010000002022151116396500255216955000004700000000016684824420359945368769000021003100000007700360000010000000000000005130351662611701100000142722160211161527490126557091300832858008002001001466567242656646501102
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATG..................................................................................................................................2018383.00838300000100000400000000001309400000000000252120113021505392100000000000000000000000000000000000110101901190001010000000300080010000010000000000000000000026131014540454000000000020102000210010300001004671616607000428168919000000200010010019154232813155511721120000000000000010037002700000200000000000020010520311136100001613001263020602130418217130002429000000000002928545451900000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGA.................................................................................................................................2214822.0048220000010000000000000000066200000000000030010133013211333000000000000000000000000310000000000140017017000000000000115000000000000000000000000000000001291110535041300000502200110000010101020000110185510802200212181813100002500000002185902713121853221242340000010000000000014001300000000000000001000010520218340000011001156204117493432194930095721014000000014821518812101800111
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGA.................................................................................................................................2013882.0038820000010000021000000000065600000000000130000322000000010000000000000000000000000000100000001120073212000411100020211301001200000000000000000000000000000045332201110000020000010010002000001000020014648270000152050415000000000000000016752332832369101100000000100000011200070000020000000000000006370208050000002011367100013311826818617200237110000000100037011922421501000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAA................................................................................................................................2213454.00345400000200001180000000000011370000000000001000001001110032100000000000000000000000000100000000315006202420045130110100750005000000000000000000000000000000333260212000000000002003000401010300001001194545100014913473000000000000000047208142210411913302810001000000000000180070000000000000000001001510618310112000000000296110108155410177290012550010001001070261012200000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAA................................................................................................................................................................................2013081.003081000000000000100000000004960000000000012000020111320221000000000000000000000000000001000000100004109000201004000010002000000000000210000000000000002712510001200000000000010000020000000000001788530300011403040000002200000000023122020262234000000001000000008001600000200000000000000023771921716000000210014530123241093481662980005880000000000035210042581500100
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATG..................................................................................................................................2113010.00301000000000000000000000000964000000000000100000310020124020000000000000000000000001000000000000000100110000100010000100000010000000001000000000000000014646200101000000000000000000100001000003001705577020017502811500000000000000002340134310217111120000000000000001114009000000000000000000000211030000000001120026720000024524180420071470000000000080480223400000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................2212461.002461000000000002000000001003620000000000011111214010111034110000000000000000000000000000000000000001170020000000000000131002000000000000000000000000000002661083101200000000000000000000500000000000056228519005601684020000500000020034012699105671191500010000100000001900900000000000000000000010411123010000000003653101251269406108173002668001000000002301051141162000200
....................................................................................................................................................................................................TGTCATCGGGGGTATTATG..................................................................................................................................1911643.00164300000000000000000000000681000000000000100000201001000000000000000000000000000000000000000000000810900001000003006100300000000000000000000000000000111006000000000000000010000011100010000000791329000010301060000000000000000031803013500210000000000001000017005000000000000000000100080010020000003010041000000221574428001010000000000070120000301000
...............................................................................................................................................TTAGTACT------CGGGTTGATAA.................................................................................................................................................................................191982.009820000000000000000000001022600000000000010000000101100000000000000000000000000000000000000000000010010000010000020000120000000000001000000000000000001002701000000000000010000000000200000000039015220005101152000000000000000028060002003100000000000000000200100000000000000000000021700020100000032000151010002439236760011540000000000040162303100000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAA................................................................................................................................................................................211968.00968000000000004000000000001090000000000002000002000201011000000000000000000000000000101000000111004310900010100200001600010000000000000000000000000000000100150000000000000000100000351000110000002431081300170710000000000000002001802516314216140000000000000000030050000000000000000000008240203110000000000418000023126104396100115700000011000220442040800010
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAA................................................................................................................................211719.00719000000000005000000000002690000000000000000010000000000000000000000000000000000000000000000102003100220012000020010270005000000000000000000000000100000001010000000000000000000000100000000000001309000003405100000001000200200313120001212300000000010000000600300000000000000000000021901130100000000001130000000142381100091000000000001070000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTAT...................................................................................................................................191651.0065100000000000000000000000273000000000000100001200011000010000000000000000000000000000000000000100011300000000000002000000000000000000000000000000000033012020100000000000010000000002000000001314950000290410000000000000010006101299043200000000000000000600200000000000000000020011012010200000000000810100003431900021000000000003050000500000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAATC..............................................................................................................................241626.006260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495131000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAA...............................................................................................................................221597.0059700000000000400000000001162000000000000001000000000000000000000000000000000000000000000000001301410222001300003000036010900000000000000000000000000000101003000100000000000000000000100000000000150770000130280000000100000000051101122672221000000020000000050020000000000000000000008170001020000000006211100000081819700251000000000003010000200000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................231582.005820000000000020000000000026000000000000000101100000000000000000000000000000000000000000000000000300000000000000006000200000000000000000000000000000014101006201000000000000000001000000000000011062000070680000001000000020021000442188214100000000000000000040010000000000000000000005120000000000000000317000000199119500003210000000000080231135300000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAA.................................................................................................................................................................................201552.0055200000000000000000000000860000000000000000103000001002000000000000000000000000000100000000010006002000000001001021002000000000000000000000000000000013180005000000000000100000010000000000002017310002401900000000000000001015110230700920000000000000000010010000000000000000000002100201010000000000072010200137428440011410100000000070130010502000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGATC...............................................................................................................................231537.005370000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000389148000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAA................................................................................................................................231474.004740000000000020000000000046000000000001000000100000000110000000000000000000000002000000000000000700500000200000005000000000000000000000002100000000051109000200000000000000100010001000000000250780000171660000000000000000021002765123967000000000000000001002000000000000000000000213000407000000000009000022083012300172000000000001090101300100
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAA...............................................................................................................................231434.00434000000000004000000000004900000000000001000000000000000000000000000000000000000000000000000021112017100001001001023000200000000000000000000000000000001111002000000000000010000010000000000000240880000120650000001000000000011012140653630000000000000000020000000000000000000000001100001010000000001012100100142117600021000000000002020000001000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTAT...................................................................................................................................201391.00391000000000000000000000001140000000000000000000000000001000000000000000000000000111000000000001002011000000000000010000000000000000000000000000000000110100000000000000000000000000000000000001417820001303310000000000000001320112313224900000000000000000200000000000000000000000002000100010000100001320011201326200060000000000000140010000000
..............................................................................................................................................CTTAGTACT------CGGGTTGATA..................................................................................................................................................................................191390.0039000000000000000000000000250000000000000000001000001000000010000000000000000000000000000000000003002000000000000010000000000000000000000000000000000001143200000000001000000000010002040000101608600001707100000000000000100130530150033000000000000000000002000000000000000000000040000000000001000030000000530716000500000000000083203042800000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAATC...........................................................................................................................................................................251332.00332000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027161000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAA.............................................................................................................................................................................231308.00308000000000000000000000001500000000000000000010011000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000001001102000000000000000000000000000000000011051000050650000000000000000001020102100100006200000000000500100000000000000000000004000010000000000003001011114461911000300000000000030161001300000
...............................................................................................................................................TTAGTACT------CGGGTTGATA..................................................................................................................................................................................181302.0030200000000000000000000000520000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000000000000100000000000000000000000000000000000000005073100019048000000000000000000106001000000000000000000000000010000000000000000000000000000100000100000130000000251181700110000000000000081011300000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGATC...............................................................................................................................241240.00240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017466000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAA...............................................................................................................................................................................211215.00215000000000001000000000002100000000000010000010000000101000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000400000000000000000000000000000000000090350000603700000000000000000021210010101000000000000000001000000000000000000000000230101010000000010010001010102491400050000000000002071001100000
.............................................................................................................................................TCTTAGTACT------CGGGTTGATAA.................................................................................................................................................................................211167.0016700000000000000000000000350000000000000000000000110000000000000000000000000000000000000000000002000000000000000000010000000000000000000000000000000200010000000000000000000000010000000000002122000020800000020000000000030002400020000000000000000003001000000000000000000000280101110000000000010010000320121200040000000000000020001001000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAATC..............................................................................................................................231152.00152000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012032000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TCTTAGTACT------CGGGTTGATAAA................................................................................................................................................................................221143.0014300000000000000000000000240000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000004010000020130000000000000000001002000312000000000000000000100000000000000000000000032021600000000001002000000081561300030000000000003081012100000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAATC..............................................................................................................................251141.00141000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010734000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTA....................................................................................................................................191127.0012700000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000000000000030000000000000000000000000010200000004025000060500000000000000000020000011011000000000000000001000000000000000000000000020100000000000000020000000391100000000000000000030000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGT.................................................................................................................................211123.00123000000000000000000000003600000000000010001010000000000000000000000000000000000000000000000000010010000030000000000000000000000000000000000000000000000001000000000000000000000000000000000080170000801710000000000000000010000210010000000000000000004000000000000000000010000010000000000001000030000000090100010000000000000000000100000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAT................................................................................................................................221119.00119000000000001000000000004400000000000000000000000000000000000000000000000000000000020000000010010000000010000000000010000000000000000000000000000000000000000000000000000000000010000000000030110000401200000000000000000130011310011000011000000000002000000000000000000000000120000000000000000010000001252300020000000000001010000000000
