ID:

dya_249

 Coordinate:

2L:6759734-6759884 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.7 -5.7

Flybase annnotation

exon [dyak_GLEANR_1388:2]; CDS [Dyak\GE13692-cds]; intron [Dyak\GE13692-in]

No Repeatable elements found

mature
  1. 2L:6759417-6759442 -
  2. dya_249  2L:6759800-6759825 -
star
  1. 2L:6758441-6758461 -
  2. 2L:6758651-6758671 -
  3. 2L:6759380-6759400 -
  4. 2L:6759440-6759460 -
  5. dya_249  2L:6759763-6759783 -
  6. dya_249  2L:6759823-6759843 -
  7. 2L:6760273-6760293 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AATTACAACCACAACAACCTGTGCTCCAGTAATTACAACCACAACAACCTGTGCACCAGAAATTACAACTACAACAACCCGTGCACCTGAAGTTACGACCACAACAACCTGTGCACCAGAAATTACTACTACAACAACCCGTGCACCTGAAGTTACGACCACAACAACCTGTGTTCCCGAAATTACAACCACAACAACCTGTGCTCCCGAAATTACAACCACAACAACCTGTGCTCCCGAAATTACAACCA
*************************************************************************************************************.((((((........................))))))..........................******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M056
embryo
 M043
female body
 V046
embryo
 V052
head
 V058
head
.............................................................................................................TGTGCACCAGAAATTACTACTACAAC.................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0
.............................................................................................TACGACCACAACAACCTGTGCACC...................................................................................................................................... 24 0 4 0.25 1 1 0 0 0 0
.............................................................................................TACGACCACAACAACCTGTGCACCAGA................................................................................................................................... 27 0 4 0.25 1 0 1 0 0 0
................................................................................................GACCACAACAACCTGTGCACCAG.................................................................................................................................... 23 0 4 0.25 1 0 1 0 0 0
...TACAACCACAACAACCTGTGCTCCAGT............................................................................................................................................................................................................................. 27 0 10 0.20 2 1 0 1 0 0
...........CAACAACCTGTGCTCCAGT............................................................................................................................................................................................................................. 19 0 10 0.20 2 1 0 1 0 0
........................TCCAGTAATTACAACCACAACAACCTG........................................................................................................................................................................................................ 27 0 12 0.17 2 0 2 0 0 0
...................TGTGCTCCAGTAATTACAACCACAAC.............................................................................................................................................................................................................. 26 0 12 0.17 2 0 2 0 0 0
...........................................................................................GTTACGACCACAACAACCTGC........................................................................................................................................... 21 1 7 0.14 1 1 0 0 0 0
......................................................................................................................................................AGTTACGACCACAACAACCTGC............................................................................... 22 1 7 0.14 1 1 0 0 0 0
.......................................................................................................................................................GTTACGACCACAACAACCTGT............................................................................... 21 0 7 0.14 1 1 0 0 0 0
....................................................................................................................................................GAAGTTACGACCACAACAACC.................................................................................. 21 0 7 0.14 1 1 0 0 0 0
..........................................................................................AGTTACGACCACAACAACCTGT........................................................................................................................................... 22 0 7 0.14 1 1 0 0 0 0
.................................................................CAACTACAACAACCCGTGC....................................................................................................................................................................... 19 0 7 0.14 1 1 0 0 0 0
........................................................................................GAAGTTACGACCACAACAACC.............................................................................................................................................. 21 0 7 0.14 1 1 0 0 0 0
..........................................................................................AGTTACGACCACAACAACCTGC........................................................................................................................................... 22 1 7 0.14 1 1 0 0 0 0
.......................................................................................................................................................GTTACGACCACAACAACCTGC............................................................................... 21 1 7 0.14 1 1 0 0 0 0
......................................................................................................................................................AGTTACGACCACAACAACCTGT............................................................................... 22 0 7 0.14 1 1 0 0 0 0
...........................................................................................GTTACGACCACAACAACCTGT........................................................................................................................................... 21 0 7 0.14 1 1 0 0 0 0
....................................AACCACAACAACCTGTGCACCAGAAAT............................................................................................................................................................................................ 27 0 9 0.11 1 0 1 0 0 0
...........CAACAACATGTGCTCCAGTAATTACAACC................................................................................................................................................................................................................... 29 1 10 0.10 1 1 0 0 0 0
.........CACAACAACCTGTGCTCCAGT............................................................................................................................................................................................................................. 21 0 10 0.10 1 1 0 0 0 0
...........CAACAACCTGTGCTCCAGTAATTACAAC.................................................................................................................................................................................................................... 28 0 10 0.10 1 1 0 0 0 0
....ACAACCACAACAACCTGTGCTCCAGT............................................................................................................................................................................................................................. 26 0 10 0.10 1 0 1 0 0 0
............AACAACCTGTGCTCCAGTA............................................................................................................................................................................................................................ 19 0 10 0.10 1 1 0 0 0 0
.........CACAACAACCTGTGCTCCAGTAATTAC....................................................................................................................................................................................................................... 27 0 10 0.10 1 1 0 0 0 0
.......ACCACAACAACCTGTGCTCCAGTA............................................................................................................................................................................................................................ 24 0 10 0.10 1 0 1 0 0 0
...............................................................................................................................................................................................CAACAACCTGTGCTCCCGAAAT...................................... 22 0 20 0.10 2 2 0 0 0 0
...............................ATTACAACCACAACAACCTGTGCACC.................................................................................................................................................................................................. 26 0 10 0.10 1 0 1 0 0 0
........CCACAACAACCTGTGCTCCAGT............................................................................................................................................................................................................................. 22 0 10 0.10 1 1 0 0 0 0
............AACAACCTGTGCTCCAGTAATTACAAC.................................................................................................................................................................................................................... 27 0 10 0.10 1 1 0 0 0 0
.............................................................................................................................................................................................................................CAACAACCTGTGCTCCCGAAAT........ 22 0 20 0.10 2 2 0 0 0 0
..................................ACAACCACAACAACCTGTGCAC................................................................................................................................................................................................... 22 0 12 0.08 1 1 0 0 0 0
....................................AACCACAACAACCTGTGCACCA................................................................................................................................................................................................. 22 0 12 0.08 1 0 1 0 0 0
......................GCTCCAGTAATTACAACCACAACAACC.......................................................................................................................................................................................................... 27 0 12 0.08 1 1 0 0 0 0
...................................CAACCACTACAACCTGTGCACCAA................................................................................................................................................................................................ 24 2 12 0.08 1 0 0 0 0 1
.......ACCACAACAACCTGTGCTCCA............................................................................................................................................................................................................................... 21 0 14 0.07 1 0 1 0 0 0
...TACAACCACAACAACCTGTGCTCCAGC............................................................................................................................................................................................................................. 27 1 14 0.07 1 1 0 0 0 0
.......................................................................................................................................................................................TACAACCACAACAACCTGTGCTCCC........................................... 25 0 17 0.06 1 0 1 0 0 0
.....................................................................................................................................................................................................................TACAACCACAACAACCTGTGCTCCC............. 25 0 17 0.06 1 0 1 0 0 0
..........................................................................................................................................................................................AACCACAACAACCTGTGCTCCCGAAAT...................................... 27 0 17 0.06 1 0 1 0 0 0
........................................................................................................................................................................................................................AACCACAACAACCTGTGCTCCCGAAAT........ 27 0 17 0.06 1 0 1 0 0 0
..........................GATCAATTACAACCACAACAACCTGT....................................................................................................................................................................................................... 26 3 18 0.06 1 1 0 0 0 0
.............................................................................................................................................................................................CACAACAACCTGTGCTCCCGA......................................... 21 0 18 0.06 1 1 0 0 0 0
.............................................................................................................................................................................................CACAACAACCTGTGCTCCCGAAA....................................... 23 0 18 0.06 1 1 0 0 0 0
...........................................................................................................................................................................................ACCACAACAACCTGTGCTCCCGA......................................... 23 0 18 0.06 1 0 1 0 0 0
............................................................................................................................................................................................CCACAACAACCTGTGCTCCCGAA........................................ 23 0 18 0.06 1 0 1 0 0 0
...........................................................................................................................................................................................................................CACAACAACCTGTGCTCCCGAAA......... 23 0 18 0.06 1 1 0 0 0 0
.............................................................................................................................................................................................CACAACAACCTGTGCTCCCGAAATT..................................... 25 0 18 0.06 1 0 0 1 0 0
...........................................................................................................................................................................................................................CACAACAACCTGTGCTCCCGAAATT....... 25 0 18 0.06 1 0 0 1 0 0
...........................................................................................................................................................................................................................CACAACAACCTGTGCTCCCGA........... 21 0 18 0.06 1 1 0 0 0 0
..........................................................................................................................................................................................................................CCACAACAACCTGTGCTCCCGAA.......... 23 0 18 0.06 1 0 1 0 0 0
.........................................................................................................................................................................................................................ACCACAACAACCTGTGCTCCCGA........... 23 0 18 0.06 1 0 1 0 0 0
.......................................CACTACAACCTGTGCACCAAC............................................................................................................................................................................................... 21 3 19 0.05 1 0 0 0 1 0
...................................................................................................CACTACAACCTGTGCACCAAC................................................................................................................................... 21 3 19 0.05 1 0 0 0 1 0
...............................................................................................................................................................................................CAACAACCTGTGCTCCCGA......................................... 19 0 20 0.05 1 0 0 1 0 0
................................TTACAACCACAACAACCTGT....................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0
.........................................................................................................................................................................................CAACCACAACAACCTGTGCTCC............................................ 22 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................................CAACAACCTGTGCTCCCGAAATT....... 23 0 20 0.05 1 1 0 0 0 0
CATTACAACCACAACAACCTGTGC................................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................................CAACAACCTGTGCTCCCGAAATTAC..... 25 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................................AACCTGTGCTCCCGAAATT....... 19 0 20 0.05 1 1 0 0 0 0
..............................CATTACAACCACAACAACCTGTGC..................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................................CAACCACAACAACCTGTGCTCC.............. 22 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................AACAACCTGTGCTCCCGAAATTACAAC................................ 27 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................................CAACAACCTGTGCTCCCGAAA......... 21 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................CAACAACCTGTGCTCCCGAAATT..................................... 23 0 20 0.05 1 1 0 0 0 0
................................TTACAACCACAACAACCTGC....................................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................................GAAATTACAACCACAACAACC...................... 21 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................CATTACAACCACAACAACCTGTGC................. 24 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................TTACAACCACAACAACCTGC................................................. 20 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................TGTGCTCCCGAAATTACAAC................................ 20 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................TACAACCACAACAACCTGT................................................. 19 0 20 0.05 1 0 0 1 0 0
.....................................................................................................................................................................................................................TACAACCACAACAACCTGT................... 19 0 20 0.05 1 0 0 1 0 0
............................................................................................................................................................................................................................ACAACAACCTGTGCTCCCGAA.......... 21 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................................AACAACCTGTGCTCCCGAAATTACAAC.. 27 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................CAACAACCTGTGCTCCCGAAATTAC................................... 25 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................CAACAACCTGTGCTCCCGAAA....................................... 21 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................TACAACCACAACAACCTGTGCTCC............................................ 24 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................ACAACAACCTGTGCTCCCGAA........................................ 21 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................................CAACAACCTGTGCTCCCGA........... 19 0 20 0.05 1 0 0 1 0 0
.................................TACAACCACAACAACCTGC....................................................................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................................................ACAACCACAACAACCTGTGCTCC.............. 23 0 20 0.05 1 1 0 0 0 0
....ACAACCACAACAACCTGTGCTCC................................................................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0
.................................TACAACCACAACAACCTGTG...................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
..............................AATTACAACCACAACAACCT......................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................TTACAACCACAACAACCTGT................................................. 20 0 20 0.05 1 0 0 1 0 0
.......................................................................................................................................................................................................TTTGCTCCCGAAATTACAACCAC............................. 23 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................TACAACCACAACAACCTGTG................................................ 20 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................AATTACAACCACAACAACCT................................................... 20 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................AACCTGTGCTCCCGAAATT..................................... 19 0 20 0.05 1 1 0 0 0 0
.................................TGCAACCACAACAACCTGT....................................................................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

TTAATGTTGGTGTTGTTGGACACGAGGTCATTAATGTTGGTGTTGTTGGACACGTGGTCTTTAATGTTGATGTTGTTGGGCACGTGGACTTCAATGCTGGTGTTGTTGGACACGTGGTCTTTAATGATGATGTTGTTGGGCACGTGGACTTCAATGCTGGTGTTGTTGGACACAAGGGCTTTAATGTTGGTGTTGTTGGACACGAGGGCTTTAATGTTGGTGTTGTTGGACACGAGGGCTTTAATGTTGGT
*******************************************************************************.((((((........................))))))..........................************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 V120
male body		 V046
embryo
 M026
head
 V058
head
.....................................................................................................GCTGTTGGCCACGTGGTCTC.................................................................................................................................. 20 3 20 1.40 28 26 0 2 0 0 0
.........................................GCTGTTGGCCACGTGGTCTC.............................................................................................................................................................................................. 20 3 20 1.40 28 26 0 2 0 0 0
.........................................GCTGTTGGCCACGTGGTCT............................................................................................................................................................................................... 19 2 15 1.20 18 17 0 1 0 0 0
.....................................................................................................GCTGTTGGCCACGTGGTCT................................................................................................................................... 19 2 15 1.20 18 17 0 1 0 0 0
......................................................................................................................................................................TGGACACAAGGGCTTTAATGTTGGT............................................................ 25 0 2 1.00 2 2 0 0 0 0 0
........................................CGCTGTTGGCCACGTGGTC................................................................................................................................................................................................ 19 3 20 0.55 11 9 0 0 0 1 1
....................................................................................................CGCTGTTGGCCACGTGGTC.................................................................................................................................... 19 3 20 0.55 11 9 0 0 0 1 1
.................................................................................................................................................................GTTGTTGGACACAAGGGCTTTAATGT................................................................ 26 0 2 0.50 1 1 0 0 0 0 0
................................................................................................................................................................TGTTGTTGGACACAAGGGCTTTA.................................................................... 23 0 2 0.50 1 0 0 1 0 0 0
.............................................................................................................................................................................AAGGGCTTTAATGTTGGTGTTGTT...................................................... 24 0 2 0.50 1 0 0 0 0 1 0
...............................................................................................................ACGTGGTCTTTAATGAGGATGTTGT................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0 0
.............................................................................................................................................................TGGTGTTGTTGGACACAAGGGCTT...................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
.................................................................................................................................................................GTTGTTGGACACAAGGGCTTTAAT.................................................................. 24 0 2 0.50 1 1 0 0 0 0 0
................................................................................................................CGTGGTCTTTAATGATGATGTTGT................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
.........................................GCTGTTGGCCACGTGGTC................................................................................................................................................................................................ 18 2 20 0.45 9 9 0 0 0 0 0
.....................................................................................................GCTGTTGGCCACGTGGTC.................................................................................................................................... 18 2 20 0.45 9 9 0 0 0 0 0
....................................................CGTGGTCTTTAATGTTGATGTTGT............................................................................................................................................................................... 24 0 7 0.43 3 3 0 0 0 0 0
......................CGAGGTCATTAATGTTGGTGTTGTT............................................................................................................................................................................................................ 25 0 12 0.42 5 3 2 0 0 0 0
......................CGAGGTCATTAATGTTGGTGTTGT............................................................................................................................................................................................................. 24 0 12 0.42 5 4 1 0 0 0 0
.................................................................................................................GTGGTCTTTAAGGATCATGT...................................................................................................................... 20 2 3 0.33 1 0 0 1 0 0 0
.................GGACACGAGGTCATTAATGTTGGT.................................................................................................................................................................................................................. 24 0 12 0.33 4 4 0 0 0 0 0
.........................................................................................................................................................................................................ACGAGGGCTTTAATGTTGGTGTTGT......................... 25 0 19 0.32 6 6 0 0 0 0 0
..............................................................................................................................................CGTGGACTTCAATGCTGGTGTTGTT.................................................................................... 25 0 7 0.29 2 0 0 0 2 0 0
.........................................................................................................................................GGGCACGTGGACTTCAATGCTGGTGT........................................................................................ 26 0 7 0.29 2 2 0 0 0 0 0
...................................................................................GTGGACTTCAATGCTGGTGTTGT................................................................................................................................................. 23 0 7 0.29 2 1 1 0 0 0 0
..................................................................................CGTGGACTTCAATGCTGGTGTTGT................................................................................................................................................. 24 0 7 0.29 2 1 0 0 1 0 0
.............................................................................GGGCACGTGGACTTCAATGCTGGTGT.................................................................................................................................................... 26 0 7 0.29 2 2 0 0 0 0 0
..............................................................................................................................................CGTGGACTTCAATGCTGGTGTTGT..................................................................................... 24 0 7 0.29 2 1 0 0 1 0 0
...............................................................................................................................................GTGGACTTCAATGCTGGTGTTGT..................................................................................... 23 0 7 0.29 2 1 1 0 0 0 0
..................................................................................CGTGGACTTCAATGCTGGTGTTGTT................................................................................................................................................ 25 0 7 0.29 2 0 0 0 2 0 0
............................................GTTGGACACGTGGTCTTTAATGTTGAT.................................................................................................................................................................................... 27 0 9 0.22 2 2 0 0 0 0 0
...............................................GGACACGTGGTCTTTAATGTTGATGTT................................................................................................................................................................................. 27 0 9 0.22 2 2 0 0 0 0 0
..........................................................................................................................................................................................................CGAGGGCTTTAATGTTGGTGTTGTT........................ 25 0 19 0.21 4 3 1 0 0 0 0
............................................................................................................................................................CTTGTGGTGGTGGACACAAGG.......................................................................... 21 3 5 0.20 1 0 0 0 0 0 1
................TGGACACGAGGTCATTAATGTTGGTGT................................................................................................................................................................................................................ 27 0 12 0.17 2 2 0 0 0 0 0
.....................ACGAGGTCATTAATGTTGGTGTTGT............................................................................................................................................................................................................. 25 0 12 0.17 2 2 0 0 0 0 0
