ID:

dya_24

 Coordinate:

2L:10159938-10160000 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.7 -20.4

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

GTTATTTATTGAAGAGCATTATGCTTCGAAGTTTTAAAAAAATTATATATTTAAGTAGTGGATACAAAAGGCGATTGATATAAAAATGTCGCATTGTATGGCCTACTTAACTAGCTGATTTTGTATCCCAACTTACATCAATTATTTTCACATGCTGTTATTG

***********************************...(((((((..((.((((((((...((((((...(((((............))))).))))))...)))))))).))..))))))).....************************************ 		Read size # Mismatch Hit Count Total Norm Total M056

embryo

 V046

embryo

 M043

female body

 V058

head

 M026

head

 V052

head
..................................................TTAAGTAGTGGATACAAAAGGCGA......................................................................................... 24 0 1 24940.00 24940 22498 2417 18 5 0 2
..........................................................................................GCATTGTATGGCCTACTTAACT................................................... 22 0 1 3854.00 3854 3794 59 0 0 1 0
..................................................TGAAGTAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 2745.00 2745 2745 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCG.......................................................................................... 23 0 1 1165.00 1165 1035 127 2 1 0 0
..........................................................................................GCATTGTATGGCCTACTTAACC................................................... 22 1 1 937.00 937 937 0 0 0 0 0
...................................................TAAGTAGTGGATACAAAAGGCGA......................................................................................... 23 0 1 474.00 474 428 44 2 0 0 0
..................................................TTATGTAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 386.00 386 385 0 0 1 0 0
..................................................TTAAGTAGTGGATACAAAAAGCGA......................................................................................... 24 1 1 295.00 295 8 286 0 1 0 0
..................................................TTAAGTAGTGGATACAAAAGGC........................................................................................... 22 0 1 293.00 293 280 13 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGG............................................................................................ 21 0 1 194.00 194 178 16 0 0 0 0
..........................................................................................GGATTGTATGGCCTACTTAACT................................................... 22 1 1 185.00 185 185 0 0 0 0 0
...................................................TAAGTAGTGGATACAAAAGGCGAT........................................................................................ 24 0 1 160.00 160 146 13 0 1 0 0
..........................................................................................GCATTGTATGGCCTACTTAAC.................................................... 21 0 1 156.00 156 155 1 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCGG......................................................................................... 24 1 1 140.00 140 29 111 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGCG.......................................................................................... 23 1 1 133.00 133 133 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGAGA......................................................................................... 24 1 1 133.00 133 129 4 0 0 0 0
..................................................TTAAGGAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 124.00 124 119 5 0 0 0 0
..................................................TTAAGTAGTGGATAAAAAAGGCGA......................................................................................... 24 1 1 123.00 123 92 31 0 0 0 0
..................................................TTAAGTAGCGGATACAAAAGGCGA......................................................................................... 24 1 1 103.00 103 100 3 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCGAT........................................................................................ 25 0 1 94.00 94 88 6 0 0 0 0
.................................................CTTAAGTAGTGGATACAAAAGGCGA......................................................................................... 25 1 1 85.00 85 83 2 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCGC......................................................................................... 24 1 1 83.00 83 14 69 0 0 0 0
..................................................GTAAGTAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 78.00 78 78 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 67.00 67 63 4 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCTA......................................................................................... 24 1 1 64.00 64 64 0 0 0 0 0
..................................................TGATGTAGTGGATACAAAAGGCGA......................................................................................... 24 2 2 59.50 119 119 0 0 0 0 0
..................................................TTAAGTAGTGGATACCAAAGGCGA......................................................................................... 24 1 1 57.00 57 0 56 0 1 0 0
..........................................................................................GCAGTGTATGGCCTACTTAACT................................................... 22 1 1 54.00 54 54 0 0 0 0 0
..................................................TTAAGTAGTTGATACAAAAGGCGA......................................................................................... 24 1 1 54.00 54 53 1 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGGGA......................................................................................... 24 1 1 53.00 53 10 43 0 0 0 0
..................................................ATAAGTAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 48.00 48 48 0 0 0 0 0
...................................................TAAGTAGTGGATACAAAAGGCG.......................................................................................... 22 0 1 48.00 48 39 9 0 0 0 0
..................................................TTAAGTATTGGATACAAAAGGCGA......................................................................................... 24 1 1 40.00 40 40 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCGAC........................................................................................ 25 1 1 40.00 40 37 3 0 0 0 0
..................................................TTAAGTAGTCGATACAAAAGGCGA......................................................................................... 24 1 1 39.00 39 38 1 0 0 0 0
..........................................................................................GCACTGTATGGCCTACTTAACT................................................... 22 1 1 39.00 39 39 0 0 0 0 0
..........................................................................................GGATTGTATGGCCTACTTAACC................................................... 22 2 1 37.00 37 37 0 0 0 0 0
..........................................................................................GTATTGTATGGCCTACTTAACT................................................... 22 1 1 34.00 34 34 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAAGCG.......................................................................................... 23 1 1 33.00 33 1 32 0 0 0 0
..................................................TTAAGTAGTGGATACAAAATGCGA......................................................................................... 24 1 1 31.00 31 29 2 0 0 0 0
..................................................TTAAGTAGTGCATACAAAAGGCGA......................................................................................... 24 1 1 31.00 31 30 1 0 0 0 0
.........................................................................................CGCATTGTATGGCCTACTTAAC.................................................... 22 0 1 30.00 30 29 1 0 0 0 0
..................................................TCAAGTAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 30.00 30 27 3 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCAA......................................................................................... 24 1 1 30.00 30 30 0 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGC........................................................................................... 22 1 1 28.00 28 28 0 0 0 0 0
..................................................TTAAGTAGTAGATACAAAAGGCGA......................................................................................... 24 1 1 28.00 28 23 5 0 0 0 0
..................................................TTATGTAGTGGATACAAAAGGCG.......................................................................................... 23 1 1 28.00 28 28 0 0 0 0 0
...................................................TAAGTAGTGGATACAAAAGGCGAC........................................................................................ 24 1 1 28.00 28 28 0 0 0 0 0
..........................................................................................GCAATGTATGGCCTACTTAACT................................................... 22 1 1 28.00 28 28 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCGT......................................................................................... 24 1 1 27.00 27 17 10 0 0 0 0
..................................................TAAAGTAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 27.00 27 27 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGTCGA......................................................................................... 24 1 1 26.00 26 26 0 0 0 0 0
..................................................TTAAGTAGTGAATACAAAAGGCGA......................................................................................... 24 1 1 26.00 26 25 1 0 0 0 0
..................................................TTAAGTAGTGTATACAAAAGGCGA......................................................................................... 24 1 1 24.00 24 24 0 0 0 0 0
..................................................TTAAGTACTGGATACAAAAGGCGA......................................................................................... 24 1 1 23.00 23 23 0 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGG............................................................................................ 21 1 1 22.00 22 22 0 0 0 0 0
...................................................TAAGTAGTGGATACAAAAGGC........................................................................................... 21 0 1 22.00 22 20 2 0 0 0 0
..................................................TTAAGCAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 22.00 22 20 2 0 0 0 0
..................................................TTAAGTAGTGGATACTAAAGGCGA......................................................................................... 24 1 1 22.00 22 21 1 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCGAA........................................................................................ 25 1 1 22.00 22 22 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAGGGCGA......................................................................................... 24 1 1 21.00 21 19 2 0 0 0 0
..........................................................................................GCATTGTCTGGCCTACTTAACT................................................... 22 1 1 19.00 19 19 0 0 0 0 0
..................................................TTAAGTAGTGGACACAAAAGGCGA......................................................................................... 24 1 1 19.00 19 14 5 0 0 0 0
..........................................................................................GCATTGTATGGCATACTTAACT................................................... 22 1 1 18.00 18 18 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAAGCGG......................................................................................... 24 2 1 17.00 17 0 17 0 0 0 0
..................................................TTAAGTAGTGGATACACAAGGCGA......................................................................................... 24 1 1 17.00 17 3 14 0 0 0 0
............................................................................................ATTGTATGGCCTACTTAACT................................................... 20 0 1 17.00 17 17 0 0 0 0 0
..........................................................................................GCCTTGTATGGCCTACTTAACT................................................... 22 1 1 16.00 16 16 0 0 0 0 0
....................................................AAGTAGTGGATACAAAAGGCGA......................................................................................... 22 0 1 16.00 16 15 1 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAG............................................................................................. 20 0 1 16.00 16 15 1 0 0 0 0
..................................................TTAGGTAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 15.00 15 12 3 0 0 0 0
...........................................................................................CATTGTATGGCCTACTTAACT................................................... 21 0 1 15.00 15 13 2 0 0 0 0
..................................................TTAAGTAGTGGATACAAAACGCGA......................................................................................... 24 1 1 15.00 15 2 13 0 0 0 0
..................................................TGAAGTAGTGGATAAAAAAGGCGA......................................................................................... 24 2 1 15.00 15 15 0 0 0 0 0
..........................................................................................GCATTGTATGGCCTACTTAACTT.................................................. 23 1 1 15.00 15 15 0 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGAGA......................................................................................... 24 2 1 15.00 15 15 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAGAGGCGA......................................................................................... 24 1 1 15.00 15 13 2 0 0 0 0
..................................................TTAAGTAATGGATACAAAAGGCGA......................................................................................... 24 1 1 15.00 15 15 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGTGA......................................................................................... 24 1 1 14.00 14 11 3 0 0 0 0
..................................................TTAATTAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 14.00 14 14 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAAGC........................................................................................... 22 1 1 14.00 14 2 12 0 0 0 0
..................................................TTAAGTAGTGGGTACAAAAGGCGA......................................................................................... 24 1 1 13.00 13 8 5 0 0 0 0
..................................................TTCAGTAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 13.00 13 12 1 0 0 0 0
..........................................................................................GCACTGTATGGCCTACTTAACC................................................... 22 2 1 13.00 13 13 0 0 0 0 0
..................................................TTAAGTGGTGGATACAAAAGGCGA......................................................................................... 24 1 1 13.00 13 11 2 0 0 0 0
..................................................TTAAGTAGGGGATACAAAAGGCGA......................................................................................... 24 1 1 13.00 13 13 0 0 0 0 0
..........................................................................................GCATTTTATGGCCTACTTAACT................................................... 22 1 1 12.00 12 12 0 0 0 0 0
..........................................................................................GCAGTGTATGGCCTACTTAACC................................................... 22 2 1 12.00 12 12 0 0 0 0 0
..................................................TTATGTAGTGGATACAAAAGGC........................................................................................... 22 1 1 12.00 12 12 0 0 0 0 0
...................................................TAAGTAGTGGATACAAAAGGCGATT....................................................................................... 25 0 1 12.00 12 12 0 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGCGAT........................................................................................ 25 1 1 12.00 12 12 0 0 0 0 0
..................................................TTAAGTAGTGGCTACAAAAGGCGA......................................................................................... 24 1 1 12.00 12 10 2 0 0 0 0
..........................................................................................TCATTGTATGGCCTACTTAACT................................................... 22 1 1 12.00 12 12 0 0 0 0 0
..................................................TTGAGTAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 12.00 12 9 3 0 0 0 0
..........................................................................................GCAATGTATGGCCTACTTAACC................................................... 22 2 1 12.00 12 12 0 0 0 0 0
..................................................TTAAGTAGTGGATACAGAAGGCGA......................................................................................... 24 1 1 12.00 12 10 2 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGCGG......................................................................................... 24 2 1 12.00 12 12 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCCA......................................................................................... 24 1 1 11.00 11 5 5 0 1 0 0
..................................................TTAAGAAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 11.00 11 10 1 0 0 0 0
.........................................................................................CTCATTGTATGGCCTACTTAAC.................................................... 22 1 1 10.00 10 10 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCC.......................................................................................... 23 1 1 10.00 10 10 0 0 0 0 0
..................................................TTAAGTAGAGGATACAAAAGGCGA......................................................................................... 24 1 1 10.00 10 9 1 0 0 0 0
..................................................TGAAGTACTGGATACAAAAGGCGA......................................................................................... 24 2 1 9.00 9 9 0 0 0 0 0
..................................................TTAAGTAGTGGATACAATAGGCGA......................................................................................... 24 1 1 9.00 9 9 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAATGGCGA......................................................................................... 24 1 1 9.00 9 9 0 0 0 0 0
..................................................TTAAGTAGTGGATGCAAAAGGCGA......................................................................................... 24 1 1 9.00 9 6 3 0 0 0 0
..................................................TTAAGTAGTGGATAAAAAAAGCGA......................................................................................... 24 2 1 9.00 9 0 9 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAAGGGA......................................................................................... 24 2 1 9.00 9 0 9 0 0 0 0
..................................................TTAAGTAGTGGATAAAAAAGGCG.......................................................................................... 23 1 1 8.00 8 6 2 0 0 0 0
..........................................................................................GGATTGTATGGCCTACTTAAC.................................................... 21 1 1 8.00 8 8 0 0 0 0 0
......................................................GTAGTGGATACAAAAGGCGA......................................................................................... 20 0 1 8.00 8 7 0 0 1 0 0
..................................................TTAAGTAGTGGATATAAAAGGCGA......................................................................................... 24 1 1 8.00 8 5 3 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGGGG......................................................................................... 24 2 1 8.00 8 0 8 0 0 0 0
..........................................................................................GTATTGTATGGCCTACTTAACC................................................... 22 2 1 7.00 7 7 0 0 0 0 0
.................................................CGTAAGTAGTGGATACAAAAGGCGA......................................................................................... 25 2 1 7.00 7 7 0 0 0 0 0
..........................................................................................ACATTGTATGGCCTACTTAACT................................................... 22 1 1 7.00 7 7 0 0 0 0 0
..................................................TTAAGTAGTGGATACCAAAGGCGG......................................................................................... 24 2 1 7.00 7 0 7 0 0 0 0
..........................................................................................GCATTGTATGGCCTCCTTAACT................................................... 22 1 1 7.00 7 7 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAAAGGCG.......................................................................................... 23 1 1 7.00 7 7 0 0 0 0 0
..................................................TTAAGTAGTGGATACAACAGGCGA......................................................................................... 24 1 1 7.00 7 0 7 0 0 0 0
.........................................................................................CGCATTGTATGGCCTACTTAACT................................................... 23 0 1 7.00 7 6 0 0 0 1 0
..................................................TTAAGTAGTGGATAAAAAATGCGA......................................................................................... 24 2 1 7.00 7 6 1 0 0 0 0
..................................................ATAAGTAGTGGATACAAAAGGCG.......................................................................................... 23 1 1 7.00 7 7 0 0 0 0 0
..................................................TTAAGTAGCGGATACAAAAGGCG.......................................................................................... 23 1 1 7.00 7 6 1 0 0 0 0
..................................................TGATGTAGTGGATACAAAAGGCG.......................................................................................... 23 2 2 6.50 13 13 0 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGCAA......................................................................................... 24 2 1 6.00 6 6 0 0 0 0 0
..........................................................................................GCATTGTATGGCCTACTTAACA................................................... 22 1 1 6.00 6 6 0 0 0 0 0
..................................................TTAAGTAGTGGATACACAAGGCGC......................................................................................... 24 2 1 6.00 6 0 6 0 0 0 0
..........................................................................................GCATTGGATGGCCTACTTAACT................................................... 22 1 1 6.00 6 6 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCA.......................................................................................... 23 1 1 6.00 6 6 0 0 0 0 0
..........................................................................................GCATTGTATGGCCTATTTAACC................................................... 22 2 1 6.00 6 6 0 0 0 0 0
........................................................AGTGGATACAAAAGGCGA......................................................................................... 18 0 1 6.00 6 4 2 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCGATT....................................................................................... 26 0 1 6.00 6 6 0 0 0 0 0
..........................................................................................GCCTTGTATGGCCTACTTAACC................................................... 22 2 1 6.00 6 6 0 0 0 0 0
..........................................................................................GCATTGTATGGCCTACTTATCT................................................... 22 1 1 6.00 6 6 0 0 0 0 0
