ID:

dya_188

 Coordinate:

2L:834244-834508 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.5 -31.4 -31.3

Flybase annnotation

exon [dyak_GLEANR_1736:1]; CDS [Dyak\GE15887-cds]; exon [dyak_GLEANR_1736:2]; CDS [Dyak\GE15887-cds]; intron [Dyak\GE15887-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------###########-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TAAATTACACCGCACACACAAACATACACACACCTGTAAATGTGTGCAAAGTGAGTGTGTCAGTGTGCGTCGAAGGAGAGGAAAGGTCAAGCCGAAAATTGCGTAAAGGAATTTCGCAAAGAGAGAGGGGAACGGGGAGTTACGTCAGTTTCGCATGCACAATAAACAATTTCGATTCCCTGGGCGATCCTGATAGCCAAAAAACGATAGCAGCGGAGATTTACGTCAGTTCCGATACCGATACCTATACCGAAACCAATTCCCGAAAGAATTCGAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
******************************************************..((.((.((.(((((((.......((..(((....(((.....(((((.(((....)))))))).............(((((((((......((((............))))......))))))))))))...))).....))......)))).))))).)).))************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V120
male body		 GSM1528802
follicle cells		 M043
female body
 M056
embryo
 V046
embryo
 V052
head
 V058
head
.............................................GCAAAGTGAGTGTGTCAGT............................................................................................................................................................................................................................................................................................................. 19 0 1 4.00 4 2 0 2 0 0 0 0
................................................................................................................................................................................TACCTGGGTGATCCTGCTAG......................................................................................................................................................................... 20 3 3 2.00 6 0 6 0 0 0 0 0
..............................................................................................................................................................................................TGATAGCCAAAAAACGATAGCAGCGGAGAT................................................................................................................................................. 30 0 1 2.00 2 0 2 0 0 0 0 0
................................................................................................................................................................................TACCTGGGCGATCCTGCCAG......................................................................................................................................................................... 20 3 4 1.75 7 0 7 0 0 0 0 0
........................................TGTGTGCAAAGTGAGTGTGTCAGTGT........................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................GCCAAAAAACGATAGCAGCGGA.................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0
.........................................................TGGCAGTGTGGGTCGAAGG................................................................................................................................................................................................................................................................................................. 19 2 1 1.00 1 0 0 0 0 0 1 0
......................................................................................................................................................................................................AAAAAACGATAGCAGCGGA.................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0
......................................................GTGTGTCAGTGTGCGTCGAAGGAG............................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................ATTCGAAAAATCAGGCAAGATT......................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................GTGTGCGTCGAAGGAGAGGAAAGGTCAA................................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
................................................................GTGCGTCGAAGGAGAGGAAAG........................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................TACCTGGTCGATCCTGACAG......................................................................................................................................................................... 20 3 2 1.00 2 0 2 0 0 0 0 0
................................................................................GAAAGGTCAAGCCGAAAATTGCGT..................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.............................................GCAAAGTGAGTGTGTCATT............................................................................................................................................................................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0
...................................GTAAATGTGTGCAAAGTGAGTGT................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................GATTTACGTCAGTTCCGATACCGA............................................................................................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0
...............................................................................................................................................................................TTCCCTGGGCGATCCTGATAGCCA...................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................................TTCGAAAAATCAGGCAAGATTCA....................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
............................CACACCTGTAAATGTGTGCAAAGTGAGTGT................................................................................................................................................................................................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................CGAAGGAGAGGAAAGGTCAAGCCGAA............................................................................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
.......................................ATGTGTGCAAAGTGAGTGT................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
......................................AATGTGTGCAAAGTGAGTGTGTCAGT............................................................................................................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................TAAAGGAATTTCGCAAAGAGA................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0
.......................................................................GAAGGAGAGGAAAGGTCAAGC................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0
..................................................................................................................CGCAAAGAGAGAGGGGAACGGG..................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................AATTGCGTAAAGGAATTTC.......................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
...........................................GTGCAAAGTGAGTGTGTCAGT............................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GAAAATTGCGTAAAGGAATTTCGCA....................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................ATTCAGTTCGTGTACGCTTACAACA................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................GATAGCAGCGGAGATTTACGTCA......................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
...............................................AAAGTGAGTGTGTCAGTGTGCGT....................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................................ATACCGAAACCAATTCCCGAA.................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0
.......................................................................GAAGGTCAGGAAAGGTCAA................................................................................................................................................................................................................................................................................... 19 2 2 0.50 1 0 0 1 0 0 0 0
......................................................................CGAAGGTCAGGAAAGGTCAA................................................................................................................................................................................................................................................................................... 20 2 2 0.50 1 0 0 1 0 0 0 0
................................................................................................................................................................................TCCCTGGTTGATCCTGCTAG......................................................................................................................................................................... 20 3 5 0.40 2 0 2 0 0 0 0 0
................................................................................................................................................................................TCCCTGGGTGATCCTGCCAG......................................................................................................................................................................... 20 3 6 0.33 2 0 2 0 0 0 0 0
................................................................................................................................................................................TACCTGGTTGATCCTGATAG......................................................................................................................................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0
............................................................................................................................ACGGGGAACGGGGAGTTA............................................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 1
