ID:

dya_250

 Coordinate:

2L:6759523-6759673 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.2 -4.1 -3.7

Flybase annnotation

exon [dyak_GLEANR_1388:3]; CDS [Dyak\GE13692-cds]; intron [Dyak\GE13692-in]

No Repeatable elements found

mature
  1. 2L:6758349-6758367 -
  2. 2L:6758679-6758697 -
  3. 2L:6758928-6758946 -
  4. 2L:6759258-6759276 -
  5. 2L:6759468-6759486 -
  6. dya_250  2L:6759641-6759659 -
  7. dya_249  2L:6759851-6759869 -
star
  1. 2L:6758250-6758271 -
  2. 2L:6758400-6758421 -
  3. 2L:6758520-6758541 -
  4. 2L:6758550-6758571 -
  5. 2L:6758730-6758751 -
  6. 2L:6758760-6758781 -
  7. 2L:6758829-6758850 -
  8. 2L:6758979-6759000 -
  9. 2L:6759099-6759120 -
  10. 2L:6759309-6759330 -
  11. 2L:6759339-6759360 -
  12. dya_250  2L:6759549-6759570 -
  13. dya_250  2L:6759579-6759600 -
  14. 2L:6759692-6759713 -
  15. dya_249  2L:6759722-6759743 -
  16. 2L:6759932-6759953 -
  17. 2L:6759962-6759983 -
  18. 2L:6760142-6760163 -
  19. 2L:6760202-6760223 -
  20. 2L:6760262-6760283 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATTACAACCACAACAACCTGTGCTCCCGAAATTACAACCACAACAACCTGTGCACCAGAAATTACAACTACAACAACCCGTGCACCTGAAGTTACGACCACAAAAACCTGTGCNNNNNNNNNNCAACAACCTGTGCTCCCGAAATTACAACCACAACAACCTGTGCTCCCGAAATTACAACCACAACAACCTGTGCTCCAGTAATTACAACCACAACAACCTGTGCACCAGAAATTACAACTACAACAACC
****************************************************************..............((.((((.....(((.....((((......))))............))).....))))...))....********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M056
embryo
 M043
female body
 V046
embryo
 V058
head
 V052
head
.......................................................................................................................................................................................CAACAACCTGTGCTCCAGT................................................. 19 0 10 0.20 2 1 0 1 0 0
...............................................................................................................................................................................TACAACCACAACAACCTGTGCTCCAGT................................................. 27 0 10 0.20 2 1 0 1 0 0
...............................................................................................................................................................................................TGTGCTCCAGTAATTACAACCACAAC.................................. 26 0 12 0.17 2 0 2 0 0 0
....................................................................................................................................................................................................TCCAGTAATTACAACCACAACAACCTG............................ 27 0 12 0.17 2 0 2 0 0 0
................................................................CAACTACAACAACCCGTGC........................................................................................................................................................................ 19 0 7 0.14 1 1 0 0 0 0
...................................AACCACAACAACCTGTGCACCAGAAAT............................................................................................................................................................................................. 27 0 9 0.11 1 0 1 0 0 0
................................................................................................................................................................................................................AACCACAACAACCTGTGCACCAGAAAT................ 27 0 9 0.11 1 0 1 0 0 0
........................................................................................................................................................................................AACAACCTGTGCTCCAGTA................................................ 19 0 10 0.10 1 1 0 0 0 0
...........................................................................................................................CAACAACCTGTGCTCCCGAAAT.......................................................................................................... 22 0 20 0.10 2 2 0 0 0 0
....................................................................................................................................................................................CCACAACAACCTGTGCTCCAGT................................................. 22 0 10 0.10 1 1 0 0 0 0
.......................................................................................................................................................................................CAACAACATGTGCTCCAGTAATTACAACC....................................... 29 1 10 0.10 1 1 0 0 0 0
.......................................................................................................................................................................................CAACAACCTGTGCTCCAGTAATTACAAC........................................ 28 0 10 0.10 1 1 0 0 0 0
........................................................................................................................................................................................AACAACCTGTGCTCCAGTAATTACAAC........................................ 27 0 10 0.10 1 1 0 0 0 0
................................................................................................................................................................................ACAACCACAACAACCTGTGCTCCAGT................................................. 26 0 10 0.10 1 0 1 0 0 0
...................................................................................................................................................................................ACCACAACAACCTGTGCTCCAGTA................................................ 24 0 10 0.10 1 0 1 0 0 0
.........................................................................................................................................................CAACAACCTGTGCTCCCGAAAT............................................................................ 22 0 20 0.10 2 2 0 0 0 0
..............................ATTACAACCACAACAACCTGTGCACC................................................................................................................................................................................................... 26 0 10 0.10 1 0 1 0 0 0
.....................................................................................................................................................................................CACAACAACCTGTGCTCCAGT................................................. 21 0 10 0.10 1 1 0 0 0 0
..........CAACAACCTGTGCTCCCGAAAT........................................................................................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0
...........................................................................................................................................................................................................ATTACAACCACAACAACCTGTGCACC...................... 26 0 10 0.10 1 0 1 0 0 0
.....................................................................................................................................................................................CACAACAACCTGTGCTCCAGTAATTAC........................................... 27 0 10 0.10 1 1 0 0 0 0
................................................................................................................................................................................................................AACCACAACAACCTGTGCACCA..................... 22 0 12 0.08 1 0 1 0 0 0
...................................AACCACAACAACCTGTGCACCA.................................................................................................................................................................................................. 22 0 12 0.08 1 0 1 0 0 0
..................................CAACCACTACAACCTGTGCACCAA................................................................................................................................................................................................. 24 2 12 0.08 1 0 0 0 1 0
..................................................................................................................................................................................................GCTCCAGTAATTACAACCACAACAACC.............................. 27 0 12 0.08 1 1 0 0 0 0
...............................................................................................................................................................................................................CAACCACTACAACCTGTGCACCAA.................... 24 2 12 0.08 1 0 0 0 1 0
..............................................................................................................................................................................................................ACAACCACAACAACCTGTGCAC....................... 22 0 12 0.08 1 1 0 0 0 0
.................................ACAACCACAACAACCTGTGCAC.................................................................................................................................................................................................... 22 0 12 0.08 1 1 0 0 0 0
...............................................................................................................................................................................TACAACCACAACAACCTGTGCTCCAGC................................................. 27 1 14 0.07 1 1 0 0 0 0
...................................................................................................................................................................................ACCACAACAACCTGTGCTCCA................................................... 21 0 14 0.07 1 0 1 0 0 0
....................................................................................................................................................AACCACAACAACCTGTGCTCCCGAAAT............................................................................ 27 0 17 0.06 1 0 1 0 0 0
..TACAACCACAACAACCTGTGCTCCC................................................................................................................................................................................................................................ 25 0 17 0.06 1 0 1 0 0 0
.................................................................................................................................................TACAACCACAACAACCTGTGCTCCC................................................................................. 25 0 17 0.06 1 0 1 0 0 0
.....AACCACAACAACCTGTGCTCCCGAAAT........................................................................................................................................................................................................................... 27 0 17 0.06 1 0 1 0 0 0
.......................................................................................................................................................CACAACAACCTGTGCTCCCGA............................................................................... 21 0 18 0.06 1 1 0 0 0 0
.....................................................................................................................................................ACCACAACAACCTGTGCTCCCGA............................................................................... 23 0 18 0.06 1 0 1 0 0 0
........CACAACAACCTGTGCTCCCGAAA............................................................................................................................................................................................................................ 23 0 18 0.06 1 1 0 0 0 0
......................................................................................................................................................CCACAACAACCTGTGCTCCCGAA.............................................................................. 23 0 18 0.06 1 0 1 0 0 0
.......................................................................................................................................................CACAACAACCTGTGCTCCCGAAATT........................................................................... 25 0 18 0.06 1 0 0 1 0 0
......................................................................................................................................................................................................GATCAATTACAACCACAACAACCTGT........................... 26 3 18 0.06 1 1 0 0 0 0
.......................................................................................................................................................CACAACAACCTGTGCTCCCGAAA............................................................................. 23 0 18 0.06 1 1 0 0 0 0
........CACAACAACCTGTGCTCCCGAAATT.......................................................................................................................................................................................................................... 25 0 18 0.06 1 0 0 1 0 0
........CACAACAACCTGTGCTCCCGA.............................................................................................................................................................................................................................. 21 0 18 0.06 1 1 0 0 0 0
.......CCACAACAACCTGTGCTCCCGAA............................................................................................................................................................................................................................. 23 0 18 0.06 1 0 1 0 0 0
......ACCACAACAACCTGTGCTCCCGA.............................................................................................................................................................................................................................. 23 0 18 0.06 1 0 1 0 0 0
...................................................................................................................................................................................................................CACTACAACCTGTGCACCAAC................... 21 3 19 0.05 1 0 0 0 0 1
......................................CACTACAACCTGTGCACCAAC................................................................................................................................................................................................ 21 3 19 0.05 1 0 0 0 0 1
.............................................................................................................................................................................................................TGCAACCACAACAACCTGT........................... 19 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................AACAACCTGTGCTCCCGAAATTACAAC...................................................................... 27 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................TTACAACCACAACAACCTGC....................................................................................... 20 1 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................ACAACCACAACAACCTGTGCTCC.................................................... 23 0 20 0.05 1 1 0 0 0 0
..........CAACAACCTGTGCTCCCGAAATT.......................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................TACAACCACAACAACCTGTG.......................... 20 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................CAACCACAACAACCTGTGCTCC.................................................... 22 0 20 0.05 1 1 0 0 0 0
..........CAACAACCTGTGCTCCCGAAATTAC........................................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
..............AACCTGTGCTCCCGAAATT.......................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................CAACAACCTGTGCTCCCGAAA........................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
................................TGCAACCACAACAACCTGT........................................................................................................................................................................................................ 19 1 20 0.05 1 1 0 0 0 0
....CAACCACAACAACCTGTGCTCC................................................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................TACAACCACAACAACCTGT....................................................................................... 19 0 20 0.05 1 0 0 1 0 0
..........................................................................................................................................................................GAAATTACAACCACAACAACC............................................................ 21 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................AACCTGTGCTCCCGAAATT......................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
..........CAACAACCTGTGCTCCCGAAA............................................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................TTACAACCACAACAACCTGT....................................................................................... 20 0 20 0.05 1 0 0 1 0 0
............................................................................................................................AACAACCTGTGCTCCCGAAATTACAAC.................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................CAACAACCTGTGCTCCCGAAA............................................................................. 21 0 20 0.05 1 1 0 0 0 0
..................TTTGCTCCCGAAATTACAACCAC.................................................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................TGTGCTCCCGAAATTACAAC...................................................................... 20 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................CAACAACCTGTGCTCCCGA............................................................................... 19 0 20 0.05 1 0 0 1 0 0
.............................................................................................................................................................................................................TACAACCACAACAACCTGC........................... 19 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................CAACAACCTGTGCTCCCGAAATTAC......................................................................... 25 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................CAACCACAACAACCTGTGCTCC.................................................................................. 22 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................AATTACAACCACAACAACCT............................. 20 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................AACCTGTGCTCCCGAAATT........................................................................... 19 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................CATTACAACCACAACAACCTGTGC....................................................... 24 1 20 0.05 1 1 0 0 0 0
..TACAACCACAACAACCTGT...................................................................................................................................................................................................................................... 19 0 20 0.05 1 0 0 1 0 0
.................................................................................................................................................................TTTGCTCCCGAAATTACAACCAC................................................................... 23 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................TTACAACCACAACAACCTGC........................... 20 1 20 0.05 1 1 0 0 0 0
.........ACAACAACCTGTGCTCCCGAA............................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
...........AACAACCTGTGCTCCCGAAATTACAAC..................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................TGTGCTCCCGAAATTACAAC.................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................TTACAACCACAACAACCTGT........................... 20 0 20 0.05 1 0 0 1 0 0
...........................................................................................................................CAACAACCTGTGCTCCCGAAATT......................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................CAACAACCTGTGCTCCCGA............................................................................................................. 19 0 20 0.05 1 0 0 1 0 0
..........CAACAACCTGTGCTCCCGA.............................................................................................................................................................................................................................. 19 0 20 0.05 1 0 0 1 0 0
...ACAACCACAACAACCTGTGCTCC................................................................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................CAACAACCTGTGCTCCCGAAATTAC....................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................ACAACAACCTGTGCTCCCGAA.............................................................................. 21 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................AATTACAACCACAACAACCT......................................................................................... 20 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................CAACAACCTGTGCTCCCGAAATT........................................................................... 23 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................TACAACCACAACAACCTGT......................................................... 19 0 20 0.05 1 0 0 1 0 0
...................................................................................................................................TTTGCTCCCGAAATTACAACCAC................................................................................................. 23 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................TACAACCACAACAACCTGTGCTCC.................................................................................. 24 0 20 0.05 1 0 1 0 0 0
...........................GAAATTACAACCACAACAACC........................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

TAATGTTGGTGTTGTTGGACACGAGGGCTTTAATGTTGGTGTTGTTGGACACGTGGTCTTTAATGTTGATGTTGTTGGGCACGTGGACTTCAATGCTGGTGTTTTTGGACACGNNNNNNNNNNGTTGTTGGACACGAGGGCTTTAATGTTGGTGTTGTTGGACACGAGGGCTTTAATGTTGGTGTTGTTGGACACGAGGTCATTAATGTTGGTGTTGTTGGACACGTGGTCTTTAATGTTGATGTTGTTGG
**********************************************************************************************************..............((.((((.....(((.....((((......))))............))).....))))...))....**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 V120
male body		 V058
head
 M026
head
........................................GCTGTTGGCCACGTGGTCTC............................................................................................................................................................................................... 20 3 20 1.40 28 26 0 2 0 0
.....................................................................................................................................................................................................................GCTGTTGGCCACGTGGTCTC.................. 20 3 20 1.40 28 26 0 2 0 0
........................................GCTGTTGGCCACGTGGTCT................................................................................................................................................................................................ 19 2 15 1.20 18 17 0 1 0 0
.....................................................................................................................................................................................................................GCTGTTGGCCACGTGGTCT................... 19 2 15 1.20 18 17 0 1 0 0
.......................................CGCTGTTGGCCACGTGGTC................................................................................................................................................................................................. 19 3 20 0.55 11 9 0 0 1 1
....................................................................................................................................................................................................................CGCTGTTGGCCACGTGGTC.................... 19 3 20 0.55 11 9 0 0 1 1
........................................GCTGTTGGCCACGTGGTC................................................................................................................................................................................................. 18 2 20 0.45 9 9 0 0 0 0
.....................................................................................................................................................................................................................GCTGTTGGCCACGTGGTC.................... 18 2 20 0.45 9 9 0 0 0 0
...................................................CGTGGTCTTTAATGTTGATGTTGT................................................................................................................................................................................ 24 0 7 0.43 3 3 0 0 0 0
................................................................................................................................................................................................................................CGTGGTCTTTAATGTTGATGTTGT... 24 0 7 0.43 3 3 0 0 0 0
..................................................................................................................................................................................................CGAGGTCATTAATGTTGGTGTTGTT................................ 25 0 12 0.42 5 3 2 0 0 0
..................................................................................................................................................................................................CGAGGTCATTAATGTTGGTGTTGT................................. 24 0 12 0.42 5 4 1 0 0 0
.............................................................................................................................................................................................GGACACGAGGTCATTAATGTTGGT...................................... 24 0 12 0.33 4 4 0 0 0 0
.....................................................................................................................................ACGAGGGCTTTAATGTTGGTGTTGT............................................................................................. 25 0 19 0.32 6 6 0 0 0 0
...................................................................................................................................................................ACGAGGGCTTTAATGTTGGTGTTGT............................................................... 25 0 19 0.32 6 6 0 0 0 0
....................ACGAGGGCTTTAATGTTGGTGTTGT.............................................................................................................................................................................................................. 25 0 19 0.32 6 6 0 0 0 0
............................................................................GGGCACGTGGACTTCAATGCTGGTGT..................................................................................................................................................... 26 0 7 0.29 2 2 0 0 0 0
........................................................................................................................................................................................................................GTTGGACACGTGGTCTTTAATGTTGAT........ 27 0 9 0.22 2 2 0 0 0 0
..............................................GGACACGTGGTCTTTAATGTTGATGTT.................................................................................................................................................................................. 27 0 9 0.22 2 2 0 0 0 0
...........................................................................................................................................................................................................................GGACACGTGGTCTTTAATGTTGATGTT..... 27 0 9 0.22 2 2 0 0 0 0
...........................................GTTGGACACGTGGTCTTTAATGTTGAT..................................................................................................................................................................................... 27 0 9 0.22 2 2 0 0 0 0
.....................CGAGGGCTTTAATGTTGGTGTTGTT............................................................................................................................................................................................................. 25 0 19 0.21 4 3 1 0 0 0
......................................................................................................................................CGAGGGCTTTAATGTTGGTGTTGTT............................................................................................ 25 0 19 0.21 4 3 1 0 0 0
....................................................................................................................................................................CGAGGGCTTTAATGTTGGTGTTGTT.............................................................. 25 0 19 0.21 4 3 1 0 0 0
.................................................................................................................................................................................................ACGAGGTCATTAATGTTGGTGTTGT................................. 25 0 12 0.17 2 2 0 0 0 0
.............................................................................................................................................................................................GGACACGAGGTCATTAATGTTGGTGT.................................... 26 0 12 0.17 2 2 0 0 0 0
............................................................................................................................................................................................TGGACACGAGGTCATTAATGTTGGTGT.................................... 27 0 12 0.17 2 2 0 0 0 0
....................................................................................................................................CACGAGGGCTTTAATGTTGGTGTTGT............................................................................................. 26 0 19 0.16 3 3 0 0 0 0
...................CACGAGGGCTTTAATGTTGGTGTTGT.............................................................................................................................................................................................................. 26 0 19 0.16 3 3 0 0 0 0
..................................................................................................................................................................CACGAGGGCTTTAATGTTGGTGTTGT............................................................... 26 0 19 0.16 3 3 0 0 0 0
.......................................CGCTGTTGGCCACGTGGTCT................................................................................................................................................................................................ 20 3 19 0.16 3 3 0 0 0 0
....................................................................................................................................................................................................................CGCTGTTGGCCACGTGGTCT................... 20 3 19 0.16 3 3 0 0 0 0
.........................................CTGTTGGCCACGTGGTCT................................................................................................................................................................................................ 18 2 20 0.15 3 3 0 0 0 0
......................................................................................................................................................................................................................CTGTTGGCCACGTGGTCT................... 18 2 20 0.15 3 3 0 0 0 0
...............................................................................................................................................................................................................................ACGTGGTCTTTAATGTTGATGTTGT... 25 0 7 0.14 1 1 0 0 0 0