...........................................................................................CATTGTATGGCCTACTTAACC................................................... 21 1 1 6.00 6 6 0 0 0 0 0
...................................................TAAGTAGTGGATACAAAAAGCGA......................................................................................... 23 1 1 6.00 6 0 6 0 0 0 0
...................................................TTAGTAGTGGATACAAAAGGCGA......................................................................................... 23 1 1 6.00 6 6 0 0 0 0 0
..................................................TTAAGTAGTGGATACGAAAGGCGA......................................................................................... 24 1 1 6.00 6 5 1 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGACGA......................................................................................... 24 1 1 6.00 6 4 2 0 0 0 0
..................................................TTAAGTAGTGGATACCAAAGGCGC......................................................................................... 24 2 1 5.00 5 0 5 0 0 0 0
..................................................TTATGTAGCGGATACAAAAGGCGA......................................................................................... 24 2 1 5.00 5 5 0 0 0 0 0
..................................................TGAAGTAGTGGATACTAAAGGCGA......................................................................................... 24 2 1 5.00 5 5 0 0 0 0 0
..................................................TGAAGTAGTGGATACAAATGGCGA......................................................................................... 24 2 1 5.00 5 5 0 0 0 0 0
..................................................TTAAGTAGTGGAAACAAAAGGCGA......................................................................................... 24 1 1 5.00 5 5 0 0 0 0 0
..................................................CGAAGTAGTGGATACAAAAGGCGA......................................................................................... 24 2 1 5.00 5 5 0 0 0 0 0
..................................................TTAAGTAGTGGATACACAAAGCGA......................................................................................... 24 2 1 5.00 5 0 5 0 0 0 0
..................................................TGAAGGAGTGGATACAAAAGGCGA......................................................................................... 24 2 1 5.00 5 5 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGAC........................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0
..........................................................................................GCATTGTATGGCCCACTTAACT................................................... 22 1 1 5.00 5 5 0 0 0 0 0
.......................................................TAGTGGATACAAAAGGCGA......................................................................................... 19 0 1 5.00 5 5 0 0 0 0 0
..........................................................................................GCATTGTATGCCCTACTTAACT................................................... 22 1 1 5.00 5 5 0 0 0 0 0
...................................................TAAGTAGTGGATACAAAAGGCGG......................................................................................... 23 1 1 5.00 5 0 5 0 0 0 0
..................................................TTAAGTAGTGGATACCAAAAGCGA......................................................................................... 24 2 1 5.00 5 0 5 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAAGCGC......................................................................................... 24 2 1 5.00 5 0 5 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGGGA......................................................................................... 24 2 1 4.00 4 4 0 0 0 0 0
..................................................TTATGTAGTGGATACAAAAGG............................................................................................ 21 1 1 4.00 4 4 0 0 0 0 0
..........................................................................................GCATTTTATGGCCTACTTAACC................................................... 22 2 2 4.00 8 8 0 0 0 0 0
..................................................TTAAATAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 4.00 4 4 0 0 0 0 0
..........................................................................................GCGTTGTATGGCCTACTTAACT................................................... 22 1 1 4.00 4 4 0 0 0 0 0
..........................................................................................GCATTGTATAGCCTACTTAACT................................................... 22 1 1 4.00 4 4 0 0 0 0 0
...................................................TAAGTAGTGGATACCAAAGGCGA......................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..................................................TGAAGTAGCGGATACAAAAGGCGA......................................................................................... 24 2 1 4.00 4 4 0 0 0 0 0
...................................................TAAGTAGTCGATACAAAAGGCGA......................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
...............................................ATCTTAAGTAGTGGATACAAAAGGCGA......................................................................................... 27 3 1 4.00 4 4 0 0 0 0 0
..........................................................................................GCATTGTATGGCCTACTTAGCT................................................... 22 1 1 4.00 4 2 2 0 0 0 0
..................................................TTAAGGAGTGGATACAAAAGGCG.......................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..................................................TGAAGTATTGGATACAAAAGGCGA......................................................................................... 24 2 1 4.00 4 4 0 0 0 0 0
..................................................TTAAGTAGTGGATAGAAAAGGCGA......................................................................................... 24 1 1 4.00 4 2 2 0 0 0 0
..........................................................................................GCATTGTATGGACTACTTAACT................................................... 22 1 1 4.00 4 4 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAATGGAGA......................................................................................... 24 2 1 4.00 4 4 0 0 0 0 0
..................................................TGAAGTAGTTGATACAAAAGGCGA......................................................................................... 24 2 1 4.00 4 4 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAAG............................................................................................ 21 1 1 4.00 4 1 3 0 0 0 0
..........................................................................................GCATTGTATTGCCTACTTAACT................................................... 22 1 1 4.00 4 4 0 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGCGAA........................................................................................ 25 2 1 4.00 4 4 0 0 0 0 0
..................................................TGAAGTAGTAGATACAAAAGGCGA......................................................................................... 24 2 1 4.00 4 4 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGAG.......................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..................................................TGAAGTAGTGGATAAAAAAGGCGG......................................................................................... 24 3 1 3.00 3 3 0 0 0 0 0
........................................................ATTGGATACAAAAGGCGA......................................................................................... 18 1 1 3.00 3 3 0 0 0 0 0
.................................................CTTAAGTAGTGGATACAAAAGGCG.......................................................................................... 24 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................GCATTGGATGGCCTACTTAACC................................................... 22 2 1 3.00 3 3 0 0 0 0 0
..................................................TTAAGTAGTGGATACCACAGGCGA......................................................................................... 24 2 1 3.00 3 0 3 0 0 0 0
..........................................................................................GCATTGTATGACCTACTTAACT................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................GCATTGTATGGCCTACTTAGCC................................................... 22 2 1 3.00 3 3 0 0 0 0 0
..................................................TTAAGTAGTGGATACATAAGGCGA......................................................................................... 24 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................CCATTGTATGGCCTACTTAACT................................................... 22 1 1 3.00 3 3 0 0 0 0 0
...................................................TAAGTAGTGGATACAAAAAGC........................................................................................... 21 1 1 3.00 3 0 3 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCT.......................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
........................................................................................TCGCATTGTATGGCCTACTTAACT................................................... 24 0 1 3.00 3 3 0 0 0 0 0
..........................................................................................GCATCGTATGGCCTACTTAACT................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAACGGCGA......................................................................................... 24 1 1 3.00 3 0 3 0 0 0 0
..................................................TGAAGTAGTGGATACAAAATGCGA......................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0
..................................................TGAAGTAGTCGATACAAAAGGCGA......................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0
...................................................TAAGTATTGGATACAAAAGGCGA......................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
..................................................TTAAGTAGTGGATAAAAAAGGGGA......................................................................................... 24 2 1 3.00 3 0 3 0 0 0 0
..................................................TTAAGTAGCGGATACAAAAGGAGA......................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0
..........................................................................................ACATTGTATGGCCTACTTAACC................................................... 22 2 1 3.00 3 3 0 0 0 0 0
...................................................TAAGTAGAGGATACAAAAGGCGA......................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
...............................................ATATTAAGTAGTGGATACAAAAGGCGA......................................................................................... 27 3 1 3.00 3 3 0 0 0 0 0
..................................................TGAAGTAGTGGACACAAAAGGCGA......................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0
..................................................TTAAGTACTGGATACAAAAGGCG.......................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
...................................................TAAGTAGTGGATACAAAAAGCG.......................................................................................... 22 1 1 3.00 3 0 3 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGTCGA......................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0
..................................................TGAAGTAGTGTATACAAAAGGCGA......................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0
...................................................TGAGTAGTGGATACAAAAGGCG.......................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAATGCGG......................................................................................... 24 2 1 3.00 3 0 3 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGATA......................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0
..................................................TTAAGTAGTGGATACTAAAGG............................................................................................ 21 1 1 3.00 3 3 0 0 0 0 0
....................................................AAGTAGTGGATACAAAAGGCG.......................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0
...................................................TAAGTAGTGGATACAAAAGG............................................................................................ 20 0 1 3.00 3 3 0 0 0 0 0
...................................................TAAGCAGTGGATACAAAAGGCGAT........................................................................................ 24 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................GCATTGTACGGCCTACTTAACT................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGTAGA......................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAACGCGC......................................................................................... 24 2 1 3.00 3 0 3 0 0 0 0
..........................................................................................GCATTGTATGGCCTACTTGACT................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..................................................TTAAGTAGTGGATACCAAAAGCGG......................................................................................... 24 3 1 3.00 3 0 3 0 0 0 0
..........................................................................................GCATCGTATGGCCTACTTAACC................................................... 22 2 1 3.00 3 3 0 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGG........................................................................................... 22 2 1 2.00 2 1 1 0 0 0 0
..........................................................................................GCATTGTCTGGCCTACTTAACA................................................... 22 2 1 2.00 2 2 0 0 0 0 0
......................................................................................TGTCGCATTGTATGGCCTACTTAACT................................................... 26 0 1 2.00 2 0 2 0 0 0 0
..........................................................................................GCACTGTATGGCCTACTTAAC.................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...................................................GAAGTAGTGGATACAAAAGGCGA......................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................GCATTGTATGGACTCCTTAACT................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGGTA......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTTGATACAAAAGGCGG......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAG............................................................................................. 20 1 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAAGCGAT........................................................................................ 25 1 1 2.00 2 1 1 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGTATA......................................................................................... 24 3 1 2.00 2 2 0 0 0 0 0
....................................................AAGTAGTGGATACAAAAGG............................................................................................ 19 0 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGAGACAAAAGGCGA......................................................................................... 24 1 1 2.00 2 1 1 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGCGATT....................................................................................... 26 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................GCAATGTATGGCCTACTTAAC.................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATATAAAAGGCGG......................................................................................... 24 2 1 2.00 2 0 2 0 0 0 0
................................................TCTTAAGTAGTGGATACAAAAGGCGA......................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................GCATTGTATGGCATACTTAAC.................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TGAAGTAGTGAATACAAAAGGCGA......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................GCATTGTATGGTCTACTTAACC................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................TTATGTAGTGGATGCAAAAGGCGA......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................GCATTGTATGGCCTATTTAACT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTGTTGGATACAAAAGGCGA......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGT........................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
...................................................................................AAATGTCGCATTGTATGGC............................................................. 19 0 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCGAG........................................................................................ 25 1 1 2.00 2 2 0 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGCGAC........................................................................................ 25 2 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGTTACAAAAGGCGA......................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0
...................................................TAATTAGTGGATACAAAAGGCGA......................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATACCAAAGGCG.......................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0
..................................................TTAAGGAGTGGATAAAAAAGGCGA......................................................................................... 24 2 1 2.00 2 1 1 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGCGC......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
...................................................TAAGTAGTGGATACAAAAGGCGATA....................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................GCAGTGTCTGGCCTACTTAACT................................................... 22 2 1 2.00 2 2 0 0 0 0 0
...................................................TTAATAGTGGATACAAAAGGCGA......................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTCGTGGATACAAAAGGCGA......................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0
.........................................................................................CGCATTGTATGGCCTACTTAACC................................................... 23 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................GCATAGTATGGCCTACTTAACT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................CCATTGTATGGCCTACTTAACC................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................TTATGTAGCGGATACAAAAGGCG.......................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
..................................................TTATGTAGTGGATAAAAAAGGCGA......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATAAAAAAGGCGG......................................................................................... 24 2 1 2.00 2 1 1 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGG........................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
..................................................TGAAGTAGAGGATACAAAAGGCGA......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGAGC......................................................................................... 24 2 1 2.00 2 1 1 0 0 0 0
............................................................................................ATTGTATGGCCTACTTAACC................................................... 20 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................GCATTGTCTGGCCTACTTAACC................................................... 22 2 1 2.00 2 2 0 0 0 0 0
.................................................................................AAAAATGTCGCATTGTATGGCCTACT........................................................ 26 0 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGGAGTGGATACAAAAAGCGT......................................................................................... 24 3 1 2.00 2 0 2 0 0 0 0
..................................................TGAGGTAGTGGATACAAAAGGCGA......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCCT......................................................................................... 24 2 1 2.00 2 0 2 0 0 0 0
..................................................TTAAGGAGTGGATACAAAAGGC........................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TTTAGTAGTGGATACAAAAGGCGA......................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGCATACAAAAGG............................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAACGCCA......................................................................................... 24 2 1 2.00 2 0 2 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGCTA......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................TTATGTAGTGGATACAAAAGGCGG......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................GCATTGTATGGCCTACTGAACT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.........................................................................................CGAATTGTATGGCCTACTTAACC................................................... 23 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TCATTGTATGGCCTACTTAACC................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATACACAAGGCG.......................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0
..................................................TGAAGTAGTGGATACAATAGGCGA......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................GCATTGCATGGCCTACTTAACT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
................................................CCTTAAGTAGTGGATACAAAAGGCGA......................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................GCATTGTATGGCCTACTAAACT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGTGA......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATAAAAAAGGCGT......................................................................................... 24 2 1 2.00 2 1 1 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGCGT......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAAACGA......................................................................................... 24 2 1 2.00 2 0 1 0 1 0 0
....................................................AACTAGTGGATACAAAAGGCGA......................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.....................................................ATTAGTGGATACAAAAGGCGA......................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................GCATTGTATGGCATACTTAACC................................................... 22 2 1 2.00 2 2 0 0 0 0 0
...................................................TAAGTAGTTGATACAAAAGGCGA......................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATAAAAAAGGC........................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...................................................TAAGTAGTGGCTACAAAAGGCGA......................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.........................................................................................CTCATTGTATGGCCTACTTAACT................................................... 23 1 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATACCAAAGGC........................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGGGT......................................................................................... 24 2 1 2.00 2 0 2 0 0 0 0
..................................................TGAAGTAGTGGATACAAAAGGAG.......................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
..................................................TAAAGTAGTGGATACAAAAGGCG.......................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................GCATTGTATGGACTACTTAACC................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................TTAAGTAGTGGATACAAAAAGCTA......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................TTAAGTAGTGGATACAAAACGCGG......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................TTAAGTAGTGGATATAAAAGGCG.......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0