................................................................................................................................................................................TACCTGGGTGATCCTGAAAG......................................................................................................................................................................... 20 3 6 0.17 1 0 1 0 0 0 0 0
.................................................................................................................................................................AGAAAAAATTTCGATTCCCT........................................................................................................................................................................................ 20 2 6 0.17 1 0 0 1 0 0 0 0
.......................................................................GAAGGTCAGGAAAGGTCA.................................................................................................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 1 0 0 0 0
................................................................................................................................................................AGAAAAAAATTTCGATTCCCT........................................................................................................................................................................................ 21 3 13 0.15 2 0 0 2 0 0 0 0
................................................................................................................................GGGCCGGGTAGTTACGTC........................................................................................................................................................................................................................... 18 3 16 0.06 1 0 0 0 0 0 0 1
.......................................................................GAAGGTCAGGAAAGGTCAAA.................................................................................................................................................................................................................................................................................. 20 3 17 0.06 1 0 0 1 0 0 0 0
...........................................................................................................................AAAGGGGAACGGGGAATAAC.............................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 1

Anti-sense strand reads

ATTTAATGTGGCGTGTGTGTTTGTATGTGTGTGGACATTTACACACGTTTCACTCACACAGTCACACGCAGCTTCCTCTCCTTTCCAGTTCGGCTTTTAACGCATTTCCTTAAAGCGTTTCTCTCTCCCCTTGCCCCTCAATGCAGTCAAAGCGTACGTGTTATTTGTTAAAGCTAAGGGACCCGCTAGGACTATCGGTTTTTTGCTATCGTCGCCTCTAAATGCAGTCAAGGCTATGGCTATGGATATGGCTTTGGTTAAGGGCTTTCTTAAGCTTTTTAGTCCGTTCTAAGTCAAGCACATGCGAATGTTGTCGAGGCGCGGGGTGCGGCGGAGGAGGATGGCGTGGCGGCAGCGGGGGAAAC
*************************************************************************************************************************************************..((.((.((.(((((((.......((..(((....(((.....(((((.(((....)))))))).............(((((((((......((((............))))......))))))))))))...))).....))......)))).))))).)).))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total V058
head
 M043
female body
.............................................................................................................................................................................................................................................................................................................................GGGGCGGGCTGCGGCGAAGGA........................... 21 3 4 0.25 1 1 0
..................................................................................................................................................................................................................................................................................................................................GGGGCGCGGTAGAGGAGGATG...................... 21 3 5 0.20 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 2L:834194-834558 - dya_188 TAAATTACACCGCACACACA------------AAC--ATACACACACCTGTAAAT-------------------------GT-GT--G---CAAA-GTGA---------GTGTGTCAGTGTGCGTC------------------------GAAGGAGAGGAAAGGTCAAGCCG---AAAATTGCGTAAAGGAAT---------------TTCG-C------AAAGA-G---AGAGG-GGA-ACGGGGAGTTACGTCAGTTTCGCATGCACAATAAACAATTT-CGATT-CC-CT--GG--------------------GCGATCCT-------------------------------------------------GATA----G----------------CCAAAAAACGATAGC--------------------------------------------------------------------------------------AGCGGA-GATTTACGTCAGTTC---------------CGATA-CCGATA-------CC---T---ATACCGAAACCAATT---CCCGAAAGA----------ATTCGAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droEre2 scaffold_4929:907148-907539 - der_1239 TAAATTACACCGCACACACA------------CACACACACACACACCTGTGAAT-------------------------GT-GT--G---CAAA-GTGA---------GTGTGTCAGTGTGCGTC------------------------GAAGGAGAGGAAAGGTCAAGCCG---AAAATTGCGTAAAGGAAT----------------TCG-A------AAAGATT---AGAGG-GGA-AAGGGGAGTTACGTCAGTTTCGCATAAACGATAAACAGCTT-CGATT-CC-CT--GT--------------------GCGATCCC-------------------------------------------------GATA----GGCAGCCAGAACGATAAGCAAAAAACGATAAC--------------------------------------------------------------------------------------AGCGGA-AATTAACGTCATTTTGGAGTAGAAAGCAGCCGATT-CCGATAT-------------------CGATATAAATT---CCCGAAAGA----------ATTCGAAAAATCAGACAAGATTCAGTTCGTGTACGTTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droSec2 scaffold_14:820984-821357 - TAAATCTCACCGCAC------------------------ACACACACCTGTGAGT-------------------------GT-GT--G---CAAA-GTGA---------GTGTGTGAGTGTGCGTC------------------------GAAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAGGAAAGGA--A-A----------GG-------AAAGCTAC----GGC-GA---CGGGGAGTTACGTCAGTTTCGCATTCCCGATAAACAATTT-AGATT-CC-CT--AA--------------------ACGATCCT-------------------------------------------------GATA----GCCAGCCATTACGATAGGCAAAAAACGATAAC--------------------------------------------------------------------------------------AGCGGA-GATTTACGTCAGTTTGGAGTAGAAAGTAAACGATA-CCGAT-------------------------ACCGATT---CCCGAAAGA----------ATTCAAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droSim2 2l:813199-813572 - TAAATCGCACCGCAC------------------------ACACACACCTGTGAGT-------------------------GT-GT--G---CAAA-GTGA---------GTGTGTGAGTGTGCGTC------------------------GAAGGAGAGGAAAGGTCAAGCAA---AAAATTGCGTAAAGGAAAGGA--A-A----------GG-------AAAGCTAC----GGC-GA---GGGGGAGTTACGTCAGTTTCGCATTCCCGATAAACAATTT-AGATT-CC-CT--AA--------------------ACGATCCT-------------------------------------------------GATA----GTCAGCCATTGCGATAGGCAAAAAACGATAAC--------------------------------------------------------------------------------------AGCGGA-GATTTGCGTCAGTTTGGAGTAGAAAGTAAACGATA-CCGAT-------------------------ACCGATT---CCCGAAAGA----------ATTCAAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCACCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
dm3 chr2L:850347-850722 - TAAATCGCACCGCAC------------------------ACACACACCTGTCAGT-------------------------GT-GA--GTGTCAAA-GTGA---------GTGTGTGAGTGTGCGTC------------------------GAAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAGAAAAGGA--A-A----------GG-------AAAGCTTAGAAGAGG-GGA--AGGGGAATTACGTCAGTTTCGCATTCCCGATAAAAATTTT-TGATT-CC-CT--AA--------------------ACGATCCT-------------------------------------------------GATA----GCCAGCCATTACGATAGGCAAAAAACGATAAC--------------------------------------------------------------------------------------AGCGGA-AATTTACGTCAATTTGGAGCAGAAAGTAAACGATA--------------------------------CCAATT---CCCGAAAGA----------ATTCAAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droEug1 scf7180000409554:1576610-1577073 - TAAATTATAGCGCACAC----------------------ACACACACCTGTAATT-------------------------TT-GT--G---CAAA-GTT--------GTGTGTGCGAGTGTGAGGC------------------------GAAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAGGGAA---------------GAG-GT------AACGA-G---AGAGC-GGA---AAGGAGTTACGTCAGTTACGTATAGACGATAAGCAATATCCGATTA-CTCA--GAACGTATTTCAATCCTTTACATTGATCTTAGTATGGAGA---------------------------------GTGAAG--TAT--TTG-------TACGATAAACAACAAGCGATATC-CA------------------ATCTACCAAATTCGAT--TCCCCTTTTCACTTTCGCTTGTAT--------------CCGAAAGAAGACCGA-GATTAACGTCAAATTCTAATATACGATATACGATATCCGATAA------------------CCGATTCCGATT---CATAAA-AT----------ATAAGGAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGTTCCGCGCCCCACGCCGCCTCCTCCTTCCGTACCGCCGTCGCCCCCTTTT
droBia1 scf7180000302261:2963481-2963900 + TAGGTTACGGCACAC------------------------GCACACACCTGTGATT-------------------------TC-GT--GAC-CAGA-GCG--------GTGTGTGTGAGTGTGAGGC------------------------GAAGGAGAGGAAAGGTCAAGCCG---AAAGTTGCGTAAAGAAGGGGA--AAAGGG--AAGA-GG-------AAAGA-G---AGAGC-GGA--GAGGGAGTTACGTCAGTTGCAAA-AAACGATAGGCAATAC-CGAT------------------------------------CTTAGACA-------------------------------------------GGATA----CCC-G--CTTGCGATAATCAATAACCGAAAGCAC---------------------CGA------TCCAA--TCCGATACACAATCCCGATTGTACTG---------------------AGCGGA-GATTCCCGTCACATTCGAGCCTGCGATAAGCAATCTCCGATAG------------------CCCATAAAGGTT---TTTGAAAAT----------ATAAGGAAAATCAGGCAAGATTCAGTTCGTGTACGCCTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTCG
droTak1 scf7180000415856:508819-509252 - TACATTACAGCACAC------------------------GCACACACCTGTGATT-------------------TTCTGTGT-GT--GTC-CA-A-GTG----TTGTGTGTGTGTGAGTGTGAGGC------------------------GAAGGAGAGGAAAGGTCAAGCCG---AAAATTGCGTAAAGAAAGGGGGAAGAGGA--GAGACG-A------AAAGA-G---AGAGC-GGA--AAGAGAGTTACGTCAGTTACAAAAAAACGATAAACAATTTCCGATTTAC-CA--AA--------------------TCGATCGA------------------------------------------------GGATA----TC-------TACGATAAACCGCA------------------------------ATCTAGAAAATTTCAT--TCCCATACAAAGTCTTGAT---ATTT---------------------ATCGGA-GTTTTACGTCAAATTCGATTAGGCGATAAGCAAAATCCGATAC------------------TCGATAACGATTTTTCGTTAA-AA----------ATAAGAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTTCCGCACCGCCGTCGCCCCCTTTG