.............................................................................................................................................TCTTAGTACT------CGGGTTGATA..................................................................................................................................................................................201102.00102000000000000000000000001200000000000000000000000000010000000000000000000000000000000000000000020000000000000000020080000000000000000000000000000000100100000000000000000000000000000000000040172000507000000000000000000301000000100000000000000000000010000000000000000000001100000000000000000100000002115600120000000000000030000100000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTA....................................................................................................................................18197.009700000000000000000000000410000000000000000000000000000000000000000000000000000000000000000000002000000000000000000003000000000000000000000000000000000050000000000000000000000000010000000004020000080300000000000000000000000001000000000000000000001000000000000000000000000010000000000000000020000000121100000000000000000000000000000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGATC...............................................................................................................................22196.009600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006926000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATT.....................................................................................................................................18193.0093000000000000000000000003100000000000000000000100000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000010040200000100800000000000000000000200000001000000000000000101000000000000000000000000000000000000001000030000000240000000000000000000010000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATT..................................................................................................................................20188.00880000000000000000000000011000000000000001011000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000001003000000000000001000000000000000000000002000003060000000000000000000000000000000000000000000000100000000000000000000000000000100000000000001000000081112300000000000000000000100000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAATC.............................................................................................................................25182.008200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAA...............................................................................................................................24181.008100000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000000000000000000000000000001000000000010010150000101300000000000000000030001032123000000000000000000000000000000000000000000120000000000000001160000000261000150000000000000011010100000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGT.................................................................................................................................22181.008100000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000001002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022000050400000000000000000110000010020000000000000000000000000000000000000000000000000000000000000020000000140000000000000000000010000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGC.................................................................................................................................21179.0079000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000101100004040000000000000000000000000000000000000000000000200000000000000000000000002000000000000000000000000015186400000000000000000001000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGT..............................................................................................................................................................................22167.006700000000000000000000000140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000020900000000000000000010100000000000000000000000002001000000000000000000000000000000000000000000000000462600000000000000000071000000000
....................................................................................................................................................................................................TGTCATCGGGGGTATTAT...................................................................................................................................18160.006000000000000000000000000250000000000000000000000000000000000000000000000000000000000000000000002100000000000000001002000000000000000000000000000000000000000000000000000000000000000000000000020000020300000000000000000010000000000000000000000000000000000000000000000000000000000100000000000010000000100000000000000000000000000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAC................................................................................................................................22150.00500000000000000000000000040000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000000000000000000000000050000000000000000000000000200000100110000000000000000000000000000000000000000000000000000000000000000000005203200000000000000001010000100000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGC..............................................................................................................................................................................22148.004800000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000200000020000000000000000000000000000000001000000000000000000000000000000000000001000000000000000011000001010185100010000000000000000000000000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATT..................................................................................................................................21144.00440000000000000000000000020000000000000000000000100010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000015000000300000000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000088000000000000000001000000000000
................................................................................................................................................TAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................21143.0043000000000000000000000006000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000300000000000000000000010000000000000000000000000000000000000000000000000000001010000000000000000100165800010000000000000020000100000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGT.................................................................................................................................20141.00410000000000000000000000019000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000108000000600000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000101100000000000000000000000000000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAT...............................................................................................................................22134.00340000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000010000000000000000000000000000000000000000003000030300000000000000000210010002010000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000010000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAT...............................................................................................................................................................................21134.0034000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000343400001000000000001010010000000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAAATC............................................................................................................................25133.00330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAAA............................................................................................................................................................................24132.0032000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000005000000600000000000000000000000000001000000000000000000000000000000000000000000000000000000000000010000100153100000000000000000060100000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAATC............................................................................................................................26130.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAAA..............................................................................................................................23129.0029000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000000300200000000000400000000000000000000000000000000000000000000000000000000000000000000000000000103000000200000000000000000010001000200000000000000000001000000000000000000000000000000000000000000000000100230100000000000000000000000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAC...............................................................................................................................23128.00280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000000003000000000000000000000000000000000212000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TCTTAGTACT------CGGGTTGAT...................................................................................................................................................................................19126.0026000000000000000000000006000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000340000000000000000000000000141200000000000000000001000100000
..............................................................................................................................................CTTAGTACT------CGGGTTGAT...................................................................................................................................................................................18126.0026000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000010100000000000000000000300010000000000000000000000000000000000000000000000110000000000000000010000000021000000000000000001010000000000
................................................................................................................................................TAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................20125.0025000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000003000000200000000000000000000000000000000000000000000000000000000000000000000000010001000000000000010000000070200000000000000000010000000000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAGAATC...........................................................................................................................................................................26125.00250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAT...............................................................................................................................23124.0024000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000101000000600000000000000000100001000020000000000000000000000000000000000000000000000000000000000000010000000041000000000000000000000000100000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATC..................................................................................................................................21124.00240000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000118000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAT.................................................................................................................................................................................19123.0023000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000070300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000211000000000000000000010000100000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAA...............................................................................................................................................................................22123.0023000000000000000000000005000000000000000000000010000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000100020000000000000000000000000000000000000000000000000000000000000000010000000021200000000000000000010000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAC................................................................................................................................................................................20119.0019000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000000000000000000000000175200000000000000000010000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAT.............................................................................................................................................................................23119.0019000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203000000200000000000000000010000000000000040000000000000000000000000000000000000000000000000000000000000000040100000000000000000010000000000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAC................................................................................................................................23118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000152600000000000000000000000000000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAATC.............................................................................................................................24117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGG.................................................................................................................................21117.0017000000000000000000000007000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000201000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGC.................................................................................................................................20116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000480100000000000000000000000000000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTT....................................................................................................................................19116.0016000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103000010200000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000020000000000000000000000000000000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAGT..............................................................................................................................................................................23115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000010300000000000000000100000020000000000000000000000001000000000000000000000000000000000000000010000000001000000000000000000011000000000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATT..................................................................................................................................19114.0014000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000001000000000000000000000000000000000000000002000000100000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000011200000000000000000000000000000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAGAA.............................................................................................................................................................................24114.0014000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000002000000100000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000001020100000000000000000010000100000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAAT............................................................................................................................................................................24114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATT..................................................................................................................................................................................18114.0014000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000002000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000201000000000000000000020000000000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGC.................................................................................................................................22114.0014000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000001000000100000000000000000010000000000000000000000000000000000000000000000000000010000000000000000000000000131000000000000000000010000000000