..................................................ACGTGGTCTTTAATGTGGATGTTGT................................................................................................................................................................................ 25 1 7 0.14 1 1 0 0 0 0
.................................................................................................................................................................................................................................GTGGTCTTTAATGTTGATGTTGT... 23 0 7 0.14 1 1 0 0 0 0
................................................................................................................................................................................................................................CGTGGTCTTTAATGTTGATGTTTT... 24 1 7 0.14 1 0 1 0 0 0
...............................................................................................................................................................................................................................ACGTGGTCTTTAATGTGGATGTTGT... 25 1 7 0.14 1 1 0 0 0 0
..........................................................................TTGGGCACGTGGACTTCAATGCTGGT....................................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0
....................................................GTGGTCTTTAATGTTGATGTTGT................................................................................................................................................................................ 23 0 7 0.14 1 1 0 0 0 0
...................................................CGTGGTCTTTAATGTTGATGTTTT................................................................................................................................................................................ 24 1 7 0.14 1 0 1 0 0 0
.....................................................................GGTTGTTGGGCACGTGGACTTCAATGCT.......................................................................................................................................................... 28 1 7 0.14 1 1 0 0 0 0
..................................................ACGTGGTCTTTAATGTTGATGTTGT................................................................................................................................................................................ 25 0 7 0.14 1 1 0 0 0 0
....................................................................................GGACTTCAATGCTGGTGT..................................................................................................................................................... 18 0 8 0.13 1 1 0 0 0 0
......................................................GGTCTTTAATGTTGAGGTTGTTGG............................................................................................................................................................................. 24 1 8 0.13 1 1 0 0 0 0
...................................................................................................................................................................................................................................GGTCTTTAATGTTGAGGTTGTTGG 24 1 8 0.13 1 1 0 0 0 0
...............................................GACACGTGGTCTTTAATGTTGATGTT.................................................................................................................................................................................. 26 0 9 0.11 1 1 0 0 0 0
..........................................TGTTGGCCACGTGGTCTC............................................................................................................................................................................................... 18 2 18 0.11 2 2 0 0 0 0
............................................................................................................................................................................................................................GACACGTGGTCTTTAATGTTGATGTT..... 26 0 9 0.11 1 1 0 0 0 0
.......................................................................................................................................................................................................................TGTTGGCCACGTGGTCTC.................. 18 2 18 0.11 2 2 0 0 0 0
..................................................ACGTGGTCTTTAATGTTGATGTTG................................................................................................................................................................................. 24 0 9 0.11 1 1 0 0 0 0
...............................................................................................................................................................................................................................ACGTGGTCTTTAATGTTGATGTTG.... 24 0 9 0.11 1 1 0 0 0 0
....................................................................................................................................................................CGAGGGCTTTAATGTTGGTGTTGT............................................................... 24 0 19 0.11 2 2 0 0 0 0
.....................CGAGGGCTTTAATGTTGGTGTTGT.............................................................................................................................................................................................................. 24 0 19 0.11 2 2 0 0 0 0
......................................................................................................................................CGAGGGCTTTAATGTTGGTGTTGT............................................................................................. 24 0 19 0.11 2 2 0 0 0 0
...............................................................................................................................TTGGACACGAGGGCTTTAATGTTGGT.................................................................................................. 26 0 20 0.10 2 2 0 0 0 0
.............................................................................................................................................................TTGGACACGAGGGCTTTAATGTTGGT.................................................................... 26 0 20 0.10 2 2 0 0 0 0
.......................................................................................................................................................................................GTTGTTGGACACGAGGTCATTAATGG.......................................... 26 1 10 0.10 1 1 0 0 0 0
....................................................................................................................................................................................GGTGTTGTTGGACACGAGGTCAT................................................ 23 0 10 0.10 1 1 0 0 0 0
....................................................................................................................................................................................GGTGTTGTTGGACAGGAGGTCAT................................................ 23 1 10 0.10 1 1 0 0 0 0
....................................................................................................................................................................................GGTGTTGTTGGACACGAGGTCATTG.............................................. 25 1 10 0.10 1 1 0 0 0 0
..............TTGGACACGAGGGCTTTAATGTTGGT................................................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
..............................................GGACACGTGGTCTTTAATGTTTTTGT................................................................................................................................................................................... 26 2 11 0.09 1 0 1 0 0 0
........................................................................TGTTGGGCACGTGGACTTCAAT............................................................................................................................................................. 22 0 11 0.09 1 1 0 0 0 0
...........................................................................................................................................................................................................................GGACACGTGGTCTTTAATGTTTTTGT...... 26 2 11 0.09 1 0 1 0 0 0
..................................................................................................................................................................................................CGAGGTCATTAATGTTGGTGTTG.................................. 23 0 12 0.08 1 1 0 0 0 0
..................................................................................................................................................................................................CGAGGTCATTAATGTTGGTGTTGGT................................ 25 1 12 0.08 1 0 1 0 0 0
...................................................................................................................................................................................................GAGGTCATTAATGTTGGTGTTGT................................. 23 0 12 0.08 1 1 0 0 0 0
.......................................................................................................................................................................................................TCATTAATGTTGGTGTTGTT................................ 20 0 12 0.08 1 0 1 0 0 0
............................................................................................................................................................................................TGGACACGAGGTCATTAATGTTGGT...................................... 25 0 12 0.08 1 0 0 1 0 0
.............................................................................................................................................................................................GGACACGAGGTCATTAATGTTGGTGTT................................... 27 0 12 0.08 1 1 0 0 0 0
.....................................................................................................................................................................................................GGTCATTAATGTTGGTGTTGTTGG.............................. 24 0 12 0.08 1 1 0 0 0 0
.................................................................................................................................................................................................ACGAGGTCATTAATGTTGGTGTTGTT................................ 26 0 12 0.08 1 1 0 0 0 0
................................................................................................................................................................................................CACGAGGTCATTAATGTTGGTGTTGT................................. 26 0 12 0.08 1 1 0 0 0 0
...............................................................................................................................................................................................ACACGAGGTCATTAATGTTGGTGTTGT................................. 27 0 12 0.08 1 1 0 0 0 0
..................................................................................................................................................................................................CGAGGTCATTAATGTGGGTGTTGT................................. 24 1 12 0.08 1 1 0 0 0 0
...............................................................................................................................................................................................ACACGAGGTCATTAATGTTGGTGTTG.................................. 26 0 12 0.08 1 1 0 0 0 0
......................................GCGCTGTTGGCCACGTGGTCT................................................................................................................................................................................................ 21 3 13 0.08 1 1 0 0 0 0
...................................................................................................................................................................................................................GCGCTGTTGGCCACGTGGTCT................... 21 3 13 0.08 1 1 0 0 0 0
......................................................................................................................................................GGTGTTGTTGGACACGAGGGCTTT............................................................................. 24 0 18 0.06 1 1 0 0 0 0
.....................................................................................................................................................TGGTGTTGTTGGACACGAGGGCC............................................................................... 23 1 18 0.06 1 0 1 0 0 0
......TGGTGTTGTTGGACACGAGGGCC.............................................................................................................................................................................................................................. 23 1 18 0.06 1 0 1 0 0 0
...................................................................................................................................................................................................................GCGCTGTTGGCCACGTGGTC.................... 20 3 18 0.06 1 1 0 0 0 0
......................................GCGCTGTTGGCCACGTGGTC................................................................................................................................................................................................. 20 3 18 0.06 1 1 0 0 0 0
.......GGTGTTGTTGGACACGAGGGCTTT............................................................................................................................................................................................................................ 24 0 18 0.06 1 1 0 0 0 0
..................TCACGAGGGCTTTAATGTTGGTGTTGT.............................................................................................................................................................................................................. 27 1 19 0.05 1 1 0 0 0 0
......................GAGGGCTTTAATGTTGGTGTTGT.............................................................................................................................................................................................................. 23 0 19 0.05 1 0 1 0 0 0
....................................................................................................................................CACGAGGGCTCTAATGTTGGTGTTGTT............................................................................................ 27 1 19 0.05 1 0 1 0 0 0
.................................................................................................................................................................TCACGAGGGCTTTAATGTTGGTGTTGT............................................................... 27 1 19 0.05 1 1 0 0 0 0
..................ACACGAGGGCTTTAATGTTGGTGTTGT.............................................................................................................................................................................................................. 27 0 19 0.05 1 1 0 0 0 0
......................GAGGGCTTTAATGTTGGTGTTGTT............................................................................................................................................................................................................. 24 0 19 0.05 1 1 0 0 0 0
..................................................................................................................................................................CACGAGGGCTCTAATGTTGGTGTTGTT.............................................................. 27 1 19 0.05 1 0 1 0 0 0
...................................................................................................................................TCACGAGGGCTTTAATGTTGGTGTTGT............................................................................................. 27 1 19 0.05 1 1 0 0 0 0
.....................................................................................................................................ACGAGGGCTTTAATGTTGGTGTTGTT............................................................................................ 26 0 19 0.05 1 1 0 0 0 0
...................................................................................................................................ACACGAGGGCTTTAATGTTGGTGTTGT............................................................................................. 27 0 19 0.05 1 1 0 0 0 0
...................CACGAGGGCTCTAATGTTGGTGTTGTT............................................................................................................................................................................................................. 27 1 19 0.05 1 0 1 0 0 0
.....................................................................................................................................................................GAGGGCTTTAATGTTGGTGTTGTT.............................................................. 24 0 19 0.05 1 1 0 0 0 0
...................................................................................................................................................................ACGAGGGCTTTAATGTTGGTGTTGTT.............................................................. 26 0 19 0.05 1 1 0 0 0 0
.....................................................................................................................................................................GAGGGCTTTAATGTTGGTGTTGT............................................................... 23 0 19 0.05 1 0 1 0 0 0
...................................................................................................................................................................ACGAGGGCTTTAATGTTGGTGCTGT............................................................... 25 1 19 0.05 1 0 1 0 0 0
....................ACGAGGGCTTTAATGTTGGTGCTGT.............................................................................................................................................................................................................. 25 1 19 0.05 1 0 1 0 0 0
....................ACGAGGGCTTTAATGTTGGTGTTGTT............................................................................................................................................................................................................. 26 0 19 0.05 1 1 0 0 0 0
.................................................................................................................................................................ACACGAGGGCTTTAATGTTGGTGTTGT............................................................... 27 0 19 0.05 1 1 0 0 0 0
.......................................................................................................................................GAGGGCTTTAATGTTGGTGTTGTT............................................................................................ 24 0 19 0.05 1 1 0 0 0 0
.....................................................................................................................................ACGAGGGCTTTAATGTTGGTGCTGT............................................................................................. 25 1 19 0.05 1 0 1 0 0 0
.......................................................................................................................................GAGGGCTTTAATGTTGGTGTTGT............................................................................................. 23 0 19 0.05 1 0 1 0 0 0
...............TGGACACGAGGGCTTTAATGTTGGT................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................GGACACGAGGGCTTTAATGTTGGT.................................................................... 24 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................GGACACGAGGGCTTTAATGTTGGT.................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
..........................GCTTTAATGTTGGTGTTGTTGGACAC....................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.....................CGAGGGCTTTAATGTTGGT................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................GGGCTTTAATGTTGGTGTTGTTGG.......................................................................................... 24 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................TGGACACGAGGGCTTTAATGTTGGT.................................................................... 25 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................TCGGACACGCGGGCTTTA............................................................................ 18 2 20 0.05 1 0 0 0 0 1
...............................................................................................................................TCGGACACGCGGGCTTTA.......................................................................................................... 18 2 20 0.05 1 0 0 0 0 1
..............................................................................................................................GTTGGACACGAGGGCTTTAATGTT..................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
........................GGGCTTTAATGTTGGTGTTGTTGGACA........................................................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................TTGTTGGACACGAGGGCTTTAATGT........................................................................ 25 0 20 0.05 1 1 0 0 0 0
......................................GCGGTGTTGGCCACGTGGTC................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 1 0
....................................................................................................................................................................CGAGGGCTTTAATGTTGGT.................................................................... 19 0 20 0.05 1 1 0 0 0 0
................................................................................................................................TGGACACGAGGGCTTTAATGTTGGT.................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
..........................CCTTTAATGTTGGTGTTGTTGGAC......................................................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0
........................GGGCTTTAATGTTGGTGTTGTTGG........................................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................TGATGGACACGAGGGTTTTAATGT........................................................................ 24 2 20 0.05 1 1 0 0 0 0
..................................................................................................................................GACACGAGGGCTTTAATGTTGGTGT................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................GGGCTTTAATGTTGGTGTTGTTGGACA......................................................... 27 0 20 0.05 1 1 0 0 0 0
.............GTTGGACACGAGGGCTTTAATGTT...................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
................................................................................................................................TGGGGACGAGGGCTTCAATG....................................................................................................... 20 3 20 0.05 1 0 0 0 1 0
..............................................................................................................................................................TGGGGACGAGGGCTTCAATG......................................................................... 20 3 20 0.05 1 0 0 0 1 0
...........................................................................................................................................GCTTTAATGTTGGTGTTGTTGGACAC...................................................................................... 26 0 20 0.05 1 1 0 0 0 0
............................................................................................................................TTGTTGGACACGAGGGCTTTAATGT...................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................GACACGAGGGCTTTAATGTTGGTGT.................................................................. 25 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................CGAGGGCTTTAATGTTGGT.................................................................................................. 19 0 20 0.05 1 1 0 0 0 0
..............TCGGACACGCGGGCTTTA........................................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 1
................GGACACGAGGGCTTTAATGTTGGT................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................CCTTTAATGTTGGTGTTGTTGGAC.......................................................... 24 1 20 0.05 1 0 1 0 0 0
.......................................................................................................................................................................GGGCTTTAATGTTGGTGTTGTTGG............................................................ 24 0 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................................................................GCGGTGTTGGCCACGTGGTC.................... 20 3 20 0.05 1 0 0 0 1 0
............................................................................................................................................................GTTGGACACGAGGGCTTTAATGTT....................................................................... 24 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................TGATGGACACGAGGGTTTTAATGT...................................................................................................... 24 2 20 0.05 1 1 0 0 0 0
.................GACACGAGGGCTTTAATGTTGGTGT................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................GCTTTAATGTTGGTGTTGTTGGACAC........................................................ 26 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................GGGCTTTAATGTTGGTGTTGTTGGACA....................................................................................... 27 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2L:6759473-6759723 - dya_250 ATTACAACCACAACAACCTGTGCTCCCGAAATTA---CAACCACAACAACC------TGTGCACCAGAAATTACAACTAC------------------AACAACCCGTGCACCTG---------------------------AAGTTACGACCACAAAAAC-----CTGTGC---NNNNNNNNNNCAACAACCTGTGCTCCCGAAATTACAACCACAAC------------------------AAC------------------CTGTGCTC------------------CCGAAA---TTACAACCACAACAACCTGTGCTCCA------------------------GTAATTACA---ACCACA---ACAACCTGTG---CACCAGAA---ATTACAACTACAACAACC
droEre2 scaffold_4929:15079779-15080006 + ATTACAACTACAACACCGTGTACACCGGAAATTA---TAACTACAACAACC------TGTACACCAGAAATTACAACTAC------------------AACACCGTGTACACCGG---------------------------AAATTA------------------TAACTA-------------CAACAACCTGTACACCAGAAATTACAACTACAAC------------------------ACC------------------GTGTACAT------------------CGGAAA---TTATAACTACAACAACCTGTACACAA------------------------GAAATTACA---ACTACA---ACAGCCTGTA---CACCAGAA---ATTACAACTACGACAACC
droSec2 scaffold_5:4223030-4223239 + GTAACAACCACAACAACCTGTGCGCCAGAAATTA---CAACTACAACAACA------TGTACACCAGTAATTACAACTAC------------------AACAACCTGTGTACCAA---------------------------CAACCA-------------------------------------------------------------------CAACAACCTGTACACCAGTTTCGACAACAAC------------------ATGTACCC------------------CAGAAA---TTACAACTACAACAACCTGTACACCA------------------------------GCT---TCGACA---ACAACATGTA---CCCCAGAA---ATTACAACTACAACAACC
droSim2 2l:5949273-5949497 + ACGAC---CACAACAACCTGTACACCAG---------CTACCACAACAACA------TGTACTCCAGAAATTACAACTAC------------------AACAACCTGTGCACCAA---------------------------CAACCA------CAACAACCTGTGC---AC-------------CAACAACCAGTGCACC------AACAACCACAAC------------------------AAC------------------CTGTACAC------------------CAGCAATCGTAACAACCACAACAACCTGTGCTCCA------------------------GAAATAACA---ACTACA---ACAACATGTA---CACCAGAA---ATTACAACTACAACAACC
dm3 chr2L:6152480-6152698 + ATCATAACAACAACAACCTGTACACCAGCCAGCGTAACAACCACAACAACC------TGTGCACCAACA------ACCAC------------------TACAACCTGTGCACCAA---------------------------CAACCA-------------------------------------CAACAACCTGTGCACC------AACAACCACAACAACCTGTGCACCAACAACCACAACAAC------------------CTGTGCAC------------------CA---------ACAACCACAACAACCTGTGCACCA------------------------------ACA---ACCACT---ACAACCTGTG---CACCA---------ACAACCACAACAACC
droEug1 scf7180000409692:151985-152209 + ACTACAACCACCACTACTACTACTAC---AACGA---CAACTACCACAACT------TGTGCCCCAACAACA------------------------------ACCTCTACTACGA------------CAACCACCACTACTACTACTA------------------CGACAA-------------CTACAACATGTGCTCCAACCACTACAAGCACTAC------------------------CAC------------------CACCACTA------------------CCA------CAACAACAACTACAACATGCGCCCCA------------------------ACAAAAACA---ACTACCACGACTACTTGCG---CACC---A---ACTACAACTACAACGGCT
droBia1 scf7180000302136:2051354-2051584 - GTTACGACCACCACAGCCTGTGCTTCTGACATAA---GCACAAAAACAACCACAACATGCGCCCCAGAAACTTCGACTAC------------------AACAACATGCGCCCCAG---------------------------CAACTA------------------CGACTA-------------GTACAACCACTGAGGCTCCAACCACGACTACAAC------------------------AAC------------------ATGTACGC------------------CAA------CCACAACGACTACAACATGCGCCCCA------------------------GCCACTACT---ACTACA---ACAACCACTG---AGGCTCCA---ACCACGACTACAACAACA
droTak1 scf7180000413278:2009-2188 + ATCACAACAAC------ATGTGTGGAA------A---AAACCACAACAACC------TGTGTGCCAGAAACTACAACT------------------------ACCTCTGCATCCG---------------------------A-------------------------------------------------------------------GATCACAACAACTTGTGTGAAAAGAACCACAACAAC------------------CTGTGTTC------------------CAGAA---------ACTACAACAACCTCTGTGCTC------------------------------GAG---ACCACA---ACAACCTGTG---TTCCAGA---------AACTACAACAACC
droEle1 scf7180000491212:604216-604452 - ACGACAACGACAACCACCTGTGCCCCAACAACAA---CCACGACAACCACA------ACGACAACCACGACTACAACTAC------------------AACTACTTGTGCCCCAA---------------------------CAACAA------------------CCAGAA-------------CCACGACCACTGCGGCACCAACTACAACCACAAC------------------------AAC------------------ATGTGCCC------------------CAACAA---------CCACT---------TCCACTACGACAACCACAACCACTGCGGCACCAACTACA---ACCACA---ACAACATGTG---CCCCAACA---ACAACCACTACCACAACG
droRho1 scf7180000777200:116371-116582 - ACCACGACAACGACCACTGAGGCTCC---AACGA---CAACAACAACAACG------TGTGCCCCAACA---ACAACAAC------------------AACAACGTGTGCCCCAA---------------------------CAACAA---------------------CAA-------------CAACAACGTGTGCCCCAACAACAACAACAACAAC------------------------AAC------------------GTGTGCCC------------------CAA------CAACAACAACAACTACGTGTGCCCCA------------------------ACAACGACA---ACTACT---ACCAC---GA---CAACAACA---ACTACTACTACAACAAC-
droFic1 scf7180000454055:1142648-1142878 - ATAACCACCACCACAACCACTGAAGCTCCAACAA---CAACGACAACCACT------GAGGCTCC------AACCACAACAACGACTTGTACCCCAAAAGCAACGACAAC---------------------------------TACAA------------------CCACTT-------------GTGCACCAACAACAAC------GACAACCACAAC------------------------AAC------------------TTGTGCCC------------------CAACAACGACGACAACCACAACAACTTGTGCCCCA------------------------ACAAC---A---ACCACA---ACAACTTGTG---CACCAACAACAACGACAACCACAACGTCT
droKik1 scf7180000302684:1813197-1813424 - ACTGCTACAACAACAACGTGTACTACCACGACCG---CTACAACAACAACG------TGCACTACCACGACCGCTACAAC------------------AACAACGTGCACTACCA---------------------------CGACCG------------------CTACAA-------------CAACAACGTGCACTACCACGACCGCTACAACAAC------------------------AAC------------------GTGCACTA------------------CCACGA---CCGCTACAACAACAACGTGCACTACA------------------------ACAACTTCT---AAAACA---ACAACGTGCA---CTACCACG---ACCGCTACAACAACAACC
droAna3 scaffold_12916:8046346-8046547 - T--ACTACCACAACCACCTGTGAGCCTACTACAA---CAAGCACCACATCC------TGTGCGCC------TACTACCAC------------------AACCACCTGTGAGCCTA---------------------------CTACGA---------------------CAAGCA----------CCACATCCTGTGCGCC------TACTACCACAAC------------------------CAC------------------CTGTGAGC------------------CT---------ACTACCACAACAACCTGCGCGCCT------------------------------ACT---ACCACA---ACAACCTGTG---AGCCTACC---ACAACAACCACAACACCC
droBip1 scf7180000394737:15996-16232 - ACCACCACGACAACACCTTGTGCTCCGACAACGA---CTTCCACAACAACT------ACAACAACCACTACAACAACTAC------------------AACACCTTGTGCCCCTACAACGACTTCCA---------------CCACAA------------------CGACAA-------------CGACAACCACTACCAC------GACCACCACAAC------------------------AAC------------------TACTACAA------------------CAACCACCACCACAACTACAACACCTTGTGCCCCT------------------------ACAACGACT---TCCACT---ACAACGACAA---CCACAACA---ACAACAACTACAACAACC
