ID:

dya_263

 Coordinate:

2L:8884710-8884860 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.5 -26.5 -26.2 -26.1

Flybase annnotation

exon [dyak_GLEANR_1253:3]; CDS [Dyak\GE12261-cds]; intron [Dyak\GE12261-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+
mature
  1. 3L:14916190-14916214 -
  2. 3L:24108197-24108221 -
  3. dya_263  2L:8884744-8884768 -
  4. 2L:20431902-20431926 -
  5. 2R:3754727-3754751 -
  6. X:1730631-1730655 -
  7. 3R:6800916-6800940 -
  8. 4:34112-34136 -
  9. 4:298308-298332 -
  10. v2_chrUn_1092:3175-3199 -
  11. v2_chrUn_4206:265645-265669 -
  12. v2_chrUn_5271:4617-4641 -
  13. chr2h:14034-14058 -
  14. chr2h:672276-672300 -
  15. v2_chr2L_random_002:111529-111553 -
  16. v2_chr2L_random_001:310398-310422 -
  17. v2_chr2L_random_028:678494-678518 -
  18. v2_chrUn_001:428446-428470 -
  19. v2_chrUn_004:409649-409673 -
  20. v2_chrUn_004:501992-502016 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGGGCAGATACACGCATTCAGCTTCAACGATCGCAATGTGGTAGCTCACGGTAGGTTGAAGATTTTAATTTTCAAATAGTTATGAAAAGCATAGAAAAAACAAGAGAGAACGCTATAGTCGAGTTCCCCGACTATCTGATACCCGTTACTCAGCTAGTGTAAGTGCGAAGGACAGTTTTTGGCGGTTTGTGGGCGTTAGAGTGGGCGTGGCCAAAAGTTTTTTGGCGGATAGATAGAAATTTACAAGACTA
**************************************************............(((((((...(((((.((((.(((..((((.......((.((.(((((((..(((((((.......)))))))........)))).)))..)).))....)))).........))).)))).))))).....)))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M026
head
 M056
embryo
 M043
female body
.........................................................................AAATAGTCACGCAAAGCAT............................................................................................................................................................... 19 3 20 3.75 75 61 14 0
...........................................................................................................................................................................................TGTGGGCGTTAGAGTGGGC............................................. 19 0 20 0.45 9 0 0 9
..............................................................................................................................................CCGTTACTCAGCTAGTGTAAGTGCG.................................................................................... 25 0 20 0.15 3 0 0 3
.......................................................................................................................................................................................GGTTTGTGGGCGTTAGAGTGGGC............................................. 23 0 20 0.05 1 1 0 0
.......................................................................................................................................................................................GGTTTGTGGGCGTTAGAGTGGG.............................................. 22 0 20 0.05 1 0 1 0
..........................................................................................................................................................................................................GGGCGTGGCCAAAAGTTTTTTGG.......................... 23 0 20 0.05 1 0 1 0
.....................................................TGATGAAGATTTTAATTTT................................................................................................................................................................................... 19 2 20 0.05 1 0 0 1

Anti-sense strand reads

CCCCGTCTATGTGCGTAAGTCGAAGTTGCTAGCGTTACACCATCGAGTGCCATCCAACTTCTAAAATTAAAAGTTTATCAATACTTTTCGTATCTTTTTTGTTCTCTCTTGCGATATCAGCTCAAGGGGCTGATAGACTATGGGCAATGAGTCGATCACATTCACGCTTCCTGTCAAAAACCGCCAAACACCCGCAATCTCACCCGCACCGGTTTTCAAAAAACCGCCTATCTATCTTTAAATGTTCTGAT
**************************************************............(((((((...(((((.((((.(((..((((.......((.((.(((((((..(((((((.......)))))))........)))).)))..)).))....)))).........))).)))).))))).....)))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 V058
head
 V120
male body		 GSM1528802
follicle cells		 M026
head
...................................................................................................TGTTCTCTCTTGCGATATCAGCTC................................................................................................................................ 24 0 20 5.45 109 103 0 0 6 0 0
.............................................................................................................................................................................................ACCCGCAATCTCACCCGCACC......................................... 21 0 20 3.45 69 69 0 0 0 0 0
...........................................................................................................................AAGGGGCTGATAGACTATGGGCAAT....................................................................................................... 25 0 20 0.70 14 14 0 0 0 0 0
............................CTCGCGTTATACCATCGA............................................................................................................................................................................................................. 18 2 2 0.50 1 0 0 1 0 0 0
.......................................................................................................................................GACTATGGGCAATGAGTCGATCACAT.......................................................................................... 26 0 20 0.45 9 9 0 0 0 0 0
.................................................CCATCTAACTTATAAAATGAAAA................................................................................................................................................................................... 23 3 5 0.20 1 0 1 0 0 0 0
................................................................................................TTTTGTTCTCTCTTGCGATATCAG................................................................................................................................... 24 0 20 0.20 4 0 4 0 0 0 0
.................TGGCAAAGTTGCTAGCGTTA...................................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 1 0 0
..............................................................................................................................................................................................CCCGCAATCTCACCCGCACCGGT...................................... 23 0 20 0.15 3 0 3 0 0 0 0
..........................................................................................................................................................................CTGTCAAAAACCGCCAAACAC............................................................ 21 0 20 0.10 2 2 0 0 0 0 0
......................................................................................................................................................................................................CTCACCCGCACCGGTTTTCAAAAAACCGC........................ 29 0 20 0.10 2 0 2 0 0 0 0
........................................................................................................................................................CGATCACATTCACGCTTCCTGTCAA.......................................................................... 25 0 20 0.10 2 2 0 0 0 0 0
........................................................................................................................................................CGATCACATTCACGCTTCCTGTCAAAAAC...................................................................... 29 0 20 0.10 2 0 2 0 0 0 0
.....................................................................................TTTGGTATCTTTCTTGTTC................................................................................................................................................... 19 2 13 0.08 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................ACCGCCTATCTATCC.............. 15 1 20 0.05 1 0 0 0 0 1 0
...........................................................................................................................................................................................................CCGCACCGTTTTTCAAAAAACCGCCT...................... 26 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................GATCACATTCACGCTTCCTGTCAAAA........................................................................ 26 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................TGTTCTCTCTTGCGATATCAGCTCA............................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................................CCGCAATCTCACCCGCACCGG....................................... 21 0 20 0.05 1 0 0 0 0 0 1