..............................................................................................................................................CTTAGTACT------CGGGTTGATT..................................................................................................................................................................................19113.0013000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000020300000000000000000010000000000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAT................................................................................................................................23113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000003000020200000000000000000010001100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAGAT.............................................................................................................................................................................24113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000010000000000000040000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATA..................................................................................................................................20113.0013000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAA..............................................................................................................................24112.0012000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000203000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGG..............................................................................................................................................................................22112.0012000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000201100000000000000000010000000000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAC...............................................................................................................................................................................21112.0012000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000020000000000000000000000000421100000000000000000000000000000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAT...............................................................................................................................................................................22111.0011000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000002000000200000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000001100000000000000001000000000000
droEug1
CCCCTAAC---CGATGC-AAAATAG---------------------------------TGGAAACTGTGCC----A--GAGAGGAGG-CCG-TGTAAAATTGATTTC-------------------AATTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGACCTTTCCT----T--GAGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCCG-----------------------------------------------------------------------AGCTCATCCTTCCTGCTACCTACCGCGATGTTTGTSizeHit CountTotal NormTotal
No Reads
droBia1
CGCCTAACCGCCGATGC-AAAGTAG---------------------------------TGGAAAATGTGCC----A--GCCCCTGGGCTTA-TGTAAAATTAATTTC-------------------AATTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTGCA----T--TGGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAGACTGCAA-----------------------------------------------------------------CGCGAAGG-------------------ACCGTGAGCTTTGCSizeHit CountTotal NormTotal
No Reads
droTak1
CGCCTAAC---CGATGC-AAAATAG---------------------------------TGGAAAATGTGCC----ACAGCCGGGAGGCTTA-TGTTAAATTCATTTC-------------------AATTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTT-CAT----C--GGGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCAA-----------------------------------------------------------------------GGCTCAGCAT-------GCCGACCTCGAGTTTTGTSizeHit CountTotal NormTotal
No Reads
droEle1
CGCCTAGC---CGATGA-AAAGTAG---------------------------------TGCAAACTGTGCC----G--ACCCGGAGGCCCG-TGTTAAATTGATTTC-------------------AATTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGACCCTTCCT----C--GCGGCGGCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGGAA-----------------------------------------------------------------------GGTGTGCTGT-------GCCAATCGCGAGCTTTGTSizeHit CountTotal NormTotal
No Reads
droRho1
CGCCTAAC---CGATGA-GAATTAG---------------------------------TGGAAACTGTGCC------------------CA-TGCTAGATGGATTTC-------------------AATGTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTCCT----T--GAGGCGGCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGGAA-----------------------------------------------------------------------GGCCCATCGC-------ACCAATCTCAAGTTTTGTSizeHit CountTotal NormTotal
No Reads
droFic1
A-----------------------G---------------------------------TGGAAACTGTGCC----A--G-------------CCTTGAATTGATTTC-------------------GGCTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTGCT----T--GGGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCAG----------GCCAATCG-----------------------------------------------CTCGAG-------------------TGACCGTGAGTTTTGTSizeHit CountTotal NormTotal
No Reads
droKik1
CGCCTAAC---CGGTGG-AAAATAGTGGA--AAATGGTGAAAA-ACGGCAGAAAACGGTGGAAACTGGGCC----A----------------GGTTAAATTGATTTC-------------------CATTTTGTTCCACATTCTTAATACT------CGGGTTGGCAAAGACCTTTCCA----G--GAGGCGCCTTTGTCATCGGGGGTATTATGAAATATGGTCCAAAGCAACTGCAG---------------------------------------------------------GCGGTAGT------GAATC------------------------ATTTGTSizeHit CountTotal NormTotal
No Reads
droAna3
TGGCCAAC-------------------------------------------------------AATGT--CGGCCA--G------GGTGGA-AGTTAAATTTATTTC-------------------AATTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTCCT----G--GAGCCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAAACCAGCACAATGTATCG-GCCAATAGGCCAATTAACCCGGACC------------AATCAA-----------------------------------------TATGAGTTTTGTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGA.................................................................................................................................211326.0032613001328416
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................221292.00292300725824
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................211186.00186400016517
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATG..................................................................................................................................20198.009815006761
...............................................................................................................................................TTAGTACT------CGGGTTGATAAA................................................................................................................................................................................20154.00541001493
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................22151.00512001462
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGA.................................................................................................................................20132.00326001232
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGA.................................................................................................................................22130.00302000235
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAA................................................................................................................................................................................21129.00290000281
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAA................................................................................................................................22125.00253001210
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATG..................................................................................................................................21124.00240002193
..............................................................................................................................................CTTAGTACT------CGGGTTGATAA.................................................................................................................................................................................20123.00230002192
..............................................................................................................................................CTTAGTACT------CGGGTTGATA..................................................................................................................................................................................19117.00172000132
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................23114.00141000121
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAA...............................................................................................................................23113.0013400180
....................................................................................................................................................................................................TGTCATCGGGGGTATTATG..................................................................................................................................19111.0011200171
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGT..............................................................................................................................................................................22111.00110000101
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGT.................................................................................................................................2118.008100160
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAA................................................................................................................................2117.007200230
...............................................................................................................................................TTAGTACT------CGGGTTGATAA.................................................................................................................................................................................1916.006000060
...................................................................................................................................................................................................TTGTCATCGGGGGTATTAT...................................................................................................................................1916.006200130
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAT...............................................................................................................................................................................2116.006000060
..............................................................................................................................................CTTAGTACT------CGGGTTGATT..................................................................................................................................................................................1915.005100040
...............................................................................................................................................TTAGTACT------CGGGTTGATAAT................................................................................................................................................................................2014.004000040
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAGT..............................................................................................................................................................................2314.004000040
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGC.................................................................................................................................2213.003100020
.............................................................................................................................................TCTTAGTACT------CGGGTTGATAA.................................................................................................................................................................................2113.003000120
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGTT.............................................................................................................................................................................2313.003000030
.............................................................................................................................................TCTTAGTACT------CGGGTTGATAAA................................................................................................................................................................................2213.003100020
.............................................................................................................................................TCTTAGTACT------CGGGTTGATA..................................................................................................................................................................................2013.003000030
...............................................................................................................................................TTAGTACT------CGGGTTGATATT................................................................................................................................................................................2013.003000030
...............................................................................................................................................TTAGTACT------CGGGTTGATA..................................................................................................................................................................................1813.003000201
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGC.................................................................................................................................2113.003000120
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGT.................................................................................................................................2213.003000030
..............................................................................................................................................CTTAGTACT------CGGGTTGATAT.................................................................................................................................................................................2012.002000110
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAA.............................................................................................................................................................................2312.002000020
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAT...............................................................................................................................2312.002000020