...............................................................................GCACGTGGACTTCAATGCTGGTGTTGT................................................................................................................................................. 27 0 6 0.17 1 1 0 0 0 0 0
...........................................................................................................................................GCACGTGGACTTCAATGCTGGTGTTGT..................................................................................... 27 0 6 0.17 1 1 0 0 0 0 0
.................GGACACGAGGTCATTAATGTTGGTGT................................................................................................................................................................................................................ 26 0 12 0.17 2 2 0 0 0 0 0
........................................................................................................................................................................................................CACGAGGGCTTTAATGTTGGTGTTGT......................... 26 0 19 0.16 3 3 0 0 0 0 0
....................................................................................................CGCTGTTGGCCACGTGGTCT................................................................................................................................... 20 3 19 0.16 3 3 0 0 0 0 0
........................................CGCTGTTGGCCACGTGGTCT............................................................................................................................................................................................... 20 3 19 0.16 3 3 0 0 0 0 0
..........................................CTGTTGGCCACGTGGTCT............................................................................................................................................................................................... 18 2 20 0.15 3 3 0 0 0 0 0
......................................................................................................CTGTTGGCCACGTGGTCT................................................................................................................................... 18 2 20 0.15 3 3 0 0 0 0 0
.....................................................GTGGTCTTTAATGTTGATGTTGT............................................................................................................................................................................... 23 0 7 0.14 1 1 0 0 0 0 0
.....................................................................................GGACTTCAATGCTGGTGTTGTTGG.............................................................................................................................................. 24 0 7 0.14 1 1 0 0 0 0 0
....................................................................................TGGACTTCAATGCTGGAGTTGTTGG.............................................................................................................................................. 25 1 7 0.14 1 1 0 0 0 0 0
..................................................................................................................................GGTTGTTGGGCACGTGGACTTCAATGCT............................................................................................. 28 1 7 0.14 1 1 0 0 0 0 0
.................................................................................................................................................GGACTTCAATGCTGGTGTTGTTGG.................................................................................. 24 0 7 0.14 1 1 0 0 0 0 0
..............................................................................................................................................CATGGACTTCAATGCTGGTGTTGTT.................................................................................... 25 1 7 0.14 1 0 1 0 0 0 0
...........................................................................TTGGGCACGTGGACTTCAATGCTGGT...................................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0 0
.......................................................................................................................................TTGGGCACGTGGACTTCAATGCTGGT.......................................................................................... 26 0 7 0.14 1 1 0 0 0 0 0
......................................................................GGTTGTTGGGCACGTGGACTTCAATGCT......................................................................................................................................................... 28 1 7 0.14 1 1 0 0 0 0 0
...................................................ACGTGGTCTTTAATGTTGATGTTGT............................................................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0
................................................................................................................................................TGGACTTCAATGCTGGAGTTGTTGG.................................................................................. 25 1 7 0.14 1 1 0 0 0 0 0
..................................................................................CATGGACTTCAATGCTGGTGTTGTT................................................................................................................................................ 25 1 7 0.14 1 0 1 0 0 0 0
...................................................................................................................................................ACTTCAATGCTGGTGTTGTTGGAC................................................................................ 24 0 7 0.14 1 1 0 0 0 0 0
....................................................CGTGGTCTTTAATGTTGATGTTTT............................................................................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0 0
...................................................ACGTGGTCTTTAATGTGGATGTTGT............................................................................................................................................................................... 25 1 7 0.14 1 1 0 0 0 0 0
.......................................................................................ACTTCAATGCTGGTGTTGTTGGAC............................................................................................................................................ 24 0 7 0.14 1 1 0 0 0 0 0
.......................................................GGTCTTTAATGTTGAGGTTGTTGG............................................................................................................................................................................ 24 1 8 0.13 1 1 0 0 0 0 0
.................................................................................................................................................GGACTTCAATGCTGGTGT........................................................................................ 18 0 8 0.13 1 1 0 0 0 0 0
.....................................................................................GGACTTCAATGCTGGTGT.................................................................................................................................................... 18 0 8 0.13 1 1 0 0 0 0 0
.......................................................................................................TGTTGGCCACGTGGTCTC.................................................................................................................................. 18 2 18 0.11 2 2 0 0 0 0 0
...........................................TGTTGGCCACGTGGTCTC.............................................................................................................................................................................................. 18 2 18 0.11 2 2 0 0 0 0 0
...................................................ACGTGGTCTTTAATGTTGATGTTG................................................................................................................................................................................ 24 0 9 0.11 1 1 0 0 0 0 0
................................................GACACGTGGTCTTTAATGTTGATGTT................................................................................................................................................................................. 26 0 9 0.11 1 1 0 0 0 0 0
..........................................................................................................................................................................................................CGAGGGCTTTAATGTTGGTGTTGT......................... 24 0 19 0.11 2 2 0 0 0 0 0
........GGTGTTGTTGGACACGAGGTCATTG.......................................................................................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0
...................................................................................................................................................................................................TTGGACACGAGGGCTTTAATGTTGGT.............................. 26 0 20 0.10 2 2 0 0 0 0 0
........GGTGTTGTTGGACAGGAGGTCAT............................................................................................................................................................................................................................ 23 1 10 0.10 1 1 0 0 0 0 0
...........GTTGTTGGACACGAGGTCATTAATGG...................................................................................................................................................................................................................... 26 1 10 0.10 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................TTGGACACGAGGGCTTTAATGTTGGT 26 0 20 0.10 2 2 0 0 0 0 0
........GGTGTTGTTGGACACGAGGTCAT............................................................................................................................................................................................................................ 23 0 10 0.10 1 1 0 0 0 0 0
...............................................GGACACGTGGTCTTTAATGTTTTTGT.................................................................................................................................................................................. 26 2 11 0.09 1 0 1 0 0 0 0
.....................................................................................................................................TGTTGGGCACGTGGACTTCAAT................................................................................................ 22 0 11 0.09 1 1 0 0 0 0 0
.............................................................................................................................................ACGTGGACTTCAATGGTGGTGTTG...................................................................................... 24 1 11 0.09 1 1 0 0 0 0 0
.........................................................................TGTTGGGCACGTGGACTTCAAT............................................................................................................................................................ 22 0 11 0.09 1 1 0 0 0 0 0
.................................................................................ACGTGGACTTCAATGGTGGTGTTG.................................................................................................................................................. 24 1 11 0.09 1 1 0 0 0 0 0
...................ACACGAGGTCATTAATGTTGGTGTTGT............................................................................................................................................................................................................. 27 0 12 0.08 1 1 0 0 0 0 0
......................CGAGGTCATTAATGTGGGTGTTGT............................................................................................................................................................................................................. 24 1 12 0.08 1 1 0 0 0 0 0
......................CGAGGTCATTAATGTTGGTGTTG.............................................................................................................................................................................................................. 23 0 12 0.08 1 1 0 0 0 0 0
......................CGAGGTCATTAATGTTGGTGTTGGT............................................................................................................................................................................................................ 25 1 12 0.08 1 0 1 0 0 0 0
....................CACGAGGTCATTAATGTTGGTGTTGT............................................................................................................................................................................................................. 26 0 12 0.08 1 1 0 0 0 0 0
.........................GGTCATTAATGTTGGTGTTGTTGG.......................................................................................................................................................................................................... 24 0 12 0.08 1 1 0 0 0 0 0
...................ACACGAGGTCATTAATGTTGGTGTTG.............................................................................................................................................................................................................. 26 0 12 0.08 1 1 0 0 0 0 0
.....................ACGAGGTCATTAATGTTGGTGTTGTT............................................................................................................................................................................................................ 26 0 12 0.08 1 1 0 0 0 0 0
...........................TCATTAATGTTGGTGTTGTT............................................................................................................................................................................................................ 20 0 12 0.08 1 0 1 0 0 0 0
.......................GAGGTCATTAATGTTGGTGTTGT............................................................................................................................................................................................................. 23 0 12 0.08 1 1 0 0 0 0 0
................TGGACACGAGGTCATTAATGTTGGT.................................................................................................................................................................................................................. 25 0 12 0.08 1 0 0 1 0 0 0
.................GGACACGAGGTCATTAATGTTGGTGTT............................................................................................................................................................................................................... 27 0 12 0.08 1 1 0 0 0 0 0
.......................................GCGCTGTTGGCCACGTGGTCT............................................................................................................................................................................................... 21 3 13 0.08 1 1 0 0 0 0 0
...................................................................................................GCGCTGTTGGCCACGTGGTCT................................................................................................................................... 21 3 13 0.08 1 1 0 0 0 0 0
...........................................................................................................................................................................................TGGTGTTGTTGGACACGAGGGCC......................................... 23 1 18 0.06 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................TGGTGTTGTTGGACACGAGGGCC........... 23 1 18 0.06 1 0 1 0 0 0 0
.......................................GCGCTGTTGGCCACGTGGTC................................................................................................................................................................................................ 20 3 18 0.06 1 1 0 0 0 0 0
............................................................................................................................................................................................GGTGTTGTTGGACACGAGGGCTTT....................................... 24 0 18 0.06 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................GGTGTTGTTGGACACGAGGGCTTT......... 24 0 18 0.06 1 1 0 0 0 0 0
...................................................................................................GCGCTGTTGGCCACGTGGTC.................................................................................................................................... 20 3 18 0.06 1 1 0 0 0 0 0
.........................................................................................................................................................................................................ACGAGGGCTTTAATGTTGGTGCTGT......................... 25 1 19 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................................CACGAGGGCTCTAATGTTGGTGTTGTT........................ 27 1 19 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................................................................GAGGGCTTTAATGTTGGTGTTGT......................... 23 0 19 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................................................................TCACGAGGGCTTTAATGTTGGTGTTGT......................... 27 1 19 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................GAGGGCTTTAATGTTGGTGTTGTT........................ 24 0 19 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................................ACACGAGGGCTTTAATGTTGGTGTTGT......................... 27 0 19 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................................................ACGAGGGCTTTAATGTTGGTGTTGTT........................ 26 0 19 0.05 1 1 0 0 0 0 0
.......................................GCGGTGTTGGCCACGTGGTC................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 1
.............................................................................................................................................................................................................GGGCTTTAATGTTGGTGTTGTTGGACA................... 27 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................TGGACACGAGGGCTTTAATGTTGGT 25 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................................................................CGAGGGCTTTAATGTTGGT 19 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................TGATGGACACGAGGGTTTTAATGT.................................. 24 2 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................GGGCTTTAATGTTGGTGTTGTTGG...................... 24 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................................GTTGGACACGAGGGCTTTAATGTT................................. 24 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................TGGGGACGAGGGCTTCAATG................................... 20 3 20 0.05 1 0 0 0 0 0 1
.................................................................................................................................................................................GCTTTAATGTTGGTGTTGTTGGACAC................................................ 26 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................................................GGACACGAGGGCTTTAATGTTGGT.............................. 24 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................GCGGTGTTGGCCACGTGGTC.................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 1
..........................................................................................................................................................................................................CGAGGGCTTTAATGTTGGT.............................. 19 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................TGGACACGAGGGCTTTAATGTTGGT.............................. 25 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................................................GTTGGACACGAGGGCTTTAATGTT... 24 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................TTGTTGGACACGAGGGCTTTAATGT.................................. 25 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................GGGCTTTAATGTTGGTGTTGTTGG.................................................... 24 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................TCGGACACGCGGGCTTTA........ 18 2 20 0.05 1 0 0 0 0 1 0
...................................................................................................................................................................................................................................GGACACGAGGGCTTTAATGTTGGT 24 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................................................CCTTTAATGTTGGTGTTGTTGGAC.................... 24 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................GGGCTTTAATGTTGGTGTTGTTGGACA................................................. 27 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................GACACGAGGGCTTTAATGTTGGTGT............................ 25 0 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2L:6759684-6759934 - dya_249 AATTACAACCACAACAAC---CTGTGCTCCAG---TAATTACAACCACAACAACCTG---------------------------------------TGCACCAGAAATTACAA---------CTACAACAACCCGTGCACCT------------GAAGTTACG---ACCACAACAACCTGTGCACCAGAAATTACTACTACAACAACCCGTGCACCTGAAGTTACGACCACAACAACCT---------------------GTGTTCC---CGA------AATTACAACCACAACAACCTGTGCTCCCGAAAT---TACAACCACAACAACCTGTG-------------------CTCCCGAAATTACAACCA
droEre2 scaffold_4929:15079778-15080028 + AATTACAACTACAACACC---GTGTACACCGG---AAATTATAACTACAACAACCTG---------------------------------------TACACCAGAAATTACAA---------CTACAACACCGTGTACACCG------------GAAATTATA---ACTACAACAACCTGTACACCAGAAATTACAACTACAACACCGTGTACATCGGAAATTATAACTACAACAACCT---------------------GTACACA---AGA------AATTACAACTACAACAGCCTGTACACCAGAAAT---TACAACTACGACAACCTGTT-------------------CACCAGATGAGGAAACGA
droSec2 scaffold_5:4223059-4223279 + AATTACAACTACAACAAC---ATGTACACCAG---TAATTACAACTACAACAACCTG---------------------------------------TGTACCAAC------AA---------CCACAACAACCTGTACACCA------------------GTT---TCGACAACAACATGTACCCCAGAAATTACAACTACAACAACCTGTACACCA------GCTTCGACAACAACAT---------------------GTACCCC---AGA------AATTACAACTACAACAACCTGTGCACC---------AACAACCACAACAACTTGTG-------------------CACCA------ACAACCA
droSim2 2l:5949323-5949567 + AATTACAACTACAACAAC---CTGTGCACCAA---C------AACCACAACAACCTG---------------------------------------TGCACCAACAACCAGTGCACCAACAACCACAACAACCTGTACACCA------------GCAATCGTAACAACCACAACAACCTGTGCTCCAGAAATAACAACTACAACAACATGTACACCAGAAATTACAACTACAACAACCT---------------------GTGCACC---AG------------CAACCACAACCACGTGTGCACCAGGAAT---TACAACTACAACAACCTGTG-------------------CACCA------GCAACCA
dm3 chr2L:6152512-6152714 + CGTAACAACCACAACAAC---CTGTGCACCAA---C------AACCACTACAACCTG---------------------------------------TGCACCAAC------AA---------CCACAACAACCTGTGCACCA------------------ACA---ACCACAACAACCTGTGCACCA------ACAACCACAACAACCTGTGCACCA------ACAACCACAACAACCT---------------------GTGCACC---A------------ACAACCACTACAACCTGTGCACC---------AACAACCACAACAACCTGTG-------------------CACCA------ACAACCA
droEug1 scf7180000409692:150985-151214 + AACTACAACCACAACAAC---ATGTGCTTCAA---C------------------------------AACAACAACGACGACTA-CCACAA--------CAACCACAACCACAA---------CTACAACGACAA------CCACAACTACAACAACAACCACA---ACTACAACGACAACCACAACTACAACGACAACCACTACTACATGTGCTCCA------ACAACAACAACGACAA---------------------CGACAACTACTA---CCACTACCA---------------CAACAAC---------AACAACTACAACTT-------------------------CAACGACAACCACAACCA
droBia1 scf7180000302136:2051335-2051585 - AGTTACGACCACCACAGC---CTGTGCTTCTG---A------------------------------CATAAGCACAAAAACAA-CCACAACATGCG--CCCCAGAAACTTCGA---------CTACAACAACATGCGCCCCA------------GCAACTACG---ACTAGTACAACCACTGAGGCTCCAACCACGACTACAACAACATGTACGCCA------ACCACAACGACTACAA------CAT------------GCGCCCC---AGC------CACTACTACTACAACAACCACTGAGGCTCCAAC---CACGACTACAACAACATGTA-------------------CGCCA---ACTACAACGA
droTak1 scf7180000413278:2028-2227 + AA--AAAACCACAACAAC---CTGTGTGCCAG---AAA------CTACAACTACCTC---------------------------------------TGCATCCGAGA---------------TCACAACAACTTGTGTGAAA------------------AGA---ACCACAACAACCTGTGTTCCAGAAACT------ACAACAACCTCTGTGCTC------GAGACCACAACAACCT---------------------GTGTTCC---AGA------------AACTACAACAACCTTTGTT-G---------AAAAACCACAACAACCTGTG-------------------TTCCA------GAAACTA
droEle1 scf7180000491212:603639-603859 - AACGACAACTACAACCAC---ATGTGCCCCAA---C------------------------------AACAACTACAACCACATG------------TGCCCCAACAACAACCA---------CCACCATAA---------CG------------ACGACAACT---ACCACAACCACTTGTGCCCCAACAACAACCACCACAACAACCACTACGACA------ACTACTACTACAACAA---------------------------------C------AACGACAACTACAACCACATGTGCCCCAAC------AACAACTACAACCACATGTG-------------------CCCCAACAACAACCACCA
droRho1 scf7180000779365:12986-13194 + AACGACAACGACAACCAC---TTGTGCCCCAA---C------------------------------AACCACGACAACCACAA-CTA-----------CAA---------------------CTAAGGCTCCAA------CT------------ACAACTACA---ACCACAACCACTTGTGCCCCAACAACAACGACAACCACAACCACTGAGGCT------C---------CAACTACAACTACAACCACAACCACTTGTGCCCC---AA------------CAACAACGACAAC------------------------CACCACAACCACTA-------------------CCACCACGACTACGACCA
droFic1 scf7180000454055:1142566-1142828 - GGCTCCAACCACAACAACGACTTGTACCCCAAAAGCAACGACAACTACAACCACTTGTGCACCAACAAC------------------------------------AACGACAA---------CCACAACAACTTGTGCCCCA------------ACAACGACGACAACCACAACAACTTGTGCCCCA---ACAACAACCACAACAACTTGTGCACCA------ACAACAACGACAACCA------------CAACGT---------CTTGTG---CGCCAACGACAACCACAACAGCATGTGGCCCAACAAC---TAA---G-------------ACAACCACAACATCCTGCCCTGACGCAGTGACAACAA
droKik1 scf7180000302472:2654748-2654989 - GACCACATCAACTAC------GAGTGCTCCGG---AAGCCACAACCAC------T---------------------------------------------CCAGAGATTACCA---------CCTTAGGTACAAGTGCTCCG------------GAGACTACG---ACCTCAACTACGAGTGCCCCAGAGACCACGACTTCGACGACCAGTGCTCCG------GAGACCACGA---CCTCGACGA------------CCAGTGCTCC---AGACACTACGACTACAACCTCAACTACTAGCGCTCCGTTGAC---CACAGTTCCAACCACCAAAG-------------------CTCCTGAAACCACAACTA
droAna3 scaffold_12916:8046354-8046574 - TACGACAAGCACCACATC---CTGTGCGCCTA---C------TACCACAACCACCTG---------------------------------------TGAGCCTACTACAACAA---------GCACCACATCCTGTGCGCCT------------------ACT---ACCACAACCACCTGTGAGCCTACTACGACAAGCACCACATCCTGTGCGCCT------ACTACCACAACCACCT---------------------GTGAGCC---------------TACTACCACAACAACCTGCGCGCC---------TACTACCACAACAACCTGTG-------------------AGCCTACCACAACAACCA
droBip1 scf7180000394737:16709-16971 - AACCACTACCACAACAAC---CACTACTACAA---C------------------------------AACGACCACAACAACCA-CGACAA--------CAACCACAACGACAA---------CTACAACACCTTGTGCCCCT------------ACAACGACTTCCACTACAACGACAACCACTACC---ACGACCACCACAACAACTACTACAACA------ACCACGACAACAACCACGACAACAA---CCACGA---CAACAAC---CAC------TACCACAACTACAACACCGTGTGCCCCTACAAC---GAC---T-------------TCCACCACAACGACAACCACTACAACAACTACCACAA
dp5 4_group1:5090419-5090648 - AACGACAACTACAACTAC---TTGCTCGACAA---C------------------------------AACAACCACGACGACAA-CCACTA--------CAACAACAACCACGACTACAACAACCACGACTACAACCACCACT------------ACTACAACC---ACCACTACTACAACCACACCAACAACGACAACTACAACTACTTGCTCGACA------ACAACAACCA------------------------------------------------------CGACGACAACCACTACAACAACAAC---CACGACTACAACAACCACGA-------------------CAACAACAACCACTACTA
droPer2 scaffold_5:128205-128437 + AACAACCACGACGACAAC---CACTACTACAA---C------------------------------AACCACTACTACAACCA-CCA-----------CGA---------------------CAACAACAACCA------CT---------ACAACTACAACC---ACGACAACGACAACCACGACAACAACCACTACTACAACGACTTGGGCGACA------TCAACCACCA---CTACAACAA------------------CAACCACGA---CAACAACTACTACTACAACGACTTGCACGCCAGAAAC---AACCACTACAACAGCAACCA-------------------CTTGCGACAGTACAACTG
droWil2 scf2_1100000004515:2656614-2656816 + AATTACAACAACAACAAC---AAAAATTACAA---C------------------------------AACAACAACAACAACAA------------------ACATAATTACAA------CAACAACAACAACAACAACAAAA---------------ATTACA---ACAACAACAACAACAACAACAAAAATTACAACAACAACAAAAAT------------TACAACAACAACAAC------------------------------------------AATTACAACAACAACAA---CAAAAAT---------TACAACAACAACAA-------------------------CAACAAAAATTACAACAA
droVir3 scaffold_13246:1774180-1774388 - TACAACAACAACAAC------CACTACAAAGG---CAACTACTGCTACAACAACCAC---------------------------------------T------T------GCACCACACCAACAACAACCACTTGCACCACA---------------------------ACAACAACCACTACTACAACAACAACAACTACTACAACAACCACCACA------ACTACAACAACAACCT---------------------GCACCAC---AC------------CCACAACAACCACTTGCACAAC---------------AACAACAACCACTA-------------------CGACAACAACCACCACTA
droMoj3 scaffold_6500:4167619-4167842 + CACCACAACAACAACAAC---TACAACAAAAA---C------------------------------AACGACAACAAC------------------TACGCCCAAAACAACCACA---ACAACAACGACTACCTGCACCACA------------------ACA---ACGACAACCACAACAAAAACAACGACAACGACAACAACCACTTGCACCACA------ACAACAACAACAA------------------------CTACAAC---AAA---------AACAACGACAACAAC---TACGCCCAAAACAACCACAACAACAACAA-------------------------CCACTTGCACCACACCAA
droGri2 scaffold_14853:4311460-4311679 + AACGACACCAACAACAAC---ACCTACAACAA---C------------------------------ACCAACAACAACACCAA-CAACAA--------CACCTACAACGACGC---------CAACAACAACATCTACAACA---------------------------ACACCAACGACAACACCAACAACAACACCTACAACAACACCTACAACA------ACACCTACAACAACAC---------------------CT-CACC---AAC------ACCTACAACAACACCAACAACAACACC---------TACAACAACACCAA-------------------------CAACAACACCTACAACCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
AATTACAACCACAACAAC---CTGTGCTCCAG---TAATTACAACCACAACAACCTG---------------------------------------TGCACCAGAAATTACAA---------CTACAACAACCCGTGCACCT------------GAAGTTACG---ACCACAACAACCTGTGCACCAGAAATTACTACTACAACAACCCGTGCACCTGAAGTTACGACCACAACAACCT---------------------GTGTTCC---CGA------AATTACAACCACAACAACCTGTGCTCCCGAAAT---TACAACCACAACAACCTGTG-------------------CTCCCGAAATTACAACCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................TGTGCACCAGAAATTACTACTACAAC........................................................................................................................................................................2620.50101000000000
...............................................................................................................................................................TACG---ACCACAACAACCTGTGCACC..........................................................................................................................................................................................2440.25100100000000
...............................................................................................................................................................TACG---ACCACAACAACCTGTGCACCAGA.......................................................................................................................................................................................2740.25101000000000
..................................................................................................................................................................G---ACCACAACAACCTGTGCACCAG........................................................................................................................................................................................2340.25101000000000
...TACAACCACAACAAC---CTGTGCTCCAG---T................................................................................................................................................................................................................................................................................................................................................27100.20200110000000