Anti-sense strand reads

CAATAAATAACTTCTCGTAATACGAAGCTTCAAAATTTTTTTAATATATAAATTCATCACCTATGTTTTCCGCTAACTATATTTTTACAGCGTAACATACCGGATGAATTGATCGACTAAAACATAGGGTTGAATGTAGTTAATAAAAGTGTACGACAATAAC

************************************...(((((((..((.((((((((...((((((...(((((............))))).))))))...)))))))).))..))))))).....*********************************** 		Read size # Mismatch Hit Count Total Norm Total M056

embryo
........................................................................................AGCGTAACATAGGTGATGAATT..................................................... 22 3 1 1.00 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droYak3 2L:10159888-10160050 - dya_24 confident GTTAT-TTATT--GA-AGAGCATT--A-------------------TGCTT-------------------------CGAAGTTTTAA--------AAAAATTATATATTTAAGTAGTGGATACAAAAGGCGATT-GATATAAAAA----TGTCGCATTGTATGGCCTACTTAACTAGCTGATTTTGTATCCCAAC-TTAC------------------------------------------------------------------------------------------------------------------------------------ATCAATTATTTTCAC-----------------ATGC---TGTTAT-------TG
droEre2 scaffold_4929:11719020-11719221 + der_145 confident GTTCT-ATATT--AA---------------------------T----------------------------------------TGAT--------CAAAATTATATATCTAAGTAGTGGATACAAACGGCGATTTGGTATAAAAA----TGTCGCATTGTATGACCTGCTTAACTAGCTGATTTTGTATCCCAAC-GTACAAAGAAG-GC----CAACAG-----------------------------------------------------------------------TGAA----ATACATTCTTTTAAAACAATATTTTACC-TTT--------C--TTACCTTGCTGAGCATACGAGTATGT---TGCTAT-------TG
droSec2 scaffold_3:14337-14595 - dse_11 confident GTGAT-ATAT-GT----------------------CAGA------GTATT---GTCGGAATAAATATAATAATAATCGGAAATATTT--------AGAAATTATATATTTAAGTAGTGGATACAAAAGGCGATTTGATATAAAAG----TATCGCATTGTATGGCCTACTTAACTAGCTGATTTTGTATTCCAAC-ATAAAA----T-GC----TAAATATTACTTATAATTTT------------------------GT----GAGCTAGGATAAAGTACAAAAGAATTTTGAAAACTACACAATCTTTT---------TTTTACG-TTCCCTTGTTTT--TTTCCAAGTTGA--------------------------------
droSim2 2l:13334040-13334298 - dsi-mir-1002 Known_mirbase GTGAT-ATAT-GT----------------------CAGA------GTATT---GTCGGAATAAATATAATAATAATCGGAAATATTT--------AGAAATTATATATTTAAGTAGTGGATACAAAAGGCGATTTGATATAAAAG----TATCGCATTGTATGGCCTACTTAACTAGCTGATTTTGTATTCCAAC-ATAAAA----T-GC----TAAATATTACTTATAATTTT------------------------GT----GAGCTAGGATAAAGTACAAAAGAATTTTGAAAACTACACAATCTTTT---------TTTTACG-TTCCCTTGTTTT--TTTCCAAGTTGA--------------------------------
dm3 chr2L:13747459-13747730 - dme-mir-1002 Known_mirbase GTGAT-A-A-T--GCAAGAGTATT--G------------TAT----------------------------------CGGAATTAATT--------AGAAATTATATATTTAAGTAGTGGATACAAAGGGCGATTTGATATAAAAG----TGTCGCATTGTATGACCTACTTAACTAGCTGATTTTGTATCCCAAC-ATAATA----G-GT----TAAAAATTAATTCGAATTTT------------------------GT----GAGCTGGGATAAAGTACCAAAGAATTTTGAAAACTGCACATTCTTTTAAGACAAAATTTTACT-TTCCCTTGTTTTTTTTTCCAAATTGAG------AATTTGT---TGCCATTG-AAATCG
droEug1 scf7180000409452:319626-319717 - AAT-------------------------------------------------------------------------------TTTAC--------AAAAATCATATACTTAAGTAGTGGATACAAATTGCGATTTTAA--AAT-AT---ACTCGCATTGTATGGCCTACTTAGTTAGTTGATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302408:2583543-2583669 + GTAAT-A------GA-ACAATTTC--A-------------------ATAT---TTTA----------------------AAATATTTAGAATTTAGAAAATCATTTGTTTAAGTAGTGCATACAAAAGGCGATTTGCTATCA-AAC---GTTCGCATTGTATGCCCTACTTAACTAGTTGGTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414072:20310-20436 + GTAAA-T---T--GGAAAATTGT-----------------TT----------------------------------TTGAAATTTCA--------AAAAATCATACATTTAAGTAGTGGATACAAAAGGCGATTTGCTAATAAAAT---GTTCGCATTGTATGGCCTACTTAACTAACTGATTTTTTTTAACAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491338:1356961-1357129 - TAAAA-T-ACA--ATAAA-AGATT--A-------------------TGTTTTGTTTA-----------------------------A--------AAAAATCATGTATTTAAGTAGTGGATACAAAAGGCGATTTACAAAATAAAT---GTTCGCATTGTATGCCCTACTTAACTAGCAGGTTTTTCCAAGCAACAACAACT----TAATTGTTTTAGAAT-----------TTATA-----------------------------------------------------------------------------------------------TTCGATCTTATTT-----------------------------------------
droRho1 scf7180000780107:332606-332722 + GTAGA-TTAAT--AA-CTAAAATT--C-------------------TGTTA---TAA-----------------------------A--------AAAAATCATATGTTTAAGTAGTGGATACAAATGGCGACTTGCAAACGAAAT---GTTCGCATTGTATGTCCTACTTAAGTAGCTGATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453925:244781-244927 + TTAT--A-C-A--AGAAAAGTGTT--T-------------------TATTT-------------------------TTAACATATTA--------AAAAATCATACGTTTAAGTAGTGGATACAAAAGGCGATTTAT-ATAAAAAA---GTTCGCATTGTATGTCCTACTTAAGTGGCTGATTTTTTCAAGCAAC-ATCAAA----AAATTGT-----------TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302236:232130-232252 + CTGAC-CTAAA--ATAAGGACAT---ACA----------TAT-----CTGTTAATTA-----------------------------A--------GAAAATCGTATGTTTAAGTAGTGGATACAA-CGGCGATTGAACACAATAAT---CTTCGCAGTGTGTTACCTACTTAATTAGTCGATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12943:1815255-1815489 - dan_30 confident A---------------------------------------------------------------------------------------------------TCATGTGTTTAAGTAGGCAATACAT-GGGCGACTAAATAAAAT-AT---ACTCGCAATGTATAGCCTACATAACTAGTTGATTTTTGCAAGCATCCATTACA----A-AT----TAA-------ATACAATTTTA-AGTTGAAGTGATTATTGTTATTGAAATCCAGCTACCGT----TAAGAAAAAGTCTTGAATATTACCCTTACAAAT---------ATCTCAGTTTATCTCGATTGTATTTGT-----------------ATGGAAATGGCATTCCGATACG
droBip1 scf7180000396728:1424316-1424589 + AATAT-CTTCC--AA-ACAATATT--A-------------------TCTTC---TTA----------------------ATATACAA----C---TTAAATCATGTGTTTAAGTAGGCAATACAT-GGGCGATTCATTA------C---ATTCGCAATGTATGGCTTACATAACTAGTTGATTTTTGAAGTCATCCATTCCA----AAGTTAA-----------TTTCTATCTTATATGTGAAGTGTGTATTGTTATTGAAATGAAGCTATCGT----TAACGTAAGGTCTCGAATATTACCCCTACAAAT---------ATCTCAGTTTATCTCGATTTTATTTGT-----------------ATGGAAATGGCATTCCGATTCG
dp5 4_group1:1722904-1723014 + dps-mir-1002 Known_mirbase GAGTT-ATC-AAT----------------------AGG----CAGGTCCT---CTCA-----------------------------A--------AATAATCGGGCACCTAAGTAGTTGATACAA-GGGCGATAATGTAAAAGAAC---TTTCGCATTGTGTGACCTACTTAAATGCTCGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_5:3483479-3483589 - dpe_57 confident GAGTT-ATC-AAT----------------------AGG----CAGGTCCT---CTCA-----------------------------A--------AATAATCGGGCACCTAAGTAGTTGATACAA-GGGCGATAATGTAAAAGAAC---TTTCGCATTGTGTGACCTACTTAAATGCCCGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004585:545417-545543 + dwi_25 confident AGAAA-GTATT--GAAAAAGTGT---TCATT----TGA---TCTG-----------------------------------GTCATTG--------AAAAATGTTACACTTAAGTAGTTAATACAA-TGGCGATTCGT-ATTCCATTGTACATCGCATTGTGTGAGTTACTTTGTTGAGAGATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12723:5043895-5044020 - dvi-mir-1002 Known_mirbase GACAAAC---T--AAAAAA-TTTAAATCATTGCTAAGG----CT--TGCTG---CAA-----------------------------T--------GAAAATTGAACGCTTAAGTAGTTAATACAA-GGGCGAGTTTTTT--CTTG----CATCGCATTGTGTGACCTACTTAAATGACAAATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
GTTAT-TTATT--GA-AGAGCATT--A-------------------TGCTT-------------------------CGAAGTTTTAA--------AAAAATTATATATTTAAGTAGTGGATACAAAAGGCGATT-GATATAAAAA----TGTCGCATTGTATGGCCTACTTAACTAGCTGATTTTGTATCCCAAC-TTAC------------------------------------------------------------------------------------------------------------------------------------ATCAATTATTTTCAC-----------------ATGC---TGTTAT-------TGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................................................................................TTAAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................24124940.00249400182249824172500000
.........................................................................................................................................................GCATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................2213854.003854103794590000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................................................................................................2311165.0011650210351270100000
.........................................................................................................................................................GCATTGTATGGCCTACTTAACC...................................................................................................................................................................................................................221937.009370093700000000
.............................................................................................................TAAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................231474.0047402428440000000
............................................................................................................TTAAGTAGTGGATACAAAAGGC................................................................................................................................................................................................................................................................221293.0029300280130000000
............................................................................................................TTAAGTAGTGGATACAAAAGG.................................................................................................................................................................................................................................................................211194.0019400178160000000
.............................................................................................................TAAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................................................................................................241160.0016000146130100000
.........................................................................................................................................................GCATTGTATGGCCTACTTAAC....................................................................................................................................................................................................................211156.001560015510000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGG..............................................................................................................................................................................................................................................................241140.0014000291110000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................................................................................................25194.0094008860000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGC..............................................................................................................................................................................................................................................................24183.00830014690000000
.............................................................................................................TAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................................................................................................22148.0048003990000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGAC.............................................................................................................................................................................................................................................................25140.0040003730000000
........................................................................................................................................................CGCATTGTATGGCCTACTTAAC....................................................................................................................................................................................................................22130.0030002910000000
.............................................................................................................TAAGTAGTGGATACAAAAGGCGAC.............................................................................................................................................................................................................................................................24128.0028002800000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGT..............................................................................................................................................................................................................................................................24127.00270017100000000
.............................................................................................................TAAGTAGTGGATACAAAAGGC................................................................................................................................................................................................................................................................21122.0022002020000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGAA.............................................................................................................................................................................................................................................................25122.0022002200000000
...........................................................................................................................................................ATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................20117.0017001700000000
..............................................................................................................AAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................22116.0016001510000000
............................................................................................................TTAAGTAGTGGATACAAAAG..................................................................................................................................................................................................................................................................20116.0016001510000000
..........................................................................................................................................................CATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................21115.0015001320000000
.........................................................................................................................................................GCATTGTATGGCCTACTTAACTT..................................................................................................................................................................................................................23115.0015001500000000
.............................................................................................................TAAGTAGTGGATACAAAAGGCGATT-...........................................................................................................................................................................................................................................................25112.0012001200000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCC...............................................................................................................................................................................................................................................................23110.0010001000000000
................................................................................................................GTAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................2018.00800700100000
........................................................................................................................................................CGCATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................2317.00710600000000
.........................................................................................................................................................GCATTGTATGGCCTACTTAACA...................................................................................................................................................................................................................2216.00600600000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCA...............................................................................................................................................................................................................................................................2316.00600600000000
..................................................................................................................AGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................1816.00600420000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGATT-...........................................................................................................................................................................................................................................................2616.00600600000000
..........................................................................................................................................................CATTGTATGGCCTACTTAACC...................................................................................................................................................................................................................2116.00600600000000
.................................................................................................................TAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................1915.00500500000000
.............................................................................................................TAAGTAGTGGATACAAAAGGCGG..............................................................................................................................................................................................................................................................2315.00500050000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCT...............................................................................................................................................................................................................................................................2313.00300300000000
.......................................................................................................................................................TCGCATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................2413.00300300000000
..............................................................................................................AAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................................................................................................2113.00300300000000
.............................................................................................................TAAGTAGTGGATACAAAAGG.................................................................................................................................................................................................................................................................2013.00300300000000
.....................................................................................................................................................TGTCGCATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................2612.00200020000000
..............................................................................................................AAGTAGTGGATACAAAAGG.................................................................................................................................................................................................................................................................1912.00200200000000
..............................................................................................................................................AAA----TGTCGCATTGTATGGC.............................................................................................................................................................................................................................1912.00200200000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGAG.............................................................................................................................................................................................................................................................2512.00200200000000
.............................................................................................................TAAGTAGTGGATACAAAAGGCGATA-...........................................................................................................................................................................................................................................................2512.00200200000000
........................................................................................................................................................CGCATTGTATGGCCTACTTAACC...................................................................................................................................................................................................................2312.00200200000000
............................................................................................................TTAAGTAGTGGATACAAAAGGG................................................................................................................................................................................................................................................................2212.00200110000000
...........................................................................................................................................................ATTGTATGGCCTACTTAACC...................................................................................................................................................................................................................2012.00200200000000
............................................................................................................................................AAAAA----TGTCGCATTGTATGGCCTACT........................................................................................................................................................................................................................2612.00200200000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCCT..............................................................................................................................................................................................................................................................2412.00200020000000
droEre2
GTTCT-ATATT--AA---------------------------T----------------------------------------TGAT--------CAAAATTATATATCTAAGTAGTGGATACAAACGGCGATTTGGTATAAAAA----TGTCGCATTGTATGACCTGCTTAACTAGCTGATTTTGTATCCCAAC-GTACAAAGAAG-GC----CAACAG-----------------------------------------------------------------------TGAA----ATACATTCTTTTAAAACAATATTTTACC-TTT--------C--TTACCTTGCTGAGCATACGAGTATGT---TGCTAT-------TGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
............................................................................................................CTAAGTAGTGGATACAAACGGCGA..............................................................................................................................................................................................................................................................2411431.00143115310420235010
.........................................................................................................................................................GCATTGTATGACCTGCTTAACT...................................................................................................................................................................................................................221327.0032719296012000
............................................................................................................CTAAGTAGTGGATACAAACGGCG...............................................................................................................................................................................................................................................................231131.001312062049000
............................................................................................................CTAAGTAGTGGATACAAACGGC................................................................................................................................................................................................................................................................221102.00102378020010
..........................................................................................................................................................CATTGTATGACCTGCTTAACT...................................................................................................................................................................................................................21162.006235009000
.........................................................................................................................................................GCATTGTATGACCTGCTTAACC...................................................................................................................................................................................................................22148.004804800000
.............................................................................................................TAAGTAGTGGATACAAACGGCGAT.............................................................................................................................................................................................................................................................24147.0047136010000
............................................................................................................CTAAGTAGTGGATACAAACGGCGG..............................................................................................................................................................................................................................................................24130.003012027000
............................................................................................................CTAAGTAGTGGATACAAACGGCGAT.............................................................................................................................................................................................................................................................25129.002932303000
.............................................................................................................TAAGTAGTGGATACAAACGGCGA..............................................................................................................................................................................................................................................................23118.001810701000
............................................................................................................CTAAGTAGTGGATACAAACGG.................................................................................................................................................................................................................................................................21112.00123702000
............................................................................................................CTAAGTAGTGGATACAAACGGCGC..............................................................................................................................................................................................................................................................2419.0090306000
.........................................................................................................................................................GCATTGTATGACCTGCTTAAC....................................................................................................................................................................................................................2118.0080701000
............................................................................................................CTAAGTAGTGGATACAAACGGCGAC.............................................................................................................................................................................................................................................................2518.0080404000
.............................................................................................................TAAGTAGTGGATACAAACGGCGAC.............................................................................................................................................................................................................................................................2417.0070700000
........................................................................................................................................................CGCATTGTATGACCTGCTTAACT...................................................................................................................................................................................................................2316.0060501000
..........................................................................................................................................................CATTGTATGACCTGCTTAACC...................................................................................................................................................................................................................2115.0050500000
............................................................................................................CTAAGTAGTGGATACAAAC...................................................................................................................................................................................................................................................................1914.0040301000
.............................................................................................................TAAGTAGTGGATACAAACGGCG...............................................................................................................................................................................................................................................................2213.0030201000
............................................................................................................CTAAGTAGTGGATACAAACGGCGT..............................................................................................................................................................................................................................................................2413.0031101000
...........................................................................................................................................................ATTGTATGACCTGCTTAACT...................................................................................................................................................................................................................2013.0031200000
............................................................................................................CTAAGTAGTGGATACAAACGGCGATT............................................................................................................................................................................................................................................................2612.0020101000
............................................................................................................CTAAGTAGTGGATACAAACGGCC...............................................................................................................................................................................................................................................................2312.0020002000
.............................................................................................................TAAGTAGTGGATACAAACGGC................................................................................................................................................................................................................................................................2112.0020101000