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTT....................................................................................................................................1912.002000020
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAA...............................................................................................................................2212.002000020
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTAT...................................................................................................................................2012.002000020
.............................................................................................................................................TCTTAGTACT------CGGGTTGAT...................................................................................................................................................................................1912.002000020
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAC...............................................................................................................................2312.002000020
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAA................................................................................................................................2312.002000110
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGT.................................................................................................................................2011.001000010
...............................................................................................................................................TTAGTACT------CGGGTTGATAAATT..............................................................................................................................................................................2211.001000010
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATT..................................................................................................................................2111.001000010
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAT.............................................................................................................................................................................2311.001000001
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAAA..............................................................................................................................2511.001000010
................................................................................................................................................TAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................2011.001000010
...............................................................................................................................................TTAGTACT------CGGGTTGATAAATG..............................................................................................................................................................................2211.001000010
................................................................................................................................................TAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................2111.001000010
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGATT............................................................................................................................................................................2411.001000010
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAA...............................................................................................................................................................................2211.001000010
...............................................................................................................................................TTAGTACT------CGGGTTGATAT.................................................................................................................................................................................1911.001000010
.............................................................................................................................................TCTTAGTACT------CGGGTTGATAAAT...............................................................................................................................................................................2311.001000010
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGTC................................................................................................................................2111.001000010
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAT...............................................................................................................................2411.001000010
..............................................................................................................................................CTTAGTACT------CGGGTTGATAATT...............................................................................................................................................................................2211.001000010
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGC..............................................................................................................................................................................2211.001000010
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATTT.................................................................................................................................2211.001000010
.....................................................................................................................................................................................................GTCATCGGGGGTATTATG..................................................................................................................................1811.001100000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAT...............................................................................................................................................................................2211.001000010
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGATT...............................................................................................................................2311.001000010
................................................................................................................................................TAGTACT------CGGGTTGATAAA................................................................................................................................................................................1911.001100000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTA....................................................................................................................................1911.001000010
....................................................................................................................................................................................................TGTCATCGGGGGTATTATT..................................................................................................................................1911.001000010
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGG.................................................................................................................................2111.001000010
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATT..................................................................................................................................2011.001000010
...............................................................................................................................................TTAGTACT------CGGGTTGATTT.................................................................................................................................................................................1930.672000011
droBip1
TGGCCAAC-------------------------------------------------------AATGT--CGGCCA--G-------GGTAA-AGTTAAATTTATTTC-------------------AATTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGAGCTATCCT----G--GAGCTGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAACACACCACAACGCATCG-GCCAATCGATC-------C--CACTAATCAATAT---------------------------------------------------ACGAGTTTTGTSizeHit CountTotal NormTotal
No Reads
dp5
TGTTCAA-------------------------------------------------------------------------------------AGTGAAATTGGTTTTCGTTTACGTTT-TTTTTTTGTTTTGGTTCTATGTTCTTAGTACT------TGGGTTGATAAAGACCACTCGTAGTGT--GAGAAGCCTTTGTCATCGCGGGTATTATGCAACATAGCTCAAAAGCGCAACAAAATACACA-A----------AA-----------------AATATACACGTAAATGTG--------TGTGGG---TGTGCGT----------GTGTGC-GGGTGTGTSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGA..............................................................................................................................................................................2216432.006432337020176223573612
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAG...............................................................................................................................................................................2114746.00474613201214385043101
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCA................................................................................................................................2212699.002699162804024456321680
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGC.................................................................................................................................2112545.00254511704031316021724
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATG..................................................................................................................................2012240.00224001101017353218560
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGT.................................................................................................................................211797.007970300036207290
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAA...............................................................................................................................231740.007401101045406790
...............................................................................................................................................TTAGTACT------TGGGTTGATAAA................................................................................................................................................................................201477.00477118020310203510
..............................................................................................................................................CTTAGTACT------TGGGTTGATAAAG...............................................................................................................................................................................221387.003870510021403650
...............................................................................................................................................TTAGTACT------TGGGTTGATAA.................................................................................................................................................................................191142.001421500011301220
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAT...............................................................................................................................231110.00110010001110970
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGAA.............................................................................................................................................................................23183.0083000000100730
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGC.................................................................................................................................22172.007200000060660
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTATG..................................................................................................................................21171.007100000170630
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGT..............................................................................................................................................................................22165.0065050001280310
...................................................................................................................................................................................................TTGTCATCGCGGGTATTAT...................................................................................................................................19151.005111000040450
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGCA................................................................................................................................23150.005001000050440
..............................................................................................................................................CTTAGTACT------TGGGTTGATAA.................................................................................................................................................................................20149.0049010002110350
................................................................................................................................................TAGTACT------TGGGTTGATAAAGA..............................................................................................................................................................................21147.004704000040390
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGT.................................................................................................................................22145.004500000020430
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCT................................................................................................................................22145.0045010001160270
...............................................................................................................................................TTAGTACT------TGGGTTGATA..................................................................................................................................................................................18127.002710000000260
................................................................................................................................................TAGTACT------TGGGTTGATAAAG...............................................................................................................................................................................20126.002603000000230
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGTT................................................................................................................................22125.002500000030220
..............................................................................................................................................CTTAGTACT------TGGGTTGATAAA................................................................................................................................................................................21124.002401000030200
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGAT.............................................................................................................................................................................23124.002400000050190
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATT..................................................................................................................................20120.002000000020180
..............................................................................................................................................CTTAGTACT------TGGGTTGATA..................................................................................................................................................................................19119.001911000060110
