ID:

dya_161

 Coordinate:

3L:17082655-17082719 +

 Confidence:

Known Ortholog

 Class:

Mirtron

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.8 -18.8 -18.5

Flybase annnotation

utr3 [utr3_minus_5978]; intron [Dyak\GE22177-in]; CDS [Dyak\GE22177-cds]; CDS [Dyak\GE22177-cds]

No Repeatable elements found

Sense Strand Reads

TGAGAGCCAGTACAGAGCTGGCTTACATCAACCACAAGAACTTTCTACAGGTCAGGATCACACATACATTCCCTGTAGAATTTAATTTAATCAGGAATTTATGTGTGAACTTTAGATCATGTTCCAGGCCTGGCAGGATACCCAACAATGGTTCAGCGATCTCTT

**************************************************...(((.(((((((((.(((((.((...((......))...))))))).))))))))).)))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M026

head

 M043

female body

 M056

embryo

 V058

head

 V052

head

 V046

embryo

 V120

male body		 SRR1275486

Male prepupae		 SRR1275488

Male larvae		 SRR1275484

Male prepupae
..................................................GTCAGGATCACACATACATTCCCT........................................................................................... 24 0 1 1688.00 1688 1366 203 53 31 16 13 2 1 2 1
..................................................GTCAGGATCACACATACATTCCCTG.......................................................................................... 25 0 1 1618.00 1618 1182 366 52 2 3 12 0 1 0 0
..................................................GTCAGGATCACACATACATTCCC............................................................................................ 23 0 1 1187.00 1187 1049 74 33 13 14 3 1 0 0 0
..................................................GTCAGGATCACACATACATTCC............................................................................................. 22 0 1 429.00 429 354 42 17 6 4 4 2 0 0 0
..................................................GTCAGGATCACACATACATTC.............................................................................................. 21 0 1 352.00 352 334 16 1 0 0 1 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCC........................................................................................... 24 1 1 225.00 225 199 0 26 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTTTAG.................................................. 22 0 1 158.00 158 1 79 75 1 2 0 0 0 0 0
...................................................TCAGGATCACACATACATTCCCTG.......................................................................................... 24 0 1 78.00 78 15 63 0 0 0 0 0 0 0 0
....................................................CAGGATCACACATACATTCCCTG.......................................................................................... 23 0 1 47.00 47 8 39 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCG........................................................................................... 24 1 1 45.00 45 45 0 0 0 0 0 0 0 0 0
.............................................................................................GTAATTTATGTGTGAACTTTAG.................................................. 22 1 1 29.00 29 0 0 29 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTT..................................................... 19 0 1 28.00 28 26 0 2 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTTTAGT................................................. 23 1 1 28.00 28 0 2 26 0 0 0 0 0 0 0
.....................................................AGGATCACACATACATTCCCTG.......................................................................................... 22 0 1 27.00 27 1 26 0 0 0 0 0 0 0 0
...................................................TCAGGATCACACATACATTCCCT........................................................................................... 23 0 1 22.00 22 0 22 0 0 0 0 0 0 0 0
..................................................GTCAGGATGACACATACATTCCCTG.......................................................................................... 25 1 1 20.00 20 0 20 0 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTTTA................................................... 21 0 1 20.00 20 1 6 13 0 0 0 0 0 0 0
..................................................GGCAGGATCACACATACATTCCCTG.......................................................................................... 25 1 1 15.00 15 0 0 14 1 0 0 0 0 0 0
..................................................GGCAGGATCACACATACATTCCCT........................................................................................... 24 1 1 15.00 15 0 0 15 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCTGT......................................................................................... 26 0 1 14.00 14 2 9 1 0 0 1 1 0 0 0
..................................................GTCATGATCACACATACATTCCCTG.......................................................................................... 25 1 1 13.00 13 13 0 0 0 0 0 0 0 0 0
...................................................TCAGGATCACACATACATTCCC............................................................................................ 22 0 1 12.00 12 0 12 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCGG.......................................................................................... 25 1 1 11.00 11 11 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATT............................................................................................... 20 0 1 11.00 11 4 4 1 0 1 0 1 0 0 0
..................................................GGCAGGATCACACATACATTCCC............................................................................................ 23 1 1 11.00 11 0 0 11 0 0 0 0 0 0 0
..................................................GTCAGGATAACACATACATTCCCT........................................................................................... 24 1 1 9.00 9 1 7 0 1 0 0 0 0 0 0
...................................................TCAGGATCACACATACATTCC............................................................................................. 21 0 1 9.00 9 0 9 0 0 0 0 0 0 0 0
.............................................................................................GTAATTTATGTGTGAACTTTAGT................................................. 23 2 1 9.00 9 0 0 9 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTTTAGC................................................. 23 1 1 9.00 9 0 0 9 0 0 0 0 0 0 0
..............................................................................................GAATTTATGTGTGAACTTTAGT................................................. 22 1 1 8.00 8 0 1 3 0 0 1 3 0 0 0
..................................................GTCACGATCACACATACATTCCCTG.......................................................................................... 25 1 1 8.00 8 8 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATGACACATACATTCCCT........................................................................................... 24 1 1 7.00 7 0 7 0 0 0 0 0 0 0 0
..................................................GTCAGGATAACACATACATTCCCTG.......................................................................................... 25 1 1 7.00 7 1 6 0 0 0 0 0 0 0 0
..............................................................................................GAATTTATGTGTGAACTTTAG.................................................. 21 0 1 7.00 7 0 7 0 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTTTAGA................................................. 23 0 1 7.00 7 0 0 7 0 0 0 0 0 0 0
....................................................CAGGATCACACATACATTCC............................................................................................. 20 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCTT.......................................................................................... 25 1 1 6.00 6 0 3 2 0 1 0 0 0 0 0
..................................................GGCAGGATCACACATACATTCC............................................................................................. 22 1 1 5.00 5 1 0 3 1 0 0 0 0 0 0
..................................................GTAAGGATCACACATACATTCCC............................................................................................ 23 1 1 5.00 5 0 0 5 0 0 0 0 0 0 0