............................................................................................................CTAAGTAGTGGATACAAACGGCGAA.............................................................................................................................................................................................................................................................2512.0020200000
..........................................................................................................................................................CATTGTATGACCTGCTTAACTT..................................................................................................................................................................................................................2211.0010100000
..........................................................................................................................................................CATTGTATGACCTGCTTAAC....................................................................................................................................................................................................................2011.0010100000
............................................................................................................CTAAGTAGTGGATACAAACGA.................................................................................................................................................................................................................................................................2111.0011000000
........................................................................................................................................................CGCATTGTATGACCTGCTTAAC....................................................................................................................................................................................................................2211.0010100000
..............................................................................................................AAGTAGTGGATACAAACGGCGA..............................................................................................................................................................................................................................................................2211.0011000000
.........................................................................................................................................................GCATTGTATGACCTGCTTAA.....................................................................................................................................................................................................................2011.0010001000
.............................................................................................................TAAGTAGTGGATACAAACGGCGATT............................................................................................................................................................................................................................................................2511.0010001000
.........................................................................................................................................................GCATTGTATGACCTGCTTAAT....................................................................................................................................................................................................................2111.0010001000
............................................................................................................CTAAGTAGTGGATACAAACGCGA...............................................................................................................................................................................................................................................................2311.0011000000
..........................................................................................................................................................CATTGTATGACCTGCTTAACG...................................................................................................................................................................................................................2111.0011000000
.........................................................................................................................................................GCATTGTATGACCTGCTTAACA...................................................................................................................................................................................................................2211.0010100000
............................................................................................................CTAAGTAGTGGATACAAACGGCGAGA............................................................................................................................................................................................................................................................2611.0010100000
............................................................................................................CTAAGTAGTGGATACAAACGT.................................................................................................................................................................................................................................................................2111.0010001000
droSec2
GTGAT-ATAT-GT----------------------CAGA------GTATT---GTCGGAATAAATATAATAATAATCGGAAATATTT--------AGAAATTATATATTTAAGTAGTGGATACAAAAGGCGATTTGATATAAAAG----TATCGCATTGTATGGCCTACTTAACTAGCTGATTTTGTATTCCAAC-ATAAAA----T-GC----TAAATATTACTTATAATTTT------------------------GT----GAGCTAGGATAAAGTACAAAAGAATTTTGAAAACTACACAATCTTTT---------TTTTACG-TTCCCTTGTTTT--TTTCCAAGTTGA--------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................TTAAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................24129096.00290969922892669
............................................................................................................TTAAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................................................................................................2512710.00271011026927
............................................................................................................TTAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................................................................................................2312196.0021965021838
.............................................................................................................TAAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................................................................................................2411998.0019985019894
.............................................................................................................TAAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................231460.004601404451
............................................................................................................TTAAGTAGTGGATACAAAAGGC................................................................................................................................................................................................................................................................221370.00370003682
............................................................................................................TTAAGTAGTGGATACAAAAGG.................................................................................................................................................................................................................................................................211245.00245002441
.............................................................................................................TAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................................................................................................22199.009900981
............................................................................................................TTAAGTAGTGGATACAAAAGGCGAA.............................................................................................................................................................................................................................................................25196.009600960
.............................................................................................................TAAGTAGTGGATACAAAAGGCGATT............................................................................................................................................................................................................................................................25183.008300830
............................................................................................................TTAAGTAGTGGATACAAAAGGCGG..............................................................................................................................................................................................................................................................24179.007910780
............................................................................................................TTAAGTAGTGGATACAAAAGGCGATT............................................................................................................................................................................................................................................................26174.007400740
.............................................................................................................TAAGTAGTGGATACAAAAGGCGATA............................................................................................................................................................................................................................................................25163.006300630
.............................................................................................................TAAGTAGTGGATACAAAAGGC................................................................................................................................................................................................................................................................21162.006200611
............................................................................................................TTAAGTAGTGGATACAAAAGGCGC..............................................................................................................................................................................................................................................................24151.005100510
.........................................................................................................................................................GCATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................22135.003540310
..............................................................................................................AAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................22130.003000300
............................................................................................................TTAAGTAGTGGATACAAAAGGCGATA............................................................................................................................................................................................................................................................26129.002900290
............................................................................................................TTAAGTAGTGGATACAAAAGGCGT..............................................................................................................................................................................................................................................................24124.002400240
............................................................................................................TTAAGTAGTGGATACAAAA...................................................................................................................................................................................................................................................................19122.002200220
............................................................................................................TTAAGTAGTGGATACAAAAG..................................................................................................................................................................................................................................................................20120.002000200
............................................................................................................TTAAGTAGTGGATACAAAAGGCA...............................................................................................................................................................................................................................................................23117.001700170
..............................................................................................................AAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................................................................................................23115.001500150
............................................................................................................TTAAGTAGTGGATACAAA....................................................................................................................................................................................................................................................................18112.001200120
........................................................................................................................................................CGCATTGTATGGCCTACTTAAC....................................................................................................................................................................................................................22111.001100110
............................................................................................................TTAAGTAGTGGATACAAAAGGCGAC.............................................................................................................................................................................................................................................................25111.001100110
..................................................................................................................AGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................18110.001000100
...........................................................................................................TTTAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................................................................................................2419.0090090
.............................................................................................................TAAGTAGTGGATACAAAAGG.................................................................................................................................................................................................................................................................2018.0080080
............................................................................................................TTAAGTAGTGGATACAAAAGCGA...............................................................................................................................................................................................................................................................2318.0080080
............................................................................................................TTAAGTAGTGGATACAAAAGGCGAAA............................................................................................................................................................................................................................................................2617.0070070
........................................................................................................................................................CGCATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................2316.0060060
...............................................................................................................AGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................2116.0060060
.................................................................................................................TAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................1914.0040040
.............................................................................................................TAAGTAGTGGATACAAAA...................................................................................................................................................................................................................................................................1814.0040040
............................................................................................................TTAAGTAGTGGATACAAAAGGCC...............................................................................................................................................................................................................................................................2314.0040040
.........................................................................................................................................................GCATTGTATGGCCTACTTAAC....................................................................................................................................................................................................................2113.0030030
............................................................................................................TTAAGTAGTGGATACAAAAGGCGATTT...........................................................................................................................................................................................................................................................2713.0030030
..........................................................................................................................................................CATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................2112.0020020
..................................................................................................................AGTGGATACAAAAGGCGAT.............................................................................................................................................................................................................................................................1912.0020020
..............................................................................................................AAGTAGTGGATACAAAAGGC................................................................................................................................................................................................................................................................2012.0020020
............................................................................................................TTAAGTAGTGGATACAAAAGGCGATC............................................................................................................................................................................................................................................................2612.0020020
.............................................................................................................TAAGTAGTGGATACAAAAGGCGATC............................................................................................................................................................................................................................................................2512.0020020
.............................................................................................................TAAGTAGTGGATACAAAAGGCGAC.............................................................................................................................................................................................................................................................2412.0020020
................................................................................................................GTAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................2012.0020020
..............................................................................................................AAGTAGTGGATACAAAAGG.................................................................................................................................................................................................................................................................1912.0020020
.................................................................................................................TAGTGGATACAAAAGGCGAT.............................................................................................................................................................................................................................................................2012.0020020
.............................................................................................................TAAGTAGTGGATACAAAAGGCGG..............................................................................................................................................................................................................................................................2311.0010010
.............................................................................................................TAAGTAGTGGATACAAAAGGCGATTC...........................................................................................................................................................................................................................................................2611.0010010
.............................................................................................................TAAGTAGTGGATACAAAAGGCAT..............................................................................................................................................................................................................................................................2311.0010010
............................................................................................................TTAAGTAGTGGATACAAAAGGCGACC............................................................................................................................................................................................................................................................2611.0010010
...................................................................................................................GTGGATACAAAAGGCGAT.............................................................................................................................................................................................................................................................1811.0010010
droSim2
GTGAT-ATAT-GT----------------------CAGA------GTATT---GTCGGAATAAATATAATAATAATCGGAAATATTT--------AGAAATTATATATTTAAGTAGTGGATACAAAAGGCGATTTGATATAAAAG----TATCGCATTGTATGGCCTACTTAACTAGCTGATTTTGTATTCCAAC-ATAAAA----T-GC----TAAATATTACTTATAATTTT------------------------GT----GAGCTAGGATAAAGTACAAAAGAATTTTGAAAACTACACAATCTTTT---------TTTTACG-TTCCCTTGTTTT--TTTCCAAGTTGA--------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................TTAAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................2415566.005566001401020012911308810328102000
.........................................................................................................................................................GCATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................221695.0069500616200000007700000
........................................................................................................................................................CGCATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................231307.0030710296000000001000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGG..............................................................................................................................................................................................................................................................241289.0028900590000062022200000
............................................................................................................TTAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................................................................................................231289.0028900352000087023601000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................................................................................................251275.002750017300002316021600000
........................................................................................................................................................CGCATTGTATGGCCTACTTAAC....................................................................................................................................................................................................................221271.0027100219001000005100000
.............................................................................................................TAAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................................................................................................241140.0014000040000311009500000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGC..............................................................................................................................................................................................................................................................241139.001390030000046012600000
..........................................................................................................................................................CATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................21181.0081007600000000500000
.............................................................................................................TAAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................23174.007400040000181104100000
............................................................................................................TTAAGTAGTGGATACAAAAGGC................................................................................................................................................................................................................................................................22165.0065006001001005700000
............................................................................................................TTAAGTAGTGGATACAAAAGG.................................................................................................................................................................................................................................................................21132.0032001006000701800000
.........................................................................................................................................................GCATTGTATGGCCTACTTAACC...................................................................................................................................................................................................................22123.0023002300000000000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGT..............................................................................................................................................................................................................................................................24121.0021000000000002100000
........................................................................................................................................................CGCATTGTATGGCCTACTTAACC...................................................................................................................................................................................................................23118.0018001800000000000000
.........................................................................................................................................................GCATTGTATGGCCTACTTAAC....................................................................................................................................................................................................................21117.0017001100000000600000
.............................................................................................................TAAGTAGTGGATACAAAAGGCGATA............................................................................................................................................................................................................................................................25114.0014000000000201200000
............................................................................................................TTAAGTAGTGGATACAAAAG..................................................................................................................................................................................................................................................................20113.001300100900000300000
.............................................................................................................TAAGTAGTGGATACAAAAGGCGATT............................................................................................................................................................................................................................................................25113.0013000000001001200000
.........................................................................................................................................................GCATTGTATGGCCTACTTAACTT..................................................................................................................................................................................................................2318.00800800000000000000
.............................................................................................................TAAGTAGTGGATACAAAAGGCGG..............................................................................................................................................................................................................................................................2318.00800000000000800000
.........................................................................................................................................................GCATTGTATGGCCTACTTAACG...................................................................................................................................................................................................................2218.00800800000000000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGAA.............................................................................................................................................................................................................................................................2518.00800000001400300000
......................................................................................................................................................ATCGCATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................2518.00800700000000100000
............................................................................................................TTAAGTAGTGGATACAAAA...................................................................................................................................................................................................................................................................1918.00800000800000000000
.............................................................................................................TAAGTAGTGGATACAAAAGGC................................................................................................................................................................................................................................................................2118.00800000000000800000