....................................................................................................................................................................................................TGTCATCGCGGGTATTATG..................................................................................................................................19119.001900000010180
..............................................................................................................................................CTTAGTACT------TGGGTTGATT..................................................................................................................................................................................19116.001611000010130
...............................................................................................................................................TTAGTACT------TGGGTTGATT..................................................................................................................................................................................18115.001500000000150
....................................................................................................................................................................................................TGTCATCGCGGGTATTATGC.................................................................................................................................20114.001401000020110
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAA...............................................................................................................................................................................21112.00120000003090
...................................................................................................................................................................................................TTGTCATCGCGGGTATTA....................................................................................................................................18112.001220000000100
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGAAA............................................................................................................................................................................24112.001200000010110
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGA.................................................................................................................................21111.001100000010100
....................................................................................................................................................................................................TGTCATCGCGGGTATTATGCA................................................................................................................................21111.00110200013050
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAAA..............................................................................................................................24110.001000000000100
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATTT.................................................................................................................................21110.00100000002080
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGTT.............................................................................................................................................................................23110.00100100004050
..............................................................................................................................................CTTAGTACT------TGGGTTGATAAAGA..............................................................................................................................................................................23110.001000000000100
..............................................................................................................................................CTTAGTACT------TGGGTTGATAAAGT..............................................................................................................................................................................2319.0090000006030
................................................................................................................................................TAGTACT------TGGGTTGATAAAGAC.............................................................................................................................................................................2218.0081100001050
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGTTT...............................................................................................................................2317.0070000000070
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCATT..............................................................................................................................2417.0070000001060
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAT...............................................................................................................................................................................2116.0060000002040
..............................................................................................................................................CTTAGTACT------TGGGTTGATTT.................................................................................................................................................................................2015.0050000002030
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAG...............................................................................................................................2315.0050000000050
.............................................................................................................................................TCTTAGTACT------TGGGTTGATA..................................................................................................................................................................................2015.0050000000050
....................................................................................................................................................................................................TGTCATCGCGGGTATTATGCAA...............................................................................................................................2215.0050000001040
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCATTT.............................................................................................................................2515.0050000000050
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTAT...................................................................................................................................2015.0050000001040
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATA..................................................................................................................................2014.0040000000040
.................................................................................................................................................AGTACT------TGGGTTGATAAAGA..............................................................................................................................................................................2014.0040000001030
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAAT..............................................................................................................................2414.0040000000040
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAATT.............................................................................................................................2514.0040000000040
.................................................................................................................................................AGTACT------TGGGTTGATAAAG...............................................................................................................................................................................1914.0040000000040
...............................................................................................................................................TTAGTACT------TGGGTTGATTT.................................................................................................................................................................................1923.0060000011040
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCTCA..............................................................................................................................2413.0030000000030
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGAAT............................................................................................................................................................................2413.0030000000030
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTAA...................................................................................................................................2013.0030000000030
................................................................................................................................................TAGTACT------TGGGTTGATAAA................................................................................................................................................................................1913.0030100000020
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTA....................................................................................................................................1913.0030000000030
...............................................................................................................................................TTAGTACT------TGGGTTGATAAT................................................................................................................................................................................2013.0030000002010
................................................................................................................................................TAGTACT------TGGGTTGATAAAGACT............................................................................................................................................................................2313.0030000001020
...............................................................................................................................................TTAGTACT------TGGGTTGATAAG................................................................................................................................................................................2013.0030000000030
................................................................................................................................................TAGTACT------TGGGTTGATAA.................................................................................................................................................................................1813.0030000000030
....................................................................................................................................................................................................TGTCATCGCGGGTATTATGT.................................................................................................................................2013.0030000001020
....................................................................................................................................................................................................TGTCATCGCGGGTATTATGCAT...............................................................................................................................2212.0020000001010
...................................................................................................................................................................................................TTGTCATCGCGGGTATT.....................................................................................................................................1712.0020000000020
.............................................................................................................................................TCTTAGTACT------TGGGTTGATAA.................................................................................................................................................................................2112.0020000001010
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAAGC.............................................................................................................................2512.0020000000020
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGAG.............................................................................................................................................................................2312.0020000001010
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGTAA............................................................................................................................................................................2412.0020000000020
...............................................................................................................................................TTAGTACT------TGGGTTGATATT................................................................................................................................................................................2012.0020100000010
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAC...............................................................................................................................................................................2112.0020001001000
..............................................................................................................................................CTTAGTACT------TGGGTTGATTTT................................................................................................................................................................................2121.5030000001020
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGCT................................................................................................................................2311.0010000001000
....................................................................................................................................................ACT------TGGGTTGATAAAG...............................................................................................................................................................................1611.0010000000010
..............................................................................................................................................CTTAGTACT------TGGGTTGATAAT................................................................................................................................................................................2111.0010000001000
...............................................................................................................................................TTAGTACT------TGGGTTGATAAATT..............................................................................................................................................................................2211.0010000000010
........................................................................................................................TTTTTTGTTTTGGTTCTATGTT...........................................................................................................................................................................................................2211.0010000000010