.......................................................................................................................................................TCGATCACATTCACGCTTCCTGTCAAAAA....................................................................... 29 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................TCAGCTCAAGGGGCTGATAGACTA............................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 1
.................................................................................................................................................................TCACGCTTCCTGTCAAAAGCCGCCAA................................................................ 26 1 20 0.05 1 0 0 0 0 1 0
.......................................................................................................................................................................................................TCACCCGCACCGGTTTTCAAAAA............................. 23 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................................CACCCGCACCGGTTTTCAAAAAACCTC........................ 27 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................GTCGATCACATTCACGCTTCCTGTCAA.......................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................TCACATTCACGCTTCCTGTCA........................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................TGGGCAATGAGTCGATCACATTCA....................................................................................... 24 0 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2L:8884660-8884910 - dya_263 GGGGCAGATACA-CGCATTCAGCTTCAACGATCGCAATGTGGTAGCTCA-----------------------------CGG------T--AGGTTGA------------AG------AT-------TTTAATTTTC--AAA-TAG---TTATGAAA-AGCA---T--------AGA-------------AAAAACA--AGAG-AGAACGCTATAGT------CGAGTT----CCCCGACTATCT---GATACCCGTTACTCAGCTAGTGTAAGTG-----CG----AAGGA-CA------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------TTTTTGGCGG-T------------------------TTGTG-GG---------------------------------------------------CGTTAGAGTGGGCGTGGCCAAAAGTTTTTT--GGCGGA-------------T----------------AGAT----AGAA-----ATTTACAAGACTA
droEre2 scaffold_4845:3196020-3196251 - GGGG---------C---------------------------------GA-----ATATATAGGTTAACTAGCCACCATTAGCAACACACAATTTTAA------------AG------AT-------CTCTATT-------A-CAA-----------------------------ACTTTAACAAAAGAAAAAAACA--AGAT-AGAACGCTATAGT------CGAGTT----CCCCGACTATCA---GATAATTAA---GAAACAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAA--CT-----------------------------------------TTTTTCA-A------------------------AAGTG-CGGGCGTG------ACAGTTT--------------------------------TGGTAGAGTGGACGCGGCAAAAAGTTTTTT--GGCAAA-------------C----------------TTAT----AGAA-----ATTTACAAAATAC
droSec2 scaffold_5436:542-764 + ACAG---------T---------------------------------AA-----ATATA--------------------------------------------------AA------AG-------TTTAAGTTAG--AAG-T------AGTCAACAAACATTGCATTGTTAAA---------------TAA--CAAACGAG-AGAATGCTGTTGT------CGAGTT----CCTTGACTATCA---GATATCCGTTACGCAGCTAGTGTGAATG-----CG----AACGC-GAAATTTCCTGATTTTT------------------------------------------------------------------------------------------------------------------------------------C----------------TGG--------------------------------TCGG-T------------------------TTTTGTGG---------------------------------------------------CG-TTGAGTGGACGTGGCAAAAATTCTTTT--TGGAAA-------------T----------------CGAT----AGAA-----ATTTACAAGATTA
droSim2 node_27568:51-252 + TGGA---------C---------------------------------CACAGTG-----CATGGAAGGAATCTAGCTTCGGCAAGCC----------------------------------------------ATTAA---AGTAATT-G-----------------------TTC-------------AGGAACA--AGAG-ATAATGCTATAGT------CGAGTT----CCCCGAGTATCA---GGTACCCGTTATTCAGCTAGGCGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGGTTTCGTGG-C------------------------TTTAG-GG---------------------------------------------------CGTTAGAGTGGGCGGGGCAAAAAGTTTTTT--GGCAAT-------------T----------------CGAT----AGAA-----ATTTAAGCGACTA
dm3 chr3RHet:1825195-1825479 - CAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACCCGTTACTCTGCTTGTGCGATTG-----CG----AACGC-GAAATTTTATAATTATTCTGGGATATCGACAGATAGTGGGGAATAACATAAGAAAAAATTGTGGGAATGGGTGTGGCAAAAAGTTTTTTAGCAAATCGATATATAATTACACAACTAATAAAATTATGAAAGAATATCTAACAATT---TT--GATTGTTTGTTTG---ATTG-------TTTG--------ATCGTTTCTGAGC-T------------------------TATAG-GG---------------------------------------------------CGTTATTGTAGGCGTGGCAAAAAGTTGTTT--GGCAAA-------------T----------------CGAT----AGAA-----ATTTACAAGACTA
droEug1 scf7180000409758:80379-80595 + ATTG---------A-------GTTTTAGCAACCTTAAT-CGATTGTTGA-----------------------------AGA------T--AGG--AAA-TTCTTTAATTATTGATTGATTG------------------------------TACCA-TTCC------------ATG-------------ACTAACA--AGAG-GAAACGCTATAAT------CGAGTG----CCGCGACTATAA---GATACCCGTTACTGTTTTACACAATTTT-----AA----AA-TA-TT------------------------------------------------------------------------------------------------------------------------------------------------GATTTTG--CT---------------A-------TTGGA---------------------------------------------------------------------------------------------------------------AATTGCCCAAGCGCCAACCATTTT--CGGA---------------------------------GAA----AGCA-----TGTTGAGTAACCG
droBia1 scf7180000301241:11663-11853 + CATT---------GT--------------------------------CA--------------------------------------------------------------------ATTTAAAAATTTAA----------TA-AAATTTATAA------------------------------AAAAAAAAAACA--AGGA-AGAACTCTATAGT------CTAGTG----CCTCGACTATCA---GATACCCGTTACTCTGTTTAAGGGAGCAAAAGGATAATGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCG-T------------------------TTGTG-TG---------------------------------------------------CGTTAAAGTGGCCGTGGCACAT--TTTT-----GTAAG-------------C------AG---CAAAGCTAT-------A-----TTTTATGGCGCCA
droTak1 scf7180000414484:14450-14667 + GAGG-AGGTGGG-CGCATTCAA-------------AATTTTA-AAGTCA-----------------------------CAG------CAAAGTTTAA------------AA------AT-------CTTCATTTGT--GAA-CAG---CGTTTAAAAA--------------------------TTAAATAAAACA--AGAG-AGAACGCTATAGT------CGGGTTGTTGTCCCGACTATCT---AATACCCGTCACTCAGCTAAAGGGAGTG-----CG----AACGC------------------------------------------------------------------------------------------------------------------------------------------------------T----------------GTGTCGGGTTGGTG------------------------T-CCCGACTAATAATCGTAACTCAGCTA--------------------------------------------------------------------------------------------------------------------------------------AAGG-----GAGTGCGAG---G
droEle1 scf7180000489368:3714-3901 - AATA---------A---------------------------------TA-----T----------------------------------------------------------------------------------------------------------------------AAA-------------TCAAACA--AGAA-GAAACGATATAGT------CGAGTT----CCTCGACTTTTA---GACACCCGTTACTCAGTTAACCAATTTG-----AA----AACCCAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTCGCGATT------------------------TTTTA-GG---------------------------------------------------AGTTAGAGTGGGCGTGGCCAC--GTTTTTA--AATAAA-------------CTTTCGTTGCGTAGGAATAAC---TATAATCTGCATGTGAAAGCCTA
droRho1 scf7180000779410:51342-51599 - TACA---------CGCATC-----TCAATGAA---------------TACAGTA-----CGGTGAAAAAATGTGGT--AAT------C--AGA--AAGTTTATCTAATTGGT-TTTACTTG------------------------------TGACA-ATCA---A--------AGC-------------CTAAACA--AGAG-AGAACGCTATAGT------CGGGTG----CCCCGACTATCA---GATACCCGTTACTCAGGTAAAGGGAGTG-----CG----AGGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGGAGATAGAA--------ACTTTGATCACGCATAACTTTTTAACG--AATGGTCCGATTTGAAAAATTTCTTC--TACATT-------------T----------------CGAT----AGGT-----ATTGATCAACACA
droFic1 scf7180000453906:655483-655632 - AAAG---------G---------------------------------CT-----A----------------------------------------------------------------------------------------------------CAAAAACCGA--------AA---------TAAAATCAAATA--AGAG-AGATCGCTATAGT------CTAGTG----CATCGACTATCA---GATACCCATTCCTCAATTAAACAATAGG-----AGATGATAC------------------GC------------------------------------------------------------------------------------------------------------------------------------C----------------CCA--------------------------------TAGG-G------------------------TGGTG-TG---------------------------------------------------CGTAATAGTGAGCGTGGCACAAATGCTT----------------------------------------------------------------------