dp5 4_group1:5090441-5090647 - ACGACAACTACAACTACTTGCTCGACAACAACAA---CCACGACGACAACC------ACTACAACAACAACCACGACTAC------------------AAC---------------------------------------------AA------------------CCACGA-------------CTACAACCACCACTACTACAACCACCACTACTAC---------------------------------------------AACCACAC------------------CAACAA---CGACAACTACAACTACTTGCTCGACA------------------------ACAACAACC---ACGACG---ACAACCACTA---CAACAACA---ACCACGACTACAACAACC
droPer2 scaffold_5:127960-128174 + ACCACGACAACAACAACCACTACAACTACAACCA---CGACAACAACAACC---------ACGACAACAACCACTACTAC------------------AACGACTTGCTCGCCAT---------------------------CAACTA------------------CCACAA-------------CAACCACGACCACTACG---ACAACCACCACGAC------------------------AAC------------------CACAACTA------------------CGACAA---CAACAACGACGACAACCACCACTACT------------------------ACAACCACC---ACTACG---ACAACCACCA---C------T---ACTACAACCACAACAAC-
droWil2 scf2_1100000000756:938-1167 + ACAACAACCACAACAACGACAACTAC---GACGA---CGACAACAACAACC------TGTAAACCAACAATAACAAGTAC----------------------------ACTACGA---------------------------CAACAA------------------CTACAA-------------CTACAACTACAACTACGACAACGACGACCACAAC------------------------AAC------------------ATGCAAACCAACGACAACGACATCAACAACTACTACAACTACAACTACAACCACAGCAAC------------------------------GACG---ACCACA---ACAACTTGCG---AACCAACA---CCAACGACAACAACAACT
droVir3 scaffold_13246:1773953-1774189 - ACCACCACTACAACAACCACTACTACAACAACCA---CTACTACAACAACCACAACCTGCACCAC------ACCCACAACAACCACTTGCACCACAACAACAACCACTACTACAA---------------------------CAACAA---------------------CCA-------------CTACAACAACCACTACTACAACAACGACAAC------------------------------------------------TACTACAA------------------CAACCACCACAACTACAACAACAACCTGCACCACA------------------------CCCACA---------ACA---ACCACTTGCACCACAACAACA---ACCACCACGACAACAACC
droMoj3 scaffold_6680:15459282-15459507 - T--ACCACAACTACAACCTGTACCACGACAACCA---CCACAACTACAACC------TGTACCACGACAACCACCACCAC------------------TACAACCTGTACCACGA---------------------------CAACCA------------------CCACAA-------------CTACAACCTGTACTACGACAACCACCACCACGAC------------------------AAC------------------TTGCACCA------------------CGACAA---CAACAAAAACAACAACTTGCACCACA------------------------ACAACAACA---AAAACG---ACAACTTGCA---CCACAACA---ACAACAAAAACAACAACA
droGri2 scaffold_14830:1818822-1819057 - ACAACCACAAC---AACCACAACAACCACAACAA---CTACAACAACAACT------TGCAAACCGACAACAACCACTAC------------------GACTACCACCACAACAA---------------------------CTACAA------------------CCACAA-------------CAACAACCACTACGAC------AACGACCACAAC------------------------AACTACAACCACAACAACAACTTGCAAAC------------------CGACAA------CAACCACTACGACTACCACCACA------------------------ACAACAACCACTACGACA---ACGACCACTA---CGACAACG---ACTACCACCACAACAAC-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
ATTACAACCACAACAACCTGTGCTCCCGAAATTA---CAACCACAACAACC------TGTGCACCAGAAATTACAACTAC------------------AACAACCCGTGCACCTG---------------------------AAGTTACGACCACAAAAAC-----CTGTGC---NNNNNNNNNNCAACAACCTGTGCTCCCGAAATTACAACCACAAC------------------------AAC------------------CTGTGCTC------------------CCGAAA---TTACAACCACAACAACCTGTGCTCCA------------------------GTAATTACA---ACCACA---ACAACCTGTG---CACCAGAA---ATTACAACTACAACAACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................CAACAACCTGTGCTCCA------------------------GT.............................................................19100.20200110000000
............................................................................................................................................................................................................................................................................................................TACAACCACAACAACCTGTGCTCCA------------------------GT.............................................................27100.20200110000000
............................................................................................................................................................................................................................................................................................................................TGTGCTCCA------------------------GTAATTACA---ACCACA---AC........................................26120.17202000000000
.................................................................................................................................................................................................................................................................................................................................TCCA------------------------GTAATTACA---ACCACA---ACAACCTG..................................27120.17202000000000
.........................................................................CAACTAC------------------AACAACCCGTGC..............................................................................................................................................................................................................................................................................................................1970.14100100000000
......................................AACCACAACAACC------TGTGCACCAGAAAT.....................................................................................................................................................................................................................................................................................................................................................2790.11101000000000
.....................................................................................................................................................................................................................................................................................................................................................................A---ACCACA---ACAACCTGTG---CACCAGAA---AT................2790.11101000000000
.....................................................................................................................................................................................................................................................................................................................AACAACCTGTGCTCCA------------------------GTA............................................................19100.10100100000000
.........................................................................................................................................................................................CAACAACCTGTGCTCCCGAAAT.............................................................................................................................................................................................................22200.10200200000000
.................................................................................................................................................................................................................................................................................................................CCACAACAACCTGTGCTCCA------------------------GT.............................................................22100.10100100000000
....................................................................................................................................................................................................................................................................................................................CAACAACCTGTGCTCCA------------------------GTAATTACA---AC.................................................28100.10100100000000
.....................................................................................................................................................................................................................................................................................................................AACAACCTGTGCTCCA------------------------GTAATTACA---AC.................................................27100.10100100000000
.............................................................................................................................................................................................................................................................................................................ACAACCACAACAACCTGTGCTCCA------------------------GT.............................................................26100.10101000000000
................................................................................................................................................................................................................................................................................................................ACCACAACAACCTGTGCTCCA------------------------GTA............................................................24100.10101000000000
.......................................................................................................................................................................................................................CAAC------------------------AAC------------------CTGTGCTC------------------CCGAAA---T................................................................................................................22200.10200200000000
..............................ATTA---CAACCACAACAACC------TGTGCACC...........................................................................................................................................................................................................................................................................................................................................................26100.10101000000000
..................................................................................................................................................................................................................................................................................................................CACAACAACCTGTGCTCCA------------------------GT.............................................................21100.10100100000000
..........CAACAACCTGTGCTCCCGAAAT............................................................................................................................................................................................................................................................................................................................................................................................22200.10200200000000
................................................................................................................................................................................................................................................................................................................................................................ATTACA---ACCACA---ACAACCTGTG---CACC.........................26100.10101000000000
..................................................................................................................................................................................................................................................................................................................CACAACAACCTGTGCTCCA------------------------GTAATTAC.......................................................27100.10100100000000
.....................................................................................................................................................................................................................................................................................................................................................................A---ACCACA---ACAACCTGTG---CACCA........................22120.08101000000000
......................................AACCACAACAACC------TGTGCACCA..........................................................................................................................................................................................................................................................................................................................................................22120.08101000000000
...............................................................................................................................................................................................................................................................................................................................GCTCCA------------------------GTAATTACA---ACCACA---ACAACC....................................27120.08100100000000
...................................................................................................................................................................................................................................................................................................................................................................ACA---ACCACA---ACAACCTGTG---CAC..........................22120.08100100000000
.................................A---CAACCACAACAACC------TGTGCAC............................................................................................................................................................................................................................................................................................................................................................22120.08100100000000
............................................................................................................................................................................................................................................................................................................TACAACCACAACAACCTGTGCTCCA------------------------GC.............................................................27140.07100100000000
................................................................................................................................................................................................................................................................................................................ACCACAACAACCTGTGCTCCA------------------------...............................................................21140.07101000000000
..................................................................................................................................................................................................................AACCACAAC------------------------AAC------------------CTGTGCTC------------------CCGAAA---T................................................................................................................27170.06101000000000
..TACAACCACAACAACCTGTGCTCCC.................................................................................................................................................................................................................................................................................................................................................................................................25170.06101000000000
...............................................................................................................................................................................................................TACAACCACAAC------------------------AAC------------------CTGTGCTC------------------CC........................................................................................................................25170.06101000000000
.....AACCACAACAACCTGTGCTCCCGAAAT............................................................................................................................................................................................................................................................................................................................................................................................27170.06101000000000
.....................................................................................................................................................................................................................CACAAC------------------------AAC------------------CTGTGCTC------------------CCGA......................................................................................................................21180.06100100000000
...................................................................................................................................................................................................................ACCACAAC------------------------AAC------------------CTGTGCTC------------------CCGA......................................................................................................................23180.06101000000000
........CACAACAACCTGTGCTCCCGAAA.............................................................................................................................................................................................................................................................................................................................................................................................23180.06100100000000
....................................................................................................................................................................................................................CCACAAC------------------------AAC------------------CTGTGCTC------------------CCGAA.....................................................................................................................23180.06101000000000
.....................................................................................................................................................................................................................CACAAC------------------------AAC------------------CTGTGCTC------------------CCGAAA---TT...............................................................................................................25180.06100010000000
.....................................................................................................................................................................................................................CACAAC------------------------AAC------------------CTGTGCTC------------------CCGAAA---.................................................................................................................23180.06100100000000
........CACAACAACCTGTGCTCCCGAAATT...........................................................................................................................................................................................................................................................................................................................................................................................25180.06100010000000
........CACAACAACCTGTGCTCCCGA...............................................................................................................................................................................................................................................................................................................................................................................................21180.06100100000000
.......CCACAACAACCTGTGCTCCCGAA..............................................................................................................................................................................................................................................................................................................................................................................................23180.06101000000000
......ACCACAACAACCTGTGCTCCCGA...............................................................................................................................................................................................................................................................................................................................................................................................23180.06101000000000
........................................................................................................................................................................................................................AAC------------------------AAC------------------CTGTGCTC------------------CCGAAA---TTACAAC..........................................................................................................27200.05100100000000
..............................................................................................................................................................................................................TTACAACCACAAC------------------------AAC------------------CTGC................................................................................................................................................20200.05100100000000
.............................................................................................................................................................................................................................................................................................................ACAACCACAACAACCTGTGCTCC........................................................................................23200.05100100000000
..........CAACAACCTGTGCTCCCGAAATT...........................................................................................................................................................................................................................................................................................................................................................................................23200.05100100000000
..................................................................................................................................................................................................................................................................................................................................................................TACA---ACCACA---ACAACCTGTG---.............................20200.05100100000000
..............................................................................................................................................................................................................................................................................................................CAACCACAACAACCTGTGCTCC........................................................................................22200.05100100000000
..........CAACAACCTGTGCTCCCGAAATTA---C......................................................................................................................................................................................................................................................................................................................................................................................25200.05100100000000
..............AACCTGTGCTCCCGAAATT...........................................................................................................................................................................................................................................................................................................................................................................................19200.05100100000000
.........................................................................................................................................................................................CAACAACCTGTGCTCCCGAAA..............................................................................................................................................................................................................21200.05100100000000
....CAACCACAACAACCTGTGCTCC..................................................................................................................................................................................................................................................................................................................................................................................................22200.05100100000000
...............................................................................................................................................................................................................TACAACCACAAC------------------------AAC------------------CTGT................................................................................................................................................19200.05100010000000
....................................................................................................................................................................................................................................................................................................GAAA---TTACAACCACAACAACC................................................................................................21200.05100100000000
.............................................................................................................................................................................................AACCTGTGCTCCCGAAATT............................................................................................................................................................................................................19200.05100100000000
..........CAACAACCTGTGCTCCCGAAA.............................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
..............................................................................................................................................................................................................TTACAACCACAAC------------------------AAC------------------CTGT................................................................................................................................................20200.05100010000000
..........................................................................................................................................................................................AACAACCTGTGCTCCCGAAATTACAAC.......................................................................................................................................................................................................27200.05100100000000
.......................................................................................................................................................................................................................CAAC------------------------AAC------------------CTGTGCTC------------------CCGAAA---.................................................................................................................21200.05100100000000
.........................................................................................................................................................................................................................................................................TGTGCTC------------------CCGAAA---TTACAAC..........................................................................................................20200.05100100000000
.......................................................................................................................................................................................................................CAAC------------------------AAC------------------CTGTGCTC------------------CCGA......................................................................................................................19200.05100010000000
..................................................................................................................................................................................................................................................................................................................................................................TACA---ACCACA---ACAACCTGC.................................19200.05100100000000
.......................................................................................................................................................................................................................CAAC------------------------AAC------------------CTGTGCTC------------------CCGAAA---TTAC.............................................................................................................25200.05100100000000
.................................................................................................................................................................................................................CAACCACAAC------------------------AAC------------------CTGTGCTC------------------C.........................................................................................................................22200.05100100000000
...............................................................................................................................................................................................................................................................................................................................................................AATTACA---ACCACA---ACAACCT...................................20200.05100100000000
...................................................................................................................................................................................................................................................AAC------------------CTGTGCTC------------------CCGAAA---TT...............................................................................................................19200.05100100000000
..TACAACCACAACAACCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010000000
.................................................................................................................................................................................................................................................................................................................................................................TTACA---ACCACA---ACAACCTGC.................................20200.05100100000000
.........ACAACAACCTGTGCTCCCGAA..............................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
...........AACAACCTGTGCTCCCGAAATTA---CAAC...................................................................................................................................................................................................................................................................................................................................................................................27200.05100100000000
.................................................................................................................................................................................................TGTGCTCCCGAAATTACAAC.......................................................................................................................................................................................................20200.05100100000000
.................................................................................................................................................................................................................................................................................................................................................................TTACA---ACCACA---ACAACCTGT.................................20200.05100010000000