......................................................................................................................................................ATCGCATTGTATGGCCTACTT.......................................................................................................................................................................................................................2117.00700700000000000000
..............................................................................................................AAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................2216.00600020000210100000
.....................................................................................................................................................TATCGCATTGTATGGCCTACTTAACT...................................................................................................................................................................................................................2615.00500500000000000000
............................................................................................................TTAAGTAGTGGATACAAA....................................................................................................................................................................................................................................................................1815.00500000300000200000
..........................................................................................................................................................CATTGTATGGCCTACTTAACTT..................................................................................................................................................................................................................2215.00500500000000000000
..............................................................................................................AAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................................................................................................2315.00500000100210100000
......................................................................................................................................................ATCGCATTGTATGGCCTACTTAAC....................................................................................................................................................................................................................2415.00500300000000200000
........................................................................................................................................................CGCATTGTATGGCCTACT........................................................................................................................................................................................................................1814.00400400000000000000
..................................................................................................................AGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................1814.00400000000011200000
.............................................................................................................TAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................................................................................................2214.00400100000000300000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGATT............................................................................................................................................................................................................................................................2613.00300000000000300000
...............................................................................................................................................AG----TATCGCATTGTATGGCC............................................................................................................................................................................................................................1913.00300200000000100000
..............................................................................................................................................AAG----TATCGCATTGTATGGCC............................................................................................................................................................................................................................2013.00300300000000000000
........................................................................................................................................................CGCATTGTATGGCCTACTT.......................................................................................................................................................................................................................1913.00300300000000000000
......................................................................................................................................................ATCGCATTGTATGGCCTACT........................................................................................................................................................................................................................2013.00300300000000000000
.....................................................................................................................GGATACAAAAGGCGA..............................................................................................................................................................................................................................................................1513.00300000000120000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCGGA.............................................................................................................................................................................................................................................................2512.00200000000000200000
............................................................................................................TTAAGTAGTGGATACAAAAGGCCG..............................................................................................................................................................................................................................................................2412.00200000000000200000
............................................................................................................TTAAGTAGTGGATACAAAAA..................................................................................................................................................................................................................................................................2012.00200100000000100000
........................................................................................................................................................CGCATTGTATGGCCTACTTAACG...................................................................................................................................................................................................................2312.00200200000000000000
.....................................................................................................................................................TATCGCATTGTATGGCCTACT........................................................................................................................................................................................................................2112.00200200000000000000
..........................................................................................................................................ATAAAAG----TATCGCATTGTATGGCC............................................................................................................................................................................................................................2412.00200200000000000000
...........................................................................................................................................TAAAAG----TATCGCATTGTATGGCC............................................................................................................................................................................................................................2312.00200200000000000000
...................................................................................................................GTGGATACAAAAGGCGAT.............................................................................................................................................................................................................................................................1812.00200000000010100000
.........................................................................................................................................TATAAAAG----TATCGCATTGTATGGCC............................................................................................................................................................................................................................2512.00200200000000000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCTC..............................................................................................................................................................................................................................................................2412.00200100000000100000
.....................................................................................................................................................TATCGCATTGTATGGCCTACTTAAC....................................................................................................................................................................................................................2512.00200200000000000000
..........................................................................................................................................................CATTGTATGGCCTACTTAAC....................................................................................................................................................................................................................2012.00200100000000100000
.............................................................................................................TAAGTAGTGGATACAAAAGGCGATC............................................................................................................................................................................................................................................................2512.00200000000000200000
.............................................................................................................TAAGTAGTGGATACAAAAGGCGC..............................................................................................................................................................................................................................................................2311.00100000000000100000
.........................................................................................................................................................GCATTGTATGGCCTACTTAACTC..................................................................................................................................................................................................................2311.00100100000000000000
.............................................................................................................TAAGTAGTGGATACAAAAGG.................................................................................................................................................................................................................................................................2011.00100000000000100000
.............................................................................................................TAAGTAGTGGATACAAAA...................................................................................................................................................................................................................................................................1811.00100000000000100000
.............................................................................................................TAAGTAGTGGATACAAAAG..................................................................................................................................................................................................................................................................1911.00100000100000000000
............................................................................................................TTAAGTAGTGGATACAAAAGGCCC..............................................................................................................................................................................................................................................................2411.00100000000000100000
.........................................................................................................................................................GCATTGTATGGCCTACTTACT....................................................................................................................................................................................................................2111.00100100000000000000
.................................................................................................................TAGTGGATACAAAAGGCGA..............................................................................................................................................................................................................................................................1911.00100010000000000000
...................................CAGA------GTATT---GTCGGAATAAATATA..............................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
..................................................................................................................AGTGGATACAAAAGGCGG..............................................................................................................................................................................................................................................................1811.00100100000000000000
dm3
GTGAT-A-A-T--GCAAGAGTATT--G------------TAT----------------------------------CGGAATTAATT--------AGAAATTATATATTTAAGTAGTGGATACAAAGGGCGATTTGATATAAAAG----TGTCGCATTGTATGACCTACTTAACTAGCTGATTTTGTATCCCAAC-ATAATA----G-GT----TAAAAATTAATTCGAATTTT------------------------GT----GAGCTGGGATAAAGTACCAAAGAATTTTGAAAACTGCACATTCTTTTAAGACAAAATTTTACT-TTCCCTTGTTTTTTTTTCCAAATTGAG------AATTTGT---TGCCATTG-AAATCGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................TTAAGTAGTGGATACAAAGGGCGA..............................................................................................................................................................................................................................................................24112964.00129640000100135210100000000000000000000000100010000010000000000100000000000000000000000020182422000001000030000012000030010522101600000000200000000000000030030706000000000000000000001100004000000000000030000000000700000110000000000003030003205720039000058228510000000020000002000000000141061100000000000000120635935053130000000000010000202095410111047892312000000
............................................................................................................TTAAGTAGTGGATACAAAGGG.................................................................................................................................................................................................................................................................2112968.00296800000000000000000000000000000000003840000100000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000040011030000200000001000000000000000000000000000000010000000000000000000000001130000010132040000221500000000020000000000000000071076000000000000030001892238004000000000000000010003210000002660001000
............................................................................................................TTAAGTAGTGGATACAAAGGGCG...............................................................................................................................................................................................................................................................2311844.00184400000000500000000000000000000000000000000000000000000000000000000000000000000000010622300000000010000000000000000310001000000000000000000000070023000000000000000000000000000000000000000000000000001000000000000000000001000100020118011700006541000000000000000000000400000100250000000000000220070174000300000000000000003000512100010911310000000
.........................................................................................................................................................GCATTGTATGACCTACTTAACT...................................................................................................................................................................................................................2211834.001834000000052710000000000000000000000000000000000000000000000000000000000000000000000007340649676700120300100350010000100001443702100000000200000000000000012532000000000000000000000010000000000000000000000000000000000000000000000000000000150720130000590000000000000000000000000001000000000000000000000531400000000000000000000000100000000010000000
............................................................................................................TTAAGTAGTGGATACAAAGGGC................................................................................................................................................................................................................................................................2211769.001769000000001000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000001000300200000000000000000000100000000000000000000000000000000000000000000000000010000000412120000380000000000000000000000000001001000000000000001101496952005000000000000002000008220120842314830003000
............................................................................................................TTAAGTAGTGGATACAAAGG..................................................................................................................................................................................................................................................................2011041.00104100000000000000000000000000000000004430000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000010060000000000000000000000000000000000000000000000000020000000000000000000000100000000310700007400000000000000000000000000020022000000000000000004550500000000100001000100000400000000000000000
.............................................................................................................TAAGTAGTGGATACAAAGGGCGAT.............................................................................................................................................................................................................................................................241963.009630000000041000000000000000000000000000000000000000000000000000000000000000000000004068150000000000000000000000000050000000000000000000000000000004600000000000000000000000000001000000000000000000000000000000000000000000000000000013001000060330000000000000000000000000000000000000000000000000506196010000000000000000000005000000012100000000
.............................................................................................................TAAGTAGTGGATACAAAGGGC................................................................................................................................................................................................................................................................211472.004720000000000000000000000000000000000000000000000000000007000000000000000000000000001001000000000000000000000000000000000000000000000000000000200180000000000000000000000000000000000000000000000000000100000000000000100000000000000100700000000000000000000000000000000010011000000000000000002161490000000000000000000000029301220047170000000
.............................................................................................................TAAGTAGTGGATACAAAGGGCG...............................................................................................................................................................................................................................................................221329.0032900000000100000000000000000000000000000000000000000000000000000000000000000000000000233000000000000000000000000003000000000000000000000000000300600000000000000000000000000000000000000000000000000000000000000000000000000000001014003000091400000000010000000000000000000001000000000000000001895500000000100000000000000100001102240000000
.............................................................................................................TAAGTAGTGGATACAAAGGGCGA..............................................................................................................................................................................................................................................................231266.00266000000001000000000000000000000000000000000000000000000000000000000000000000000000001480000000000000000000001000001000000000000000000000000001000000000000000000000000002000000000000000000000000000000000000000000000000000000000130000000221400000000000000000000000000000000000000000000000001256000000000000000000000000210000003250000000
............................................................................................................TTAAGTAGTGGATACAAAGGGCGG..............................................................................................................................................................................................................................................................241246.00246000000000000000000000000000000000000000000000000000000000000000000000000000000000001867000000000000000000000000003460200000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129001000000000000000000000000000000000000000000000022300000000000000000000000000000000010000000
............................................................................................................TTAAGTAGTGGATACAAAG...................................................................................................................................................................................................................................................................191179.00179000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000116000000000000000100000000000000000000000000
........................................................................................................................................................CGCATTGTATGACCTACTTAAC....................................................................................................................................................................................................................221175.0017500000000310000000000000000000000000000000000000000000000000000000000000000000000080216800000000000000000000000000178000000000000000000000000001220500000000000000000000000000000000000000000000000000000000000000000000000000000050001010000370000000001000000000000000000000000000000000000000111000000000000000000000000000000000000000000
.............................................................................................................TAAGTAGTGGATACAAAGGG.................................................................................................................................................................................................................................................................201150.00150000000000000000000000000000000000065000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000220000000000000000000000000000000200000000000000000145800100000000000000000000300000001000000000
............................................................................................................TTAAGTAGTGGATACAAAGGGCGC..............................................................................................................................................................................................................................................................241136.0013600000000000000000000000000000000000000000000000000000000000000000000000000000000020612000000000100000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022130000000000000000000000000000000100000000000000000413400000000000000000000000000000000000000000
........................................................................................................................................................CGCATTGTATGACCTACTTAACT...................................................................................................................................................................................................................231108.00108000000010200000000000000000000000000000000000000000000000000000000000000000000000150621900001000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000
............................................................................................................TTAAGTAGTGGATACAAAGGGCGAT.............................................................................................................................................................................................................................................................251100.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000620000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020010000720000000000000000000000000001000200000000000000000402400000000000000000000000800000000040000000
............................................................................................................TTAAGTAGTGGATACAAA....................................................................................................................................................................................................................................................................18192.00920000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016000000000000000000000000000000000000000000000000008300000000000000000000000000000000000000000
..........................................................................................................................................................CATTGTATGACCTACTTAACT...................................................................................................................................................................................................................21187.008700000001500000000000000000000000000000000000000000000000000000000000000000000000040193100000000010000000000000000760000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000002000000000000000001000000000000000000000000000000001800000000000000000000000000000000000000000
............................................................................................................TTAAGTAGTGGATACAAAGGGG................................................................................................................................................................................................................................................................22153.005300000000000000000000000000000000001000000000000000000000000000000000000000000000000150000000000000000000000000020000000000000000000000000000002000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000101900000000030000001000000000000002000000000000000000200000000000000000000000300000000010000000
............................................................................................................TTAAGTAGTGGATACAAAGGGCGT..............................................................................................................................................................................................................................................................24137.00370000000000000000000000000000000000000000000000000000000000000000000000000000000001011200000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000100000002100000000000000000000000000000010000000000000000008600000000000000000000000000000000010000000
..............................................................................................................AAGTAGTGGATACAAAGGG.................................................................................................................................................................................................................................................................19136.00360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013500000000000000000000000000000000000000000
.............................................................................................................TAAGTAGTGGATACAAAGG..................................................................................................................................................................................................................................................................19130.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000062100000000000000000000000100000000000000000
.............................................................................................................TAAGTAGTGGATACAAAG...................................................................................................................................................................................................................................................................18124.00240000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000001800000000000000000000000000000000000000000
........................................................................................................................................................CGCATTGTATGACCTACTTAA.....................................................................................................................................................................................................................21122.00220000000000000000000000000000000000000000000000000000000000000000000000000000000001012000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004100000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000
.............................................................................................................TAAGTAGTGGATACAAAGGGG................................................................................................................................................................................................................................................................21122.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000040000000000000000040006000000000000000000100000000000000000000000000000000000000000
..............................................................................................................AAGTAGTGGATACAAAGGGCGA..............................................................................................................................................................................................................................................................22115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000009500000000000000000000000000000000000000000
.........................................................................................................................................................GCATTGTATGACCTACTTAAC....................................................................................................................................................................................................................21115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000014300000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100100200000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000
............................................................................................................TTAAGTAGTGGATACAAAGGGCGAA.............................................................................................................................................................................................................................................................25115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007300000000000000000000000400000000000000000