...............................................................................................................................................TTAGTACT------TGGGTTGATAT.................................................................................................................................................................................1911.0010000000010
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGG.................................................................................................................................2111.0010000000010
..............................................................................................................................................CTTAGTACT------TGGGTTGAT...................................................................................................................................................................................1811.0010000000010
...............................................................................................................................................TTAGTACT------TGGGTTGATG..................................................................................................................................................................................1811.0010000000010
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATAT.................................................................................................................................2111.0010000000010
...............................................................................................................................................TTAGTACT------TGGGTTGATAAGTG..............................................................................................................................................................................2211.0010000000010
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAATC.............................................................................................................................2511.0010000000010
...................................................................................................................TTT-TTTTTTTGTTTTGGTTCTATGTT...........................................................................................................................................................................................................2611.0010000000010
...............................................................................................................................................TTAGTACT------TGGGTTGATAATT...............................................................................................................................................................................2111.0010000000010
.................................................................................................................................................................................................CTTTGTCATCGCGGGTATTATG..................................................................................................................................2211.0010000001000
.............................................................................................................................................TCTTAGTACT------TGGGTTGATAAA................................................................................................................................................................................2211.0010000000010
..................................................................................................................................................................................................TTTGTCATCGCGGGTATT.....................................................................................................................................1811.0010000000010
....................................................................................................................................................ACT------TGGGTTGATAAAGA..............................................................................................................................................................................1711.0010000000010
..............................................................................................................................................CTTAGTACT------TGGGTTGATAAAT...............................................................................................................................................................................2211.0010000001000
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGG..............................................................................................................................................................................2211.0010100000000
..............................................................................................................................................CTTAGTACT------TGGGTTGATAT.................................................................................................................................................................................2011.0010000000010
..............................................................................................................................................CTTAGTACT------TGGGTTGATAAAGTT.............................................................................................................................................................................2411.0010000001000
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGACC............................................................................................................................................................................2411.0010001000000
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGTGT............................................................................................................................................................................2411.0010000000010
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCACT..............................................................................................................................2411.0010000000010
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGC..............................................................................................................................................................................2211.0010000001000
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGTC................................................................................................................................2211.0010000000010
..................................................................................................................................................................................................TTTGTCATCGCGGGT........................................................................................................................................1511.0010000000010
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCTT...............................................................................................................................2311.0010000000010
...................................................................................................................................................TACT------TGGGTTGATAAAG...............................................................................................................................................................................1711.0010000000010
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCG................................................................................................................................2211.0010000000010
...............................................................................................................................................TTAGTACT------TGGGTTGATAAGA...............................................................................................................................................................................2111.0010000000010
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGTTT...............................................................................................................................2411.0010000000010
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGA.................................................................................................................................2211.0010000000010
.....................................................................................................................................................................................................GTCATCGCGGGTATTATGCA................................................................................................................................2011.0010000001000
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGCAA...............................................................................................................................2411.0010000000010
droPer2
TGTTCAA-------------------------------------------------------------------------------------AGTGAAATTGGTTTTCGTTCACGTTTTTTTTTTTGTTTTGGTTCTATGTTCTTAGTACT------TGGGTTGATAAAGACCACTCGTAGTGT--GAGAAGCCTTTGTCATCGCGGGTATTATGCAACATAGCTCAAAAGCGCAACAAAATACACA-A----------AA-----------------AATATACACGTAAATGTG--------TGTGGG----------------------TGTGCGGGTGTGTSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGA..............................................................................................................................................................................2211715.001715020301710
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAG...............................................................................................................................................................................2111028.001028030001025
...............................................................................................................................................TTAGTACT------TGGGTTGATAAA................................................................................................................................................................................201305.0030501011302
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATG..................................................................................................................................201194.0019403040187
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGC.................................................................................................................................211155.0015505041145
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCA................................................................................................................................221130.0013014022121
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGT..............................................................................................................................................................................221119.0011900000119
...............................................................................................................................................TTAGTACT------TGGGTTGATAA.................................................................................................................................................................................191100.0010000000100
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGT.................................................................................................................................21154.00540100053
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGAT.............................................................................................................................................................................23132.00320000032
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGAA.............................................................................................................................................................................23121.00210000021
..............................................................................................................................................CTTAGTACT------TGGGTTGATT..................................................................................................................................................................................19117.00170000017
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGTT.............................................................................................................................................................................23112.00120000012
..............................................................................................................................................CTTAGTACT------TGGGTTGATAAAG...............................................................................................................................................................................22112.00120000012
..............................................................................................................................................CTTAGTACT------TGGGTTGATAA.................................................................................................................................................................................20111.00110000011
..............................................................................................................................................CTTAGTACT------TGGGTTGATA..................................................................................................................................................................................19111.00110000011
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAA...............................................................................................................................2319.009010107
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAT...............................................................................................................................................................................2118.008000008
..............................................................................................................................................CTTAGTACT------TGGGTTGATTT.................................................................................................................................................................................2018.008000107
...............................................................................................................................................TTAGTACT------TGGGTTGATTT.................................................................................................................................................................................1938.00240000024
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAA...............................................................................................................................................................................2118.008000008
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGT.................................................................................................................................2216.006000006
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTATG..................................................................................................................................2116.006000006
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCT................................................................................................................................2215.005000005
..............................................................................................................................................CTTAGTACT------TGGGTTGATAAAGT..............................................................................................................................................................................2315.005000005
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAT...............................................................................................................................2314.004000004