.........................................................................................................................................................................................CAACAACCTGTGCTCCCGAAATT............................................................................................................................................................................................................23200.05100100000000
.........................................................................................................................................................................................CAACAACCTGTGCTCCCGA................................................................................................................................................................................................................19200.05100010000000
..........CAACAACCTGTGCTCCCGA...............................................................................................................................................................................................................................................................................................................................................................................................19200.05100010000000
...ACAACCACAACAACCTGTGCTCC..................................................................................................................................................................................................................................................................................................................................................................................................23200.05100100000000
.........................................................................................................................................................................................CAACAACCTGTGCTCCCGAAATTAC..........................................................................................................................................................................................................25200.05100100000000
......................................................................................................................................................................................................................ACAAC------------------------AAC------------------CTGTGCTC------------------CCGAA.....................................................................................................................21200.05100100000000
............................................................................................................................................................................................................AATTACAACCACAAC------------------------AAC------------------CT..................................................................................................................................................20200.05100100000000
.......................................................................................................................................................................................................................CAAC------------------------AAC------------------CTGTGCTC------------------CCGAAA---TT...............................................................................................................23200.05100100000000
............................................................................................................................................................................................................................................................................................................TACAACCACAACAACCTGT.............................................................................................19200.05100010000000
...............................................................................................................................................................................................................TACAACCACAAC------------------------AAC------------------CTGTGCTC------------------C.........................................................................................................................24200.05101000000000
...........................GAAATTA---CAACCACAACAACC------...................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
droEre2
ATTACAACTACAACACCGTGTACACCGGAAATTA---TAACTACAACAACC------TGTACACCAGAAATTACAACTAC------------------AACACCGTGTACACCGG---------------------------AAATTA------------------TAACTA-------------CAACAACCTGTACACCAGAAATTACAACTACAAC------------------------ACC------------------GTGTACAT------------------CGGAAA---TTATAACTACAACAACCTGTACACAA------------------------GAAATTACA---ACTACA---ACAGCCTGTA---CACCAGAA---ATTACAACTACGACAACCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................TACA---ACTACA---ACAGCCTGT.................................1911.0010100000
............................................................................................................................................................................................................................................................................ACAT------------------CGGAAA---TTATAACTAC.......................................................................................................2011.0010100000
.............................................................................................................................................................................................................................................................................CAT------------------CGGAAA---TTATAACTACAACAACCTGT.............................................................................................2911.0010100000
................................................................................................................................................................................................................................................................................................................................CACAA------------------------GAAATTACA---ACTACA---ACAGCCT...................................2711.0010001000
............................................................................................................................................................................................................................................................................ACAT------------------CGGAAA---TTATAACTACAAC....................................................................................................2311.0010100000
...............................................................................................................................................................................................................................................................................................................................................................AATTACA---ACTACA---ACAGCCTGT.................................2211.0010100000
...................................................................................................................................................A------------------TAACTA-------------CAACAACCTGTAC......................................................................................................................................................................................................................2050.4020200000
.................................A---TAACTACAACAACC------TGTAC..............................................................................................................................................................................................................................................................................................................................................................2050.4020200000
.............................................................................................................................................................................................................................................................................................................ATAACTACAACAACCTGTAC...........................................................................................2050.4020200000
...............................................................................................................................................................................................................................................................................................................................ACACAA------------------------GAAATTACA---ACTACA---AC........................................2330.3310100000
.....................................................................ATTACAACTAC------------------AACACCGTGTACACC...........................................................................................................................................................................................................................................................................................................2640.2510100000
............................................................................................................ACACCGG---------------------------AAATTA------------------TAACTA-------------CAACAACC...........................................................................................................................................................................................................................2740.2510100000
....................................................................................................................................................................................................................................................................................................................CAACAACCTGTACACAA------------------------GAAATTACA---AC.................................................2840.2510100000
.......CTACAACACCGTGTACACCGGAAATT...........................................................................................................................................................................................................................................................................................................................................................................................2640.2510001000
............................................................................CTAC------------------AACACCGTGTACACCGG---------------------------AAATT.........................................................................................................................................................................................................................................................................2640.2510001000
......................................................................TTACAACTAC------------------AACACCGTGTACACCGG---------------------------A.............................................................................................................................................................................................................................................................................2840.2510001000
.........................................................................CAACTAC------------------AACACCGTGTACACCGG---------------------------..............................................................................................................................................................................................................................................................................2440.2510100000
....CAACTACAACACCGTGTACACCGG................................................................................................................................................................................................................................................................................................................................................................................................2440.2510100000
......................CACCGGAAATTA---TAACTACAACAACC------T..................................................................................................................................................................................................................................................................................................................................................................2740.2510100000
..............................................................................AC------------------AACACCGTGTACACCGG---------------------------AAATT.........................................................................................................................................................................................................................................................................2440.2510100000
.....................ACACCGGAAATTA---TAACTACAACAACC------...................................................................................................................................................................................................................................................................................................................................................................2740.2510100000
.........ACAACACCGTGTACACCGGAAATT...........................................................................................................................................................................................................................................................................................................................................................................................2440.2510100000
.TTACAACTACAACACCGTGTACACCGGA...............................................................................................................................................................................................................................................................................................................................................................................................2840.2510001000
.............................................................................................................CACCGG---------------------------AAATTA------------------TAACTA-------------CAACAACCT..........................................................................................................................................................................................................................2740.2510100000
ATTACAACTACAACACCGTGTACACC..................................................................................................................................................................................................................................................................................................................................................................................................2640.2510100000
............................................................................................................................................................................................................................................................................................................TATAACTACAACAACCTGTACAC.........................................................................................2350.2010100000
..................................................................................................................................................TA------------------TAACTA-------------CAACAACCTGT........................................................................................................................................................................................................................1950.2010100000
............................................................................................................................................................................................................................................................................................................TATAACTACAACAACCTGT.............................................................................................1950.2010100000
.............................................................CACCAGAAATTACAACTAC------------------AAC.......................................................................................................................................................................................................................................................................................................................2250.2010100000
..........................................................................................................................................................................................AACAACCTGTACACCAGAAATTAC..........................................................................................................................................................................................................2450.2010100000
..............................................................................................................................................................................................................TTACAACTACAAC------------------------ACC------------------GTGT................................................................................................................................................2050.2010001000
......................................................................TTACAACTAC------------------AACACCGTGT................................................................................................................................................................................................................................................................................................................2050.2010001000
...........................................CAACAACC------TGTACACCAGA........................................................................................................................................................................................................................................................................................................................................................1950.2010001000
..................................................................................................................................................TA------------------TAACTA-------------CAACAACCTGTACAC....................................................................................................................................................................................................................2350.2010100000
.......................................................................................................................................................................................................CCAGAAATTACAACTACAAC------------------------ACC------------------GTGTAC..............................................................................................................................................2950.2010100000
..........................................................................................................................................................................................AACAACCTGTACACCAGAAATTACAACT......................................................................................................................................................................................................2850.2010100000
.....................................................................ATTACAACTAC------------------AACACCGC..................................................................................................................................................................................................................................................................................................................1950.2010100000
...................................................................................................................................................A------------------TAACTA-------------CAACAACCTGTA.......................................................................................................................................................................................................................1950.2010100000
............................................................................................................................................................................................................AATTACAACTACAAC------------------------ACC------------------GTGT................................................................................................................................................2250.2010001000
...............................................................................................................................................AATTA------------------TAACTA-------------CAACAACCT..........................................................................................................................................................................................................................2050.2010100000
............................................................ACACCAGAAATTACAACTAC------------------AACACC....................................................................................................................................................................................................................................................................................................................2650.2010100000
................................................................................................................................................ATTA------------------TAACTA-------------CAACAACCTGT........................................................................................................................................................................................................................2150.2010100000
......................................................................................................................................................................................................................................................................................................AA---TTATAACTACAACAACCTGT.............................................................................................2250.2010001000
................................TA---TAACTACAACAACC------TGTACAC............................................................................................................................................................................................................................................................................................................................................................2350.2010100000
....................................................................................................................................................................................................ACACCAGAAATTACAACTACAAC------------------------ACC------------------....................................................................................................................................................2650.2010100000
.................................A---TAACTACAACAACC------TGTA...............................................................................................................................................................................................................................................................................................................................................................1950.2010100000
.....................................................................ATTACAACTAC------------------AACACCGTGT................................................................................................................................................................................................................................................................................................................2150.2010100000
ATTACAACTACAACACCGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................2150.2010100000
.............................AATTA---TAACTACAACAACC------T..................................................................................................................................................................................................................................................................................................................................................................2050.2010100000
..............................ATTA---TAACTACAACAACC------TGT................................................................................................................................................................................................................................................................................................................................................................2150.2010100000
.............................AATTA---TAACTACAACAACC------TGT................................................................................................................................................................................................................................................................................................................................................................2250.2010001000
ATTACAACTACAACACCGC.........................................................................................................................................................................................................................................................................................................................................................................................................1950.2010100000
.............................................................................................................................................................................................................................................................................................................ATAACTACAACAACCTGTA............................................................................................1950.2010100000
.............................................................................................................................................................................................................ATTACAACTACAAC------------------------ACC------------------GTGT................................................................................................................................................2150.2010100000
.....................................................................................................................................................................................................CACCAGAAATTACAACTACAAC------------------------.........................................................................................................................................................................2250.2010100000
......................................................................................................................................................................................................................................................................................................AA---TTATAACTACAACAACCT...............................................................................................2050.2010100000
.TTACAACTACAACACCGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................2050.2010001000
................................TA---TAACTACAACAACC------TGT................................................................................................................................................................................................................................................................................................................................................................1950.2010100000
.............................................................................................................................................................................................................ATTACAACTACAAC------------------------ACC------------------GC..................................................................................................................................................1950.2010100000
............................................AACAACC------TGTACACCAGAAATTACAACT..............................................................................................................................................................................................................................................................................................................................................2850.2010100000
....................................................................AATTACAACTAC------------------AACACCGTGT................................................................................................................................................................................................................................................................................................................2250.2010001000
...............................................................................................................................................AATTA------------------TAACTA-------------CAACAACCTGT........................................................................................................................................................................................................................2250.2010001000
.......................................................................................................................................................................................................................................................................................................A---TTATAACTACAACAACCTGT.............................................................................................2150.2010100000
...............................................................CCAGAAATTACAACTAC------------------AACACCGTGTAC..............................................................................................................................................................................................................................................................................................................2950.2010100000
.........................................................................................................................................................................................CAACAACCTGTACACCAGA................................................................................................................................................................................................................1950.2010001000
............................................AACAACC------TGTACACCAGAAATTAC..................................................................................................................................................................................................................................................................................................................................................2450.2010100000
................................................................................................................................................................................................CTGTACACCAGAAATTACAACTA.....................................................................................................................................................................................................2360.1710100000
.......................................................................................................................................................................................................................................................................................................................................................................................CTGTA---CACCAGAA---ATTACAACTA........2360.1710100000