droEle1 scf7180000490458:442347-442783 + TCAATCACAGCACAC------------------------ACACACACCTGTGATT-------------------CTCATTGTCGT--GTG-T--T-GTG--------GTGTGTGTGAGTGTGAG-C------------------------GAAGGAGAGGAAAGGTCAAGCTG---AAAATTGCGTAAAGTGGA---------------AGG-GGGACGAAAAAGA-G---AGAG---AAAACGAAGAGTTACGTCAATTACGAATAAACGATAAACAATATCCGATAA-CCCG--AAACCGCTTCCGATTCGTCATAACGATCGTGCAAAGGAGA---------------------------------ATAAAG--AAAAGTTG--------------------AA-----------GCGAAA-------------------------------------------CTTGAA---ATAA-----ATAAT-----AAAGAAAGCGGA-GATTTACGTCAAAAACAAAC-----AAAATCGATATTCGATAAC-----CC---CTTTAAACCGATTTCGATA---CCTGAA-AA----------ATCAGGAAAATCAGGCAAGATTCAGTTCGTTTACGTTTACAACGGTACCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droRho1 scf7180000769144:103110-103605 + TCAATTACAGAACAC------------------------ACACACACCTGTGACT-------------------------TTCGT--GTG-T--A-GTA--------GTGTGTGTGAGTGTGAG-C------------------------GAAGGAGAGGAAAGGTCAAGACG---AAAATTGCGTAAAGTGGA---------------AAG-GGTACGGAAGAGC-G---AGAG-------CGAAGAGTTACGTCAATTACGTACAAGCGATAAATAATATCCGATAA-CTGG--CGACCGCTTCCGATTTCTTATATCGATCGTGCAAAGGAGATAAAAGGAAGAGGTCAAGGCAAAATTAACGTCAGTTACG--TAT----T-------CATGATAAAAAATAAGAGAAAT-AC--------------------------------CATAAT-CCATAAACAATCTCGATTGTGCTAAGCGGAAAGTCGCGGAAAGAGAGCGGA-GATTTACGTCAAGTACGA--------AAAACGATATCAGATAAC-----CC---T---TTACCGATTTCGATT---CCTGAA-AA----------ATCAGGAAAATCAGGCAAGATTCAGTTCGTCTACGTTTACAACGGTACCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droFic1 scf7180000453904:1120997-1121409 - TCCATTACAGCGCA--------------------------CACACACCTGTGAAC-------------------------TT-GT--GTG-C--A-GTG--------GTGTGTGTGAGTGTGCGAC------------------------AAAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAAAGGA--------------------------------------GTG--GGA-AAGGAGAGTTACGTCAGTTACGAATATCCGATAAATAATATCCGATAA-CCCG--AAACCTATTAAGACAGCTCCTATCGATCGTGAAAAGAGGA---------------------------------A--------------G--------------------AC-----------GCGTAGCTGGAAAGGATA-----------------------TATCCAATCTTGCTTCTGCTAAGCAAAAAATC------------TGGAGGATTTCTGTCAAAT---AATTTACCATAAACGACACATGATAA------------------CCGATTCCGTTT---CCTGAT-AA----------ATCAGGAAAATCAGGCAAGATTCAGTTCGTGTACGTTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droKik1 scf7180000301725:158446-158709 + TCAATTAC---------------------------------------C-----------------------------ATTGT-GCTTGTG-T--GAGTGC---------GCGCTTGAGTGTGTG-CGA--------------------GGCAAGGAGAGGAAAGGTCAAGCCGTGGAAAGTTGCGTAAAGAGAAGGA-------------------------------------GGCA-A-AAAGAGAGTTACGTCAGTTAAGC--TCG------GCATTATCCGTTAT-CCGACGTATCCGT------------ATCTCGATCGT-------------------------------------------------G-----------------------------------------------------------------------------------------------------CGT--------------------------------------------------------------------------------------------------------------------------AGCCGTAAAAAGCAGGCAAAATTCAGTTCGTTTACGTTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCGTTTG
droAna3 scaffold_12916:2739961-2740286 - CGTATTCCAGCAAAA--ATA------------AAC----ACAAACACTTGTTTGTTGCTATTGCTATTACTGTTCCTGTTGTTGTTGGTG-T--G-GTGT---------GTGCGTGCGTGTGTGTG-AGAA----GAAGAGGAGGG--GGCAAGGAGAGGAAAGGTCAAGCCG---AAAGTTGCGCAAAAAGACGGGGCAG--------------------------G---CCAG-------CGGAGAGTTACGTCAGTTACAT--TACGGAT----ATTATCCGAT---C-CA--A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGATCT-----------GATCGTTTGAAGCGTGACCCG-GAAAGCCAGCAACATTCAGTTCGTCTACGTTTACAACAGTTCCGCGCCCCACGCTGCCTCCTCGTACCGCTCCGCCGTCGCCCCCTTCG
droBip1 scf7180000396737:2024391-2024738 + CGTATTCCAGCAAA---GTAAACACACTCGCAAAC----ACACACACTTGTTTGTTGCTGTTG----TGCTG--TGC----T-GT--GTG-T--A-GTGAGTGGT--GTGTGCGTGCGTGTGTGAC-AGAAAGCGGAGAAGGAGGGCAGGCAAGGAGAGGAAAGGTCAAGCCG---AAAGTTGCGTAAAAAGACGAGCCAG--GCCAGGCCAGG-------CCAGA-G---AAACT-AG---CAGAGAGTTACGTCAGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATTA---------------CGGATA-------GCATCC---GATCC----------------GATCGTTTGAAGCGCGACCCCAAAAATCCATCAACATTCAGTTCGTCTACGTTTACAACAGCTCCGCGCCCCACGCTGCCTCCTCGTACCGCTCCGCCGTCGCCCCCTTTG
dp5 4_group3:5642090-5642227 - A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTTACGTCAGTCTCAATCTCTGGATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------C---GTGCC----------------GAGCGT----------TGGCTGCAAATCAGGCAAAATTCAGTTCGTTTACGTCTACAACAGCTCCGTCCCCCACGTCGCGGATTCCTACCGCACGGCCGTCGCCCCCTACG
droPer2 scaffold_1:7133032-7133169 - A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTTACGTCAGTCTCAATCTCTGGATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------C---GTGCC----------------GAGCGT----------TGGCTGCAAATCAGGCAAAATTCAGTTCGTTTACGTCTACAACAGCTCCGTCCCCCACGTCGCGGATTCCTACCGCACGGCCGTCGCCCCCTACG
droWil2 scf2_1100000004585:2290961-2291048 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCAGTCAAAATTCAGTTCGTTTACGTTTATAACAGCGCCGCCCCCCACGCTGCTGACAAATATCGGTCCGCTGTTGCACCCTACG
droVir3 scaffold_12963:19397806-19397883 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCAGGCAAAATTCAGTTCGTCTACGTTTACAACAGCAGTGTCCCACACGCGGCTGACATCTATC----------AGCCTCATTCA
droMoj3 scaffold_6500:23816585-23816657 + C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTAAATCAGGCAAAATTCAGTTCGTTTACGTTTACAACAGCAGCGCTCCACACGCGGCCGACATTTATCAG-------------------
droGri2 scaffold_14853:7265006-7265078 - TAGGCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATAATTATAGCGCGATAG----------------------------------------------------------------------------------------------------------------------AGCTACCGATA-CCAATAC-CGATACC---C---ATACCGATAGCGATA---CC----------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TAAATTACACCGCACACACA------------AAC--ATACACACACCTGTAAAT-------------------------GT-GT--G---CAAA-GTGA---------GTGTGTCAGTGTGCGTC------------------------GAAGGAGAGGAAAGGTCAAGCCG---AAAATTGCGTAAAGGAAT---------------TTCG-C------AAAGA-G---AGAGG-GGA-ACGGGGAGTTACGTCAGTTTCGCATGCACAATAAACAATTT-CGATT-CC-CT--GG--------------------GCGATCCT-------------------------------------------------GATA----G----------------CCAAAAAACGATAGC--------------------------------------------------------------------------------------AGCGGA-GATTTACGTCAGTTC---------------CGATA-CCGATA-------CC---T---ATACCGAAACCAATT---CCCGAAAGA----------ATTCGAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................G---CAAA-GTGA---------GTGTGTCAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.00402000020000
.....................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------GATA----G----------------CCAAAAAACGATAGC--------------------------------------------------------------------------------------AGCGGA-GAT...........................................................................................................................................................................................3012.00200000000002
......................................................T-------------------------GT-GT--G---CAAA-GTGA---------GTGTGTCAGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................G----------------CCAAAAAACGATAGC--------------------------------------------------------------------------------------AGCGGA-..............................................................................................................................................................................................2211.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAACGATAGC--------------------------------------------------------------------------------------AGCGGA-..............................................................................................................................................................................................1911.00100100000000
.............................................................................................................GTGTGTCAGTGTGCGTC------------------------GAAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGAAAAATCAGGCAAGATT.........................................................................2211.00100000010000
.....................................................................................................................GTGTGCGTC------------------------GAAGGAGAGGAAAGGTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.......................................................................................................................GTGCGTC------------------------GAAGGAGAGGAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...............................................................................................................................................................GAAAGGTCAAGCCG---AAAATTGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.................................................GTAAAT-------------------------GT-GT--G---CAAA-GTGA---------GTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTACGTCAGTTC---------------CGATA-CCGA......................................................................................................................................................2411.00100100000000
..............................................................................................................................................................................................................................................................................................TT-CC-CT--GG--------------------GCGATCCT-------------------------------------------------GATA----G----------------CCA.......................................................................................................................................................................................................................................................................................................2411.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAAAATCAGGCAAGATTCA.......................................................................2311.00100000010000