...............................................................................................................................................TTAGTACT------TGGGTTGATA..................................................................................................................................................................................1814.004000013
...............................................................................................................................................TTAGTACT------TGGGTTGATAAT................................................................................................................................................................................2014.004000004
...................................................................................................................................................................................................TTGTCATCGCGGGTATTAT...................................................................................................................................1913.003000003
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGA.................................................................................................................................2113.003000003
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGATT............................................................................................................................................................................2413.003000003
..............................................................................................................................................CTTAGTACT------TGGGTTGATAAA................................................................................................................................................................................2112.002000002
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTAT...................................................................................................................................2012.002000002
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGCA................................................................................................................................2312.002000002
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGC.................................................................................................................................2212.002000002
..............................................................................................................................................CTTAGTACT------TGGGTTGATAAT................................................................................................................................................................................2112.002000002
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGC..............................................................................................................................................................................2212.002000002
...............................................................................................................................................TTAGTACT------TGGGTTGATAAG................................................................................................................................................................................2012.002000002
...............................................................................................................................................TTAGTACT------TGGGTTGATAT.................................................................................................................................................................................1912.002000002
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGAAT............................................................................................................................................................................2412.002000002
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGAG.............................................................................................................................................................................2312.002000002
..........................................................................................................................................................................ACCACTCGTAGTGT--GAGAAGCCT......................................................................................................................................................2311.001000001
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATAT.................................................................................................................................2111.001000001
.............................................................................................................................................TCTTAGTACT------TGGGTTGATA..................................................................................................................................................................................2011.001000001
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGG..............................................................................................................................................................................2211.001000001
..................................................................................................................................................................................................TTTGTCATCGCGGGTATTA....................................................................................................................................1911.001000001
...............................................................................................................................................TTAGTACT------TGGGTTGATT..................................................................................................................................................................................1811.001000001
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAC...............................................................................................................................................................................2111.001000001
....................................................................................................................................................................................................TGTCATCGCGGGTATTATG..................................................................................................................................1911.001010000
...............................................................................................................................................TTAGTACT------TGGGTTGATAAAGAAA............................................................................................................................................................................2411.001000001
....................................................................................................................................................................................................TGTCATCGCGGGTATTATGCT................................................................................................................................2111.001010000
...................................................................................................................................................................................................TTGTCATCGCGGGTATTATGTT................................................................................................................................2211.001000001
...............................................................................................................................................TTAGTACT------TGGGTTGATAAATT..............................................................................................................................................................................2211.001000001
....................................................................................................................................................................................................TGTCATCGCGGGTATTATGCA................................................................................................................................2111.001010000
...............................................................................................................................................TTAGTACT------TGGGTTGATAAGA...............................................................................................................................................................................2111.001000001
...............................................................................................................................................TTAGTACT------TGGGTTGATAATT...............................................................................................................................................................................2111.001000001
....................................................................................................................................................................................................TGTCATCGCGGGTATTATGT.................................................................................................................................2011.001000001
................................................................................................................................................TAGTACT------TGGGTTGATAAAGACT............................................................................................................................................................................2311.001000001
....................................................................................................................................................................................................TGTCATCGCGGGTATTATGCAA...............................................................................................................................2211.001000001
................................................................................................................................................TAGTACT------TGGGTTGATAAAGA..............................................................................................................................................................................2111.001000001
..............................................................................................................................................CTTAGTACT------TGGGTTGATTTT................................................................................................................................................................................2130.672000002
droWil2
TGCAAAAA---CAGT------------------------------------------------------------------------TTAG-TGAAAAAGTGACTTA-------------------AGTTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACAAAATGT---TTACCAATCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAGTTCAACATAATAATTA-A----------GAATTAACTTTGAAT------TGGAA-----------ACGATATT------GA---------------------AAT-GAATTTATSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................227156.5710964489315459
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................21796.14673445853446
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGA.................................................................................................................................21746.143231372691420
...............................................................................................................................................TTAGTACT------CGGGTTGATAAA................................................................................................................................................................................20729.00203362148413
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGA.................................................................................................................................2277.8655024337
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGA.................................................................................................................................2077.8655204922
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATG..................................................................................................................................2077.2951034521
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................2275.5739003432
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAA................................................................................................................................2275.29371222210
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAA.............................................................................................................................................................................2375.1436203112
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAA...............................................................................................................................2375.00351202120
...............................................................................................................................................TTAGTACT------CGGGTTGATAA.................................................................................................................................................................................1974.71331011822
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAA...............................................................................................................................................................................2173.5725401425
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTAT...................................................................................................................................2072.4317120500
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................2372.2916011401
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATG..................................................................................................................................2171.7112001020
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAA................................................................................................................................2371.571130521
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAA................................................................................................................................................................................2171.5711001100
..............................................................................................................................................CTTAGTACT------CGGGTTGATAA.................................................................................................................................................................................2071.431010900
...................................................................................................................................................................................................TTGTCATCGGGGGTATTAT...................................................................................................................................1971.431090100
..............................................................................................................................................CTTAGTACT------CGGGTTGATA..................................................................................................................................................................................1971.00700412
...............................................................................................................................................TTAGTACT------CGGGTTGATA..................................................................................................................................................................................1870.86650010