...........CAACAAC---CTGTGCTCCAG---T................................................................................................................................................................................................................................................................................................................................................19100.20200110000000
...........................TCCAG---TAATTACAACCACAACAACCTG---------------------------------------....................................................................................................................................................................................................................................................................................27120.17202000000000
......................TGTGCTCCAG---TAATTACAACCACAAC.................................................................................................................................................................................................................................................................................................................................26120.17202000000000
.............................................................................................................................................................GTTACG---ACCACAACAACCTGC...............................................................................................................................................................................................2170.14100100000000
...........................................................................................................................................................................................................................AGTTACGACCACAACAACCT---------------------GC..............................................................................................................2270.14100100000000
............................................................................................................................................................................................................................GTTACGACCACAACAACCT---------------------GT..............................................................................................................2170.14100100000000
.........................................................................................................................................................................................................................GAAGTTACGACCACAACAACC......................................................................................................................................2170.14100100000000
............................................................................................................................................................AGTTACG---ACCACAACAACCTGT...............................................................................................................................................................................................2270.14100100000000
..............................................................................................................CAA---------CTACAACAACCCGTGC..........................................................................................................................................................................................................................................1970.14100100000000
..........................................................................................................................................................GAAGTTACG---ACCACAACAACC..................................................................................................................................................................................................2170.14100100000000
............................................................................................................................................................AGTTACG---ACCACAACAACCTGC...............................................................................................................................................................................................2270.14100100000000
............................................................................................................................................................................................................................GTTACGACCACAACAACCT---------------------GC..............................................................................................................2170.14100100000000
...........................................................................................................................................................................................................................AGTTACGACCACAACAACCT---------------------GT..............................................................................................................2270.14100100000000
.............................................................................................................................................................GTTACG---ACCACAACAACCTGT...............................................................................................................................................................................................2170.14100100000000
..........................................AACCACAACAACCTG---------------------------------------TGCACCAGAAAT........................................................................................................................................................................................................................................................................2790.11101000000000
.........CACAACAAC---CTGTGCTCCAG---T................................................................................................................................................................................................................................................................................................................................................21100.10100100000000
...........CAACAAC---CTGTGCTCCAG---TAATTACAAC.......................................................................................................................................................................................................................................................................................................................................28100.10100100000000
....ACAACCACAACAAC---CTGTGCTCCAG---T................................................................................................................................................................................................................................................................................................................................................26100.10101000000000
............AACAAC---CTGTGCTCCAG---TA...............................................................................................................................................................................................................................................................................................................................................19100.10100100000000
.........CACAACAAC---CTGTGCTCCAG---TAATTAC..........................................................................................................................................................................................................................................................................................................................................27100.10100100000000
.......ACCACAACAAC---CTGTGCTCCAG---TA...............................................................................................................................................................................................................................................................................................................................................24100.10101000000000
..................................................................................................................................................................................................................................................................................................CAACAACCTGTGCTCCCGAAAT---.........................................................22200.10200200000000
.....................................ATTACAACCACAACAACCTG---------------------------------------TGCACC..............................................................................................................................................................................................................................................................................26100.10101000000000
........CCACAACAAC---CTGTGCTCCAG---T................................................................................................................................................................................................................................................................................................................................................22100.10100100000000
............AACAAC---CTGTGCTCCAG---TAATTACAAC.......................................................................................................................................................................................................................................................................................................................................27100.10100100000000
...................................................................................................................................................................................................................................................................................................................................CAACAACCTGTG-------------------CTCCCGAAAT........22200.10200200000000
........................................ACAACCACAACAACCTG---------------------------------------TGCAC...............................................................................................................................................................................................................................................................................22120.08100100000000
..........................................AACCACAACAACCTG---------------------------------------TGCACCA.............................................................................................................................................................................................................................................................................22120.08101000000000
.........................GCTCCAG---TAATTACAACCACAACAACC.............................................................................................................................................................................................................................................................................................................................27120.08100100000000
.......ACCACAACAAC---CTGTGCTCCA.....................................................................................................................................................................................................................................................................................................................................................21140.07101000000000
...TACAACCACAACAAC---CTGTGCTCCAG---C................................................................................................................................................................................................................................................................................................................................................27140.07100100000000
..........................................................................................................................................................................................................................................................................................TACAACCACAACAACCTGTGCTCCC.................................................................25170.06101000000000
...........................................................................................................................................................................................................................................................................................................................TACAACCACAACAACCTGTG-------------------CTCCC.............25170.06101000000000
.............................................................................................................................................................................................................................................................................................AACCACAACAACCTGTGCTCCCGAAAT---.........................................................27170.06101000000000
..............................................................................................................................................................................................................................................................................................................................AACCACAACAACCTGTG-------------------CTCCCGAAAT........27170.06101000000000
................................................................................................................................................................................................................................................................................................CACAACAACCTGTGCTCCCGA...............................................................21180.06100100000000
................................................................................................................................................................................................................................................................................................CACAACAACCTGTGCTCCCGAAA.............................................................23180.06100100000000
..............................................................................................................................................................................................................................................................................................ACCACAACAACCTGTGCTCCCGA...............................................................23180.06101000000000
...............................................................................................................................................................................................................................................................................................CCACAACAACCTGTGCTCCCGAA..............................................................23180.06101000000000
.................................................................................................................................................................................................................................................................................................................................CACAACAACCTGTG-------------------CTCCCGAAA.........23180.06100100000000
................................................................................................................................................................................................................................................................................................CACAACAACCTGTGCTCCCGAAAT---T........................................................25180.06100010000000
.................................................................................................................................................................................................................................................................................................................................CACAACAACCTGTG-------------------CTCCCGAAATT.......25180.06100010000000
.................................................................................................................................................................................................................................................................................................................................CACAACAACCTGTG-------------------CTCCCGA...........21180.06100100000000
................................................................................................................................................................................................................................................................................................................................CCACAACAACCTGTG-------------------CTCCCGAA..........23180.06101000000000
...............................................................................................................................................................................................................................................................................................................................ACCACAACAACCTGTG-------------------CTCCCGA...........23180.06101000000000
..................................................................................................................................................................................................................................................................................................CAACAACCTGTGCTCCCGA...............................................................19200.05100010000000
......................................TTACAACCACAACAACCTG---------------------------------------T...................................................................................................................................................................................................................................................................................20200.05100010000000
............................................................................................................................................................................................................................................................................................CAACCACAACAACCTGTGCTCC..................................................................22200.05100100000000
...................................................................................................................................................................................................................................................................................................................................CAACAACCTGTG-------------------CTCCCGAAATT.......23200.05100100000000
...................................................................................................................................................................................................................................................................................................................................CAACAACCTGTG-------------------CTCCCGAAATTAC.....25200.05100100000000
.......................................................................................................................................................................................................................................................................................................................................AACCTGTG-------------------CTCCCGAAATT.......19200.05100100000000
.............................................................................................................................................................................................................................................................................................................................CAACCACAACAACCTGTG-------------------CTCC..............22200.05100100000000
...................................................................................................................................................................................................................................................................................................AACAACCTGTGCTCCCGAAAT---TACAAC...................................................27200.05100100000000
...................................................................................................................................................................................................................................................................................................................................CAACAACCTGTG-------------------CTCCCGAAA.........21200.05100100000000
..................................................................................................................................................................................................................................................................................................CAACAACCTGTGCTCCCGAAAT---T........................................................23200.05100100000000
......................................TTACAACCACAACAACCTG---------------------------------------C...................................................................................................................................................................................................................................................................................20200.05100100000000
...................................................................................................................................................................................................................................................................................................................GAAAT---TACAACCACAACAACC.........................................21200.05100100000000
.........................................................................................................................................................................................................................................................................................TTACAACCACAACAACCTGC.......................................................................20200.05100100000000
..........................................................................................................................................................................................................................................................................................................TGTGCTCCCGAAAT---TACAAC...................................................20200.05100100000000
..........................................................................................................................................................................................................................................................................................TACAACCACAACAACCTGT.......................................................................19200.05100010000000
...........................................................................................................................................................................................................................................................................................................................TACAACCACAACAACCTGT......................................19200.05100010000000
..................................................................................................................................................................................................................................................................................................................................ACAACAACCTGTG-------------------CTCCCGAA..........21200.05100100000000
....................................................................................................................................................................................................................................................................................................................................AACAACCTGTG-------------------CTCCCGAAATTACAAC..27200.05100100000000
..................................................................................................................................................................................................................................................................................................CAACAACCTGTGCTCCCGAAAT---TAC......................................................25200.05100100000000
..................................................................................................................................................................................................................................................................................................CAACAACCTGTGCTCCCGAAA.............................................................21200.05100100000000
..........................................................................................................................................................................................................................................................................................TACAACCACAACAACCTGTGCTCC..................................................................24200.05101000000000
.................................................................................................................................................................................................................................................................................................ACAACAACCTGTGCTCCCGAA..............................................................21200.05100100000000
...................................................................................................................................................................................................................................................................................................................................CAACAACCTGTG-------------------CTCCCGA...........19200.05100010000000
.......................................TACAACCACAACAACCTG---------------------------------------C...................................................................................................................................................................................................................................................................................19200.05100100000000
............................................................................................................................................................................................................................................................................................................................ACAACCACAACAACCTGTG-------------------CTCC..............23200.05100100000000
....ACAACCACAACAAC---CTGTGCTCC......................................................................................................................................................................................................................................................................................................................................................23200.05100100000000
.......................................TACAACCACAACAACCTG---------------------------------------TG..................................................................................................................................................................................................................................................................................20200.05100100000000
....................................AATTACAACCACAACAACCT............................................................................................................................................................................................................................................................................................................................20200.05100100000000
.........................................................................................................................................................................................................................................................................................TTACAACCACAACAACCTGT.......................................................................20200.05100010000000
..........................................................................................................................................................................................................................................................................................TACAACCACAACAACCTGTG......................................................................20200.05100100000000
.......................................................................................................................................................................................................................................................................................AATTACAACCACAACAACCT.........................................................................20200.05100100000000
......................................................................................................................................................................................................................................................................................................AACCTGTGCTCCCGAAAT---T........................................................19200.05100100000000
droEre2
AATTACAACTACAACACC---GTGTACACCGG---AAATTATAACTACAACAACCTG---------------------------------------TACACCAGAAATTACAA---------CTACAACACCGTGTACACCG------------GAAATTATA---ACTACAACAACCTGTACACCAGAAATTACAACTACAACACCGTGTACATCGGAAATTATAACTACAACAACCT---------------------GTACACA---AGA------AATTACAACTACAACAGCCTGTACACCAGAAAT---TACAACTACGACAACCTGTT-------------------CACCAGATGAGGAAACGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................TACAACTACAACAGCCTGT.......................................................................1911.0010100000
...................................................................................................................................................................................................................ACATCGGAAATTATAACTAC.............................................................................................................................................2011.0010100000
....................................................................................................................................................................................................................CATCGGAAATTATAACTACAACAACCT---------------------GT..............................................................................................................2911.0010100000
................................................................................................................................................................................................................................................................................................................................CTACGACAACCTGTT-------------------CACCAGATGAG.......2611.0010001000