..........................................CACACCTGTAAAT-------------------------GT-GT--G---CAAA-GTGA---------GTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
.............................................................................................................................C------------------------GAAGGAGAGGAAAGGTCAAGCCG---AA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.....................................................AT-------------------------GT-GT--G---CAAA-GTGA---------GTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
....................................................AAT-------------------------GT-GT--G---CAAA-GTGA---------GTGTGTCAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.........................................................................................................................................................................................TAAAGGAAT---------------TTCG-C------AAAGA-G---A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
......................................................................................................................................................GAAGGAGAGGAAAGGTCAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000
...................................................................................................................................................................................................................CG-C------AAAGA-G---AGAGG-GGA-ACGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..................................................................................................................................................................................AATTGCGTAAAGGAAT---------------TTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
...................................................................................GT--G---CAAA-GTGA---------GTGTGTCAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
............................................................................................................................................................................G---AAAATTGCGTAAAGGAAT---------------TTCG-C------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGTTCGTGTACGCTTACAACA...................................................2511.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GATAGC--------------------------------------------------------------------------------------AGCGGA-GATTTACGTCA...................................................................................................................................................................................2311.00100000010000
............................................................................................AAA-GTGA---------GTGTGTCAGTGTGCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCGAAACCAATT---CCCGAA............................................................................................................2111.00100100000000
droEre2
TAAATTACACCGCACACACA------------CACACACACACACACCTGTGAAT-------------------------GT-GT--G---CAAA-GTGA---------GTGTGTCAGTGTGCGTC------------------------GAAGGAGAGGAAAGGTCAAGCCG---AAAATTGCGTAAAGGAAT----------------TCG-A------AAAGATT---AGAGG-GGA-AAGGGGAGTTACGTCAGTTTCGCATAAACGATAAACAGCTT-CGATT-CC-CT--GT--------------------GCGATCCC-------------------------------------------------GATA----GGCAGCCAGAACGATAAGCAAAAAACGATAAC--------------------------------------------------------------------------------------AGCGGA-AATTAACGTCATTTTGGAGTAGAAAGCAGCCGATT-CCGATAT-------------------CGATATAAATT---CCCGAAAGA----------ATTCGAAAAATCAGACAAGATTCAGTTCGTGTACGTTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................GCTT-CGATT-CC-CT--GT--------------------GCGATCCC-------------------------------------------------...................................................................................................................................................................................................................................................................................................................................2312.0022000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAACGTCATTTTGGAGT..........................................................................................................................................................................2012.0020000200
.................................................................................................................................................................................................................................................................................................CC-CT--GT--------------------GCGATCCC-------------------------------------------------GATA----GGCAGCC....................................................................................................................................................................................................................................................................................................................2511.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGTTCGTGTACGTTTA........................................................2111.0011000000
...............................................................................................................................................................................................................................................................................................T-CC-CT--GT--------------------GCGATCCC-------------------------------------------------GATA----GGC........................................................................................................................................................................................................................................................................................................................2211.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAAAGCAGCCGATT-CCGA......................................................................................................................................................2111.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................AACGATAAC--------------------------------------------------------------------------------------AGCGGA-AATTAACGTCA...................................................................................................................................................................................2611.0010000010
.................................................................................................................................................................................................................................ATT---AGAGG-GGA-AAGGGGAGTTACGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
...................................................................................GT--G---CAAA-GTGA---------GTGTGTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...................................................................................................................................................................................................................CG-A------AAAGATT---AGAGG-GGA-AAGGGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCAGACAAGATTCAGTTCGT.................................................................2311.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATTTTGGAGTAGAAAGCAGC................................................................................................................................................................2311.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATCAGACAAGATTCAGTTCGT.................................................................2411.0010000010
.................................................................................................TGA---------GTGTGTCAGTGTGCGTC------------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...................................................................................................................................................................................................................................T---AGAGG-GGA-AAGGGGAGTTACGTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..............................................................................................................TGTGTCAGTGTGCGTC------------------------GAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
............................................CACCTGTGAAT-------------------------GT-GT--G---CAAA-GTGA---------GT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
...............................................................................................................GTGTCAGTGTGCGTC------------------------GAAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.......................................................................................................................................................................................................................................................................................CTT-CGATT-CC-CT--GT--------------------GCGATCC.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
..............................................................................................................................................................................................................................................................................GATAAACAGCTT-CGATT-CC-CT--..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.................................................................................................................GTCAGTGTGCGTC------------------------GAAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAAAGCAGCCGATT-CCGATAT-------------------C...............................................................................................................................2511.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGACAAGATTCAGTTCGTGTACGTT..........................................................2911.0010000100