..................................................C------TGTACACCAGAAATTACAACTA.............................................................................................................................................................................................................................................................................................................................................2360.1710100000
droSec2
GTAACAACCACAACAACCTGTGCGCCAGAAATTA---CAACTACAACAACA------TGTACACCAGTAATTACAACTAC------------------AACAACCTGTGTACCAA---------------------------CAACCA-------------------------------------------------------------------CAACAACCTGTACACCAGTTTCGACAACAAC------------------ATGTACCC------------------CAGAAA---TTACAACTACAACAACCTGTACACCA------------------------------GCT---TCGACA---ACAACATGTA---CCCCAGAA---ATTACAACTACAACAACCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................CCAGTAATTACAACTAC------------------AACAACCTGT................................................................................................................................................................................................................................................................................................................2711.0010010
.........ACAACAACCTGTGCGCCA.................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.....................................................................................................................................................................................................................................................................................................................AACAACCTGTACACCA------------------------------GCT---T..................................................2011.0010010
GTAACAACCACAACAACCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................2120.5010010
.................................................................................................................AA---------------------------CAACCA-------------------------------------------------------------------CAACAACCTGT..........................................................................................................................................................................................1960.1710010
..AACAACCACAACAACCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................1960.1710010
droSim2
ACGAC---CACAACAACCTGTACACCAG---------CTACCACAACAACA------TGTACTCCAGAAATTACAACTAC------------------AACAACCTGTGCACCAA---------------------------CAACCA------CAACAACCTGTGC---AC-------------CAACAACCAGTGCACC------AACAACCACAAC------------------------AAC------------------CTGTACAC------------------CAGCAATCGTAACAACCACAACAACCTGTGCTCCA------------------------GAAATAACA---ACTACA---ACAACATGTA---CACCAGAA---ATTACAACTACAACAACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................AACAACCTGTGC---AC-------------CAACAACCAGTGCA.....................................................................................................................................................................................................................2811.00100100000000000000
..........................................................................................................................................................................................................................................................................................................GTAACAACCACAACAACCT...............................................................................................1950.60300300000000000000
ACGAC---CACAACAACCTGTACACCAG---------C......................................................................................................................................................................................................................................................................................................................................................................................2620.50100000010000000000
.CGAC---CACAACAACCTGTACACC..................................................................................................................................................................................................................................................................................................................................................................................................2220.50100100000000000000
............................................................................................................................................................................................................................................................................ACAC------------------CAGCAATCGTAACAAC..........................................................................................................2050.40200200000000000000
..........................................................................................................................................................................................................................................................................................................GTAACAACCACAACAACC................................................................................................1850.40200200000000000000
.....................ACACCAG---------CTACCACAACAACA------TG.................................................................................................................................................................................................................................................................................................................................................................2330.33100000000000100000
......................................................................................................................................................................................................................................................................................................AATCGTAACAACCACAACAACCTGT.............................................................................................2540.25100100000000000000
.........................................................................................................................................................................................................................................................................................................CGTAACAACCACAACAACCTG..............................................................................................2150.20100100000000000000
.....................................................................................................................................................................................................CACC------AACAACCACAAC------------------------AAC------------------CTGTACAC------------------C.........................................................................................................................2850.20100100000000000000
..........................................................................................................................................................................................................................................................................................................GTAACAACCACAACAACCTG..............................................................................................2050.20100100000000000000
........................................................................................................................................................................................................................AAC------------------------AAC------------------CTGTACAC------------------CAGCAATCGT................................................................................................................2450.20100100000000000000
.........................................................................................................................................................................................................................................................................TGTACAC------------------CAGCAATCGTAACAACCA........................................................................................................2550.20100000000001000000
.............................................................................................................................................................................................................................................................................CAC------------------CAGCAATCGTAACAACCA........................................................................................................2150.20100000000000100000
..........................................................................................................................................................................................................................................................................GTACAC------------------CAGCAATCGTAAC.............................................................................................................1950.20100100000000000000
........................................................................................................................................................................................................................AAC------------------------AAC------------------CTGTACAC------------------CAGCAATC..................................................................................................................2250.20100000000000100000
..........................................................................................................................................................................................................................C------------------------AAC------------------CTGTACAC------------------CAGCAATCGT................................................................................................................2250.20100100000000000000
......................................................................................................................................................................................................................ACAAC------------------------AAC------------------CTGTACAC------------------CAGCAATCGT................................................................................................................2650.20100100000000000000
....................................................................................................................................................................................................GCACC------AACAACCACAAC------------------------AAC------------------CTGTA...............................................................................................................................................2550.20100000000000100000
.....................................................................ATTACAACTAC------------------AACAACCTGT................................................................................................................................................................................................................................................................................................................21120.17200100000000100000
.....................................................................ATTACAACTAC------------------AACAACCTG.................................................................................................................................................................................................................................................................................................................20130.15200200000000000000
..........................................................................AACTAC------------------AACAACCTGTGCACC...........................................................................................................................................................................................................................................................................................................21100.10100000000000100000
......................................................................TTACAACTAC------------------AACAACCTGT................................................................................................................................................................................................................................................................................................................20120.08100100000000000000
.....................................................................ATTACAACTAC------------------AACAACCTGG................................................................................................................................................................................................................................................................................................................21130.08100100000000000000
............................................................................................................................................................................................................................................................................................................AACAACCACAACAACCTGT.............................................................................................19150.07100100000000000000
...............................................................................................................................................................................................................AACAACCACAAC------------------------AAC------------------CTGT................................................................................................................................................19150.07100100000000000000
.................................................................................................................AA---------------------------CAACCA------CAACAACCTGT.......................................................................................................................................................................................................................................................19150.07100100000000000000
.................................................................................................................AA---------------------------CAACCA------CAACAACCTGC.......................................................................................................................................................................................................................................................19180.06100100000000000000
............................................................................................................................................................................................................................................................................................................AACAACCACAACAACCTGC.............................................................................................19180.06100100000000000000
...............................................................................................................................................................................................................AACAACCACAAC------------------------AAC------------------CTGC................................................................................................................................................19180.06100100000000000000
dm3
ATCATAACAACAACAACCTGTACACCAGCCAGCGTAACAACCACAACAACC------TGTGCACCAACA------ACCAC------------------TACAACCTGTGCACCAA---------------------------CAACCA-------------------------------------CAACAACCTGTGCACC------AACAACCACAACAACCTGTGCACCAACAACCACAACAAC------------------CTGTGCAC------------------CA---------ACAACCACAACAACCTGTGCACCA------------------------------ACA---ACCACT---ACAACCTGTG---CACCA---------ACAACCACAACAACCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................GTAACAACCACAACAACC------TGT................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGCCAGCGTAACAACCACA...............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................GCACCAA---------------------------CAACCA-------------------------------------CAACAACCTGT........................................................................................................................................................................................................................24200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................GCACC------AACAACCACAACAACCTGT..........................................................................................................................................................................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CCAGCGTAACAACCACAAAGC...........................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCACCA------------------------------ACA---ACCACT---ACAACCTGTG---C............................26190.1630000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GCACCAACA------ACCAC------------------TACAACCTGTGC..............................................................................................................................................................................................................................................................................................................26190.1630000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................GCACC------AACAACCACAACAACCT............................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................ACAACAACCTGTGCACCA------------------------------ACA---ACCA...............................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GCACCAACAACCACAACAAC------------------CT..................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................ACAACAAC------------------CTGTGCAC------------------CA---------ACAACCA........................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................ACAACCTGTGCACCAA---------------------------CAACCA-------------------------------------...................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................ACAACAACCTGTGCACCAACAACCA.............................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ACAACCTGTG---CACCA---------ACAACCA........22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................A-------------------------------------CAACAACCTGTGCACC------AACAACCA.....................................................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GCACCAACA------ACCAC------------------TACAACCTGTGCA.............................................................................................................................................................................................................................................................................................................27190.1120000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCACCA------------------------------ACA---ACCACT---ACAACCTGTG---CA...........................27190.1120000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GCACCAACA------ACCAC------------------TACAACCTGT................................................................................................................................................................................................................................................................................................................24200.1020000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GCACCAACAACCACAACAAC------------------CTGT................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................T---ACAACCTGTG---CACCA---------ACA............19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................GCACCAA---------------------------CAACCA-------------------------------------CAACAACCT..........................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TACAACCTGTGCACCAA---------------------------CA............................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GCAC------------------CA---------ACAACCACAACAACCT...............................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GCAC------------------CA---------ACAACCACAACAACCTGT.............................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCACCA------------------------------ACA---ACCACT---ACAACCTGT.................................24200.1020000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CACCA------------------------------ACA---ACCACT---ACAACCTGTG---CACC.........................28190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CACCA------------------------------ACA---ACCACT---ACAACCTGTG---C............................25190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CACCAACA------ACCAC------------------TACAACCTGTGC..............................................................................................................................................................................................................................................................................................................25190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CACCAACA------ACCAC------------------TACAACCTGTGCACC...........................................................................................................................................................................................................................................................................................................28190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................ACCA-------------------------------------CAACAACCTGTGCACC------AACAACC......................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ACAACCTGTGCACCAACAAC...............................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................GCACCAA---------------------------CAACCA-------------------------------------CAACAACC...........................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GCAC------------------CA---------ACAACCACAACA...................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droEug1
ACTACAACCACCACTACTACTACTAC---AACGA---CAACTACCACAACT------TGTGCCCCAACAACA------------------------------ACCTCTACTACGA------------CAACCACCACTACTACTACTA------------------CGACAA-------------CTACAACATGTGCTCCAACCACTACAAGCACTAC------------------------CAC------------------CACCACTA------------------CCA------CAACAACAACTACAACATGCGCCCCA------------------------ACAAAAACA---ACTACCACGACTACTTGCG---CACC---A---ACTACAACTACAACGGCTSizeHit CountTotal NormTotal
No Reads
droBia1
GTTACGACCACCACAGCCTGTGCTTCTGACATAA---GCACAAAAACAACCACAACATGCGCCCCAGAAACTTCGACTAC------------------AACAACATGCGCCCCAG---------------------------CAACTA------------------CGACTA-------------GTACAACCACTGAGGCTCCAACCACGACTACAAC------------------------AAC------------------ATGTACGC------------------CAA------CCACAACGACTACAACATGCGCCCCA------------------------GCCACTACT---ACTACA---ACAACCACTG---AGGCTCCA---ACCACGACTACAACAACASizeHit CountTotal NormTotal
No Reads
droTak1
ATCACAACAAC------ATGTGTGGAA------A---AAACCACAACAACC------TGTGTGCCAGAAACTACAACT------------------------ACCTCTGCATCCG---------------------------A-------------------------------------------------------------------GATCACAACAACTTGTGTGAAAAGAACCACAACAAC------------------CTGTGTTC------------------CAGAA---------ACTACAACAACCTCTGTGCTC------------------------------GAG---ACCACA---ACAACCTGTG---TTCCAGA---------AACTACAACAACCSizeHit CountTotal NormTotal
No Reads
droEle1
ACGACAACGACAACCACCTGTGCCCCAACAACAA---CCACGACAACCACA------ACGACAACCACGACTACAACTAC------------------AACTACTTGTGCCCCAA---------------------------CAACAA------------------CCAGAA-------------CCACGACCACTGCGGCACCAACTACAACCACAAC------------------------AAC------------------ATGTGCCC------------------CAACAA---------CCACT---------TCCACTACGACAACCACAACCACTGCGGCACCAACTACA---ACCACA---ACAACATGTG---CCCCAACA---ACAACCACTACCACAACGSizeHit CountTotal NormTotal
No Reads
droRho1
ACCACGACAACGACCACTGAGGCTCC---AACGA---CAACAACAACAACG------TGTGCCCCAACA---ACAACAAC------------------AACAACGTGTGCCCCAA---------------------------CAACAA---------------------CAA-------------CAACAACGTGTGCCCCAACAACAACAACAACAAC------------------------AAC------------------GTGTGCCC------------------CAA------CAACAACAACAACTACGTGTGCCCCA------------------------ACAACGACA---ACTACT---ACCAC---GA---CAACAACA---ACTACTACTACAACAAC-SizeHit CountTotal NormTotal
No Reads
droFic1
ATAACCACCACCACAACCACTGAAGCTCCAACAA---CAACGACAACCACT------GAGGCTCC------AACCACAACAACGACTTGTACCCCAAAAGCAACGACAAC---------------------------------TACAA------------------CCACTT-------------GTGCACCAACAACAAC------GACAACCACAAC------------------------AAC------------------TTGTGCCC------------------CAACAACGACGACAACCACAACAACTTGTGCCCCA------------------------ACAAC---A---ACCACA---ACAACTTGTG---CACCAACAACAACGACAACCACAACGTCTSizeHit CountTotal NormTotal
No Reads
droKik1
ACTGCTACAACAACAACGTGTACTACCACGACCG---CTACAACAACAACG------TGCACTACCACGACCGCTACAAC------------------AACAACGTGCACTACCA---------------------------CGACCG------------------CTACAA-------------CAACAACGTGCACTACCACGACCGCTACAACAAC------------------------AAC------------------GTGCACTA------------------CCACGA---CCGCTACAACAACAACGTGCACTACA------------------------ACAACTTCT---AAAACA---ACAACGTGCA---CTACCACG---ACCGCTACAACAACAACCSizeHit CountTotal NormTotal
No Reads
droAna3
T--ACTACCACAACCACCTGTGAGCCTACTACAA---CAAGCACCACATCC------TGTGCGCC------TACTACCAC------------------AACCACCTGTGAGCCTA---------------------------CTACGA---------------------CAAGCA----------CCACATCCTGTGCGCC------TACTACCACAAC------------------------CAC------------------CTGTGAGC------------------CT---------ACTACCACAACAACCTGCGCGCCT------------------------------ACT---ACCACA---ACAACCTGTG---AGCCTACC---ACAACAACCACAACACCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................TACC---ACAACAACCACAACACCC2213.003030000
............................CTACAA---CAAGCACCACATCC------...................................................................................................................................................................................................................................................................................................................................................................2032.678071000
.....................GAGCCTACTACAA---CAAGCACCAC.............................................................................................................................................................................................................................................................................................................................................................................2322.505050000
....................................................................................................................................................................................................GCGCC------TACTACCACAAC------------------------CAC------------------C...................................................................................................................................................2192.00180180000
............................................................GCGCC------TACTACCAC------------------AACCACC...................................................................................................................................................................................................................................................................................................................2192.00180180000
.....................................................................................................................................................................................................................................................................................................................AACAACCTGCGCGCCT------------------------------ACT---ACCACA---AC........................................2712.002011000
...........AACCACCTGTGAGCCTACTACAA---C......................................................................................................................................................................................................................................................................................................................................................................................2421.503030000
............................CTACAA---CAAGCACCACATCC------TGT................................................................................................................................................................................................................................................................................................................................................................2331.334040000
............................CTACAA---CAAGCACCACATCC------T..................................................................................................................................................................................................................................................................................................................................................................2131.334040000
........................................................................................................................................................................................................................................................................................................................AACCTGCGCGCCT------------------------------ACT---ACCACA---AC........................................2411.001010000
.................................................................................................................................................................................................................................................................................................................CCACAACAACCTGCGCGCCT------------------------------ACT---ACCAC..............................................2811.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................C---ACAACAACCACAACACCC1911.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................CTACC---ACAACAACCACAACACCC2311.001010000
..............................................................................................................................................................................................................................................................................GC------------------CT---------ACTACCACAACAACCTGC.............................................................................................2211.001010000
.............................................................................................................................................................................................................................................................................................................ACTACCACAACAACCTGCGCGCCT------------------------------.........................................................2411.001010000
.......................GCCTACTACAA---CAAGCACCACATCC------T..................................................................................................................................................................................................................................................................................................................................................................2621.002020000
................................................................................................................................................................................................................................................................................................................ACCACAACAACCTGCGCGC.........................................................................................1911.001010000