............................................................................................................................................................................................................................................................................................................................................GTT-------------------CACCAGATGAGGAAA...1811.0010001000
.......................................................................................................................................................................................................................................................................CACA---AGA------AATTACAACTACAACAGCCT.........................................................................2711.0010001000
...................................................................................................................................................................................................................ACATCGGAAATTATAACTACAAC..........................................................................................................................................2311.0010100000
.......................................................................................................................................................................................................................................................................................AATTACAACTACAACAGCCTGT.......................................................................2211.0010100000
.................................................................................................................................................................................................................................................................................................................................TACGACAACCTGTT-------------------CACCAG............2011.0010001000
...........................................................................................................................................................................................................................................................................................................................................TGTT-------------------CACCAGATGAGGAAAC..2011.0010100000
................................................................................................................................................................ATA---ACTACAACAACCTGTAC.............................................................................................................................................................................................2050.4020200000
........................................ATAACTACAACAACCTG---------------------------------------TAC.................................................................................................................................................................................................................................................................................2050.4020200000
...............................................................................................................................................................................................................................ATAACTACAACAACCT---------------------GTAC............................................................................................................2050.4020200000
......................................................................................................................................................................................................................................................................ACACA---AGA------AATTACAACTACAAC..............................................................................2330.3310100000
..........................................................................................................ATTACAA---------CTACAACACCGTGTACACC.......................................................................................................................................................................................................................................2640.2510100000
........................................................................................................................................ACACCG------------GAAATTATA---ACTACAACAACC..................................................................................................................................................................................................2740.2510100000
......................................................................................................................................................................................................................................CAACAACCT---------------------GTACACA---AGA------AATTACAAC....................................................................................2840.2510100000
........CTACAACACC---GTGTACACCGG---AAATT............................................................................................................................................................................................................................................................................................................................................2640.2510001000
..........................................................................................................................CTACAACACCGTGTACACCG------------GAAATT....................................................................................................................................................................................................................2640.2510001000
...........................................................................................................TTACAA---------CTACAACACCGTGTACACCG------------GA........................................................................................................................................................................................................................2840.2510001000
..............................................................................................................CAA---------CTACAACACCGTGTACACCG------------G.........................................................................................................................................................................................................................2440.2510100000
.....CAACTACAACACC---GTGTACACCGG---.................................................................................................................................................................................................................................................................................................................................................2440.2510100000
..........................CACCGG---AAATTATAACTACAACAACCT............................................................................................................................................................................................................................................................................................................................2740.2510100000
............................................................................................................................ACAACACCGTGTACACCG------------GAAATT....................................................................................................................................................................................................................2440.2510100000
.........................ACACCGG---AAATTATAACTACAACAACC.............................................................................................................................................................................................................................................................................................................................2740.2510100000
..........ACAACACC---GTGTACACCGG---AAATT............................................................................................................................................................................................................................................................................................................................................2440.2510100000
..TTACAACTACAACACC---GTGTACACCGG---A................................................................................................................................................................................................................................................................................................................................................2840.2510001000
.........................................................................................................................................CACCG------------GAAATTATA---ACTACAACAACCT.................................................................................................................................................................................................2740.2510100000
.ATTACAACTACAACACC---GTGTACACC......................................................................................................................................................................................................................................................................................................................................................2640.2510100000
..............................................................................................................................................................................................................................TATAACTACAACAACCT---------------------GTACAC..........................................................................................................2350.2010100000
...............................................................................................................................................................TATA---ACTACAACAACCTGT...............................................................................................................................................................................................1950.2010100000
..............................................................................................................................................................................................................................TATAACTACAACAACCT---------------------GT..............................................................................................................1950.2010100000
..................................................................................................CACCAGAAATTACAA---------CTACAAC...................................................................................................................................................................................................................................................2250.2010100000
...........................................................................................................................................................................AACAACCTGTACACCAGAAATTAC.................................................................................................................................................................................2450.2010100000
...............................................................................................................................................................................................TTACAACTACAACACCGTGT.................................................................................................................................................................2050.2010001000
...........................................................................................................TTACAA---------CTACAACACCGTGT............................................................................................................................................................................................................................................2050.2010001000
...............................................CAACAACCTG---------------------------------------TACACCAGA...........................................................................................................................................................................................................................................................................1950.2010001000
...............................................................................................................................................................TATA---ACTACAACAACCTGTACAC...........................................................................................................................................................................................2350.2010100000
........................................................................................................................................................................................CCAGAAATTACAACTACAACACCGTGTAC...............................................................................................................................................................2950.2010100000
...........................................................................................................................................................................AACAACCTGTACACCAGAAATTACAACT.............................................................................................................................................................................2850.2010100000
..........................................................................................................ATTACAA---------CTACAACACCGC..............................................................................................................................................................................................................................................1950.2010100000
................................................................................................................................................................ATA---ACTACAACAACCTGTA..............................................................................................................................................................................................1950.2010100000
.............................................................................................................................................................................................AATTACAACTACAACACCGTGT.................................................................................................................................................................2250.2010001000
............................................................................................................................................................AATTATA---ACTACAACAACCT.................................................................................................................................................................................................2050.2010100000
AATTACAACTACAACACC---GTGT...........................................................................................................................................................................................................................................................................................................................................................2250.2010001000
.................................................................................................ACACCAGAAATTACAA---------CTACAACACC................................................................................................................................................................................................................................................2650.2010100000
.............................................................................................................................................................ATTATA---ACTACAACAACCTGT...............................................................................................................................................................................................2150.2010100000
...........................................................................................................................................................................................................................AATTATAACTACAACAACCT---------------------GT..............................................................................................................2250.2010001000
.......................................TATAACTACAACAACCTG---------------------------------------TACAC...............................................................................................................................................................................................................................................................................2350.2010100000
.....................................................................................................................................................................................ACACCAGAAATTACAACTACAACACC.....................................................................................................................................................................2650.2010100000
........................................ATAACTACAACAACCTG---------------------------------------TA..................................................................................................................................................................................................................................................................................1950.2010100000
..........................................................................................................ATTACAA---------CTACAACACCGTGT............................................................................................................................................................................................................................................2150.2010100000
.ATTACAACTACAACACC---GTGT...........................................................................................................................................................................................................................................................................................................................................................2150.2010100000
....................................AATTATAACTACAACAACCT............................................................................................................................................................................................................................................................................................................................2050.2010100000
.....................................ATTATAACTACAACAACCTG---------------------------------------T...................................................................................................................................................................................................................................................................................2150.2010100000
....................................AATTATAACTACAACAACCTG---------------------------------------T...................................................................................................................................................................................................................................................................................2250.2010001000
.ATTACAACTACAACACC---GC.............................................................................................................................................................................................................................................................................................................................................................1950.2010100000
...............................................................................................................................................................................................................................ATAACTACAACAACCT---------------------GTA.............................................................................................................1950.2010100000
..............................................................................................................................................................................................ATTACAACTACAACACCGTGT.................................................................................................................................................................2150.2010100000
......................................................................................................................................................................................CACCAGAAATTACAACTACAAC........................................................................................................................................................................2250.2010100000
...........................................................................................................................................................................................................................AATTATAACTACAACAACCT---------------------................................................................................................................2050.2010100000
..TTACAACTACAACACC---GTGT...........................................................................................................................................................................................................................................................................................................................................................2050.2010001000
.......................................TATAACTACAACAACCTG---------------------------------------T...................................................................................................................................................................................................................................................................................1950.2010100000
..............................................................................................................................................................................................ATTACAACTACAACACCGC...................................................................................................................................................................1950.2010100000
................................................AACAACCTG---------------------------------------TACACCAGAAATTACAA---------CT........................................................................................................................................................................................................................................................2850.2010100000
.........................................................................................................AATTACAA---------CTACAACACCGTGT............................................................................................................................................................................................................................................2250.2010001000
............................................................................................................................................................AATTATA---ACTACAACAACCTGT...............................................................................................................................................................................................2250.2010001000
............................................................................................................................................................................................................................ATTATAACTACAACAACCT---------------------GT..............................................................................................................2150.2010100000
....................................................................................................CCAGAAATTACAA---------CTACAACACCGTGTAC..........................................................................................................................................................................................................................................2950.2010100000
..........................................................................................................................................................................CAACAACCTGTACACCAGA.......................................................................................................................................................................................1950.2010001000
................................................AACAACCTG---------------------------------------TACACCAGAAATTAC.....................................................................................................................................................................................................................................................................2450.2010100000
.................................................................................................................................................................................CTGTACACCAGAAATTACAACTA............................................................................................................................................................................2360.1710100000
.........................................................................................................................................................................................................................................................................................................CTGTACACCAGAAAT---TACAACTA.................................................2360.1710100000
......................................................CTG---------------------------------------TACACCAGAAATTACAA---------CTA.......................................................................................................................................................................................................................................................2360.1710100000
droSec2
AATTACAACTACAACAAC---ATGTACACCAG---TAATTACAACTACAACAACCTG---------------------------------------TGTACCAAC------AA---------CCACAACAACCTGTACACCA------------------GTT---TCGACAACAACATGTACCCCAGAAATTACAACTACAACAACCTGTACACCA------GCTTCGACAACAACAT---------------------GTACCCC---AGA------AATTACAACTACAACAACCTGTGCACC---------AACAACCACAACAACTTGTG-------------------CACCA------ACAACCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................CCAG---TAATTACAACTACAACAACCTG---------------------------------------T...................................................................................................................................................................................................................................................................................2711.0010010
.........................................................................................................................................................................................................AACAACCTGTACACCA------GCTT.................................................................................................................................................2011.0010010
......................................................................................................AAC------AA---------CCACAACAACCTGT............................................................................................................................................................................................................................................1960.1710010
droSim2
AATTACAACTACAACAAC---CTGTGCACCAA---C------AACCACAACAACCTG---------------------------------------TGCACCAACAACCAGTGCACCAACAACCACAACAACCTGTACACCA------------GCAATCGTAACAACCACAACAACCTGTGCTCCAGAAATAACAACTACAACAACATGTACACCAGAAATTACAACTACAACAACCT---------------------GTGCACC---AG------------CAACCACAACCACGTGTGCACCAGGAAT---TACAACTACAACAACCTGTG-------------------CACCA------GCAACCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................ACC---AG------------CAACCACAACCACGTGT.......................................................................2211.00100000000000100000
................................................AACAACCTG---------------------------------------TGCACCAACAACCAGTGCA.................................................................................................................................................................................................................................................................2811.00100100000000000000
................................................................................................................................................................GTAACAACCACAACAACCT.................................................................................................................................................................................................1950.60300300000000000000
........................................................................................................................................ACACCA------------GCAATCGTAACAAC............................................................................................................................................................................................................2050.40200200000000000000
................................................................................................................................................................GTAACAACCACAACAACC..................................................................................................................................................................................................1850.40200200000000000000
............................................................................................................................................................AATCGTAACAACCACAACAACCTGT...............................................................................................................................................................................................2540.25100100000000000000
...............................................................................................................................................................CGTAACAACCACAACAACCTG................................................................................................................................................................................................2150.20100100000000000000
.................................................................................................................CACCAACAACCACAACAACCTGTACACC.......................................................................................................................................................................................................................................2850.20100100000000000000