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATC..................................................................................................................................2170.71520111
...............................................................................................................................................TTAGTACT------CGGGTTGATC..................................................................................................................................................................................1870.71540001
...................................................................................................................................................................................................TTGTCATCGGGGGTATTA....................................................................................................................................1870.71550000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATG..................................................................................................................................1970.57430100
................................................................................................................................................TAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................2170.57400301
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAA...............................................................................................................................2470.57412100
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGT..............................................................................................................................................................................2270.57400400
...............................................................................................................................................TTAGTACT------CGGGTTGATAAGA...............................................................................................................................................................................2170.43300201
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGT.................................................................................................................................2170.43301200
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAA................................................................................................................................2170.43300300
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAA..............................................................................................................................2470.43330000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGG..............................................................................................................................................................................2270.43320100
................................................................................................................................................TAGTACT------CGGGTTGATAAAGAA.............................................................................................................................................................................2270.43302100
...............................................................................................................................................TTAGTACT------CGGGTTGATAAG................................................................................................................................................................................2070.43300300
...............................................................................................................................................TTAGTACT------CGGGTTGATCC.................................................................................................................................................................................1980.38300003
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAA...............................................................................................................................2270.29200200
..............................................................................................................................................CTTAGTACT------CGGGTTGATC..................................................................................................................................................................................1970.29200101
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATC..................................................................................................................................2070.29210001
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGC..............................................................................................................................................................................2270.29200011
...............................................................................................................................................TTAGTACT------CGGGTTGATT..................................................................................................................................................................................1870.29210001
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAT.............................................................................................................................................................................2370.29200200
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAC.............................................................................................................................................................................2370.29210010
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATCCC................................................................................................................................2370.29200002
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAG...............................................................................................................................2270.29200200
...............................................................................................................................................TTAGTACT------CGGGTTGATAT.................................................................................................................................................................................1990.22200101
...........................................................................................................................................ATTCTTAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................2550.20101000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAC................................................................................................................................2270.14110000
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAGAG.............................................................................................................................................................................2370.14100100
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGG.................................................................................................................................2270.14110000
..................................................................................................................................................GTACT------CGGGTTGATAAAGACAAAAT........................................................................................................................................................................2570.14101000
.....................................................................................................................................................................................................GTCATCGGGGGTATTATGA.................................................................................................................................1970.14100100
...............................................................................................................................................TTAGTACT------CGGGTTGATAAAT...............................................................................................................................................................................2170.14100010
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAAA..............................................................................................................................2570.14110000
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAATATAGC.........................................................................................................................2870.14101000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATT.....................................................................................................................................1870.14110000
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAC...............................................................................................................................2370.14110000
..................................................................................................................................................................................................TTTGTCATCGGGGGTATTATA..................................................................................................................................2170.14100010
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGAT................................................................................................................................2170.14100100
..............................................................................................................................................CTTAGTACT------CGGGTTGATAAAGT..............................................................................................................................................................................2370.14100100
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGG.................................................................................................................................2070.14110000
..............................................................................................................................................CTTAGTACT------CGGGTTGATT..................................................................................................................................................................................1970.14110000
...............................................................................................................................................TTAGTACT------CGGGTTGATG..................................................................................................................................................................................1870.14100001
................................................................................................................................................TAGTACT------CGGGTTGATAAAA...............................................................................................................................................................................2070.14110000
...................................................................................................................................................TACT------CGGGTTGATAAAGACAAAATGT---T..................................................................................................................................................................2770.14101000
................................................................................................................................................TAGTACT------CGGGTTGATAAAG...............................................................................................................................................................................2070.14100100
...................................................................................................................................................................................................TTGTCATCGGGGGTATTC....................................................................................................................................1870.14101000
..............................................................................................................................................CTTAGTACT------CGGGTTGATAATA...............................................................................................................................................................................2270.14100100
...................................................................................................................................................................................................TTGTCATCGGGGGTATTAA...................................................................................................................................1970.14100100
.............................................................................................................................................TCTTAGTACT------CGGGTTGATAAAGA..............................................................................................................................................................................2470.14100100
...................................................................................................................................................TACT------CGGGTTGATAAAGA..............................................................................................................................................................................1870.14100001
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATCC.................................................................................................................................2170.14100100
....................................................................................................................................................................................................TGTCATCGGGGGTATTATGC.................................................................................................................................2070.14100100
...................................................................................................................................................................................................TTGTCATCGGGGGTATTATT..................................................................................................................................2070.14101000
...............................................................................................................................................TTAGTACT------CGGGTTGATTTC................................................................................................................................................................................20200.10200101
droVir3
TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
No Reads
droMoj3
AGAAATGT---GG----------GG---------------------------------CT---------------------------CTGA-TGTAATAAGTGTTTT-------------------AGCTTTAAGTTGTGCCATTTTAA-----------ATTGAAAAA-----------------------------------------------AGTGAAGATTGA--------------------------------------------------------------------------------------------------------AAATTGACTAAGTSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
No Reads
droGri2
TGTAAAAC----GGTAA-GGAGTGATGCATGTAATGGCAAAAATACCTCAAAGAGTAGCAGGAG---------------------TAGTTAAGTTGTAGTTTCTTAC-------GGTTTTTTTTTTAATAACATGC------TTTAGTGCTTCAATGTAGGTGGCTCAAGATATTTGT-----T--GATTGGCCTTGG-----------------------------------------------------------------------------------------------------------------------------------------------TTATSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
No Reads

Generated: 10/20/2015 at 06:45 PM