............................................................................................................TTAAGTAGTGGATACAAAGGGA................................................................................................................................................................................................................................................................22110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010001400000000000000000000000100010100000000000
............................................................................................................TTAAGTAGTGGATACAAAGGCGA...............................................................................................................................................................................................................................................................2319.009000000003000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
............................................................................................................TTAAGTAGTGGATACAAAGT..................................................................................................................................................................................................................................................................2019.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000
............................................................................................................TTAAGTAGTGGATACAAAGGGCGAC.............................................................................................................................................................................................................................................................2519.009000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004300000000000000000000000000000000000000000
.............................................................................................................TAAGTAGTGGATACAAAGGGCGATT............................................................................................................................................................................................................................................................2519.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006200000000000000000000000000000000010000000
............................................................................................................TTAAGTAGTGGATACAAAGGGT................................................................................................................................................................................................................................................................2217.007000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000100000000000000000
..............................................................................................................AAGTAGTGGATACAAAGG..................................................................................................................................................................................................................................................................1817.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000
............................................................................................................TTAAGTAGTGGATACAAAGGT.................................................................................................................................................................................................................................................................2116.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000
............................................................................................................TTAAGTAGTGGATACAAAGGGCC...............................................................................................................................................................................................................................................................2316.006000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000
............................................................................................................TTAAGTAGTGGATACAAAGGGCT...............................................................................................................................................................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000010000000000000000001200000000000000000000000000000000000000000
............................................................................................................TTAAGTAGTGGATACAAAGGC.................................................................................................................................................................................................................................................................2115.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000
.............................................................................................................TAAGTAGTGGATACAAAGGGCGG..............................................................................................................................................................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................AAGTAGTGGATACAAAGGGC................................................................................................................................................................................................................................................................2015.005000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000
.........................................................................................................................................................GCATTGTATGACCTACTTAACC...................................................................................................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TTAAGTAGTGGATACAAAGGGCGATT............................................................................................................................................................................................................................................................2615.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000
............................................................................................................TTAAGTAGTGGATACAAAGGA.................................................................................................................................................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000300000000000000000000000000000000000000000
droEug1
AAT-------------------------------------------------------------------------------TTTAC--------AAAAATCATATACTTAAGTAGTGGATACAAATTGCGATTTTAA--AAT-AT---ACTCGCATTGTATGGCCTACTTAGTTAGTTGATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GTAAT-A------GA-ACAATTTC--A-------------------ATAT---TTTA----------------------AAATATTTAGAATTTAGAAAATCATTTGTTTAAGTAGTGCATACAAAAGGCGATTTGCTATCA-AAC---GTTCGCATTGTATGCCCTACTTAACTAGTTGGTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GTAAA-T---T--GGAAAATTGT-----------------TT----------------------------------TTGAAATTTCA--------AAAAATCATACATTTAAGTAGTGGATACAAAAGGCGATTTGCTAATAAAAT---GTTCGCATTGTATGGCCTACTTAACTAACTGATTTTTTTTAACAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TAAAA-T-ACA--ATAAA-AGATT--A-------------------TGTTTTGTTTA-----------------------------A--------AAAAATCATGTATTTAAGTAGTGGATACAAAAGGCGATTTACAAAATAAAT---GTTCGCATTGTATGCCCTACTTAACTAGCAGGTTTTTCCAAGCAACAACAACT----TAATTGTTTTAGAAT-----------TTATA-----------------------------------------------------------------------------------------------TTCGATCTTATTT-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GTAGA-TTAAT--AA-CTAAAATT--C-------------------TGTTA---TAA-----------------------------A--------AAAAATCATATGTTTAAGTAGTGGATACAAATGGCGACTTGCAAACGAAAT---GTTCGCATTGTATGTCCTACTTAAGTAGCTGATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTAT--A-C-A--AGAAAAGTGTT--T-------------------TATTT-------------------------TTAACATATTA--------AAAAATCATACGTTTAAGTAGTGGATACAAAAGGCGATTTAT-ATAAAAAA---GTTCGCATTGTATGTCCTACTTAAGTGGCTGATTTTTTCAAGCAAC-ATCAAA----AAATTGT-----------TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CTGAC-CTAAA--ATAAGGACAT---ACA----------TAT-----CTGTTAATTA-----------------------------A--------GAAAATCGTATGTTTAAGTAGTGGATACAA-CGGCGATTGAACACAATAAT---CTTCGCAGTGTGTTACCTACTTAATTAGTCGATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
A---------------------------------------------------------------------------------------------------TCATGTGTTTAAGTAGGCAATACAT-GGGCGACTAAATAAAAT-AT---ACTCGCAATGTATAGCCTACATAACTAGTTGATTTTTGCAAGCATCCATTACA----A-AT----TAA-------ATACAATTTTA-AGTTGAAGTGATTATTGTTATTGAAATCCAGCTACCGT----TAAGAAAAAGTCTTGAATATTACCCTTACAAAT---------ATCTCAGTTTATCTCGATTGTATTTGT-----------------ATGGAAATGGCATTCCGATACGSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
............................................................................................................TTAAGTAGGCAATACAT-GGGCGA..............................................................................................................................................................................................................................................................2316998.0069985595510025724
............................................................................................................TTAAGTAGGCAATACAT-GGG.................................................................................................................................................................................................................................................................201371.003710191177003
............................................................................................................TTAAGTAGGCAATACAT-GGGC................................................................................................................................................................................................................................................................211299.00299022967021
............................................................................................................TTAAGTAGGCAATACAT-GGGCG...............................................................................................................................................................................................................................................................221257.00257119557022
.............................................................................................................TAAGTAGGCAATACAT-GGGCGA..............................................................................................................................................................................................................................................................22178.007806216000
............................................................................................................TTAAGTAGGCAATACAT-GG..................................................................................................................................................................................................................................................................19148.004803018000
............................................................................................................TTAAGTAGGCAATACAT-GGGCGAC.............................................................................................................................................................................................................................................................24144.00440440000
...........................................................................................................TTTAAGTAGGCAATACAT-GGGCGA..............................................................................................................................................................................................................................................................24142.00420384000
.........................................................................................................................................................GCAATGTATAGCCTACATAACT...................................................................................................................................................................................................................22139.00390345000
............................................................................................................TTAAGTAGGCAATACAT-GGGCGG..............................................................................................................................................................................................................................................................23121.00210129000
............................................................................................................TTAAGTAGGCAATACAT-GGGCGAA.............................................................................................................................................................................................................................................................24115.00150132000
............................................................................................................TTAAGTAGGCAATACAT-GGGCGAT.............................................................................................................................................................................................................................................................24114.00140140000
..............................................................................................................AAGTAGGCAATACAT-GGGCGA..............................................................................................................................................................................................................................................................21113.00130103000
.........................................................................................................................................................GCAATGTATAGCCTACATAACC...................................................................................................................................................................................................................22111.00110110000
............................................................................................................TTAAGTAGGCAATACAT-GGGCGC..............................................................................................................................................................................................................................................................23110.0010019000
.............................................................................................................TAAGTAGGCAATACAT-GGGCGAC.............................................................................................................................................................................................................................................................23110.00100100000
............................................................................................................TTAAGTAGGCAATACAT-GGGCGT..............................................................................................................................................................................................................................................................2316.006032010
............................................................................................................TTAAGTAGGCAATACAT-GGGCGACT............................................................................................................................................................................................................................................................2516.006060000
............................................................................................................TTAAGTAGGCAATACAT-G...................................................................................................................................................................................................................................................................1816.006033000
.............................................................................................................TAAGTAGGCAATACAT-GGGCG...............................................................................................................................................................................................................................................................2114.004022000
.........................................................................................................................................................GCAATGTATAGCCTACATAAC....................................................................................................................................................................................................................2114.004040000
...........................................................................................................TTTAAGTAGGCAATACAT-GGG.................................................................................................................................................................................................................................................................2114.004022000
............................................................................................................TTAAGTAGGCAATACAT-GGGCC...............................................................................................................................................................................................................................................................2214.004040000
.............................................................................................................TAAGTAGGCAATACAT-GGGC................................................................................................................................................................................................................................................................2014.004040000
...............................................................................................................AGTAGGCAATACAT-GGGCGACTA...........................................................................................................................................................................................................................................................2313.003030000
..............................................................................................................AAGTAGGCAATACAT-GGG.................................................................................................................................................................................................................................................................1813.003012000
............................................................................................................TTAAGTAGGCAATACAT-GGT.................................................................................................................................................................................................................................................................2013.003012000
..............................................................................................................AAGTAGGCAATACAT-GGGC................................................................................................................................................................................................................................................................1913.003030000
..............................................................................................................AAGTAGGCAATACAT-GGGCGACT............................................................................................................................................................................................................................................................2313.003021000
......................................................................................................................................................CTCGCAATGTATAGCCTACATA......................................................................................................................................................................................................................2213.003021000
............................................................................................................TTAAGTAGGCAATACAT-GGGCGAAA............................................................................................................................................................................................................................................................2512.002020000
...........................................................................................................TTTAAGTAGGCAATACAT-GGGCG...............................................................................................................................................................................................................................................................2312.002011000
.............................................................................................................TAAGTAGGCAATACAT-GGG.................................................................................................................................................................................................................................................................1912.002002000
.................................................................................................................TAGGCAATACAT-GGGCGA..............................................................................................................................................................................................................................................................1812.002011000
............................................................................................................TTAAGTAGGCAATACAT-GGGCGATA............................................................................................................................................................................................................................................................2512.002020000
.........................................................................................................................................................GCAATGTATAGCCTACATAACTT..................................................................................................................................................................................................................2311.001010000
...........................................................................................................TTTAAGTAGGCAATACAT-....................................................................................................................................................................................................................................................................1811.001001000
............................................................................................................TTAAGTAGGCAATACAT-GGGCGAG.............................................................................................................................................................................................................................................................2411.001010000
...............................................................................................................AGTAGGCAATACAT-GGGCGA..............................................................................................................................................................................................................................................................2011.001010000
............................................................................................................TTAAGTAGGCAATACAT-GGGCCC..............................................................................................................................................................................................................................................................2311.001001000
...............................................................................................................AGTAGGCAATACAT-GGGCGACC............................................................................................................................................................................................................................................................2211.001010000
...........................................................................................................TTTAAGTAGGCAATACAT-GG..................................................................................................................................................................................................................................................................2011.001001000
.............................................................................................................TAAGTAGGCAATACAT-GGGCGAA.............................................................................................................................................................................................................................................................2311.001010000
...........................................................................................................TTTAAGTAGGCAATACAT-GGGC................................................................................................................................................................................................................................................................2211.001010000
.............................................................................................................TAAGTAGGCAATACAT-GGGCGAT.............................................................................................................................................................................................................................................................2311.001010000
............................................................................................................TTAAGTAGGCAATACAT-GGGT................................................................................................................................................................................................................................................................2111.001000010
.............................................................................................................TAAGTAGGCAATACAT-GGGCGACC............................................................................................................................................................................................................................................................2411.001010000
...........................................................................................................TTTAAGTAGGCAATACAT-GGGCGAA.............................................................................................................................................................................................................................................................2511.001010000
droBip1
AATAT-CTTCC--AA-ACAATATT--A-------------------TCTTC---TTA----------------------ATATACAA----C---TTAAATCATGTGTTTAAGTAGGCAATACAT-GGGCGATTCATTA------C---ATTCGCAATGTATGGCTTACATAACTAGTTGATTTTTGAAGTCATCCATTCCA----AAGTTAA-----------TTTCTATCTTATATGTGAAGTGTGTATTGTTATTGAAATGAAGCTATCGT----TAACGTAAGGTCTCGAATATTACCCCTACAAAT---------ATCTCAGTTTATCTCGATTTTATTTGT-----------------ATGGAAATGGCATTCCGATTCGSizeHit CountTotal NormTotal
No Reads
dp5
GAGTT-ATC-AAT----------------------AGG----CAGGTCCT---CTCA-----------------------------A--------AATAATCGGGCACCTAAGTAGTTGATACAA-GGGCGATAATGTAAAAGAAC---TTTCGCATTGTGTGACCTACTTAAATGCTCGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
............................................................................................................CTAAGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................................................................................................2315183.005183068728120168400000
.........................................................................................................................................................GCATTGTGTGACCTACTTAAAT...................................................................................................................................................................................................................221711.00711051470018910000
.............................................................................................................TAAGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................................................................................................221528.00528090215022300000
.............................................................................................................TAAGTAGTTGATACAA-GGGCGAT.............................................................................................................................................................................................................................................................231472.00472025293015400000
............................................................................................................CTAAGTAGTTGATACAA-GGGC................................................................................................................................................................................................................................................................211198.001980886010400000
...........................................................................................................CCTAAGTAGTTGATACAA-GGGCG...............................................................................................................................................................................................................................................................231167.0016703611601500000
............................................................................................................CTAAGTAGTTGATACAA-GGGCG...............................................................................................................................................................................................................................................................221130.001300355504000000
.............................................................................................................TAAGTAGTTGATACAA-GGGCGAC.............................................................................................................................................................................................................................................................23178.007800770100000
............................................................................................................CTAAGTAGTTGATACAA-GGG.................................................................................................................................................................................................................................................................20166.0066022803600000
.........................................................................................................................................................GCATTGTGTGACCTACTTAAA....................................................................................................................................................................................................................21160.0060063601800000
.............................................................................................................TAAGTAGTTGATACAA-GGGC................................................................................................................................................................................................................................................................20150.0050001903100000