................................................................................................................................................................GTAACAACCACAACAACCTG................................................................................................................................................................................................2050.20100100000000000000
..............................................................................................................................AACAACCTGTACACCA------------GCAATCGT..................................................................................................................................................................................................................2450.20100100000000000000
.....................................................................................................................................TGTACACCA------------GCAATCGTAACAACCA..........................................................................................................................................................................................................2550.20100000000001000000
.........................................................................................................................................CACCA------------GCAATCGTAACAACCA..........................................................................................................................................................................................................2150.20100000000000100000
......................................................................................................................................GTACACCA------------GCAATCGTAAC...............................................................................................................................................................................................................1950.20100100000000000000
..............................................................................................................................AACAACCTGTACACCA------------GCAATC....................................................................................................................................................................................................................2250.20100000000000100000
................................................................................................................................CAACCTGTACACCA------------GCAATCGT..................................................................................................................................................................................................................2250.20100100000000000000
............................................................................................................................ACAACAACCTGTACACCA------------GCAATCGT..................................................................................................................................................................................................................2650.20100100000000000000
................................................................................................................GCACCAACAACCACAACAACCTGTA...........................................................................................................................................................................................................................................2550.20100000000000100000
.ATTACAACTACAACAAC---CTGT...........................................................................................................................................................................................................................................................................................................................................................21120.17200100000000100000
......................................................................................................................................................................................................................................................................................................................AT---TACAACTACAACAACCTGT......................................21120.17200100000000100000
............................................................................................................................................................................................................................ATTACAACTACAACAACCT---------------------GT..............................................................................................................21120.17200100000000100000
.ATTACAACTACAACAAC---CTG............................................................................................................................................................................................................................................................................................................................................................20130.15200200000000000000
............................................................................................................................................................................................................................ATTACAACTACAACAACCT---------------------G...............................................................................................................20130.15200200000000000000
......................................................................................................................................................................................................................................................................................................................AT---TACAACTACAACAACCTG.......................................20130.15200200000000000000
..............................................................................................................................................................................................................................................................................................................................AACTACAACAACCTGTG-------------------CACC..............21100.10100000000000100000
......AACTACAACAAC---CTGTGCACC......................................................................................................................................................................................................................................................................................................................................................21100.10100000000000100000
.................................................................................................................................................................................................................................AACTACAACAACCT---------------------GTGCACC---......................................................................................................21100.10100000000000100000
.............................................................................................................................................................................................................................TTACAACTACAACAACCT---------------------GT..............................................................................................................20120.08100100000000000000
..TTACAACTACAACAAC---CTGT...........................................................................................................................................................................................................................................................................................................................................................20120.08100100000000000000
.......................................................................................................................................................................................................................................................................................................................T---TACAACTACAACAACCTGT......................................20120.08100100000000000000
............................................................................................................................................................................................................................ATTACAACTACAACAACCT---------------------GG..............................................................................................................21130.08100100000000000000
......................................................................................................................................................................................................................................................................................................................AT---TACAACTACAACAACCTGG......................................21130.08100100000000000000
.ATTACAACTACAACAAC---CTGG...........................................................................................................................................................................................................................................................................................................................................................21130.08100100000000000000
..................................................................................................................................................................AACAACCACAACAACCTGT...............................................................................................................................................................................................19150.07100100000000000000
.....................................................................................................................AACAACCACAACAACCTGT............................................................................................................................................................................................................................................19150.07100100000000000000
..............................AA---C------AACCACAACAACCTG---------------------------------------T...................................................................................................................................................................................................................................................................................19150.07100100000000000000
..............................AA---C------AACCACAACAACCTG---------------------------------------C...................................................................................................................................................................................................................................................................................19180.06100100000000000000
..................................................................................................................................................................AACAACCACAACAACCTGC...............................................................................................................................................................................................19180.06100100000000000000
.....................................................................................................................AACAACCACAACAACCTGC............................................................................................................................................................................................................................................19180.06100100000000000000
dm3
CGTAACAACCACAACAAC---CTGTGCACCAA---C------AACCACTACAACCTG---------------------------------------TGCACCAAC------AA---------CCACAACAACCTGTGCACCA------------------ACA---ACCACAACAACCTGTGCACCA------ACAACCACAACAACCTGTGCACCA------ACAACCACAACAACCT---------------------GTGCACC---A------------ACAACCACTACAACCTGTGCACC---------AACAACCACAACAACCTGTG-------------------CACCA------ACAACCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.................................................................................................GCACCAAC------AA---------CCACAACAACCTGT............................................................................................................................................................................................................................................24200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GCACCA------------------ACA---ACCACAACAACCTGT...............................................................................................................................................................................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GCACC---------AACAACCACAACAACCTGT......................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GCACC---A------------ACAACCACTACAACCTGTGC.....................................................................26190.1630000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCACCAA---C------AACCACTACAACCTG---------------------------------------TGC.................................................................................................................................................................................................................................................................................26190.1630000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GCACCA------------------ACA---ACCACAACAACCT.................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................ACAACAACCT---------------------GTGCACC---A------------ACAACCA..................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GCACCA------ACAACCACAACAACCT...................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................ACAACAACCTGTGCACCA------ACAACCA..............................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................ACAACCTG---------------------------------------TGCACCAAC------AA---------CCA.......................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................ACAACAACCTGTGCACCA------ACAACCA............................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................ACAACCTGTGCACC---------AACAACCA.................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ACAACAACCTGTGCACCA------------------ACA---ACCA..........................................................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GCACC---------AACAACCACAACAACCT........................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCACCAA---C------AACCACTACAACCTG---------------------------------------TGCA................................................................................................................................................................................................................................................................................27190.1120000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GCACC---A------------ACAACCACTACAACCTGTGCA....................................................................27190.1120000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCACCAA---C------AACCACTACAACCTG---------------------------------------T...................................................................................................................................................................................................................................................................................24200.1020000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GCACCA------ACAACCACAACAACCTGT.................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TACAACCTGTGCACC---------AACA.....................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................ACAACAACCTGTG-------------------CACCA------ACAACCA25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GCACCAAC------AA---------CCACAACAACCT..............................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TACAACCTG---------------------------------------TGCACCAAC------A....................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................GCACCA------ACAACCACAACAACCT---------------------................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................GCACCA------ACAACCACAACAACCT---------------------GT..............................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GCACC---A------------ACAACCACTACAACCTGT.......................................................................24200.1020000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CACC---A------------ACAACCACTACAACCTGTGCACC---------.........................................................28190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CACC---A------------ACAACCACTACAACCTGTGC.....................................................................25190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CACCAA---C------AACCACTACAACCTG---------------------------------------TGC.................................................................................................................................................................................................................................................................................25190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CACCAA---C------AACCACTACAACCTG---------------------------------------TGCACC..............................................................................................................................................................................................................................................................................28190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................A---------CCACAACAACCTGTGCACCA------------------ACA---ACC...........................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................ACAACCTGTGCACCA------ACAAC..............................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GCACCAAC------AA---------CCACAACAACC...............................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................GCACCA------ACAACCACAACA.........................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................A------ACAACCACAACAACCT---------------------GTGCA...........................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................ACAACAACCT---------------------GTGCACC---A------------ACAACCAC.................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ACCACAACAACCTGTG-------------------CACCA------ACAACC.27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................A------------------ACA---ACCACAACAACCTGT...............................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................CACAACAACCTGTGCACCA------ACAACCA............................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ACAACCACAACAACCTGTGCA..............................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ACAAC---CTGTGCACCAA---C------A.........................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AACCTGTGCACC---------AACAACCACAACAAC..........................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TACAACCTGTGCACC---------AACAACCAC................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................................................................................................................ACA---ACCACAACAACCTGTGCA............................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CAA---C------AACCACTACAACCTG---------------------------------------TGCACCAA............................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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......................................................................................................................................................................................................................................................................GCACC---A------------ACAACCACTACAACC..........................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................ACCACTACAACCTG---------------------------------------TGCACCAAC------AA---------CC........................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................A------ACAACCACAACAACCT---------------------G...............................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGTGCACCAA---C------AACCACTACAACCTG---------------------------------------TG..................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droEug1
AACTACAACCACAACAAC---ATGTGCTTCAA---C------------------------------AACAACAACGACGACTA-CCACAA--------CAACCACAACCACAA---------CTACAACGACAA------CCACAACTACAACAACAACCACA---ACTACAACGACAACCACAACTACAACGACAACCACTACTACATGTGCTCCA------ACAACAACAACGACAA---------------------CGACAACTACTA---CCACTACCA---------------CAACAAC---------AACAACTACAACTT-------------------------CAACGACAACCACAACCASizeHit CountTotal NormTotal
No Reads
droBia1
AGTTACGACCACCACAGC---CTGTGCTTCTG---A------------------------------CATAAGCACAAAAACAA-CCACAACATGCG--CCCCAGAAACTTCGA---------CTACAACAACATGCGCCCCA------------GCAACTACG---ACTAGTACAACCACTGAGGCTCCAACCACGACTACAACAACATGTACGCCA------ACCACAACGACTACAA------CAT------------GCGCCCC---AGC------CACTACTACTACAACAACCACTGAGGCTCCAAC---CACGACTACAACAACATGTA-------------------CGCCA---ACTACAACGASizeHit CountTotal NormTotal
No Reads
droTak1
AA--AAAACCACAACAAC---CTGTGTGCCAG---AAA------CTACAACTACCTC---------------------------------------TGCATCCGAGA---------------TCACAACAACTTGTGTGAAA------------------AGA---ACCACAACAACCTGTGTTCCAGAAACT------ACAACAACCTCTGTGCTC------GAGACCACAACAACCT---------------------GTGTTCC---AGA------------AACTACAACAACCTTTGTT-G---------AAAAACCACAACAACCTGTG-------------------TTCCA------GAAACTASizeHit CountTotal NormTotal
No Reads
droEle1
AACGACAACTACAACCAC---ATGTGCCCCAA---C------------------------------AACAACTACAACCACATG------------TGCCCCAACAACAACCA---------CCACCATAA---------CG------------ACGACAACT---ACCACAACCACTTGTGCCCCAACAACAACCACCACAACAACCACTACGACA------ACTACTACTACAACAA---------------------------------C------AACGACAACTACAACCACATGTGCCCCAAC------AACAACTACAACCACATGTG-------------------CCCCAACAACAACCACCASizeHit CountTotal NormTotal
No Reads
droRho1
AACGACAACGACAACCAC---TTGTGCCCCAA---C------------------------------AACCACGACAACCACAA-CTA-----------CAA---------------------CTAAGGCTCCAA------CT------------ACAACTACA---ACCACAACCACTTGTGCCCCAACAACAACGACAACCACAACCACTGAGGCT------C---------CAACTACAACTACAACCACAACCACTTGTGCCCC---AA------------CAACAACGACAAC------------------------CACCACAACCACTA-------------------CCACCACGACTACGACCASizeHit CountTotal NormTotal
No Reads
droFic1
GGCTCCAACCACAACAACGACTTGTACCCCAAAAGCAACGACAACTACAACCACTTGTGCACCAACAAC------------------------------------AACGACAA---------CCACAACAACTTGTGCCCCA------------ACAACGACGACAACCACAACAACTTGTGCCCCA---ACAACAACCACAACAACTTGTGCACCA------ACAACAACGACAACCA------------CAACGT---------CTTGTG---CGCCAACGACAACCACAACAGCATGTGGCCCAACAAC---TAA---G-------------ACAACCACAACATCCTGCCCTGACGCAGTGACAACAASizeHit CountTotal NormTotal
No Reads
droKik1
GACCACATCAACTAC------GAGTGCTCCGG---AAGCCACAACCAC------T---------------------------------------------CCAGAGATTACCA---------CCTTAGGTACAAGTGCTCCG------------GAGACTACG---ACCTCAACTACGAGTGCCCCAGAGACCACGACTTCGACGACCAGTGCTCCG------GAGACCACGA---CCTCGACGA------------CCAGTGCTCC---AGACACTACGACTACAACCTCAACTACTAGCGCTCCGTTGAC---CACAGTTCCAACCACCAAAG-------------------CTCCTGAAACCACAACTASizeHit CountTotal NormTotal
No Reads
droAna3
TACGACAAGCACCACATC---CTGTGCGCCTA---C------TACCACAACCACCTG---------------------------------------TGAGCCTACTACAACAA---------GCACCACATCCTGTGCGCCT------------------ACT---ACCACAACCACCTGTGAGCCTACTACGACAAGCACCACATCCTGTGCGCCT------ACTACCACAACCACCT---------------------GTGAGCC---------------TACTACCACAACAACCTGCGCGCC---------TACTACCACAACAACCTGTG-------------------AGCCTACCACAACAACCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................CTACAACAA---------GCACCACATCC...............................................................................................................................................................................................................................................2032.678071000
.................................................................................................GAGCCTACTACAACAA---------GCACCAC...................................................................................................................................................................................................................................................2322.505050000
...................................................................................................................................................................................................................GCGCCT------ACTACCACAACCACC......................................................................................................................................2192.00180180000
...................................................................................................................................................................................................................................................................................................AACAACCTGCGCGCC---------TACTACCACAAC.............................................2712.002011000
.........................GCGCCTA---C------TACCACAACCACC.............................................................................................................................................................................................................................................................................................................................2192.00180180000
........................................................................................................................................GCGCCT------------------ACT---ACCACAACCACC..................................................................................................................................................................................................2192.00180180000
................................................AACCACCTG---------------------------------------TGAGCCTACTACAAC.....................................................................................................................................................................................................................................................................2421.503030000
........................................................................................................CTACAACAA---------GCACCACATCCTGT............................................................................................................................................................................................................................................2331.334040000
........................................................................................................CTACAACAA---------GCACCACATCCT..............................................................................................................................................................................................................................................2131.334040000
...............................................................................................................................................................................................................................................................................................CCACAACAACCTGCGCGCC---------TACTACCAC................................................2811.001010000
........................................................................................................................................................................................................................................................................GCC---------------TACTACCACAACAACCTGC.......................................................................2211.001010000
...........................................................................................................................................................................................................................................................................................ACTACCACAACAACCTGCGCGCC---------T........................................................2411.001010000
...................................................................................................GCCTACTACAACAA---------GCACCACATCCT..............................................................................................................................................................................................................................................2621.002020000
..............................................................................................................................................................................................................................................................................................ACCACAACAACCTGCGCGC...................................................................1911.001010000
................................................AACCACCTG---------------------------------------TGAGCCTACTACAACAA---------GC........................................................................................................................................................................................................................................................2821.002020000
.................................................................................................GAGCCTACTACAACAA---------GCACCA....................................................................................................................................................................................................................................................2221.002020000
...................................................................................................GCCTACTACAACAA---------GCACCACATCC...............................................................................................................................................................................................................................................2521.002020000
.............................................................................................................................................................................................................................................................................................TACCACAACAACCTGCGCGC...................................................................2011.001001000
.......................................................................................................................................................................................................................................................................................................................................AACCTGTG-------------------AGCCTACCACAACAACCA2611.001010000
.................................................................................................................................................................................................................................................................................................ACAACAACCTGCGCGCC---------TACTACCACAAC.............................................2911.001010000