droKik1 scf7180000302682:1553080-1553146 - AAGC---------T---------------------------------GA-----AA-----------------------------------------------------------------------------------------------------------------------A-------------AAAACAA--AGAA-AGAACGCCATTGT------CGAGTG----CCCCGAATATGA---GATACCCGGCACTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12943:3963885-3963988 - TAGA---------T---------------------------------TA-----AAA----------------------------------------------------AGTGATTAATTTAACTATTTTA----------TA-A---------GG-ATTT---A--------AAA-------------TTTAACAAAAGAAAGGATATCTATAGT------AGAGTT----ACTCGACTGTAT---GTTACCCGGTACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396292:21532-21699 + AGAA---------T---------------------------------AA-----A----------------------------------------------------------------------------------------------------------------------AAA-------------TTAAACA--AGAAAATACGGCTTTATT------CCAGTT----TCCCGACTATAT---TATACCCGGTACTCATCTCATATCCATA-----AT----TAAAC-TA------------------------------------------------------------------------------------------------------------------------------------------------A-------------------------------------------------CCTTTAT---A------------------------GTTTA-AA---------------------------------------------------CTTTAGAGCAGGTGTGCCCAAACGCTGCTT--ACGA---------------------------CGGAGAAATTCCAATAA-----ATTCAAAAG---A
dp5 XL_group1a:3607101-3607223 - TAGC---------T---------------------------------CA-----TA----------------------------------------A------------AA------AA-------CTAAATTTTTGA---AAAGAAT-GCCCAAAAAGCA---A--------AGA-------------AAAAACG--AGGG-GGAACGTTGTGAGTTGCTGCGGACA----CCGCAACTCTACAGTTATACCCGATACTAAGTCAGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_14:1093028-1093137 - TATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT------CATCTT----CTACGATTCTGC---GATTTTAGTTTTCTCGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGTCGAAATTGTGGATGCCACAGATTTTCGCCC-T------------------------TTGTG-GG---------------------------------------------------GGCGGAAGTGGGCGGGGCAAA--GTTTT----------------------------------------------------------------------
droWil2 scf2_1100000004943:121395-121585 - ACCT---------T-------------------------------------------------------------------------------------------------------------------AATGTAC--AAA-GAG---CGGTAAAA-AAAA---A--------AAA-------------AAAAACA--AAAA-AAAAAAC----------------CA----CCCCAATTGATG---AATGCTTGTATGTTAGAAAGAGACAGCG-----TG----GAGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGCGAACAGTATAGAGAGAA------------------------CCCTGAAGTTTGCGTGGCAAAGAGGCTGGA--AGCGCAAAGAGATTGACGAT----------------CGTT----GGAA-----TTTTGCAAA---A
droVir3 scaffold_13049:24447695-24447753 + GA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAACA--AATG-AGAACGCTTTAGT------CGAGTG---TTCTCGACTACTA---AATATCCTCTACCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:11655535-11655690 + TTTC-AAATAATAA---------------------------------TA-----G----------------------------------------------------------------------------------------------------------------------AAA-------------ATAAACA--AGTA-AGAAAACTCTAGT------CAAGAG---TGCACGACTAGAT---ACTACCCTGAGCCCAACTAATAAAAATA-----CC----CAT--------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------AGTATGGCTAAAA--------------------------------------------------------------------------------------------------------------TTTCAATTTCGATGTAT------------T--TAAATA-------------T----------------AAAA----AATG-----AAGTACAAAACTC
droGri2 scaffold_14853:1808160-1808363 + AAAG---------G---------------------------------TA-----G----------------------------------------------------------------------------------------------------------------------AAG-------------AAAAAGA--GGAG-AGAACCTTACAGT------CGGGCG---TAACCGACTGCGA---AATACTCTGATTCCCATAAGTAATACCA-----TC----TAA------------------------------------------------------------------------------------------------------------------------------------------------AACTG---AT--AACTGT-----------AGCTCTCAAATTGCGAGAGATATGGACTTTTATCG-T------------------------TATTG-GG---------------------------------------------------GGCAGGTGTAGGTGTGGTCCAAAATGTTTGTGAAGA---------------G-------------TGTTACT----TGTA-----ATACACATAACTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
GGGGCAGATACA-CGCATTCAGCTTCAACGATCGCAATGTGGTAGCTCA-----------------------------CGG------T--AGGTTGA------------AG------AT-------TTTAATTTTC--AAA-TAG---TTATGAAA-AGCA---T--------AGA-------------AAAAACA--AGAG-AGAACGCTATAGT------CGAGTT----CCCCGACTATCT---GATACCCGTTACTCAGCTAGTGTAAGTG-----CG----AAGGA-CA------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------TTTTTGGCGG-T------------------------TTGTG-GG---------------------------------------------------CGTTAGAGTGGGCGTGGCCAAAAGTTTTTT--GGCGGA-------------T----------------AGAT----AGAA-----ATTTACAAGACTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTG-GG---------------------------------------------------CGTTAGAGTGGGC.....................................................................................19200.45909000000000
............................................................................................................................................................................................................................................................CCGTTACTCAGCTAGTGTAAGTG-----CG----..........................................................................................................................................................................................................................................................................................................................................................................................................25200.15303000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-T------------------------TTGTG-GG---------------------------------------------------CGTTAGAGTGGGC.....................................................................................23200.05110000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-T------------------------TTGTG-GG---------------------------------------------------CGTTAGAGTGGG......................................................................................22200.05100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGTGGCCAAAAGTTTTTT--GG................................................................23200.05100100000000
droEre2
GGGG---------C---------------------------------GA-----ATATATAGGTTAACTAGCCACCATTAGCAACACACAATTTTAA------------AG------AT-------CTCTATT-------A-CAA-----------------------------ACTTTAACAAAAGAAAAAAACA--AGAT-AGAACGCTATAGT------CGAGTT----CCCCGACTATCA---GATAATTAA---GAAACAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAA--CT-----------------------------------------TTTTTCA-A------------------------AAGTG-CGGGCGTG------ACAGTTT--------------------------------TGGTAGAGTGGACGCGGCAAAAAGTTTTTT--GGCAAA-------------C----------------TTAT----AGAA-----ATTTACAAAATACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droSec2
ACAG---------T---------------------------------AA-----ATATA--------------------------------------------------AA------AG-------TTTAAGTTAG--AAG-T------AGTCAACAAACATTGCATTGTTAAA---------------TAA--CAAACGAG-AGAATGCTGTTGT------CGAGTT----CCTTGACTATCA---GATATCCGTTACGCAGCTAGTGTGAATG-----CG----AACGC-GAAATTTCCTGATTTTT------------------------------------------------------------------------------------------------------------------------------------C----------------TGG--------------------------------TCGG-T------------------------TTTTGTGG---------------------------------------------------CG-TTGAGTGGACGTGGCAAAAATTCTTTT--TGGAAA-------------T----------------CGAT----AGAA-----ATTTACAAGATTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................CTAGTGTGAATG-----CG----AACGC-GAAATT..............................................................................................................................................................................................................................................................................................................................................................................................25201.452900290
.............................................................................................................................................................................................TAA--CAAACGAG-AGAATGCTGTTGT------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
.....................................................................................................................................TAG--AAG-T------AGTCAACAAACATTGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.2042020
.....................................................................................................................................TAG--AAG-T------AGTCAACAAACATTGCATTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2044000
.....................................................................................................................................TAG--AAG-T------AGTCAACAAACATTGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2043001
..........................................................................................................................................................................................................................................TTGACTATCA---GATATCCGTTACGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1530030