........................................................................................................................................................CGCATTGTGTGACCTACTTAAA....................................................................................................................................................................................................................22146.004602703700000
.........................................................................................................................................................GCATTGTGTGACCTACTTAAAC...................................................................................................................................................................................................................22146.004600460000000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGAT.............................................................................................................................................................................................................................................................24128.002806170500000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGC..............................................................................................................................................................................................................................................................23126.002600701900000
.............................................................................................................TAAGTAGTTGATACAA-GGGCG...............................................................................................................................................................................................................................................................21126.002605801300000
.......................................................................................................................................................TCGCATTGTGTGACCTACTTAAA....................................................................................................................................................................................................................23118.001800601200000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGT..............................................................................................................................................................................................................................................................23118.001801601100000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGG..............................................................................................................................................................................................................................................................23117.00170080900000
.............................................................................................................TAAGTAGTTGATACAA-GGGCGATT............................................................................................................................................................................................................................................................24114.001402110100000
...........................................................................................................CCTAAGTAGTTGATACAA-GGGC................................................................................................................................................................................................................................................................22113.001301110100000
............................................................................................................CTAAGTAGTTGATACAA-GG..................................................................................................................................................................................................................................................................19112.00120030900000
......................................................................................................................................................TTCGCATTGTGTGACCTACTTA......................................................................................................................................................................................................................22111.001101001000000
..............................................................................................................AAGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................................................................................................21111.00110820100000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGAC.............................................................................................................................................................................................................................................................24110.00100080200000
...........................................................................................................CCTAAGTAGTTGATACAA-GGG.................................................................................................................................................................................................................................................................2118.0080080000000
......................................................................................................................................................TTCGCATTGTGTGACCTACTTAAA....................................................................................................................................................................................................................2418.0080010700000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGAA.............................................................................................................................................................................................................................................................2417.0070230200000
.......................................................................................................................................................TCGCATTGTGTGACCTACTTAA.....................................................................................................................................................................................................................2217.0070010600000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGATA............................................................................................................................................................................................................................................................2517.0070060100000
...........................................................................................................CCTAAGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................................................................................................2417.0070230200000
..........................................................................................................................................................CATTGTGTGACCTACTTAAAT...................................................................................................................................................................................................................2117.0070330100000
..........................................................................................................................................................CATTGTGTGACCTACTTAAATG..................................................................................................................................................................................................................2216.0060020400000
.............................................................................................................TAAGTAGTTGATACAA-GGG.................................................................................................................................................................................................................................................................1916.0060000600000
.............................................................................................................TAAGTAGTTGATACAA-GGGCGATC............................................................................................................................................................................................................................................................2415.0050050000000
.........................................................................................................................................................GCATTGTGTGACCTACTTAA.....................................................................................................................................................................................................................2015.0050110300000
........................................................................................................................................................CGCATTGTGTGACCTACTTAA.....................................................................................................................................................................................................................2115.0050000500000
.............................................................................................................TAAGTAGTTGATACAA-GGGCGATA............................................................................................................................................................................................................................................................2414.0040020200000
...............................................................................................................AGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................................................................................................2014.0040200200000
.............................................................................................................TAAGTAGTTGATACAA-GGGCGG..............................................................................................................................................................................................................................................................2213.0030010200000
................................................CT---CTCA-----------------------------A--------AATAATCGGGCAC......................................................................................................................................................................................................................................................................................2013.0030030000000
...........................................................................................................................................................ATTGTGTGACCTACTTAAAT...................................................................................................................................................................................................................2013.0030010200000
......................................................................................................................................................TTCGCATTGTGTGACCTACTTAA.....................................................................................................................................................................................................................2313.0030100200000
.................................................T---CTCA-----------------------------A--------AATAATCGGGCAC......................................................................................................................................................................................................................................................................................1913.0030030000000
.............................................................................................................TAAGTAGTTGATACAA-GGGCGC..............................................................................................................................................................................................................................................................2213.0030030000000
..............................................................................................................AAGTAGTTGATACAA-GGGCGAT.............................................................................................................................................................................................................................................................2213.0030210000000
...............................................................................................................AGTAGTTGATACAA-GGGCGATAATG.........................................................................................................................................................................................................................................................2513.0030010200000
.............................................................................................................TAAGTAGTTGATACAA-GGGCGATTT...........................................................................................................................................................................................................................................................2512.0020010100000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGAG.............................................................................................................................................................................................................................................................2412.0020200000000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGATC............................................................................................................................................................................................................................................................2512.0020020000000
.............................................................................................................TAAGTAGTTGATACAA-GGGCGT..............................................................................................................................................................................................................................................................2211.0010000100000
.............................................................................................................TAAGTAGTTGATACAA-GGGCCT..............................................................................................................................................................................................................................................................2211.0010000100000
.........................................................................................................................................................GCATTGTGTGACCTACTTAAATA..................................................................................................................................................................................................................2311.0010010000000
............................................................................................................CTAAGTAGTTGATACAA-GGGG................................................................................................................................................................................................................................................................2111.0010010000000
................................................................................................................GTAGTTGATACAA-GGGCGA..............................................................................................................................................................................................................................................................1911.0010000100000
..............................................TCCT---CTCA-----------------------------A--------AATAATCGGGCA.......................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................GCATTGTGTGACCTACTTAAATG..................................................................................................................................................................................................................2311.0010000100000
droPer2
GAGTT-ATC-AAT----------------------AGG----CAGGTCCT---CTCA-----------------------------A--------AATAATCGGGCACCTAAGTAGTTGATACAA-GGGCGATAATGTAAAAGAAC---TTTCGCATTGTGTGACCTACTTAAATGCCCGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
............................................................................................................CTAAGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................................................................................................231877.00877391234401220
............................................................................................................CTAAGTAGTTGATACAA-GGGC................................................................................................................................................................................................................................................................211138.00138121017000
.........................................................................................................................................................GCATTGTGTGACCTACTTAAAT...................................................................................................................................................................................................................22198.009831463000
............................................................................................................CTAAGTAGTTGATACAA-GGGCG...............................................................................................................................................................................................................................................................22163.006349112010
............................................................................................................CTAAGTAGTTGATACAA-GGGCGG..............................................................................................................................................................................................................................................................23155.00555401000
.................................................T---CTCA-----------------------------A--------AATAATCGGGCAC......................................................................................................................................................................................................................................................................................19122.00221912000
.............................................................................................................TAAGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................................................................................................22118.00184212000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGC..............................................................................................................................................................................................................................................................23115.00151005000
................................................CT---CTCA-----------------------------A--------AATAATCGGGCAC......................................................................................................................................................................................................................................................................................2019.009900000
...........................................................................................................CCTAAGTAGTTGATACAA-GGGCG...............................................................................................................................................................................................................................................................2317.007420010
.............................................................................................................TAAGTAGTTGATACAA-GGGCGAT.............................................................................................................................................................................................................................................................2316.006402000
.........................................................................................................................................................GCATTGTGTGACCTACTTAAA....................................................................................................................................................................................................................2115.005203000
....................................................................................................................................TAATGTAAAAGAAC---TTTC.........................................................................................................................................................................................................................................1814.004400000
............................................................................................................CTAAGTAGTTGATACAA-GG..................................................................................................................................................................................................................................................................1914.004103000
............................................................................................................CTAAGTAGTTGATACAA-GGG.................................................................................................................................................................................................................................................................2014.004112000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGAC.............................................................................................................................................................................................................................................................2414.004400000
.......................................................................................................................................................TCGCATTGTGTGACCTACTTAAA....................................................................................................................................................................................................................2313.003003000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGT..............................................................................................................................................................................................................................................................2313.003102000
..........................................................................................................................................................CATTGTGTGACCTACTTAAATG..................................................................................................................................................................................................................2213.003300000
...........................................................................................................CCTAAGTAGTTGATACAA-GGGC................................................................................................................................................................................................................................................................2212.002200000
.....................................................CTCA-----------------------------A--------AATAATCGGGCAC......................................................................................................................................................................................................................................................................................1812.002200000
......................................................................................................................................................TTCGCATTGTGTGACCTACTTAAA....................................................................................................................................................................................................................2412.002002000
............................................................................................................CTAAGTAGTTGATACAA-GGGG................................................................................................................................................................................................................................................................2112.002200000
......................................................................................................................................................TTCGCATTGTGTGACCTACTTA......................................................................................................................................................................................................................2212.002002000
.................................................................................................................TAGTTGATACAA-GGGCGA..............................................................................................................................................................................................................................................................1812.002101000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGAA.............................................................................................................................................................................................................................................................2411.001001000
......................................................................................................................................................TTCGCATTGTGTGACCTACTTAA.....................................................................................................................................................................................................................2311.001001000
............................................................................................................CTAAGTAGTTGATACAA-GGGCGCC.............................................................................................................................................................................................................................................................2411.001100000
...............................................................................................................AGTAGTTGATACAA-GGGCG...............................................................................................................................................................................................................................................................1911.001001000
............................................................................................................CTAAGTAGTTGATACAA-GGGCA...............................................................................................................................................................................................................................................................2211.001001000
...............................................................................................................AGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................................................................................................2011.001100000
...............................................................................................................AGTAGTTGATACAA-GGGCGATAATG.........................................................................................................................................................................................................................................................2511.001001000
..........................................................................................................................................................CATTGTGTGACCTACTTAAAT...................................................................................................................................................................................................................2111.001001000
...........................................................................................................................................................ATTGTGTGACCTACTTAAAT...................................................................................................................................................................................................................2011.001001000
...............................................CCT---CTCA-----------------------------A--------AATAATCGGGCAC......................................................................................................................................................................................................................................................................................2111.001100000
droWil2
AGAAA-GTATT--GAAAAAGTGT---TCATT----TGA---TCTG-----------------------------------GTCATTG--------AAAAATGTTACACTTAAGTAGTTAATACAA-TGGCGATTCGT-ATTCCATTGTACATCGCATTGTGTGAGTTACTTTGTTGAGAGATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................TTAAGTAGTTAATACAA-TGGCGA..............................................................................................................................................................................................................................................................23125007.0025007014902483820
............................................................................................................TTAAGTAGTTAATACAA-TGGCG...............................................................................................................................................................................................................................................................2211805.00180506017981
............................................................................................................TTAAGTAGTTAATACAA-TGGCGAT.............................................................................................................................................................................................................................................................241762.007620707541
.............................................................................................................TAAGTAGTTAATACAA-TGGCGAT.............................................................................................................................................................................................................................................................231592.005920605860
.........................................................................................................................................................GCATTGTGTGAGTTACTTTGTT...................................................................................................................................................................................................................22196.0096000960
.............................................................................................................TAAGTAGTTAATACAA-TGGCGA..............................................................................................................................................................................................................................................................22191.00910120790
...........................................................................................................CTTAAGTAGTTAATACAA-TGGCG...............................................................................................................................................................................................................................................................23164.0064000640