...........AACCACCTGTGAGCCTACTACAA---CAAGC..................................................................................................................................................................................................................................................................................................................................................................................2821.002020000
.....................GAGCCTACTACAA---CAAGCACCA..............................................................................................................................................................................................................................................................................................................................................................................2221.002020000
....................................................................................................................................................................................................................................................................................................................................................................................AACCTGTG---AGCCTACC---ACAACAACCACAA.....2911.001010000
..............................................................................................................................................................................................................................................................................GC------------------CT---------ACTACCACAACAACCTGCGC...........................................................................................2411.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................G---AGCCTACC---ACAACAACCACAAC....2311.001010000
.......................GCCTACTACAA---CAAGCACCACATCC------...................................................................................................................................................................................................................................................................................................................................................................2521.002020000
..............................................................................................................................................CTACGA---------------------CAAGCA----------CCACATCC...........................................................................................................................................................................................................................2061.006060000
...............................................................................................................................................................................................................................................................................................................TACCACAACAACCTGCGCGC.........................................................................................2011.001001000
...................................................................................................................................................................................................................................................................................................................ACAACAACCTGCGCGCCT------------------------------AC.......................................................2011.001010000
...............................CAA---CAAGCACCACATCC------TGT................................................................................................................................................................................................................................................................................................................................................................2031.003030000
....................................................................................................................................................................................................................................................................................................................................................................................AACCTGTG---AGCCTACC---ACAACAACCA........2611.001010000
...................................................................................................................................................................................................................................................................................................................ACAACAACCTGCGCGCCT------------------------------ACT---ACCACA---AC........................................2911.001010000
.........................CTACTACAA---CAAGCACCACATCC------...................................................................................................................................................................................................................................................................................................................................................................2321.002020000
..............................................................................................................................................................................................................................................................................................................................................................................A---ACAACCTGTG---AGCCTACC---ACAACAAC..........2711.001010000
.......................................................................................................................................................................................................................................................................................................................CAACCTGCGCGCCT------------------------------ACT---ACCACA---AC........................................2511.001010000
.....................GAGCCTACTACAA---CAAGC..................................................................................................................................................................................................................................................................................................................................................................................1821.002020000
.....................................................................................................................................................................................................................................................................................................................AACAACCTGCGCGCCT------------------------------ACT---ACC................................................2211.001010000
..........................................................................................................................................................................................................................................................................................................................................................................CCACA---ACAACCTGTG---AGCCTAC......................2211.001010000
....................................................................................................................................................................................................GCGCC------TACTACCACAAC------------------------CAC------------------CTGT................................................................................................................................................2490.898080000
............................................................GCGCC------TACTACCAC------------------AACCACCTGT................................................................................................................................................................................................................................................................................................................2490.898080000
..................................................................................................AACCACCTGTGAGCCTA---------------------------CTAC..........................................................................................................................................................................................................................................................................2190.898080000
...........AACCACCTGTGAGCCTACTAC............................................................................................................................................................................................................................................................................................................................................................................................2190.898080000
........................................................................................................................................................................................................................AAC------------------------CAC------------------CTGTGAGC------------------CT---------ACTAC..........................................................................................................2190.898080000
............................................................................................................GAGCCTA---------------------------CTACGA---------------------CAAGCA----------CCAC...............................................................................................................................................................................................................................2360.835050000
.............................................................................................................AGCCTA---------------------------CTACGA---------------------CAAGCA----------CCACATCC...........................................................................................................................................................................................................................2660.674040000
..............................ACAA---CAAGCACCACATCC------TGT................................................................................................................................................................................................................................................................................................................................................................2130.672020000
................................AA---CAAGCACCACATCC------TGT................................................................................................................................................................................................................................................................................................................................................................1930.672020000
............................................................................................................................................................................................................................................................................................................................................................................ACA---ACAACCTGTG---AGCCC........................1830.672020000
.......................................................................................................................................................................................................................CAAC------------------------CAC------------------CTGTGAGC------------------CT---------ACTAC..........................................................................................................2290.565050000
...............................................................................C------------------AACCACCTGTGAGCCTA---------------------------CTAC..........................................................................................................................................................................................................................................................................2290.565050000
..........CAACCACCTGTGAGCCTACTAC............................................................................................................................................................................................................................................................................................................................................................................................2290.565050000
..........................................................................................................................................................................................................................................................................................................................................................................CCACA---ACAACCTGTG---AGCC.........................1920.501010000
.........................................................................................................TGTGAGCCTA---------------------------CTACGA---------------------CAAGC..............................................................................................................................................................................................................................................2160.503030000
.....................GAGCCTACTACAA---CAAGCACCACATCC------C..................................................................................................................................................................................................................................................................................................................................................................2820.501010000
.......................GCCTACTACAA---CAAGCACCACATC..........................................................................................................................................................................................................................................................................................................................................................................2420.501010000
..................TGTGAGCCTACTACAA---CAAGCACCAC.............................................................................................................................................................................................................................................................................................................................................................................2620.501010000
...........AACCACCTGTGAGCCTACTACAA---CA.....................................................................................................................................................................................................................................................................................................................................................................................2520.501010000
..............CACCTGTGAGCCTACTACAA---CA.....................................................................................................................................................................................................................................................................................................................................................................................2220.501010000
......................AGCCTACTACAA---CAAGCACCA..............................................................................................................................................................................................................................................................................................................................................................................2120.501010000
...................................................................................................................................................................................................................................................................................................................................................................ACT---ACCACA---ACAACCTGTG---.............................1920.501010000
...............ACCTGTGAGCCTACTACAA---CAAGC..................................................................................................................................................................................................................................................................................................................................................................................2420.501010000
......................AGCCTACTACAA---CAAGCACCACATCC------...................................................................................................................................................................................................................................................................................................................................................................2620.501010000
......................AGCCTACTACAA---CAAGCACCAC.............................................................................................................................................................................................................................................................................................................................................................................2220.501010000
............................................................................................................GAGCCTA---------------------------CTACGA---------------------CAAGCA----------CCACATCC...........................................................................................................................................................................................................................2760.503030000
.............CCACCTGTGAGCCTACTACAA---CAA....................................................................................................................................................................................................................................................................................................................................................................................2420.501010000
.........................CTACTACAA---CAAGCACCACATC..........................................................................................................................................................................................................................................................................................................................................................................2220.501010000
..................TGTGAGCCTACTACAA---CAAGC..................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
................................................................................................................CTA---------------------------CTACGA---------------------CAAGCA----------CCAC...............................................................................................................................................................................................................................1960.503030000
................................................................................................................CTA---------------------------CTACGA---------------------CAAGCA----------CCACATCC...........................................................................................................................................................................................................................2360.503030000
..................TGTGAGCCTACTACAA---CAAGCACCACATC..........................................................................................................................................................................................................................................................................................................................................................................2920.501010000
.........................CTACTACAA---CAAGCACCAC.............................................................................................................................................................................................................................................................................................................................................................................1920.501010000
...........................................................................................................................................................................................................................................................................................................................................................................CACA---ACAACCTGTG---AGCC.........................1820.501010000
...........................ACTACAA---CAAGCACCACATCC------TGTGC..............................................................................................................................................................................................................................................................................................................................................................2620.501010000
...............ACCTGTGAGCCTACTACAA---CA.....................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
.........................CTACTACAA---CAAGCACCACATCC------T..................................................................................................................................................................................................................................................................................................................................................................2420.501010000
..................TGTGAGCCTACTACAA---CA.....................................................................................................................................................................................................................................................................................................................................................................................1820.501010000
..............................................................................................................................................................................................................................................................................GC------------------CT---------ACTACCACAACAACCT...............................................................................................2020.501010000
...................GTGAGCCTACTACAA---CAAGCACC...............................................................................................................................................................................................................................................................................................................................................................................2320.501010000
..............CACCTGTGAGCCTACTACAA---CAAGC..................................................................................................................................................................................................................................................................................................................................................................................2520.501010000
.....................GAGCCTACTACAA---CAAGCAC................................................................................................................................................................................................................................................................................................................................................................................2020.501010000
..................................................................................................AACCACCTGTGAGCCTA---------------------------CTACGA---------------------C..................................................................................................................................................................................................................................................2460.503030000
................................................................................................................CTA---------------------------CTACGA---------------------CAAGCA----------CCACATCCTGT........................................................................................................................................................................................................................2660.503030000
..........CAACCACCTGTGAGCCTACTACAA---.......................................................................................................................................................................................................................................................................................................................................................................................2420.501010000
......................AGCCTACTACAA---CAAGCACCACATCC------TGT................................................................................................................................................................................................................................................................................................................................................................2920.501010000
...................GTGAGCCTACTACAA---CAAGCAC................................................................................................................................................................................................................................................................................................................................................................................2220.501010000
....................TGAGCCTACTACAA---CAAGC..................................................................................................................................................................................................................................................................................................................................................................................1920.501010000
..............CACCTGTGAGCCTACTACAA---CAAG...................................................................................................................................................................................................................................................................................................................................................................................2420.501010000
..................TGTGAGCCTACTACAA---CAA....................................................................................................................................................................................................................................................................................................................................................................................1920.501010000
.................................................................................................................................................................................................................................................................................................................................GCCT------------------------------ACT---ACCACA---ACAACCT...................................2020.501010000
............................................................................................................................................................................................CATCCTGTGCGCC------TACTACCAC....................................................................................................................................................................................................2290.444040000
..............................................CATCC------TGTGCGCC------TACTACCAC------------------..........................................................................................................................................................................................................................................................................................................................2290.444040000
................................................................C------TACTACCAC------------------AACCACCTGT................................................................................................................................................................................................................................................................................................................2090.444022000
..........................................................GTGCGCC------TACTACCAC------------------AACCACC...................................................................................................................................................................................................................................................................................................................2390.444040000
................................................................C------TACTACCAC------------------AACCACCTGTGAGC............................................................................................................................................................................................................................................................................................................2490.444040000
.................................................................................................................................................................................................................CTACCACAAC------------------------CAC------------------CTGTGAGC------------------..........................................................................................................................2190.444040000
..................................................................................................................................................................................................GTGCGCC------TACTACCACAAC------------------------CAC------------------C...................................................................................................................................................2390.444040000
.........................................................................CTACCAC------------------AACCACCTGTGAGC............................................................................................................................................................................................................................................................................................................2190.444040000
........................................................................................................................................................................................................C------TACTACCACAAC------------------------CAC------------------CTGT................................................................................................................................................2090.444022000
....CTACCACAACCACCTGTGAGC...................................................................................................................................................................................................................................................................................................................................................................................................2190.444040000