................................................TGTGAAT-------------------------GT-GT--G---CAAA-GTGA---------GTGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
.................................................................................................TGA---------GTGTGTCAGTGTGCGTC------------------------GA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGACAAGATTCAGTTCGT.................................................................2211.0010000100
................................................................................GT-GT--G---CAAA-GTGA---------GTGTGTCAGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
................................................................................................................................................................................................................................................................................TAAACAGCTT-CGATT-CC-CT--GT--------------------GCGAT.......................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAGCAGCCGATT-CCGATAT-------------------C...............................................................................................................................2411.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAAAGCAGCCGATT-CC........................................................................................................................................................1911.0010000100
...................................................................................GT--G---CAAA-GTGA---------GTGTGTCAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.......................................................................................G---CAAA-GTGA---------GTGTGTCAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGACAAGATTCAGTTCGTGTACGT...........................................................2711.0010000100
.............................................................................................................................................................................................................................AAAGATT---AGAGG-GGA-AAGGGGAGTTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
droSec2
TAAATCTCACCGCAC------------------------ACACACACCTGTGAGT-------------------------GT-GT--G---CAAA-GTGA---------GTGTGTGAGTGTGCGTC------------------------GAAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAGGAAAGGA--A-A----------GG-------AAAGCTAC----GGC-GA---CGGGGAGTTACGTCAGTTTCGCATTCCCGATAAACAATTT-AGATT-CC-CT--AA--------------------ACGATCCT-------------------------------------------------GATA----GCCAGCCATTACGATAGGCAAAAAACGATAAC--------------------------------------------------------------------------------------AGCGGA-GATTTACGTCAGTTTGGAGTAGAAAGTAAACGATA-CCGAT-------------------------ACCGATT---CCCGAAAGA----------ATTCAAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................G---CAAA-GTGA---------GTGTGTGAGTGTGCGTC------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.............................................................................................................................................................................................................................AAAGCTAC----GGC-GA---CGGGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGTTCGTGTACGCT..........................................................1811.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGTTCGTGTACGCTTACAAC....................................................2411.0011000
.............................................................................................................................................................................................................................................................................................ATT-CC-CT--AA--------------------ACGATCCT-------------------------------------------------GATA----...........................................................................................................................................................................................................................................................................................................................2111.0010010
...................................................................................................................GAGTGTGCGTC------------------------GAAGGAGAGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATA-CCGAT-------------------------ACCGAT......................................................................................................................1811.0010010
......................................................................................................................TGTGCGTC------------------------GAAGGAGAGGAAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAAAACGATAAC--------------------------------------------------------------------------------------AGCGGA-G.............................................................................................................................................................................................2211.0011000
.............................................................................................................................................................................................................................AAAGCTAC----GGC-GA---CGGGGAGTTACGTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
.........................................................................................................................................................................................................................................................................................................A--------------------ACGATCCT-------------------------------------------------GATA----GCCAGCC....................................................................................................................................................................................................................................................................................................................2011.0010010
....................................................................................................................................................................................................A--A-A----------GG-------AAAGCTAC----GGC-GA---CGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
............................................CACCTGTGAGT-------------------------GT-GT--G---CAAA-GTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
..........................................................................................................................CGTC------------------------GAAGGAGAGGAAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.............................................................................................AA-GTGA---------GTGTGTGAGTGTGCGTC------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
..............................................................................................A-GTGA---------GTGTGTGAGTGTGCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..........................................................................................................................................................GAGAGGAAAGGTCAAGCCA---AAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGCAAGATTCAGTTCGTGTACG............................................................2611.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................AAC--------------------------------------------------------------------------------------AGCGGA-GATTTACGTC....................................................................................................................................................................................1911.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATAAC--------------------------------------------------------------------------------------AGCGGA-GATTTACG......................................................................................................................................................................................1911.0010010
................................................................................GT-GT--G---CAAA-GTGA---------GTGTGTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..............................................................................................................................................................................................................................................................................................TT-CC-CT--AA--------------------ACGATCCT-------------------------------------------------GATA----GCCAGCC....................................................................................................................................................................................................................................................................................................................2711.0010010
...................................................................................................A---------GTGTGTGAGTGTGCGTC------------------------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310100
droSim2