.....................................................................................................CTACTACAACAA---------GCACCACATCC...............................................................................................................................................................................................................................................2321.002020000
....................................................................................................................................................................................................................................................................................................................................AACAACCTGTG-------------------AGCCTACCACAACAAC..2711.001010000
......................................................................................................................................................................................................................................................................................................AACCTGCGCGCC---------TACTACCACAAC.............................................2411.001010000
........................................................................................................................................................................................................................................................................GCC---------------TACTACCACAACAACCTGCGC.....................................................................2411.001010000
............................................................................................................................................................................................CTACGACAAGCACCACATCC....................................................................................................................................................................2061.006060000
.................................................................................................................................................................................................................................................................................................ACAACAACCTGCGCGCC---------TAC......................................................2011.001010000
...........................................................................................................CAACAA---------GCACCACATCCTGT............................................................................................................................................................................................................................................2031.003030000
.....................................................................................................................................................................................................................................................................................................CAACCTGCGCGCC---------TACTACCACAAC.............................................2511.001010000
.................................................................................................GAGCCTACTACAACAA---------GC........................................................................................................................................................................................................................................................1821.002020000
...................................................................................................................................................................................................................................................................................................AACAACCTGCGCGCC---------TACTACC..................................................2211.001010000
................................................................................................................................................................................................................................................................................................................................CCACAACAACCTGTG-------------------AGCCTAC...........2211.001010000
........................................................................................................................................GCGCCT------------------ACT---ACCACAACCACCTGT...............................................................................................................................................................................................2490.898080000
................................................AACCACCTG---------------------------------------TGAGCCTACTAC........................................................................................................................................................................................................................................................................2190.898080000
.......................................................................................................................................................................................................................................AACCACCT---------------------GTGAGCC---------------TACTAC....................................................................................2190.898080000
...................................................................................................................................................................................................................GCGCCT------ACTACCACAACCACCT---------------------GT..............................................................................................................2490.898080000
.........................GCGCCTA---C------TACCACAACCACCTG---------------------------------------T...................................................................................................................................................................................................................................................................................2490.898080000
...........................................................................................................................................................................AACCACCTGTGAGCCTACTAC....................................................................................................................................................................................2190.898080000
.....................................................................................................................................................................................GAGCCTACTACGACAAGCACCAC........................................................................................................................................................................2360.835050000
......................................................................................................................................................................................AGCCTACTACGACAAGCACCACATCC....................................................................................................................................................................2660.674040000
............................................................................................................AACAA---------GCACCACATCCTGT............................................................................................................................................................................................................................................1930.672020000
..................................................................................................................................................................................................................................................................................................................................ACAACAACCTGTG-------------------AGCCC.............1830.672020000
..........................................................................................................ACAACAA---------GCACCACATCCTGT............................................................................................................................................................................................................................................2130.672020000
..........................................................................................................................................................................CAACCACCTGTGAGCCTACTAC....................................................................................................................................................................................2290.565050000
......................................................................................................................................................................................................................................CAACCACCT---------------------GTGAGCC---------------TACTAC....................................................................................2290.565050000
...............................................CAACCACCTG---------------------------------------TGAGCCTACTAC........................................................................................................................................................................................................................................................................2290.565050000
................................................................................................................................................................................................................................................................................................................................CCACAACAACCTGTG-------------------AGCC..............1920.501010000
...................................................................................................GCCTACTACAACAA---------GCACCACATC................................................................................................................................................................................................................................................2420.501010000
................................................AACCACCTG---------------------------------------TGAGCCTACTACAACA....................................................................................................................................................................................................................................................................2520.501010000
...................................................CACCTG---------------------------------------TGAGCCTACTACAACA....................................................................................................................................................................................................................................................................2220.501010000
............................................................................................................................................................................................................................................................................................................................ACTACCACAACAACCTGTG-------------------..................1920.501010000
..................................................................................................AGCCTACTACAACAA---------GCACCAC...................................................................................................................................................................................................................................................2220.501010000
..................................................CCACCTG---------------------------------------TGAGCCTACTACAACAA---------..........................................................................................................................................................................................................................................................2420.501010000
.....................................................................................................CTACTACAACAA---------GCACCACATC................................................................................................................................................................................................................................................2220.501010000
.........................................................................................................................................................................................CTACTACGACAAGCACCAC........................................................................................................................................................................1960.503030000
.......................................................TG---------------------------------------TGAGCCTACTACAACAA---------GCACCACATC................................................................................................................................................................................................................................................2920.501010000
.................................................................................................................................................................................................................................................................................................................................CACAACAACCTGTG-------------------AGCC..............1820.501010000
.....................................................................................................CTACTACAACAA---------GCACCACATCCT..............................................................................................................................................................................................................................................2420.501010000
.......................................................TG---------------------------------------TGAGCCTACTACAACA....................................................................................................................................................................................................................................................................1820.501010000
........................................................................................................................................................................................................................................................................GCC---------------TACTACCACAACAACCT.........................................................................2020.501010000
...................................................CACCTG---------------------------------------TGAGCCTACTACAACAA---------GC........................................................................................................................................................................................................................................................2520.501010000
...........................................................................................................................................................................AACCACCTGTGAGCCTACTACGAC.................................................................................................................................................................................2460.503030000
...............................................CAACCACCTG---------------------------------------TGAGCCTACTACAA......................................................................................................................................................................................................................................................................2420.501010000
................................................................................................TGAGCCTACTACAACAA---------GC........................................................................................................................................................................................................................................................1920.501010000
.......................................................TG---------------------------------------TGAGCCTACTACAACAA---------..........................................................................................................................................................................................................................................................1920.501010000
..................................................................................................................................................................................TGTGAGCCTACTACGACAAGC.............................................................................................................................................................................2160.503030000
.................................................................................................GAGCCTACTACAACAA---------GCACCACATCCC..............................................................................................................................................................................................................................................2820.501010000
.......................................................TG---------------------------------------TGAGCCTACTACAACAA---------GCACCAC...................................................................................................................................................................................................................................................2620.501010000
..................................................................................................AGCCTACTACAACAA---------GCACCA....................................................................................................................................................................................................................................................2120.501010000
....................................................ACCTG---------------------------------------TGAGCCTACTACAACAA---------GC........................................................................................................................................................................................................................................................2420.501010000
..................................................................................................AGCCTACTACAACAA---------GCACCACATCC...............................................................................................................................................................................................................................................2620.501010000
.....................................................................................................................................................................................GAGCCTACTACGACAAGCACCACATCC....................................................................................................................................................................2760.503030000
.......................................................TG---------------------------------------TGAGCCTACTACAACAA---------GC........................................................................................................................................................................................................................................................2120.501010000
.........................................................................................................................................................................................CTACTACGACAAGCACCACATCC....................................................................................................................................................................2360.503030000
.....................................................................................................CTACTACAACAA---------GCACCAC...................................................................................................................................................................................................................................................1920.501010000
.......................................................................................................ACTACAACAA---------GCACCACATCCTGTGC..........................................................................................................................................................................................................................................2620.501010000
....................................................ACCTG---------------------------------------TGAGCCTACTACAACA....................................................................................................................................................................................................................................................................2120.501010000
........................................................G---------------------------------------TGAGCCTACTACAACAA---------GCACC.....................................................................................................................................................................................................................................................2320.501010000
.................................................................................................GAGCCTACTACAACAA---------GCAC......................................................................................................................................................................................................................................................2020.501010000
.........................................................................................................................................................................................CTACTACGACAAGCACCACATCCTGT.................................................................................................................................................................2660.503030000
..................................................................................................AGCCTACTACAACAA---------GCACCACATCCTGT............................................................................................................................................................................................................................................2920.501010000
........................................................G---------------------------------------TGAGCCTACTACAACAA---------GCAC......................................................................................................................................................................................................................................................2220.501010000
...................................................CACCTG---------------------------------------TGAGCCTACTACAACAA---------G.........................................................................................................................................................................................................................................................2420.501010000
...............................................................................................................................................................................................................................................................................................................GCC---------TACTACCACAACAACCT........................................2020.501010000
............................................................................................................................................CT------------------ACT---ACCACAACCACCTGT...............................................................................................................................................................................................2090.444022000
............................................................................................................................................CT------------------ACT---ACCACAACCACCTGTGAGC...........................................................................................................................................................................................2490.444040000
................................................................................................................................................................................................................................CTACCACAACCACCT---------------------GTGAGC..........................................................................................................2190.444040000
...................................C------TACCACAACCACCTG---------------------------------------TGAGC...............................................................................................................................................................................................................................................................................2190.444040000
.......................................................................................................................................................................................................................CT------ACTACCACAACCACCT---------------------GTGAGC..........................................................................................................2490.444040000
..............CATC---CTGTGCGCCTA---C------TACCAC....................................................................................................................................................................................................................................................................................................................................2290.444040000
.............................CTA---C------TACCACAACCACCTG---------------------------------------TGAGC...............................................................................................................................................................................................................................................................................2490.444040000
...........................................................................................................................................................................................................CATCCTGTGCGCCT------ACTACCAC.............................................................................................................................................2290.444040000
................................................................................................................................CATCCTGTGCGCCT------------------ACT---ACCAC.........................................................................................................................................................................................................2290.444040000
.............................CTA---C------TACCACAACCACCTG---------------------------------------T...................................................................................................................................................................................................................................................................................2090.444022000
......................................................................................................................................GTGCGCCT------------------ACT---ACCACAACCACC..................................................................................................................................................................................................2390.444040000
.......................GTGCGCCTA---C------TACCACAACCACC.............................................................................................................................................................................................................................................................................................................................2390.444040000
.................................................................................................................................................................................................................GTGCGCCT------ACTACCACAACCACC......................................................................................................................................2390.444040000
.................................................................................................................................................................CT---ACCACAACCACCTGTGAGC...........................................................................................................................................................................................2190.444040000
.......................................................................................................................................................................................................................CT------ACTACCACAACCACCT---------------------GT..............................................................................................................2090.444022000
........................................................................................................CTACAACAA---------GCACCACATC................................................................................................................................................................................................................................................1930.331010000
.........................................................................................................................................CGCCT------------------ACT---ACCACAACCACC..................................................................................................................................................................................................2090.333030000
..........................................................................................................................................................................CAACCACCTGTGAGCCTACTACG...................................................................................................................................................................................2360.332011000
............................................................................................................................................................................................CTACGACAAGCACCACATC.....................................................................................................................................................................1960.332020000