........................................................................................................................................................................................................C------TACTACCACAAC------------------------CAC------------------CTGTGAGC------------------..........................................................................................................................2490.444040000
............................CTACAA---CAAGCACCACATC..........................................................................................................................................................................................................................................................................................................................................................................1930.331010000
.............................................................CGCC------TACTACCAC------------------AACCACC...................................................................................................................................................................................................................................................................................................................2090.333030000
...............................................................................C------------------AACCACCTGTGAGCCTA---------------------------CTACG.........................................................................................................................................................................................................................................................................2360.332011000
.....................................................................................................................................................................................................CGCC------TACTACCACAAC------------------------CAC------------------CTGT................................................................................................................................................2390.333030000
..............................................................................................................................................CTACGA---------------------CAAGCA----------CCACATC............................................................................................................................................................................................................................1960.332020000
..............................................CATCC------TGTGCGCC------TACTACCAC------------------AACCACC...................................................................................................................................................................................................................................................................................................................2990.333030000
............................................................................................................GAGCCTA---------------------------CTACGA---------------------CAAGCA----------CCA................................................................................................................................................................................................................................2260.332020000
..................................................................................................................A---------------------------CTACGA---------------------CAAGCA----------CCACATC............................................................................................................................................................................................................................2060.332020000
..................................................................................................AACCACCTGTGAGCCTA---------------------------CTACGA---------------------CAAG...............................................................................................................................................................................................................................................2760.332020000
..............................................................................................................................................CTACGA---------------------CAAGCA----------CCACATCCTGTGCGC....................................................................................................................................................................................................................2760.332020000
.....................................................................................................................................................................................................CGCC------TACTACCACAAC------------------------CAC------------------C...................................................................................................................................................2090.333030000
...............................CAA---CAAGCACCACATCC------TGTGC..............................................................................................................................................................................................................................................................................................................................................................2230.331010000
...........................................CCACATCC------TGTGCGCC------TACTACCAC------------------..........................................................................................................................................................................................................................................................................................................................2590.333030000
................................AA---CAAGCACCACATCC------TGC................................................................................................................................................................................................................................................................................................................................................................1930.331010000
.....................................................................................................CACCTGTGAGCCTA---------------------------CTACGA---------------------CAAGC..............................................................................................................................................................................................................................................2560.332020000
............................CTACAA---CAAGCACCACATCC------TGTGC..............................................................................................................................................................................................................................................................................................................................................................2530.331010000
.................................................................................................................................................................................................................CTACCACAAC------------------------CAC------------------CTGTGAGC------------------C.........................................................................................................................2290.333030000
.................................................................................................................................................CGA---------------------CAAGCA----------CCACATCCTGT........................................................................................................................................................................................................................2060.332020000
..........................................................................................................GTGAGCCTA---------------------------CTACGA---------------------CAAGCA----------C..................................................................................................................................................................................................................................2260.332020000
...............................CAA---CAAGCACCACATCC------TGTGCGCC------T....................................................................................................................................................................................................................................................................................................................................................2630.331010000
.......................................................................................................................................................................................................................CAAC------------------------CAC------------------CTGTGAGC------------------CT---------ACT............................................................................................................2090.333030000
.............................................................CGCC------TACTACCAC------------------AACCACCTGT................................................................................................................................................................................................................................................................................................................2390.333030000
..............................................................................................................................................CTACGA---------------------CAAGCA----------CCACATCCTGT........................................................................................................................................................................................................................2360.332020000
................................AA---CAAGCACCACATCC------TGTGCGCC------TAC..................................................................................................................................................................................................................................................................................................................................................2730.331010000
..................................................................................................AACCACCTGTGAGCCTA---------------------------CTACGA---------------------CAA................................................................................................................................................................................................................................................2660.332020000
.................................................................................................................................................CGA---------------------CAAGCA----------CCACATCCTGTG.......................................................................................................................................................................................................................2160.332011000
.........................................................................................................TGTGAGCCTA---------------------------CTACGA---------------------CAAGCA----------C..................................................................................................................................................................................................................................2360.332020000
.........................................................................................................................................................................................CCACATCCTGTGCGCC------TACTACCAC....................................................................................................................................................................................................2590.333030000
............................................................................................................................................................................................CATCCTGTGCGCC------TACTACCACAAC------------------------CAC------------------C...................................................................................................................................................2990.333030000
....CTACCACAACCACCTGTGAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2290.333030000
...............................................................................C------------------AACCACCTGTGAGCCTA---------------------------CT............................................................................................................................................................................................................................................................................2090.333030000
..................................................................................................................................................GA---------------------CAAGCA----------CCACATCCTGT........................................................................................................................................................................................................................1960.332020000
................................................................C------TACTACCAC------------------AACCACCTGTG...............................................................................................................................................................................................................................................................................................................2190.333030000
.............................TACAA---CAAGCACCACATCC------TGTG...............................................................................................................................................................................................................................................................................................................................................................2330.331010000
..................................................................................................................A---------------------------CTACGA---------------------CAAGCA----------CCACATCCTGC........................................................................................................................................................................................................................2460.332020000
.....................................................................................................CACCTGTGAGCCTA---------------------------CTACGA---------------------CA.................................................................................................................................................................................................................................................2260.332020000
..........CAACCACCTGTGAGCCTACT..............................................................................................................................................................................................................................................................................................................................................................................................2090.333030000
........................................................................................................................................................................................................C------TACTACCACAAC------------------------CAC------------------CTGTG...............................................................................................................................................2190.333030000
...........................................................................................................TGAGCCTA---------------------------CTACGA---------------------CAAGCA----------CCAC...............................................................................................................................................................................................................................2460.332011000
................................................................................................................................................ACGA---------------------CAAGCA----------CCACATCCTGT........................................................................................................................................................................................................................2160.332020000
............................CTACAA---CAAGCACCACATCC------TGC................................................................................................................................................................................................................................................................................................................................................................2330.331010000
.........................................................................CTACCAC------------------AACCACCTGTGAGCC...........................................................................................................................................................................................................................................................................................................2290.333030000
...............................CAA---CAAGCACCACATCC------T..................................................................................................................................................................................................................................................................................................................................................................1830.331010000
..............................................................................................................GCCTA---------------------------CTACGA---------------------CAAGCA----------CCACATCCT..........................................................................................................................................................................................................................2660.332020000
..............................ACAA---CAAGCACCACATCC------C..................................................................................................................................................................................................................................................................................................................................................................1930.331010000
.........................................................TGTGCGCC------TACTACCAC------------------AACCACCTGT................................................................................................................................................................................................................................................................................................................2790.222020000
...........................................CCACATCC------TGTGCGCC------TACTACC..............................................................................................................................................................................................................................................................................................................................................2390.222020000
.................................................CC------TGTGCGCC------TACTACCAC------------------..........................................................................................................................................................................................................................................................................................................................1990.222011000
........CACAACCACCTGTGAGCCTACTAC............................................................................................................................................................................................................................................................................................................................................................................................2490.222020000
.................................................................................................................................................................................................TGTGCGCC------TACTACCACAAC------------------------CAC------------------C...................................................................................................................................................2490.222020000
.............................................................................CAC------------------AACCACCTGTGAGCC...........................................................................................................................................................................................................................................................................................................1890.222020000
........CACAACCACCTGTGAGCC..................................................................................................................................................................................................................................................................................................................................................................................................1890.222020000
............................................................GCGCC------TACTACCAC------------------AACCACCT..................................................................................................................................................................................................................................................................................................................2290.222020000
..........................................ACCACATCC------TGTGCGCC------TACTACCAC------------------..........................................................................................................................................................................................................................................................................................................................2690.222020000
....................................................................................................................................................................................................GCGCC------TACTACCACAAC------------------------CAC------------------CT..................................................................................................................................................2290.222020000
..................................................................................................................................................................................................................TACCACAAC------------------------CAC------------------CTGTGAGC------------------C.........................................................................................................................2190.222020000
.............................................................................CAC------------------AACCACCTGTGAGCCTA---------------------------CTAC..........................................................................................................................................................................................................................................................................2490.222020000
.............................................................................................................................................................................................ATCCTGTGCGCC------TACTACCA.....................................................................................................................................................................................................2090.222020000
..........................................................................................................................................................................................CACATCCTGTGCGCC------TACTACCAC....................................................................................................................................................................................................2490.222020000
.............................................................CGCC------TACTACCAC------------------AACCACCTGTGAGC............................................................................................................................................................................................................................................................................................................2790.222020000
.....................................................................................................................................................................................................CGCC------TACTACCACAAC------------------------CAC------------------CC..................................................................................................................................................2190.222020000
.............................................................................................................................................................................................ATCCTGTGCGCC------TACTACC......................................................................................................................................................................................................1990.222020000
.............................................................CGCC------TACTACCAC------------------AACCACCC..................................................................................................................................................................................................................................................................................................................2190.222020000
.........................................................TGTGCGCC------TACTACCAC------------------AACCACC...................................................................................................................................................................................................................................................................................................................2490.222020000
...............................................ATCC------TGTGCGCC------TACTACCA.............................................................................................................................................................................................................................................................................................................................................2090.222020000
.............................................................................................................................................................................................ATCCTGTGCGCC------TACTACCAC....................................................................................................................................................................................................2190.222020000
.........................................CACCACATCC------TGTGCGCC------TACTACC..............................................................................................................................................................................................................................................................................................................................................2590.222020000
.........................................................................................................................................................................................CCACATCCTGTGCGCC------TACTACC......................................................................................................................................................................................................2390.222020000
.....................................................................................................................................................................................................CGCC------TACTACCACAAC------------------------CAC------------------CTGTGAGC------------------..........................................................................................................................2790.222020000
.....................................................................................................................................................................................................................CACAAC------------------------CAC------------------CTGTGAGC------------------C.........................................................................................................................1890.222020000
...............................................ATCC------TGTGCGCC------TACTACCAC------------------..........................................................................................................................................................................................................................................................................................................................2190.222020000
...............................................ATCC------TGTGCGCC------TACTACCAC------------------AACCACC...................................................................................................................................................................................................................................................................................................................2890.222011000
..........................................................................TACCAC------------------AACCACCTGTGAGCC...........................................................................................................................................................................................................................................................................................................2190.222020000
.................................................................................................................................................................................................TGTGCGCC------TACTACCACAAC------------------------CAC------------------CTGT................................................................................................................................................2790.222020000
...............................................................................................................................................................................................CCTGTGCGCC------TACTACCAC....................................................................................................................................................................................................1990.222011000
..............................................................................................................................................................................A----------CCACATCCTGTGCGCC------TACTACCAC....................................................................................................................................................................................................2690.222020000