.....................................................................................................................................................................................................................TGT------CGAGTT----CCTTGACTATCA---GATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1533000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGG---------------------------------------------------CG-TTGAGTGGACGTGG.................................................................................21200.1021010
..................................................................................................................................................................................................................................TT----CCTTGACTATCA---GATATCCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020020
..................................................................................................................................AGTTAG--AAG-T------AGTCAACAAACATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000
.................................................................................................................................................................................................................................................TCA---GATATCCGTTACGCAGCTAGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510001
..................................................................................................................................................................................................................TGTTGT------CGAGTT----CCTTGACTATCA---GA...............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000
...............................................................................................................................................................................................................................................TATCA---GATATCCGTTACGCAGCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010
.........................................................................................................................................................................................................G-AGAATGCTGTTGT------CGAGTT----CC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0511000
.......................................................................................................................................................................................................GAG-AGAATGCTGTTGT------CGAGTT----CCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010
................................................................................................................................TAAGTTAG--AAG-T------AGTCAACAAACAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0511000
..........................................................................................................................................................................................................................................TTGACTATCA---GATATCCGTTACGCAGT................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510010
..........................................................................................................................................................................................................................................TTGACTATCA---GATATCCGTTA......................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000
.........................................................................................................................................................................................................................................CTTGACTATCA---GATATCCGTTACGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0511000
.......................................................................................................................................................................................................................................................................CTAGTGTGAATG-----CG----AACGC-GAAAT...............................................................................................................................................................................................................................................................................................................................................................................................24200.0510001
droSim2
TGGA---------C---------------------------------CACAGTG-----CATGGAAGGAATCTAGCTTCGGCAAGCC----------------------------------------------ATTAA---AGTAATT-G-----------------------TTC-------------AGGAACA--AGAG-ATAATGCTATAGT------CGAGTT----CCCCGAGTATCA---GGTACCCGTTATTCAGCTAGGCGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGGTTTCGTGG-C------------------------TTTAG-GG---------------------------------------------------CGTTAGAGTGGGCGGGGCAAAAAGTTTTTT--GGCAAT-------------T----------------CGAT----AGAA-----ATTTAAGCGACTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................AACA--AGAG-ATAATGCTATAGT------CG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.86600006000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTGGGCGGGGCAAAAAGTTTTT.....................................................................2520.50100000000000010000
......................................................................................................................................................................................................AGAG-ATAATGCTATAGT------CGAGTT----CCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.33100000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGCGGGGCAAAAAGTTTTT.....................................................................2330.33100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG-C------------------------TTTAG-GG---------------------------------------------------CGTTAGAGTGGGC.....................................................................................24120.25300000030000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGG-C------------------------TTTAG-GG---------------------------------------------------CGTTAGAGT.........................................................................................2150.20100000000001000000
................................................................................................................................................................................................AACA--AGAG-ATAATGCTATAGT------CGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGAGTGGGCGGGGCAAAAA...........................................................................2260.17100000010000000000
.................................................................................................................................................................................................ACA--AGAG-ATAATGCTATAGT------CGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100000001000000000
..................................................................................................................................................................................................CA--AGAG-ATAATGCTATAGT------CGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGAGTGGGCGGGGCA...............................................................................1870.14100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAG-GG---------------------------------------------------CGTTAGAGTG........................................................................................17200.10200000000002000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAG-GG---------------------------------------------------CGTTAGAGTGGG......................................................................................19200.10200000000200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG-C------------------------TTTAG-GG---------------------------------------------------CGTTAGAGTGG.......................................................................................22120.08100000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG-C------------------------TTTAG-GG---------------------------------------------------CGTTAGAGTGGGCG....................................................................................25120.08100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGAGTGGGCGGG..................................................................................15130.08100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG-C------------------------TTTAG-GG---------------------------------------------------CGTTAGAGTGGCGT....................................................................................25170.06100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------TTTAG-GG---------------------------------------------------CGTTAGAGTGGG......................................................................................20200.05100000000000010000