TAAATCGCACCGCAC------------------------ACACACACCTGTGAGT-------------------------GT-GT--G---CAAA-GTGA---------GTGTGTGAGTGTGCGTC------------------------GAAGGAGAGGAAAGGTCAAGCAA---AAAATTGCGTAAAGGAAAGGA--A-A----------GG-------AAAGCTAC----GGC-GA---GGGGGAGTTACGTCAGTTTCGCATTCCCGATAAACAATTT-AGATT-CC-CT--AA--------------------ACGATCCT-------------------------------------------------GATA----GTCAGCCATTGCGATAGGCAAAAAACGATAAC--------------------------------------------------------------------------------------AGCGGA-GATTTGCGTCAGTTTGGAGTAGAAAGTAAACGATA-CCGAT-------------------------ACCGATT---CCCGAAAGA----------ATTCAAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCACCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGCGTCAGTTTGGA............................................................................................................................................................................1814.00400400000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAGTAGAAAGTAAAC...............................................................................................................................................................1812.00200200000000000000
.....................................................................................................................................................................................................................G-------AAAGCTAC----GGC-GA---GG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1612.00200000002000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGTTCGTGTACGC...........................................................1812.00200200000000000000
.......................................ACACACACCTGTGAGT-------------------------GT-G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCAAGATTCAGTTCGTGTA..............................................................2311.00100010000000000000
.................................................................................................................................................................................................AGGA--A-A----------GG-------AAAGCTAC----GGC-GA---GGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.........................................................................................................................................................................................TAAAGGAAAGGA--A-A----------GG-------AAAGCTAC----GG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCAAGATTCAGTTCGTGTACGCT..........................................................2711.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTCAGTTTGGAGTAGAAAGT...................................................................................................................................................................2311.00100000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTTGGAGTAGAAAGT...................................................................................................................................................................1811.00100000000000100000
...............................................................................................................GTGTGAGTGTGCGTC------------------------GAAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GATAAC--------------------------------------------------------------------------------------AGCGGA-GATTTGCGTCA...................................................................................................................................................................................2311.00100000000000100000
.................................................GTGAGT-------------------------GT-GT--G---CAAA-GTGA---------GTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................AAC--------------------------------------------------------------------------------------AGCGGA-GATTTGCGTC....................................................................................................................................................................................1911.00100000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGTTCGTGTACGCC..........................................................1811.00100100000000000000
...............................................................................................................GTGTGAGTGTGCGTC------------------------GAAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATA-CCGAT-------------------------ACCGATT---..................................................................................................................1911.00100000000000100000
.....................................................................................................................................................................TCAAGCAA---AAAATTGCGTAAAGGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CGATAGGCAAAAAACGATAAC--------------------------------------------------------------------------------------AGC..................................................................................................................................................................................................2411.00100010000000000000
.............................................................................................................GTGTGTGAGTGTGCGTC------------------------GAAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
............................................CACCTGTGAGT-------------------------GT-GT--G---CAAA-GTGA---------GTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAAAGTAAACGATA-CC........................................................................................................................................................1911.00100100000000000000
...................................................................................................................GAGTGTGCGTC------------------------GAAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------ATTCAAAAAATCAGGCAAG............................................................................2011.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CCGAT-------------------------ACCGATT---CCCGAAAG..........................................................................................................2111.00100000000000100000
.................................................................................................................GTGAGTGTGCGTC------------------------GAAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
..........................................................................................................................................................GAGAGGAAAGGTCAAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000100000000
..............................................................................................................TGTGTGAGTGTGCGTC------------------------GA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
.....................................................................................................................GTGTGCGTC------------------------GAAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15120.08100000000010000000
..........................................................................................................................................................................................AAAGGAAAGGA--A-A----------GG-------AA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
dm3
TAAATCGCACCGCAC------------------------ACACACACCTGTCAGT-------------------------GT-GA--GTGTCAAA-GTGA---------GTGTGTGAGTGTGCGTC------------------------GAAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAGAAAAGGA--A-A----------GG-------AAAGCTTAGAAGAGG-GGA--AGGGGAATTACGTCAGTTTCGCATTCCCGATAAAAATTTT-TGATT-CC-CT--AA--------------------ACGATCCT-------------------------------------------------GATA----GCCAGCCATTACGATAGGCAAAAAACGATAAC--------------------------------------------------------------------------------------AGCGGA-AATTTACGTCAATTTGGAGCAGAAAGTAAACGATA--------------------------------CCAATT---CCCGAAAGA----------ATTCAAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
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...........................................................................................CAAA-GTGA---------GTGTGTGAGTGTGCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................GT-GA--GTGTCAAA-GTGA---------GT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CCTGTCAGT-------------------------GT-GA--GTGTCAAA-GT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AAAGGTCAAGCCA---AAAATTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGAGCAGAAAGTAAA................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................GAGGAAAGGTCAAGCCA---A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................GTGTGTGAGTGTGCGTC------------------------GAAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................ATTACGATAGGCAAAAAACGATAAC--------------------------------------------------------------------------------------.....................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AAAGGTCAAGCCA---AAAATTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAGCTCCGCGCCCCACGCCGCC...............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAAGTAAACGATA--------------------------------CCAATT---CCCGA.............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GTCAGTTTCGCATTCCCGATA........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................AA-GTGA---------GTGTGTGAGTGTGCGTC------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................GTCAAGCCA---AAAATTGCGTAAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATAAC--------------------------------------------------------------------------------------AGCGGA-AATTTACGTC....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................GAGTGTGCGTC------------------------GAAGGAGAGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................AAAGCTTAGAAGAGG-GGA--AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TACGATAGGCAAAAAACGA...............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GAGTGTGCGTC------------------------GAAGGAGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AGGCAAAAAACGATAAC--------------------------------------------------------------------------------------AGCGG................