.....................................................................................................................................................................................GAGCCTACTACGACAAGCACCA.........................................................................................................................................................................2260.332020000
...........................................................................................................................................................................AACCACCTGTGAGCCTACTACGACAAG..............................................................................................................................................................................2760.332020000
............................................................................................................................................................................................CTACGACAAGCACCACATCCTGTGCGC.............................................................................................................................................................2760.332020000
...........................................................................................................CAACAA---------GCACCACATCCTGTGC..........................................................................................................................................................................................................................................2230.331010000
............................................................................................................AACAA---------GCACCACATCCTGC............................................................................................................................................................................................................................................1930.331010000
..............................................................................................................................................................................CACCTGTGAGCCTACTACGACAAGC.............................................................................................................................................................................2560.332020000
...GACAAGCACCACATC---CTGT...........................................................................................................................................................................................................................................................................................................................................................1960.332020000
........................................................................................................CTACAACAA---------GCACCACATCCTGTGC..........................................................................................................................................................................................................................................2530.331010000
................................................................................................................................................................................................................................CTACCACAACCACCT---------------------GTGAGCC---------------..........................................................................................2290.333030000
.............................CTA---C------TACCACAACCACCTG---------------------------------------TG..................................................................................................................................................................................................................................................................................2190.333030000
.........................................................................................................................................CGCCT------------------ACT---ACCACAACCACCTGT...............................................................................................................................................................................................2390.333030000
..................................................................................................................................................................................TGTGAGCCTACTACGACAAGCAC...........................................................................................................................................................................2360.332020000
...........CCACATC---CTGTGCGCCTA---C------TACCAC....................................................................................................................................................................................................................................................................................................................................2590.333030000
..........................................................................................................................................................................CAACCACCTGTGAGCCTACT......................................................................................................................................................................................2090.333030000
................................................................................................................................................................................................GACAAGCACCACATCCTGT.................................................................................................................................................................1960.332020000
............................................................................................................................................CT------------------ACT---ACCACAACCACCTGTG..............................................................................................................................................................................................2190.333030000
..............CATC---CTGTGCGCCTA---C------TACCACAACCACC.............................................................................................................................................................................................................................................................................................................................2990.333030000
...........................................................................................................................................................................................ACTACGACAAGCACCACATCCTGC.................................................................................................................................................................2460.332020000
...............................................CAACCACCTG---------------------------------------TGAGCCTACT..........................................................................................................................................................................................................................................................................2090.333030000
.......................................................................................................................................................................................................................CT------ACTACCACAACCACCT---------------------GTG.............................................................................................................2190.333030000
....................................................................................................................................................................................TGAGCCTACTACGACAAGCACCAC........................................................................................................................................................................2460.332011000
..............................................................................................................................................................................................ACGACAAGCACCACATCCTGT.................................................................................................................................................................2160.332020000
.................................................................................................................................................................CT---ACCACAACCACCTGTGAGCC..........................................................................................................................................................................................2290.333030000
..........................................................................................................ACAACAA---------GCACCACATCCC..............................................................................................................................................................................................................................................1930.331010000
....................................................................................................................................................................................................................CGCCT------ACTACCACAACCACCT---------------------GT..............................................................................................................2390.333030000
................................................................................................................................CATCCTGTGCGCCT------------------ACT---ACCACAACCACC..................................................................................................................................................................................................2990.333030000
...........................................................................................................................................................................................ACTACGACAAGCACCACATC.....................................................................................................................................................................2060.332020000
..........................CGCCTA---C------TACCACAACCACCTG---------------------------------------T...................................................................................................................................................................................................................................................................................2390.333030000
....................................................................................................................................................................................................................CGCCT------ACTACCACAACCACC......................................................................................................................................2090.333030000
.............................................................................................................................CCACATCCTGTGCGCCT------------------ACT---ACCAC.........................................................................................................................................................................................................2590.333030000
..CGACAAGCACCACATC---CTGTG..........................................................................................................................................................................................................................................................................................................................................................2160.332011000
.ACGACAAGCACCACATC---CTGT...........................................................................................................................................................................................................................................................................................................................................................2160.332020000
...............................................................................................................................................................................................CGACAAGCACCACATCCTGT.................................................................................................................................................................2060.332020000
...................................................................................................................................................................................GTGAGCCTACTACGACAAGCAC...........................................................................................................................................................................2260.332020000
...........................................................................................................CAACAA---------GCACCACATCCTGTGCGCCT------------------....................................................................................................................................................................................................................2630.331010000
......................................................................................................................................................................................................................................CAACCACCT---------------------GTGAGCC---------------TACT......................................................................................2090.333030000
............................................................................................................................................................................................CTACGACAAGCACCACATCCTGT.................................................................................................................................................................2360.332020000
............................................................................................................AACAA---------GCACCACATCCTGTGCGCCT------------------AC..................................................................................................................................................................................................................2730.331010000
...........................................................................................................................................................................AACCACCTGTGAGCCTACTACGACAA...............................................................................................................................................................................2660.332020000
...............................................................................................................................................................................................CGACAAGCACCACATCCTGTG................................................................................................................................................................2160.332011000
........................................................................................................................................................................................................CCACATCCTGTGCGCCT------ACTACCAC.............................................................................................................................................2590.333030000
...........................................................................................................................................................................................................CATCCTGTGCGCCT------ACTACCACAACCACC......................................................................................................................................2990.333030000
...................................C------TACCACAACCACCTG---------------------------------------TGAGCC..............................................................................................................................................................................................................................................................................2290.333030000
.........................................................................................................TACAACAA---------GCACCACATCCTGTG...........................................................................................................................................................................................................................................2330.331010000
..............................................................................................................................................................................CACCTGTGAGCCTACTACGACA................................................................................................................................................................................2260.332020000
..........................CGCCTA---C------TACCACAACCACC.............................................................................................................................................................................................................................................................................................................................2090.333030000
........................................................................................................CTACAACAA---------GCACCACATCCTGC............................................................................................................................................................................................................................................2330.331010000
...........................................................................................................CAACAA---------GCACCACATCCT..............................................................................................................................................................................................................................................1830.331010000
.......................................................................................................................................................................................GCCTACTACGACAAGCACCACATCCT...................................................................................................................................................................2660.332020000
..CGACAAGCACCACATC---CTGT...........................................................................................................................................................................................................................................................................................................................................................2060.332020000
.....................................................................................................................................TGTGCGCCT------------------ACT---ACCACAACCACCTGT...............................................................................................................................................................................................2790.222020000
.............................................................................................................................CCACATCCTGTGCGCCT------------------ACT---ACC...........................................................................................................................................................................................................2390.222020000
.............................................CACAACCACCTG---------------------------------------TGAGCCTACTAC........................................................................................................................................................................................................................................................................2490.222020000
................................................................................................................................................................................................................TGTGCGCCT------ACTACCACAACCACC......................................................................................................................................2490.222020000
........................................................................................................................................................................CACAACCACCTGTGAGCC..........................................................................................................................................................................................1890.222020000
........................................................................................................................................GCGCCT------------------ACT---ACCACAACCACCT.................................................................................................................................................................................................2290.222020000
............................................................................................................................ACCACATCCTGTGCGCCT------------------ACT---ACCAC.........................................................................................................................................................................................................2690.222020000
............CACATC---CTGTGCGCCTA---C------TACCAC....................................................................................................................................................................................................................................................................................................................................2490.222020000
...............ATC---CTGTGCGCCTA---C------TACCA.....................................................................................................................................................................................................................................................................................................................................2090.222020000
............................................................................................................................................................................................................ATCCTGTGCGCCT------ACTACCA..............................................................................................................................................2090.222020000
.........................................................................................................................................................................................................CACATCCTGTGCGCCT------ACTACCAC.............................................................................................................................................2490.222020000
....................................................................................................................................................................................................................CGCCT------ACTACCACAACCACCC---------------------................................................................................................................2190.222020000
............................................................................................................................................................................................................ATCCTGTGCGCCT------ACTACC...............................................................................................................................................1990.222020000
......................TGTGCGCCTA---C------TACCACAACCACCTG---------------------------------------T...................................................................................................................................................................................................................................................................................2790.222020000
.....................................................................................................................................TGTGCGCCT------------------ACT---ACCACAACCACC..................................................................................................................................................................................................2490.222020000
.........CACCACATC---CTGTGCGCCTA---C------TACC......................................................................................................................................................................................................................................................................................................................................2590.222020000
............................................................................................................................................................................................................ATCCTGTGCGCCT------ACTACCAC.............................................................................................................................................2190.222020000
...........................................................................................................................CACCACATCCTGTGCGCCT------------------ACT---ACC...........................................................................................................................................................................................................2590.222020000
........................................................................................................................................................................................................CCACATCCTGTGCGCCT------ACTACC...............................................................................................................................................2390.222020000
.........................GCGCCTA---C------TACCACAACCACCT............................................................................................................................................................................................................................................................................................................................2290.222020000
.................................................................................................................................ATCCTGTGCGCCT------------------ACT---ACCAC.........................................................................................................................................................................................................2190.222020000
................................................................................................................................................................................................................TGTGCGCCT------ACTACCACAACCACCT---------------------GT..............................................................................................................2790.222020000
.......................................................................................................................................................................................................ACCACATCCTGTGCGCCT------ACTACCAC.............................................................................................................................................2690.222020000
.................................................................................................................................ATCCTGTGCGCCT------------------ACT---ACC...........................................................................................................................................................................................................1990.222020000
..........................CGCCTA---C------TACCACAACCACCTG---------------------------------------TGAGC...............................................................................................................................................................................................................................................................................2790.222020000
..............................................................................................................................CACATCCTGTGCGCCT------------------ACT---ACCAC.........................................................................................................................................................................................................2490.222020000
............................................................................................................................................................................................................ATCCTGTGCGCCT------ACTACCACAACCACC......................................................................................................................................2890.222011000
..........................................TACCACAACCACCTG---------------------------------------TGAGCC..............................................................................................................................................................................................................................................................................2190.222020000
....................................................................................................................................................................................................................................CACAACCACCT---------------------GTGAGCC---------------TACTAC....................................................................................2490.222020000
...............ATC---CTGTGCGCCTA---C------TACC......................................................................................................................................................................................................................................................................................................................................1990.222020000
...................................................................................................................................CCTGTGCGCCT------------------ACT---ACCAC.........................................................................................................................................................................................................1990.222011000
...............ATC---CTGTGCGCCTA---C------TACCACAACCACC.............................................................................................................................................................................................................................................................................................................................2890.222011000
.............................................CACAACCACCTG---------------------------------------TGAGCC..............................................................................................................................................................................................................................................................................1890.222020000