..............................................................................................................................................................................................................ATGCTATAGT------CGAGTT----CCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTTTTTT--GGCAA.............................................................16200.05100000010000000000
dm3
CAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACCCGTTACTCTGCTTGTGCGATTG-----CG----AACGC-GAAATTTTATAATTATTCTGGGATATCGACAGATAGTGGGGAATAACATAAGAAAAAATTGTGGGAATGGGTGTGGCAAAAAGTTTTTTAGCAAATCGATATATAATTACACAACTAATAAAATTATGAAAGAATATCTAACAATT---TT--GATTGTTTGTTTG---ATTG-------TTTG--------ATCGTTTCTGAGC-T------------------------TATAG-GG---------------------------------------------------CGTTATTGTAGGCGTGGCAAAAAGTTGTTT--GGCAAA-------------T----------------CGAT----AGAA-----ATTTACAAGACTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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...................................................................................................................................................................................................................................................................................................................................................ATAAGAAAAAATTGTGGGAATGGG.............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTTG---ATTG-------TTTG--------ATCGTT..............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................ATTTTATAATTATTCTGGGATATCGACA.....................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---TT--GATTGTTTGTTTG---ATTG-------TTTG--------A...................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AAAAAATTGTGGGAATGGGTGTGGCAAATC..................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TAACATAAGAAAAAATTGTGGGAATG...............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------TATAG-GG---------------------------------------------------CGTTATTGTAGGCGATC.................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AAAATTGTGGGAATGGGTGTGG........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CATAAGAAAAAATTGTGGGAATGGG.............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-------TTTG--------ATCGTTTCTGAGC-T------------------------T............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT---TT--GATTGTTTGTTTG---ATTG-------TTTG--------A...................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................ATCGATATATAATTACACAACTAA..............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AACATAAGAAAAAATTGTGGGAATGGG.............................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ATTCTGGGATATCGACAGATAGT...............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TGGGATATCGACAGATAGTGGGG...........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------TATAG-GG---------------------------------------------------CGTTATTGTAGGCGTGGCAA..............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................CGC-GAAATTTTATAATTATTCTGGGATA...........................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................ACATAAGAAAAAATTGTGGGAATGGT.............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTGTTTG---ATTG-------TTTG--------ATCGTT..............................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---TT--GATTGTTTGTTTG---ATTG-------TTT.............................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TACTCTGCTTGTGCGATTG-----CG----A.........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TGCTTGTGCGATTG-----CG----AACGC-....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TAACATAAGAAAAAATTGTGGGAATGG..............................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGTAGGCGTGGCAAAAAGTTGT......................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------TATAG-GG---------------------------------------------------CGTTATTGTAGGCGTGATC...............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TAAGAAAAAATTGTGGGAATGGGTG...........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG--------ATCGTTTCTGAGC-T------------------------TATAG-GG---------------------------------------------------CG................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CCGTTACTCTGCTTGTGCGATTG-----CG----AC........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---TT--GATTGTTTGTTTG---ATTG-------TT..............................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAG-GG---------------------------------------------------CGTTATTGTAGGCGTGG.................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAGC-T------------------------TATAG-GG---------------------------------------------------CGTTATTGTA........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TATTCTGGGATATCGACAGATAGTGGG............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-T------------------------TATAG-GG---------------------------------------------------CGTTATTGTAGGCGT...................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................TACTCTGCTTGTGCGATTG-----CG----AACGC-GA..................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TTACTCTGCTTGTGCGATTG-----CG----AAC.......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AATT---TT--GATTGTTTGTTTG---AT.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAAAGAATATCTAACAATT---...............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCTGGGATATCGACAGATAGTGGG............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TCGACAGATAGTGGGGAATAACATA..................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAG-GG---------------------------------------------------CGTTATTGTAGGCGTG..................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TATTCTGGGATATCGACAGATAGT...............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG---ATTG-------TTTG--------ATCGTTTCTGAGC-T------------------------TA...........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG-------TTTG--------ATCGTTTCTGAGC-T------------------------TATAG-G......................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GC-GAAATTTTATAATTATTCTGGGA.............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CGACAGATAGTGGGGAATAACATAA.................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-------TTTG--------ATCGTTTCTGAGC-T------------------------TATAG-G......................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGGCAAAAAGTTGTTT--GG................................................................2190.7870000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013000000020000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTT--GGCAAA-------------T----------------CGAT----AG....................2170.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAAAAAGTTGTTT--GGCAAA-------------T----------------CGA...........................2660.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TGGGATATCGACAGATAGT...............................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AATAACATAAGAAAAAAT.........................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TGGGTGTGGCAAAAAGTTTTTTAGC........................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TGGGATATCGACAGATAGTG..............................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CAACTAATAAAATTATGAAAGAATA............................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTGTTT--GGCAAA-------------T----------------CGAT----AGAA-----AT...........2640.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................GCAAAAAGTTTTTTAGCAAATCGATA...............................................................................................................................................................................................................................................................................................2650.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTGTTT--GGCAAA-------------T----------------CGAT----A.....................21130.3850000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000001000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGTTGTTT--GGCAAA-------------T----------------CG............................21140.3650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002300000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTTGTTT--GGCAAA-------------T----------------CGA...........................21140.3650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001200000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGGCAAAAAGTTTTTTAGCAAATCGA.................................................................................................................................................................................................................................................................................................2660.