...........................................................................................................CTTAAGTAGTTAATACAA-TGGCGA..............................................................................................................................................................................................................................................................24135.0035000350
............................................................................................................TTAAGTAGTTAATACAA-TGGCGAA.............................................................................................................................................................................................................................................................24128.0028000280
............................................................................................................TTAAGTAGTTAATACAA-TGG.................................................................................................................................................................................................................................................................20119.0019010180
............................................................................................................TTAAGTAGTTAATACAA-TGGCGG..............................................................................................................................................................................................................................................................23115.0015000150
............................................................................................................TTAAGTAGTTAATACAA-TGGCGATT............................................................................................................................................................................................................................................................25112.0012000120
............................................................................................................TTAAGTAGTTAATACAA-TGGCA...............................................................................................................................................................................................................................................................22112.0012000120
.............................................................................................................TAAGTAGTTAATACAA-TGGCGATT............................................................................................................................................................................................................................................................24110.0010000100
.............................................................................................................TAAGTAGTTAATACAA-TGGCG...............................................................................................................................................................................................................................................................21110.0010000100
............................................................................................................TTAAGTAGTTAATACAA-TGGC................................................................................................................................................................................................................................................................2119.00900090
..............................................................................................................AAGTAGTTAATACAA-TGGCGA..............................................................................................................................................................................................................................................................2119.00901080
............................................................................................................TTAAGTAGTTAATACAA-TGGCGC..............................................................................................................................................................................................................................................................2319.00900090
........................................................................................................................................................CGCATTGTGTGAGTTACTTTGTT...................................................................................................................................................................................................................2318.00800080
...............................................................................................................AGTAGTTAATACAA-TGGCGA..............................................................................................................................................................................................................................................................2016.00600060
............................................................................................................TTAAGTAGTTAATACAA-TGGCGAC.............................................................................................................................................................................................................................................................2415.00500050
..............................................................................................................AAGTAGTTAATACAA-TGGCGAT.............................................................................................................................................................................................................................................................2215.00503020
............................................................................................................TTAAGTAGTTAATACAA-TGGCT...............................................................................................................................................................................................................................................................2214.00400040
....................................................................................................................................TTCGT-ATTCCATTGTACATC.........................................................................................................................................................................................................................................2014.00400040
.........................................................................................................................................................GCATTGTGTGAGTTACTTTG.....................................................................................................................................................................................................................2013.00300030
........................................................................................................................................................CGCATTGTGTGAGTTACTTTG.....................................................................................................................................................................................................................2113.00300030
............................................................................................................TTAAGTAGTTAATACAA-TGGCGT..............................................................................................................................................................................................................................................................2313.00300030
.............................................................................................................TAAGTAGTTAATACAA-TGGC................................................................................................................................................................................................................................................................2013.00300030
.............................................................................................................TAAGTAGTTAATACAA-TGGCGATA............................................................................................................................................................................................................................................................2412.00200020
.......................................................................................................................................................TCGCATTGTGTGAGTTACTTTG.....................................................................................................................................................................................................................2212.00200020
..........................................................................................................................................................CATTGTGTGAGTTACTTTGTTG..................................................................................................................................................................................................................2212.00200020
............................................................................................................TTAAGTAGTTAATACAA-TGCGA...............................................................................................................................................................................................................................................................2231.67500050
.................................................................................................................TAGTTAATACAA-TGGCGA..............................................................................................................................................................................................................................................................1811.00100010
............................................................................................................TTAAGTAGTTAATACAA-T...................................................................................................................................................................................................................................................................1811.00101000
.........................................................................................................................................................GCATTGTGTGAGTTACTTTGTTA..................................................................................................................................................................................................................2311.00100010
........................................................................................................................................................CGCATTGTGTGAGTTACTTTGT....................................................................................................................................................................................................................2211.00100010
............................................................................................................TTAAGTAGTTAATACAA-TGGCGATA............................................................................................................................................................................................................................................................2511.00100010
............................................................................................................TTAAGTAGTTAATACAA-TGGCC...............................................................................................................................................................................................................................................................2211.00100010
.............................................................................................................TAAGTAGTTAATACAA-TGG.................................................................................................................................................................................................................................................................1911.00100010
...............................................................................................................AGTAGTTAATACAA-TGGCGAT.............................................................................................................................................................................................................................................................2111.00100010
............................................................................................................TTAAGTAGTTAATACAA-TGA.................................................................................................................................................................................................................................................................2011.00100010
.................................................................................................................TAGTTAATACAA-TGGCGATT............................................................................................................................................................................................................................................................2011.00100010
...........................................................................................................CTTAAGTAGTTAATACAA-TGGCGAT.............................................................................................................................................................................................................................................................2511.00100010
............................................................................................................TTAAGTAGTTAATACAA-TGCG................................................................................................................................................................................................................................................................2111.00100010
............................................................................................................TTAAGTAGTTAATACAA-TGGCGATC............................................................................................................................................................................................................................................................2511.00100010
droVir3
GACAAAC---T--AAAAAA-TTTAAATCATTGCTAAGG----CT--TGCTG---CAA-----------------------------T--------GAAAATTGAACGCTTAAGTAGTTAATACAA-GGGCGAGTTTTTT--CTTG----CATCGCATTGTGTGACCTACTTAAATGACAAATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
............................................................................................................TTAAGTAGTTAATACAA-GGGCGA..............................................................................................................................................................................................................................................................2318526.0085261113826010100000000000000001000102625927390010102185611061711623362491921861750004692049270021312510010112975674551
............................................................................................................TTAAGTAGTTAATACAA-GGGCG...............................................................................................................................................................................................................................................................221517.005170011200000000000001000001000001000000000000001079143430513719242300045890000000100000013500
.............................................................................................................TAAGTAGTTAATACAA-GGGCGA..............................................................................................................................................................................................................................................................221474.004740001650000000000000000000000110000002180000010173371217171910700048107010001220000002101351
.........................................................................................................................................................GCATTGTGTGACCTACTTAAAT...................................................................................................................................................................................................................221406.004060001000000000000000000000000000000000010000000213141231181811101712000213100000112700000033141513
............................................................................................................TTAAGTAGTTAATACAA-GGGC................................................................................................................................................................................................................................................................21187.0087000380000000000000000000000000000000000000000000133584410001060000020000000000002
............................................................................................................TTAAGTAGTTAATACAA-GGG.................................................................................................................................................................................................................................................................20176.0076000160000000000000000000000000000000000000000021262929870001020000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGGCGAT.............................................................................................................................................................................................................................................................24167.006700028000000000000000000000000000000000000000000201075135000560000010000000002100
............................................................................................................TTAAGTAGTTAATACAA-GGGCGAA.............................................................................................................................................................................................................................................................24153.0053000250000000000000000000000000001000000000000000011221300003110000000100000010001
.............................................................................................................TAAGTAGTTAATACAA-GGGCG...............................................................................................................................................................................................................................................................21132.00320015000000000000000000000000000000000000000000131122513000050000000000000000110
.........................................................................................................................................................GCATTGTGTGACCTACTTAAA....................................................................................................................................................................................................................21129.00290005000000000000000000000000000000011000000001013050120000340000000100000010000
............................................................................................................TTAAGTAGTTAATACAA-GGGCGC..............................................................................................................................................................................................................................................................23127.002700040000000000000000000000000000000000000000000000101110001180000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGGCGT..............................................................................................................................................................................................................................................................23126.002600012000000000000000000000000000000000000000000001041000000260000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGGCGG..............................................................................................................................................................................................................................................................23126.00260007000000000000000000000000000000000000000000000031121000470000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGGCGAC.............................................................................................................................................................................................................................................................24125.00250006000000000000000000000000000000000000000001001140220000710000000000000000000
.........................................................................................................................................................GCATTGTGTGACCTACTTAAATT..................................................................................................................................................................................................................23123.00230005000000000000000000000000000000000000000002014020001000030000001100000002100
...........................................................................................................CTTAAGTAGTTAATACAA-GGGCGA..............................................................................................................................................................................................................................................................24113.00130008000000000000000000000000000000000000000000000000000000050000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGGCGATC............................................................................................................................................................................................................................................................25112.00120000000000000000000000000000000000000000000000012141011000100000000000000000000
..............................................................................................................AAGTAGTTAATACAA-GGGCGA..............................................................................................................................................................................................................................................................2116.0060004000000000000000000000000000000000000000000000000000000010000000000000000001
............................................................................................................TTAAGTAGTTAATACAA-GGGCGAAA............................................................................................................................................................................................................................................................2516.0060004000000000000000000000000000000000000000000000000000000110000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GG..................................................................................................................................................................................................................................................................1915.0050001000000000000000000000000000000000000000000001002000000100000000000000000000
.............................................................................................................TAAGTAGTTAATACAA-GGGCGAT.............................................................................................................................................................................................................................................................2315.0050002000000000000000000000000000000000000000000000000100000000000000000000001100
.............................................................................................................TAAGTAGTTAATACAA-GGG.................................................................................................................................................................................................................................................................1914.0040001000000000000000000000000000000000000000000000110010000000000000000000000000
.............................................................................................................TAAGTAGTTAATACAA-GGGCGC..............................................................................................................................................................................................................................................................2214.0040002000000000000000000000000000000000000000000000000000000020000000000000000000
.............................................................................................................TAAGTAGTTAATACAA-GGGCGT..............................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000010001100000000000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGGCT...............................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000100000001000100000000000000000000
..........................................................................................................................................................CATTGTGTGACCTACTTAAAT...................................................................................................................................................................................................................2113.0030001000000000000000000000000000000000000000000000001000000010000000000000000000
.........................................................................................................................................................GCATTGTGTGACCTACTT.......................................................................................................................................................................................................................1812.0020002000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GCATTGTGTGACCTACTTAAAC...................................................................................................................................................................................................................2212.0020002000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GTTTTTT--CTTG----CATCGCATTGTGTGACCTACTTAAAT...................................................................................................................................................................................................................3712.0020000000000000000000000000000000000000000000000000000011000000000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGGCGTT.............................................................................................................................................................................................................................................................2412.0020001000000000000000000000000000000000000000000000000000000010000000000000000000
.........................................................................................................................................................GCATTGTGTGACCTACTTAA.....................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000010000000010000000000000000000
.............................................................................................................TAAGTAGTTAATACAA-GGGCGAG.............................................................................................................................................................................................................................................................2312.0020002000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGGCA...............................................................................................................................................................................................................................................................2212.0020001000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGGCGATA............................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000001010000000000000000000000000
.............................................................................................................TAAGTAGTTAATACAA-GGGC................................................................................................................................................................................................................................................................2012.0020001000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGGCC...............................................................................................................................................................................................................................................................2212.0020002000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GCATTGTGTGACCTACTTAAATA..................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000001000010000000000000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGGCGAAAC...........................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000010000000000000000100
.............................................................................................................TAAGTAGTTAATACAA-GGGCGAGT............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................TAAGTAGTTAATACAA-GGGCGAC.............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................G----CATCGCATTGTGTGACCTACTTAA.....................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................GTTTTTT--CTTG----CATC.........................................................................................................................................................................................................................................1511.0010000000000000000000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................AGTAGTTAATACAA-GGGCGA..............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000
........................................................................................................................................................CGCATTGTGTGACCTACTTAA.....................................................................................................................................................................................................................2111.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGGCGAAC............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................GCATTGTGTGACCTACTTAAATTT.................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................TCGCATTGTGTGACCTACTTAA.....................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000
........................................................................................................................................................CGCATTGTGTGACCTACTTA......................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000100000000000000000000000000000000
..............................................................................................................AAGTAGTTAATACAA-GGGCGAGT............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGA.................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000
............................................................................................................TTAAGTAGTTAATACAA-GGGCGTC.............................................................................................................................................................................................................................................................2411.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TAAGTAGTTAATACAA-GGGCGTT.............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000
.....................................................................................................................................TTTTTT--CTTG----CATCGCATTGTGTGACCT...........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000010000000000000000000000000000

Generated: 10/20/2015 at 11:18 PM