...............................................ATCC------TGTGCGCC------TACTACC..............................................................................................................................................................................................................................................................................................................................................1990.222020000
............................................CACATCC------TGTGCGCC------TACTACCAC------------------..........................................................................................................................................................................................................................................................................................................................2490.222020000
.............................................................................................................................................................................................ATCCTGTGCGCC------TACTACCACAAC------------------------CAC------------------C...................................................................................................................................................2890.222011000
.....TACCACAACCACCTGTGAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2190.222020000
.....................................................................................................................................................................................................................CACAAC------------------------CAC------------------CTGTGAGC------------------CT---------ACTAC..........................................................................................................2490.222020000
.............................................................................................................................................................................CA----------CCACATCCTGTGCGCC------TACTACC......................................................................................................................................................................................................2590.222020000
...........AACCACCTGTGAGCCTACC..............................................................................................................................................................................................................................................................................................................................................................................................19100.202020000
..................................................................................................AACCACCTGTGAGCCTA---------------------------CC............................................................................................................................................................................................................................................................................19100.202020000
........................................................................................................................................................................................................................AAC------------------------CAC------------------CTGTGAGC------------------CT---------ACC............................................................................................................19100.202020000
.....................................................................................................CACCTGTGAGCCTA---------------------------CTACGA---------------------...................................................................................................................................................................................................................................................2060.171010000
...............................................................................................................................................TACGA---------------------CAAGCA----------CCACATCCTGT........................................................................................................................................................................................................................2260.171001000
................................................................................................................CTA---------------------------CTACGA---------------------CAAGCA----------CCACATCCT..........................................................................................................................................................................................................................2460.171010000
................................................................................................................................................ACGA---------------------CAAGCA----------CCACATCCTGTG.......................................................................................................................................................................................................................2260.171010000
.............................................................................................................AGCCTA---------------------------CTACGA---------------------CAAGCA----------CCA................................................................................................................................................................................................................................2160.171010000
..................................................................................................................................................GA---------------------CAAGCA----------CCACATCCTGTGCGCC------C............................................................................................................................................................................................................2560.171010000
................................................................................................................CTA---------------------------CTACGA---------------------CAAGCA----------CCACATCCTGTGC......................................................................................................................................................................................................................2860.171010000
..........................................................................................................GTGAGCCTA---------------------------CTACGA---------------------CAAGCA----------CC.................................................................................................................................................................................................................................2360.171010000
..........................................................................................................GTGAGCCTA---------------------------CTACGA---------------------CAA................................................................................................................................................................................................................................................1860.171001000
...............................................................................................................................................TACGA---------------------CAAGCA----------CCACATCCT..........................................................................................................................................................................................................................2060.171010000
..............................................................................................................GCCTA---------------------------CTACGA---------------------CAAGCA----------CCA................................................................................................................................................................................................................................2060.171010000
.............................................................................................................AGCCTA---------------------------CTACGA---------------------CAAGCA----------CCAC...............................................................................................................................................................................................................................2260.171010000
.............................................................................CAC------------------AACCACCTGTGAGCCTA---------------------------CTACGA---------------------C..................................................................................................................................................................................................................................................2760.171010000
..........................................................................................................GTGAGCCTA---------------------------CTACGA---------------------CAAGCA----------CCAC...............................................................................................................................................................................................................................2560.171010000
......................................................................................................ACCTGTGAGCCTA---------------------------CTACGA---------------------C..................................................................................................................................................................................................................................................2060.171010000
..............................................................................................................GCCTA---------------------------CTACGA---------------------CAAGCA----------C..................................................................................................................................................................................................................................1860.171010000
..............................................................................................................GCCTA---------------------------CTACGA---------------------CAAGCA----------CCACATCCTGT........................................................................................................................................................................................................................2860.171010000
..................................................................................................................A---------------------------CTACGA---------------------CAAGCA----------CCACATCCC..........................................................................................................................................................................................................................2260.171010000
................................................................................................................CTA---------------------------CTACGA---------------------CAAGCA----------CCACATCCTGTG.......................................................................................................................................................................................................................2760.171010000
................................................................................................................CTA---------------------------CTACGA---------------------CAAGCA----------CCACATCA...........................................................................................................................................................................................................................2360.171010000
................................................................................................................................................ACGA---------------------CAAGCA----------CCACATCCTGTGCGC....................................................................................................................................................................................................................2560.171010000
.................................................................................................................................................CGA---------------------CAAGCA----------CCACATCCTGC........................................................................................................................................................................................................................2060.171010000
..................................................................................................................A---------------------------CTACGA---------------------CAAGCA----------CCACATCCTGTGCGCC------.............................................................................................................................................................................................................2960.171010000
............................................................................................................GAGCCTA---------------------------CTACGA---------------------CAAGCA----------CCACATC............................................................................................................................................................................................................................2660.171010000
...............................................................................................................................................TACGA---------------------CAAGCA----------CCACATCC...........................................................................................................................................................................................................................1960.171010000
..................................................................................................................................................GA---------------------CAAGCA----------CCACATCCTGTGC......................................................................................................................................................................................................................2160.171010000
..................................................................................................................A---------------------------CTACGA---------------------CAAGCA----------CCACATCC...........................................................................................................................................................................................................................2160.171010000
..................................................................................................................................................GA---------------------CAAGCA----------CCACATCCTGTGCGCC------.............................................................................................................................................................................................................2460.171010000
.........................................................................................................TGTGAGCCTA---------------------------CTACGA---------------------CAAGCA----------CCA................................................................................................................................................................................................................................2560.171010000
..................................................................................................AACCACCTGTGAGCCTA---------------------------CTACGA---------------------...................................................................................................................................................................................................................................................2360.171010000
..............................................................................................................GCCTA---------------------------CTACGA---------------------CAAGCA----------CCAC...............................................................................................................................................................................................................................2160.171010000
................................................................................................................CTA---------------------------CTACGA---------------------CAAGCA----------CCACATCCTGC........................................................................................................................................................................................................................2660.171010000
........................................................................................................CTGTGAGCCTA---------------------------CTACGA---------------------CAAGCA----------CCA................................................................................................................................................................................................................................2660.171010000
...........................................................................................................TGAGCCTA---------------------------CTACGA---------------------CAAGCA----------CCACATCC...........................................................................................................................................................................................................................2860.171010000
...................................................................................................ACCACCTGTGAGCCTA---------------------------CTACGA---------------------C..................................................................................................................................................................................................................................................2360.171010000
................................................................................................................................................ACGA---------------------CAAGCA----------CCACATCCT..........................................................................................................................................................................................................................1960.171010000
............................................................................................................GAGCCTA---------------------------CTACGA---------------------CAAGCA----------C..................................................................................................................................................................................................................................2060.171010000
................................................................................................................CTA---------------------------CTACGA---------------------CAAGCA----------CCACATC............................................................................................................................................................................................................................2260.171010000
..................................................................................................................................................GA---------------------CAAGCA----------CCACATCCTGTGCGC....................................................................................................................................................................................................................2360.171010000
..............................................................................................................GCCTA---------------------------CTACGA---------------------CAAGCA----------CCACATCC...........................................................................................................................................................................................................................2560.171010000
.............................................................................................................AGCCTA---------------------------CTACGA---------------------CAAGCA----------CC.................................................................................................................................................................................................................................2060.171010000
...............................................................................C------------------AACCACCTGTGAGCCTA---------------------------CTACGA---------------------CAAG...............................................................................................................................................................................................................................................2860.171010000
................................................................................................................CTA---------------------------CTACGA---------------------CAAGCA----------CCACATCCC..........................................................................................................................................................................................................................2460.171010000
...................................................................................................ACCACCTGTGAGCCTA---------------------------CTACGA---------------------CAA................................................................................................................................................................................................................................................2560.171010000
...............................................................................C------------------AACCACCTGTGAGCCTA---------------------------CTACGA---------------------CAA................................................................................................................................................................................................................................................2760.171010000
..............................................................................AC------------------AACCACCTGTGAGCCTA---------------------------CTACGA---------------------CA.................................................................................................................................................................................................................................................2760.171010000
...............................................................................................................................................TACGA---------------------CAAGCA----------CCACATCCTGTGCGC....................................................................................................................................................................................................................2660.171010000
..........................................................................................................................................................................................CACATCCTGTGCGCC------TACTACCA.....................................................................................................................................................................................................2390.111010000
..........CAACCACCTGTGAGCCTA................................................................................................................................................................................................................................................................................................................................................................................................1890.111010000
................................................................................................................................................................................................................ACTACCACAAC------------------------CAC------------------CTGTGA..............................................................................................................................................2090.111010000
.........ACAACCACCTGTGAGCCTA................................................................................................................................................................................................................................................................................................................................................................................................1990.111010000
...........................................................................................................................................................................................ACATCCTGTGCGCC------TACTAC.......................................................................................................................................................................................................2090.111010000
........CACAACCACCTGTGAGCCTACT..............................................................................................................................................................................................................................................................................................................................................................................................2290.111010000
..........................................................................TACCAC------------------AACCACCTGTGAGC............................................................................................................................................................................................................................................................................................................2090.111010000
droBip1
ACCACCACGACAACACCTTGTGCTCCGACAACGA---CTTCCACAACAACT------ACAACAACCACTACAACAACTAC------------------AACACCTTGTGCCCCTACAACGACTTCCA---------------CCACAA------------------CGACAA-------------CGACAACCACTACCAC------GACCACCACAAC------------------------AAC------------------TACTACAA------------------CAACCACCACCACAACTACAACACCTTGTGCCCCT------------------------ACAACGACT---TCCACT---ACAACGACAA---CCACAACA---ACAACAACTACAACAACCSizeHit CountTotal NormTotal
No Reads
dp5
ACGACAACTACAACTACTTGCTCGACAACAACAA---CCACGACGACAACC------ACTACAACAACAACCACGACTAC------------------AAC---------------------------------------------AA------------------CCACGA-------------CTACAACCACCACTACTACAACCACCACTACTAC---------------------------------------------AACCACAC------------------CAACAA---CGACAACTACAACTACTTGCTCGACA------------------------ACAACAACC---ACGACG---ACAACCACTA---CAACAACA---ACCACGACTACAACAACCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................TGCTCGACA------------------------ACAACAACC---ACGACG---AC........................................2660.1710000000001
...................................................................................................................................................................................................................................................................................................................................CA------------------------ACAACAACC---ACGACG---AC........................................1960.1710000000001
.........................CAACAACAA---CCACGACGAC.............................................................................................................................................................................................................................................................................................................................................................................1960.1710000000001
..................TGCTCGACAACAACAA---CCACGACGAC.............................................................................................................................................................................................................................................................................................................................................................................2660.1710000000001
droPer2
ACCACGACAACAACAACCACTACAACTACAACCA---CGACAACAACAACC---------ACGACAACAACCACTACTAC------------------AACGACTTGCTCGCCAT---------------------------CAACTA------------------CCACAA-------------CAACCACGACCACTACG---ACAACCACCACGAC------------------------AAC------------------CACAACTA------------------CGACAA---CAACAACGACGACAACCACCACTACT------------------------ACAACCACC---ACTACG---ACAACCACCA---C------T---ACTACAACCACAACAAC-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ACAACAACCACAACAACGACAACTAC---GACGA---CGACAACAACAACC------TGTAAACCAACAATAACAAGTAC----------------------------ACTACGA---------------------------CAACAA------------------CTACAA-------------CTACAACTACAACTACGACAACGACGACCACAAC------------------------AAC------------------ATGCAAACCAACGACAACGACATCAACAACTACTACAACTACAACTACAACCACAGCAAC------------------------------GACG---ACCACA---ACAACTTGCG---AACCAACA---CCAACGACAACAACAACTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........CAACAACGACAACTAC---GACCT---.......................................................................................................................................................................................................................................................................................................................................................................................21180.06101000
droVir3
ACCACCACTACAACAACCACTACTACAACAACCA---CTACTACAACAACCACAACCTGCACCAC------ACCCACAACAACCACTTGCACCACAACAACAACCACTACTACAA---------------------------CAACAA---------------------CCA-------------CTACAACAACCACTACTACAACAACGACAAC------------------------------------------------TACTACAA------------------CAACCACCACAACTACAACAACAACCTGCACCACA------------------------CCCACA---------ACA---ACCACTTGCACCACAACAACA---ACCACCACGACAACAACCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................CACCACAACAACA---ACCACCA...........2020.501001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................CAACAA---------------------CCA-------------CTACAACAAC.........................................................................................................................................................................................................................1980.131001000000000000000000000000000000000000000000000000000000000000
droMoj3
T--ACCACAACTACAACCTGTACCACGACAACCA---CCACAACTACAACC------TGTACCACGACAACCACCACCAC------------------TACAACCTGTACCACGA---------------------------CAACCA------------------CCACAA-------------CTACAACCTGTACTACGACAACCACCACCACGAC------------------------AAC------------------TTGCACCA------------------CGACAA---CAACAAAAACAACAACTTGCACCACA------------------------ACAACAACA---AAAACG---ACAACTTGCA---CCACAACA---ACAACAAAAACAACAACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ACAACCACAAC---AACCACAACAACCACAACAA---CTACAACAACAACT------TGCAAACCGACAACAACCACTAC------------------GACTACCACCACAACAA---------------------------CTACAA------------------CCACAA-------------CAACAACCACTACGAC------AACGACCACAAC------------------------AACTACAACCACAACAACAACTTGCAAAC------------------CGACAA------CAACCACTACGACTACCACCACA------------------------ACAACAACCACTACGACA---ACGACCACTA---CGACAACG---ACTACCACCACAACAAC-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................AACAACCACAACAA---CTACA..................................................................................................................................................................................................................................................................................................................................................................................1980.13110

Generated: 05/17/2015 at 10:11 PM