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGTTGTTT--GGCAAA-------------T----------------C.............................20150.2740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGCAAAAAGTTGTTT--GGC...............................................................2180.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACTAATAAAATTATGAAAGAA..............................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTTGTTT--GGCAAA-------------T----------------CGA...........................20160.2540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTT--GGCAAA-------------T----------------CGAT----AGAA-----ATTTA........2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CAAAAAGTTTTTTAGCAAATCGATA...............................................................................................................................................................................................................................................................................................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
ATTG---------A-------GTTTTAGCAACCTTAAT-CGATTGTTGA-----------------------------AGA------T--AGG--AAA-TTCTTTAATTATTGATTGATTG------------------------------TACCA-TTCC------------ATG-------------ACTAACA--AGAG-GAAACGCTATAAT------CGAGTG----CCGCGACTATAA---GATACCCGTTACTGTTTTACACAATTTT-----AA----AA-TA-TT------------------------------------------------------------------------------------------------------------------------------------------------GATTTTG--CT---------------A-------TTGGA---------------------------------------------------------------------------------------------------------------AATTGCCCAAGCGCCAACCATTTT--CGGA---------------------------------GAA----AGCA-----TGTTGAGTAACCGSizeHit CountTotal NormTotal
No Reads
droBia1
CATT---------GT--------------------------------CA--------------------------------------------------------------------ATTTAAAAATTTAA----------TA-AAATTTATAA------------------------------AAAAAAAAAACA--AGGA-AGAACTCTATAGT------CTAGTG----CCTCGACTATCA---GATACCCGTTACTCTGTTTAAGGGAGCAAAAGGATAATGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCG-T------------------------TTGTG-TG---------------------------------------------------CGTTAAAGTGGCCGTGGCACAT--TTTT-----GTAAG-------------C------AG---CAAAGCTAT-------A-----TTTTATGGCGCCASizeHit CountTotal NormTotal
No Reads
droTak1
GAGG-AGGTGGG-CGCATTCAA-------------AATTTTA-AAGTCA-----------------------------CAG------CAAAGTTTAA------------AA------AT-------CTTCATTTGT--GAA-CAG---CGTTTAAAAA--------------------------TTAAATAAAACA--AGAG-AGAACGCTATAGT------CGGGTTGTTGTCCCGACTATCT---AATACCCGTCACTCAGCTAAAGGGAGTG-----CG----AACGC------------------------------------------------------------------------------------------------------------------------------------------------------T----------------GTGTCGGGTTGGTG------------------------T-CCCGACTAATAATCGTAACTCAGCTA--------------------------------------------------------------------------------------------------------------------------------------AAGG-----GAGTGCGAG---GSizeHit CountTotal NormTotal
No Reads
droEle1
AATA---------A---------------------------------TA-----T----------------------------------------------------------------------------------------------------------------------AAA-------------TCAAACA--AGAA-GAAACGATATAGT------CGAGTT----CCTCGACTTTTA---GACACCCGTTACTCAGTTAACCAATTTG-----AA----AACCCAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTCGCGATT------------------------TTTTA-GG---------------------------------------------------AGTTAGAGTGGGCGTGGCCAC--GTTTTTA--AATAAA-------------CTTTCGTTGCGTAGGAATAAC---TATAATCTGCATGTGAAAGCCTASizeHit CountTotal NormTotal
No Reads
droRho1
TACA---------CGCATC-----TCAATGAA---------------TACAGTA-----CGGTGAAAAAATGTGGT--AAT------C--AGA--AAGTTTATCTAATTGGT-TTTACTTG------------------------------TGACA-ATCA---A--------AGC-------------CTAAACA--AGAG-AGAACGCTATAGT------CGGGTG----CCCCGACTATCA---GATACCCGTTACTCAGGTAAAGGGAGTG-----CG----AGGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGGAGATAGAA--------ACTTTGATCACGCATAACTTTTTAACG--AATGGTCCGATTTGAAAAATTTCTTC--TACATT-------------T----------------CGAT----AGGT-----ATTGATCAACACASizeHit CountTotal NormTotal
No Reads
droFic1
AAAG---------G---------------------------------CT-----A----------------------------------------------------------------------------------------------------CAAAAACCGA--------AA---------TAAAATCAAATA--AGAG-AGATCGCTATAGT------CTAGTG----CATCGACTATCA---GATACCCATTCCTCAATTAAACAATAGG-----AGATGATAC------------------GC------------------------------------------------------------------------------------------------------------------------------------C----------------CCA--------------------------------TAGG-G------------------------TGGTG-TG---------------------------------------------------CGTAATAGTGAGCGTGGCACAAATGCTT----------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AAGC---------T---------------------------------GA-----AA-----------------------------------------------------------------------------------------------------------------------A-------------AAAACAA--AGAA-AGAACGCCATTGT------CGAGTG----CCCCGAATATGA---GATACCCGGCACTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TAGA---------T---------------------------------TA-----AAA----------------------------------------------------AGTGATTAATTTAACTATTTTA----------TA-A---------GG-ATTT---A--------AAA-------------TTTAACAAAAGAAAGGATATCTATAGT------AGAGTT----ACTCGACTGTAT---GTTACCCGGTACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AGAA---------T---------------------------------AA-----A----------------------------------------------------------------------------------------------------------------------AAA-------------TTAAACA--AGAAAATACGGCTTTATT------CCAGTT----TCCCGACTATAT---TATACCCGGTACTCATCTCATATCCATA-----AT----TAAAC-TA------------------------------------------------------------------------------------------------------------------------------------------------A-------------------------------------------------CCTTTAT---A------------------------GTTTA-AA---------------------------------------------------CTTTAGAGCAGGTGTGCCCAAACGCTGCTT--ACGA---------------------------CGGAGAAATTCCAATAA-----ATTCAAAAG---ASizeHit CountTotal NormTotal
No Reads
dp5
TAGC---------T---------------------------------CA-----TA----------------------------------------A------------AA------AA-------CTAAATTTTTGA---AAAGAAT-GCCCAAAAAGCA---A--------AGA-------------AAAAACG--AGGG-GGAACGTTGTGAGTTGCTGCGGACA----CCGCAACTCTACAGTTATACCCGATACTAAGTCAGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................TGAGTTGCTGCGGACA----CCGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................232072.5014500145000000000
....................................................................................................................................................................................................................TGAGTTGCTGCGGACA----CCGCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................222018.65373000037300000
.................................................................................................................................................................................................................TTGTGAGTTGCTGCGGACA----CCGCAACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................27207.45149014900000000
.....................................................................................................................................................................................................................GAGTTGCTGCGGACA----CCGCAACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................23204.709409400000000
............................................................................................................................................................................................................GAACGTTGTGAGTTGCTGCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................21204.208408400000000
.................................................................................................................................................................................................................TTGTGAGTTGCTGCGGACA----CCGCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.601200001200000