...................................................................................................................................................................................................................GCGCCT------ACTACCACAACCACCT---------------------................................................................................................................2290.222020000
.................................................................................................................................................................................................................................TACCACAACCACCT---------------------GTGAGCC---------------..........................................................................................2190.222020000
........................................................................................................................................................................CACAACCACCTGTGAGCCTACTAC....................................................................................................................................................................................2490.222020000
.........................................................................................................................................CGCCT------------------ACT---ACCACAACCACCTGTGAGC...........................................................................................................................................................................................2790.222020000
...........CCACATC---CTGTGCGCCTA---C------TACC......................................................................................................................................................................................................................................................................................................................................2390.222020000
.........................................................................................................................................CGCCT------------------ACT---ACCACAACCACCC.................................................................................................................................................................................................2190.222020000
.................................................................................................................................ATCCTGTGCGCCT------------------ACT---ACCA..........................................................................................................................................................................................................2090.222020000
..........................CGCCTA---C------TACCACAACCACCC............................................................................................................................................................................................................................................................................................................................2190.222020000
....................................................................................................................................................................................................................CGCCT------ACTACCACAACCACCT---------------------GTGAGC..........................................................................................................2790.222020000
....................................................................................................................................................................................................................................CACAACCACCT---------------------GTGAGCC---------------..........................................................................................1890.222020000
.................................................................................................................................ATCCTGTGCGCCT------------------ACT---ACCACAACCACC..................................................................................................................................................................................................2890.222011000
..................................................................................................................................................................T---ACCACAACCACCTGTGAGCC..........................................................................................................................................................................................2190.222020000
..........ACCACATC---CTGTGCGCCTA---C------TACCAC....................................................................................................................................................................................................................................................................................................................................2690.222020000
..............................................................................................................................................................................................................CCTGTGCGCCT------ACTACCAC.............................................................................................................................................1990.222011000
......................TGTGCGCCTA---C------TACCACAACCACC.............................................................................................................................................................................................................................................................................................................................2490.222020000
.................C---CTGTGCGCCTA---C------TACCAC....................................................................................................................................................................................................................................................................................................................................1990.222011000
...............ATC---CTGTGCGCCTA---C------TACCAC....................................................................................................................................................................................................................................................................................................................................2190.222020000
......................................................................................................................................................................................................CACCACATCCTGTGCGCCT------ACTACC...............................................................................................................................................2590.222020000
................................................AACCACCTG---------------------------------------TGAGCCTACC..........................................................................................................................................................................................................................................................................19100.202020000
...........................................................................................................................................................................AACCACCTGTGAGCCTACC......................................................................................................................................................................................19100.202020000
.......................................................................................................................................................................................................................................AACCACCT---------------------GTGAGCC---------------TACC......................................................................................19100.202020000
.............................................................................................................................................................................................TACGACAAGCACCACATCCTGT.................................................................................................................................................................2260.171001000
.ACGACAAGCACCACATC---CT.............................................................................................................................................................................................................................................................................................................................................................1960.171010000
.........................................................................................................................................................................................CTACTACGACAAGCACCACATCCT...................................................................................................................................................................2460.171010000
................................................................................................................................................................................................GACAAGCACCACATCCTGTGCGCCC------.....................................................................................................................................................2560.171010000
...................................................................................................................................................................................GTGAGCCTACTACGACAAGCACC..........................................................................................................................................................................2360.171010000
.......................................................................................................................................................................................GCCTACTACGACAAGCACCA.........................................................................................................................................................................2060.171010000
...GACAAGCACCACATC---CTGTGCGC.......................................................................................................................................................................................................................................................................................................................................................2360.171010000
...GACAAGCACCACATC---CTGTGCGCCC.....................................................................................................................................................................................................................................................................................................................................................2560.171010000
........................................................................................................................................................................CACAACCACCTGTGAGCCTACTACGAC.................................................................................................................................................................................2760.171010000
...............................................................................................................................................................................ACCTGTGAGCCTACTACGAC.................................................................................................................................................................................2060.171010000
.......................................................................................................................................................................................GCCTACTACGACAAGCAC...........................................................................................................................................................................1860.171010000
.......................................................................................................................................................................................GCCTACTACGACAAGCACCACATCCTGT.................................................................................................................................................................2860.171010000
...........................................................................................................................................................................................ACTACGACAAGCACCACATCCC...................................................................................................................................................................2260.171010000
.........................................................................................................................................................................................CTACTACGACAAGCACCACATCCTGTG................................................................................................................................................................2760.171010000
TACGACAAGCACCACATC---CTGTGCGC.......................................................................................................................................................................................................................................................................................................................................................2660.171010000
.........................................................................................................................................................................................CTACTACGACAAGCACCACATCA....................................................................................................................................................................2360.171010000
TACGACAAGCACCACATC---C..............................................................................................................................................................................................................................................................................................................................................................1960.171010000
...........................................................................................................................................................................................ACTACGACAAGCACCACATCCTGTGCGCC............................................................................................................................................................2960.171010000
................................................................................................................................................................................................GACAAGCACCACATCCTGTGC...............................................................................................................................................................2160.171010000
................................................................................................................................................................................................GACAAGCACCACATCCTGTGCGCC............................................................................................................................................................2460.171010000
.......................................................................................................................................................................................GCCTACTACGACAAGCACCAC........................................................................................................................................................................2160.171010000
.........................................................................................................................................................................................CTACTACGACAAGCACCACATCCTGC.................................................................................................................................................................2660.171010000
....................................................................................................................................................................................TGAGCCTACTACGACAAGCACCACATCC....................................................................................................................................................................2860.171010000
............................................................................................................................................................................ACCACCTGTGAGCCTACTACGAC.................................................................................................................................................................................2360.171010000
...GACAAGCACCACATC---CTGTGC.........................................................................................................................................................................................................................................................................................................................................................2160.171010000
.........................................................................................................................................................................................CTACTACGACAAGCACCACATC.....................................................................................................................................................................2260.171010000
..CGACAAGCACCACATC---CTGC...........................................................................................................................................................................................................................................................................................................................................................2060.171010000
......................................................................................................................................................................................AGCCTACTACGACAAGCACC..........................................................................................................................................................................2060.171010000
..........................................................................................................................................................................CAACCACCTGTGAGCCTACTACGACAAG..............................................................................................................................................................................2860.171010000
............................................................................................................................................................................ACCACCTGTGAGCCTACTACGACAA...............................................................................................................................................................................2560.171010000
.............................................................................................................................................................................................TACGACAAGCACCACATCCTGTGCGC.............................................................................................................................................................2660.171010000
..............................................................................................................................................................................CACCTGTGAGCCTACTACGA..................................................................................................................................................................................2060.171010000
.ACGACAAGCACCACATC---CTGTGCGC.......................................................................................................................................................................................................................................................................................................................................................2560.171010000
..............................................................................................................................................................................................ACGACAAGCACCACATCCTGTG................................................................................................................................................................2260.171010000
......................................................................................................................................................................................AGCCTACTACGACAAGCACCA.........................................................................................................................................................................2160.171010000
.........................................................................................................................................................................................CTACTACGACAAGCACCACATCCTGTGC...............................................................................................................................................................2860.171010000
...................................................................................................................................................................................GTGAGCCTACTACGACAA...............................................................................................................................................................................1860.171001000
.............................................................................................................................................................................................TACGACAAGCACCACATCCT...................................................................................................................................................................2060.171010000
......................................................................................................................................................................................AGCCTACTACGACAAGCACCAC........................................................................................................................................................................2260.171010000
.ACGACAAGCACCACATC---CTGTG..........................................................................................................................................................................................................................................................................................................................................................2260.171010000
...................................................................................................................................................................................GTGAGCCTACTACGACAAGCACCAC........................................................................................................................................................................2560.171010000
TACGACAAGCACCACATC---CT.............................................................................................................................................................................................................................................................................................................................................................2060.171010000
..............................................................................................................................................................................................ACGACAAGCACCACATCCTGTGCGC.............................................................................................................................................................2560.171010000
...............................................................................................................................................................................................CGACAAGCACCACATCCTGC.................................................................................................................................................................2060.171010000
.....................................................................................................................................................................................GAGCCTACTACGACAAGCACCACATC.....................................................................................................................................................................2660.171010000
droBip1
AACCACTACCACAACAAC---CACTACTACAA---C------------------------------AACGACCACAACAACCA-CGACAA--------CAACCACAACGACAA---------CTACAACACCTTGTGCCCCT------------ACAACGACTTCCACTACAACGACAACCACTACC---ACGACCACCACAACAACTACTACAACA------ACCACGACAACAACCACGACAACAA---CCACGA---CAACAAC---CAC------TACCACAACTACAACACCGTGTGCCCCTACAAC---GAC---T-------------TCCACCACAACGACAACCACTACAACAACTACCACAASizeHit CountTotal NormTotal
No Reads
dp5
AACGACAACTACAACTAC---TTGCTCGACAA---C------------------------------AACAACCACGACGACAA-CCACTA--------CAACAACAACCACGACTACAACAACCACGACTACAACCACCACT------------ACTACAACC---ACCACTACTACAACCACACCAACAACGACAACTACAACTACTTGCTCGACA------ACAACAACCA------------------------------------------------------CGACGACAACCACTACAACAACAAC---CACGACTACAACAACCACGA-------------------CAACAACAACCACTACTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................TGCTCGACA------ACAACAACCA------------------------------------------------------CGACGAC..............................................................................2660.1710000000001
.......................................................................................................................................................................................................................CA------ACAACAACCA------------------------------------------------------CGACGAC..............................................................................1960.1710000000001
.............................CAA---C------------------------------AACAACCACGACGAC...................................................................................................................................................................................................................................................................................................1960.1710000000001
......................TGCTCGACAA---C------------------------------AACAACCACGACGAC...................................................................................................................................................................................................................................................................................................2660.1710000000001
droPer2
AACAACCACGACGACAAC---CACTACTACAA---C------------------------------AACCACTACTACAACCA-CCA-----------CGA---------------------CAACAACAACCA------CT---------ACAACTACAACC---ACGACAACGACAACCACGACAACAACCACTACTACAACGACTTGGGCGACA------TCAACCACCA---CTACAACAA------------------CAACCACGA---CAACAACTACTACTACAACGACTTGCACGCCAGAAAC---AACCACTACAACAGCAACCA-------------------CTTGCGACAGTACAACTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AATTACAACAACAACAAC---AAAAATTACAA---C------------------------------AACAACAACAACAACAA------------------ACATAATTACAA------CAACAACAACAACAACAACAAAA---------------ATTACA---ACAACAACAACAACAACAACAAAAATTACAACAACAACAAAAAT------------TACAACAACAACAAC------------------------------------------AATTACAACAACAACAA---CAAAAAT---------TACAACAACAACAA-------------------------CAACAAAAATTACAACAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............CAAC---AAAAATTACAA---C------------------------------AACA..............................................................................................................................................................................................................................................................................................................20200.05101000
.....................................................................................................................................................................................................................................................................................................CAA---CAAAAAT---------TACAACAACA...............................................20200.05101000
droVir3
TACAACAACAACAAC------CACTACAAAGG---CAACTACTGCTACAACAACCAC---------------------------------------T------T------GCACCACACCAACAACAACCACTTGCACCACA---------------------------ACAACAACCACTACTACAACAACAACAACTACTACAACAACCACCACA------ACTACAACAACAACCT---------------------GCACCAC---AC------------CCACAACAACCACTTGCACAAC---------------AACAACAACCACTA-------------------CGACAACAACCACCACTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................CAACAACAACAACTACTACAACAA...................................................................................................................................................................24120.081001000000000000000000000000000000000000000000000000000000000000
droMoj3
CACCACAACAACAACAAC---TACAACAAAAA---C------------------------------AACGACAACAAC------------------TACGCCCAAAACAACCACA---ACAACAACGACTACCTGCACCACA------------------ACA---ACGACAACCACAACAAAAACAACGACAACGACAACAACCACTTGCACCACA------ACAACAACAACAA------------------------CTACAAC---AAA---------AACAACGACAACAAC---TACGCCCAAAACAACCACAACAACAACAA-------------------------CCACTTGCACCACACCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................ACGACAACAAC---TACGCCCA................................................................1930.331000010
...................................................................ACGACAACAAC------------------TACGCCCA............................................................................................................................................................................................................................................................................1930.331000010
......................................................................................................................................................................................................................................................................................................................ACAACCACAACAACAACAA-------------------------..................19200.051000010
droGri2
AACGACACCAACAACAAC---ACCTACAACAA---C------------------------------ACCAACAACAACACCAA-CAACAA--------CACCTACAACGACGC---------CAACAACAACATCTACAACA---------------------------ACACCAACGACAACACCAACAACAACACCTACAACAACACCTACAACA------ACACCTACAACAACAC---------------------CT-CACC---AAC------ACCTACAACAACACCAACAACAACACC---------TACAACAACACCAA-------------------------CAACAACACCTACAACCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:11 PM