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGATA--------------------------------CCAATT---CCCGAAC...........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................GGTCAAGCCA---AAAATTGCGTAAAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTTCGTGTACGCTTACA......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................GAGTGTGCGTC------------------------GAAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TGATT-CC-CT--AA--------------------ACGATCCT-------------------------------------------------GATA----GCC........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................................GAGG-GGA--AGGGGAATTACGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.......................................................................................................................................................................................................................................................AATTACGTCAGTTTCGCATTCCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AAA-GTGA---------GTGTGTGAGTGTGCGTC------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGTCAATTTGGAGCAGAAAGT...................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................................................................................................................................................................................................................................................................................................ATTACGATAGGCAAAAAACG................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTCAATTTGGAGCAGA.......................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................AGAAGAGG-GGA--AGGGGAATTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AGT-------------------------GT-GA--GTGTCAAA-GTGA---------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCGTGTACGCTTACAACAGCTCCGCG...........................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................T-GA--GTGTCAAA-GTGA---------GTGTGTGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GTCAGTTTCGCATTCCCGATAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................GTGAGTGTGCGTC------------------------GAAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TACGATAGGCAAAAAACGATAAC--------------------------------------------------------------------------------------AGCGGA-..............................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AGCCA---AAAATTGCGTAAAGAAAAGGA--...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAATCAGGCAAGATTCAGTTCGT.................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................GGAAAGGTCAAGCCA---AAAATTGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CACCTGTCAGT-------------------------GT-GA--GTGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................GAAAGGTCAAGCCA---AAAATTGCGTAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
TAAATTATAGCGCACAC----------------------ACACACACCTGTAATT-------------------------TT-GT--G---CAAA-GTT--------GTGTGTGCGAGTGTGAGGC------------------------GAAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAGGGAA---------------GAG-GT------AACGA-G---AGAGC-GGA---AAGGAGTTACGTCAGTTACGTATAGACGATAAGCAATATCCGATTA-CTCA--GAACGTATTTCAATCCTTTACATTGATCTTAGTATGGAGA---------------------------------GTGAAG--TAT--TTG-------TACGATAAACAACAAGCGATATC-CA------------------ATCTACCAAATTCGAT--TCCCCTTTTCACTTTCGCTTGTAT--------------CCGAAAGAAGACCGA-GATTAACGTCAAATTCTAATATACGATATACGATATCCGATAA------------------CCGATTCCGATT---CATAAA-AT----------ATAAGGAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGTTCCGCGCCCCACGCCGCCTCCTCCTTCCGTACCGCCGTCGCCCCCTTTTSizeHit CountTotal NormTotal
No Reads
droBia1
TAGGTTACGGCACAC------------------------GCACACACCTGTGATT-------------------------TC-GT--GAC-CAGA-GCG--------GTGTGTGTGAGTGTGAGGC------------------------GAAGGAGAGGAAAGGTCAAGCCG---AAAGTTGCGTAAAGAAGGGGA--AAAGGG--AAGA-GG-------AAAGA-G---AGAGC-GGA--GAGGGAGTTACGTCAGTTGCAAA-AAACGATAGGCAATAC-CGAT------------------------------------CTTAGACA-------------------------------------------GGATA----CCC-G--CTTGCGATAATCAATAACCGAAAGCAC---------------------CGA------TCCAA--TCCGATACACAATCCCGATTGTACTG---------------------AGCGGA-GATTCCCGTCACATTCGAGCCTGCGATAAGCAATCTCCGATAG------------------CCCATAAAGGTT---TTTGAAAAT----------ATAAGGAAAATCAGGCAAGATTCAGTTCGTGTACGCCTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTCGSizeHit CountTotal NormTotal
No Reads
droTak1
TACATTACAGCACAC------------------------GCACACACCTGTGATT-------------------TTCTGTGT-GT--GTC-CA-A-GTG----TTGTGTGTGTGTGAGTGTGAGGC------------------------GAAGGAGAGGAAAGGTCAAGCCG---AAAATTGCGTAAAGAAAGGGGGAAGAGGA--GAGACG-A------AAAGA-G---AGAGC-GGA--AAGAGAGTTACGTCAGTTACAAAAAAACGATAAACAATTTCCGATTTAC-CA--AA--------------------TCGATCGA------------------------------------------------GGATA----TC-------TACGATAAACCGCA------------------------------ATCTAGAAAATTTCAT--TCCCATACAAAGTCTTGAT---ATTT---------------------ATCGGA-GTTTTACGTCAAATTCGATTAGGCGATAAGCAAAATCCGATAC------------------TCGATAACGATTTTTCGTTAA-AA----------ATAAGAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTTCCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotal
No Reads
droEle1
TCAATCACAGCACAC------------------------ACACACACCTGTGATT-------------------CTCATTGTCGT--GTG-T--T-GTG--------GTGTGTGTGAGTGTGAG-C------------------------GAAGGAGAGGAAAGGTCAAGCTG---AAAATTGCGTAAAGTGGA---------------AGG-GGGACGAAAAAGA-G---AGAG---AAAACGAAGAGTTACGTCAATTACGAATAAACGATAAACAATATCCGATAA-CCCG--AAACCGCTTCCGATTCGTCATAACGATCGTGCAAAGGAGA---------------------------------ATAAAG--AAAAGTTG--------------------AA-----------GCGAAA-------------------------------------------CTTGAA---ATAA-----ATAAT-----AAAGAAAGCGGA-GATTTACGTCAAAAACAAAC-----AAAATCGATATTCGATAAC-----CC---CTTTAAACCGATTTCGATA---CCTGAA-AA----------ATCAGGAAAATCAGGCAAGATTCAGTTCGTTTACGTTTACAACGGTACCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotal
No Reads
droRho1
TCAATTACAGAACAC------------------------ACACACACCTGTGACT-------------------------TTCGT--GTG-T--A-GTA--------GTGTGTGTGAGTGTGAG-C------------------------GAAGGAGAGGAAAGGTCAAGACG---AAAATTGCGTAAAGTGGA---------------AAG-GGTACGGAAGAGC-G---AGAG-------CGAAGAGTTACGTCAATTACGTACAAGCGATAAATAATATCCGATAA-CTGG--CGACCGCTTCCGATTTCTTATATCGATCGTGCAAAGGAGATAAAAGGAAGAGGTCAAGGCAAAATTAACGTCAGTTACG--TAT----T-------CATGATAAAAAATAAGAGAAAT-AC--------------------------------CATAAT-CCATAAACAATCTCGATTGTGCTAAGCGGAAAGTCGCGGAAAGAGAGCGGA-GATTTACGTCAAGTACGA--------AAAACGATATCAGATAAC-----CC---T---TTACCGATTTCGATT---CCTGAA-AA----------ATCAGGAAAATCAGGCAAGATTCAGTTCGTCTACGTTTACAACGGTACCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotal
No Reads
droFic1
TCCATTACAGCGCA--------------------------CACACACCTGTGAAC-------------------------TT-GT--GTG-C--A-GTG--------GTGTGTGTGAGTGTGCGAC------------------------AAAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAAAGGA--------------------------------------GTG--GGA-AAGGAGAGTTACGTCAGTTACGAATATCCGATAAATAATATCCGATAA-CCCG--AAACCTATTAAGACAGCTCCTATCGATCGTGAAAAGAGGA---------------------------------A--------------G--------------------AC-----------GCGTAGCTGGAAAGGATA-----------------------TATCCAATCTTGCTTCTGCTAAGCAAAAAATC------------TGGAGGATTTCTGTCAAAT---AATTTACCATAAACGACACATGATAA------------------CCGATTCCGTTT---CCTGAT-AA----------ATCAGGAAAATCAGGCAAGATTCAGTTCGTGTACGTTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotal
No Reads
droKik1
TCAATTAC---------------------------------------C-----------------------------ATTGT-GCTTGTG-T--GAGTGC---------GCGCTTGAGTGTGTG-CGA--------------------GGCAAGGAGAGGAAAGGTCAAGCCGTGGAAAGTTGCGTAAAGAGAAGGA-------------------------------------GGCA-A-AAAGAGAGTTACGTCAGTTAAGC--TCG------GCATTATCCGTTAT-CCGACGTATCCGT------------ATCTCGATCGT-------------------------------------------------G-----------------------------------------------------------------------------------------------------CGT--------------------------------------------------------------------------------------------------------------------------AGCCGTAAAAAGCAGGCAAAATTCAGTTCGTTTACGTTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCGTTTGSizeHit CountTotal NormTotal
No Reads
droAna3
CGTATTCCAGCAAAA--ATA------------AAC----ACAAACACTTGTTTGTTGCTATTGCTATTACTGTTCCTGTTGTTGTTGGTG-T--G-GTGT---------GTGCGTGCGTGTGTGTG-AGAA----GAAGAGGAGGG--GGCAAGGAGAGGAAAGGTCAAGCCG---AAAGTTGCGCAAAAAGACGGGGCAG--------------------------G---CCAG-------CGGAGAGTTACGTCAGTTACAT--TACGGAT----ATTATCCGAT---C-CA--A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGATCT-----------GATCGTTTGAAGCGTGACCCG-GAAAGCCAGCAACATTCAGTTCGTCTACGTTTACAACAGTTCCGCGCCCCACGCTGCCTCCTCGTACCGCTCCGCCGTCGCCCCCTTCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACCGCTCCGCCGTCGCCCC.....2212.002000002
...............................................................................................................................................................................................................................................................................AT----ATTATCCGAT---C-CA--A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCC...............................................................................................................................1911.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAGCAACATTCAGTTCGT.................................................................2111.001100000
................................................................................GTTGTTGGTG-T--G-GTGT---------GT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCTCCTCGTACCGCTCCGCCGT...........2511.001000001
..........................................................................................................................................GAGGAGGG--GGCAAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGCCGTCGCCCCCTT..1911.001100000