.............................................................................................................................................................................................................AACGTTGTGAGTTGCTGCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.4590900000000
....................................................................................................................................................................................................................TGAGTTGCTGCGGACA----CCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.3570002000500
.........................................................................................................................................................................................................................TGCTGCGGACA----CCGCAACTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.3060600000000
..........................................................................................................................................................................................................................................GCAACTCTACAGTTATACCCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040400000000
...........................................................................................................................................................................................................GGAACGTTGTGAGTTGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000020000
................................................................................................................................................................................................................GTTGTGAGTTGCTGCGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020002000000
........................................................................................................................................................................................................................TTGCTGCGGACA----CCGCAACTCTACAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020020000000
......................................................................................................................................................................................................................AGTTGCTGCGGACA----CCGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000010
..................................................................................................................................................................................................CG--AGGG-GGAACGTTGTGAGTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000010000
.................................................................................................................................................................................................................................ACA----CCGCAACTCTACAGTTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.............................................................................................................................................................................................AAAAACG--AGGG-GGAACGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
....................................................................................................................................................................................................................TGAGTTGCTGCGGACA----CCGCAACTCTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510100000000
................................................................................................................................................................................................................GTTGTGAGTTGCTGCGGACA----CCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
droPer2
TATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT------CATCTT----CTACGATTCTGC---GATTTTAGTTTTCTCGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGTCGAAATTGTGGATGCCACAGATTTTCGCCC-T------------------------TTGTG-GG---------------------------------------------------GGCGGAAGTGGGCGGGGCAAA--GTTTT----------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................ATTTTAGTTTTCTCGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGT.....................................................................................................................................................................................................................21200.051010000
droWil2
ACCT---------T-------------------------------------------------------------------------------------------------------------------AATGTAC--AAA-GAG---CGGTAAAA-AAAA---A--------AAA-------------AAAAACA--AAAA-AAAAAAC----------------CA----CCCCAATTGATG---AATGCTTGTATGTTAGAAAGAGACAGCG-----TG----GAGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGCGAACAGTATAGAGAGAA------------------------CCCTGAAGTTTGCGTGGCAAAGAGGCTGGA--AGCGCAAAGAGATTGACGAT----------------CGTT----GGAA-----TTTTGCAAA---ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................TTGTATGTTAGAAAGAGACAGCG-----TG----G.........................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACAGTATAGAGAGAA------------------------CCCT..............................................................................................2340.50202000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACAGTATAGAGAGAA------------------------CCCTG.............................................................................................2440.25101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACAGTATAGAGAGAA------------------------CC................................................................................................2140.25101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGAACAGTATAGAGA.............................................................................................................................1840.25101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGAACAGTATAGAGAGAA------------------------CCCTG.............................................................................................2540.25100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGAGAGAA------------------------CCCTGAAGTTTGC.....................................................................................2450.20101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTATAGAGAGAA------------------------CCCTGAAGT.........................................................................................2450.20101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGAGAGAA------------------------CCCTGAAGTTTG......................................................................................2350.20101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTATAGAGAGAA------------------------CCCTGA............................................................................................2150.20101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGTATAGAGAGAA------------------------CCCTGAAGT.........................................................................................2650.20100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGAGAGAA------------------------CCCTGAAGTT........................................................................................2160.17100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATTGACGAT----------------CGTT----GGAA-----TTT..........23100.10101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGAAGTTTGCGTGGCAAAGAG..........................................................................24170.06101000
............................................................................................................................................................................................................................................AATTGATG---AATGCTTGTATGTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100001
...........................................................................................................................................................................................................................................CAATTGATG---AATGCTTGTATGTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
........................................................................................................................................................AAAA-AAAA---A--------AAA-------------AAAAACA--AAAA-A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...........................................................................................................................................................................................................................................CAATTGATG---AATGCTTGTATGTTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
............................................................................................................................................................................................................................................AATTGATG---AATGCTTGTATGTTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA------------------------CCCTGAAGTTTGCGTGT.................................................................................20200.05101000
.............................................................................................................................................................................................................AAAAC----------------CA----CCCCAATTGATG---.................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
droVir3
GA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAACA--AATG-AGAACGCTTTAGT------CGAGTG---TTCTCGACTACTA---AATATCCTCTACCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TTTC-AAATAATAA---------------------------------TA-----G----------------------------------------------------------------------------------------------------------------------AAA-------------ATAAACA--AGTA-AGAAAACTCTAGT------CAAGAG---TGCACGACTAGAT---ACTACCCTGAGCCCAACTAATAAAAATA-----CC----CAT--------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------AGTATGGCTAAAA--------------------------------------------------------------------------------------------------------------TTTCAATTTCGATGTAT------------T--TAAATA-------------T----------------AAAA----AATG-----AAGTACAAAACTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................CTAGAT---ACTACCCTGAGCCCAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................2470.866300030
...............................................................................................................................................................................................................................................TAGAT---ACTACCCTGAGCCCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................2270.433300000
..............................................................................................................................................................................................................................................CTAGAT---ACTACCCTGAGCCCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................2370.433300000
................................................................................................................................................................................................................................................AGAT---ACTACCCTGAGCCCAACTA..............................................................................................................................................................................................................................................................................................................................................................................................................................2370.292200000
..............................................................................................................................................................................................................................................CTAGAT---ACTACCCTGAGCCCAACTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................2670.292200000
..............................................................................................................................................................................................................................................CTAGAT---ACTACCCTGAGCCCAACTA..............................................................................................................................................................................................................................................................................................................................................................................................................................2570.292200000
...........................................................................................................................................................................................................................................CGACTAGAT---ACTACCCTGAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................2350.201000010
...................................................................................................................................................................................................................................................T---ACTACCCTGAGCCCAACTA..............................................................................................................................................................................................................................................................................................................................................................................................................................2070.141100000
..............................................................................................................................................................................................................................................CTAGAT---ACTACCCTGAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................2070.141000010
.................................................................................................................................................................................................................................................GAT---ACTACCCTGAGCCCAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................2170.141100000
.............................................................................................................................................................................................................................................ACTAGAT---ACTACCCTGAGCCCAACTA..............................................................................................................................................................................................................................................................................................................................................................................................................................2670.141100000
................................................................................................................................................................................................................................................AGAT---ACTACCCTGAGCCCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2070.141100000
.................................................................................................................................................................................................................................................GAT---ACTACCCTGAGCCCAACTA..............................................................................................................................................................................................................................................................................................................................................................................................................................2270.141100000
..............................................................................................................................................................................................................................................CTAGAT---ACTACCCTGAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................1990.111000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCTAAAA--------------------------------------------------------------------------------------------------------------TTTCAATTTCGAT.....................................................................................23200.051000010
droGri2
AAAG---------G---------------------------------TA-----G----------------------------------------------------------------------------------------------------------------------AAG-------------AAAAAGA--GGAG-AGAACCTTACAGT------CGGGCG---TAACCGACTGCGA---AATACTCTGATTCCCATAAGTAATACCA-----TC----TAA------------------------------------------------------------------------------------------------------------------------------------------------AACTG---AT--AACTGT-----------AGCTCTCAAATTGCGAGAGATATGGACTTTTATCG-T------------------------TATTG-GG---------------------------------------------------GGCAGGTGTAGGTGTGGTCCAAAATGTTTGTGAAGA---------------G-------------TGTTACT----TGTA-----ATACACATAACTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:11 PM