.........................................................................................................................GTGTG-AGAA----GAAGAGGAGGG--......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...................................................................................................................................................................................GTTGCGCAAAAAGACGGGGCAG--------------------------G---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................................................................................................................................................................................ACGGGGCAG--------------------------G---CCAG-------CGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........................................................................................................................................................................................................G--------------------------G---CCAG-------CGGAGAGTTACGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..............................................................................................G-GTGT---------GTGCGTGCGTGTGTGTG-AG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
................................................................................GTTGTTGGTG-T--G-GTGT---------GTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.................................................................................................................................................G--GGCAAGGAGAGGAAAGGTCAAGCCG---A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....................................................................................................................GTGTGTGTG-AGAA----GAAGAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................................................................................................................CGCAAAAAGACGGGGCAG--------------------------G---C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.............................................................................................................................................................................................AAGACGGGGCAG--------------------------G---CCAG-------CGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.......................................................TGCTATTGCTATTACTGTTCCTGTTGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...........................................................................................................................................................AGAGGAAAGGTCAAGCCG---AAAGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......................................................................................GTG-T--G-GTGT---------GTGCGTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
................................................................................................GTGT---------GTGCGTGCGTGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.251100000
droBip1
CGTATTCCAGCAAA---GTAAACACACTCGCAAAC----ACACACACTTGTTTGTTGCTGTTG----TGCTG--TGC----T-GT--GTG-T--A-GTGAGTGGT--GTGTGCGTGCGTGTGTGAC-AGAAAGCGGAGAAGGAGGGCAGGCAAGGAGAGGAAAGGTCAAGCCG---AAAGTTGCGTAAAAAGACGAGCCAG--GCCAGGCCAGG-------CCAGA-G---AAACT-AG---CAGAGAGTTACGTCAGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATTA---------------CGGATA-------GCATCC---GATCC----------------GATCGTTTGAAGCGCGACCCCAAAAATCCATCAACATTCAGTTCGTCTACGTTTACAACAGCTCCGCGCCCCACGCTGCCTCCTCGTACCGCTCCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotal
No Reads
dp5
A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTTACGTCAGTCTCAATCTCTGGATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------C---GTGCC----------------GAGCGT----------TGGCTGCAAATCAGGCAAAATTCAGTTCGTTTACGTCTACAACAGCTCCGTCCCCCACGTCGCGGATTCCTACCGCACGGCCGTCGCCCCCTACGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCC----------------GAGCGT----------TGGCTGCAAATCAGG................................................................................2511.0010100000000
...................................................................................................................................................................................................................................................................CTCAATCTCTGGATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------C---GT..................................................................................................................................2011.0010100000000
....................................................................................................................................................................................................................................................................TCAATCTCTGGATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------C---GTGC................................................................................................................................2111.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCCCACGTCGCGGATT...........................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTACAACAGCTCCGTCCC.........................................2111.0010000001000
...................................................................................................................................................................................................................................................................CTCAATCTCTGGATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------C---GTGCC----------------GAGC...........................................................................................................2711.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTCCGTCCCCCACGTCGCGGATT...........................2711.0010001000000
...............................................................................................................................................................................................................................................................................ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------C---GTGCC----------------GAGCGT----------T..............................................................................................1811.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC---------------------------------------------------------------------------------------------------------C---GTGCC----------------GAGCGT----------TGGCTGCA.......................................................................................2211.0010100000000
droPer2
A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTTACGTCAGTCTCAATCTCTGGATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------C---GTGCC----------------GAGCGT----------TGGCTGCAAATCAGGCAAAATTCAGTTCGTTTACGTCTACAACAGCTCCGTCCCCCACGTCGCGGATTCCTACCGCACGGCCGTCGCCCCCTACGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCCCACGTCGCGGATTCCTACCG....................2611.001000100
...............................................................................................................................................................................................................................................................................ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------C---GTGCC----------------GAGCGT----------TGGCTG.........................................................................................2311.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCCTACCGCACGGCCGT...........2011.001001000
droWil2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCAGTCAAAATTCAGTTCGTTTACGTTTATAACAGCGCCGCCCCCCACGCTGCTGACAAATATCGGTCCGCTGTTGCACCCTACGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGTCCGCTGTTGCAC......1815.00550000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAATATCGGTCCGCTGTTG.........2212.00200200
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACAGCGCCGCCCCCCACGCTG.................................2411.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTCCGCTGTTGCACC.....1811.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAATATCGGTCCGCTGTT..........2111.00100100
droVir3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCAGGCAAAATTCAGTTCGTCTACGTTTACAACAGCAGTGTCCCACACGCGGCTGACATCTATC----------AGCCTCATTCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGCAAAATTCAGTTCGTC................................................................2211.001000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTTTACAACAGCAGTGTCCCACA......................................2611.001000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCAGTTCGTCTACGTT..........................................................2011.001000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGTGTCCCACAC.....................................2011.001000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTTCGTCTACGTTTACA......................................................2111.001000000000000000010000000000000000000000000000000000000000000000
droMoj3
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTAAATCAGGCAAAATTCAGTTCGTTTACGTTTACAACAGCAGCGCTCCACACGCGGCCGACATTTATCAG-------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGTTTACAACAGCAGCGC............................................2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCAAAATTCAGTTCGTTTACGT...........................................................2511.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAACAGCAGCGCTCCACACGCGGCC...............................2811.001100000
droGri2
TAGGCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATAATTATAGCGCGATAG----------------------------------------------------------------------------------------------------------------------AGCTACCGATA-CCAATAC-CGATACC---C---ATACCGATAGCGATA---CC----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:00 PM