......................................................GGATCACACATACATTCCCTG.......................................................................................... 21 0 1 5.00 5 0 5 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACGTACATTCCCTG.......................................................................................... 25 1 1 5.00 5 4 1 0 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTTT.................................................... 20 0 1 5.00 5 0 1 4 0 0 0 0 0 0 0
..................................................GTCAGGATCACCCATACATTCCCT........................................................................................... 24 1 1 5.00 5 4 0 0 1 0 0 0 0 0 0
....................................................CAGGATCACACATACATTCCCT........................................................................................... 22 0 1 4.00 4 0 4 0 0 0 0 0 0 0 0
..................................................GTCAGGCTCACACATACATTCCCT........................................................................................... 24 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCGCTG.......................................................................................... 25 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0
..................................................GGCAGGATCACACATACATTCCCC........................................................................................... 24 2 1 4.00 4 0 0 4 0 0 0 0 0 0 0
.............................................................................................GGAATTTAGGTGTGAACTTTAG.................................................. 22 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0
.............................................................................................GTAATTTATGTGTGAACTTTA................................................... 21 1 1 4.00 4 0 0 4 0 0 0 0 0 0 0
..................................................GTCAGGATTACACATACATTCCCTG.......................................................................................... 25 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTTTAA.................................................. 22 1 1 4.00 4 0 1 3 0 0 0 0 0 0 0
..................................................GTCAGGATGACACATACATTC.............................................................................................. 21 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0
..................................................GTCAGGATGACACATACATTCC............................................................................................. 22 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0
..................................................GTCAGGACCACACATACATTCCCT........................................................................................... 24 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.................................................AGTCAGGATCACACATACATTCCCTG.......................................................................................... 26 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCAC............................................................................................ 23 1 1 3.00 3 1 1 1 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCACTG.......................................................................................... 25 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACT...................................................... 18 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0
.............................................................................................GTAATTTATGTGTGAACTTTAGC................................................. 23 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0
..................................................GTCTGGATCACACATACATTCCCT........................................................................................... 24 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCTGC......................................................................................... 26 1 1 3.00 3 2 0 1 0 0 0 0 0 0 0
..................................................GTAAGGATCACACATACATTCCCT........................................................................................... 24 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0
..................................................GTCTGGATCACACATACATTCCCTG.......................................................................................... 25 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGCGAACTTTAG.................................................. 22 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0
..................................................GTCAGGATCGCACATACATTCCCT........................................................................................... 24 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................GGCATTTATGTGTGAACTTTAG.................................................. 22 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATCCATTCC............................................................................................. 22 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0
..................................................GTCTGGATCACACATACATTCCC............................................................................................ 23 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0
..................................................GTCAGGATCACGCATACATTCCCT........................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................GATCACACATACATTCCCTG.......................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...................................................TCAGGATCGCACATACATTCCCTG.......................................................................................... 24 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
..................................................GTCAAGATCACACATACATTCCCT........................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................GTAAGGATCACACATACATTCC............................................................................................. 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0
..................................................GTCGGGATCACACATACATTCCCTG.......................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACGCATACATTCCCTG.......................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCTGTA........................................................................................ 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACACACATTCC............................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................TTCAGGATCACACATACATTCCCT........................................................................................... 24 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATGACACATACATTCCC............................................................................................ 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..................................................GGCTGGATCACACATACATTCC............................................................................................. 22 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0
...................................................TCAGGATCCCACATACATTCCCTG.......................................................................................... 24 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.............................................................................................TGAATTTATGTGTGAACTTTAG.................................................. 22 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTTTAC.................................................. 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0
..................................................GACAGGATCACACATACATTCCCT........................................................................................... 24 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCA............................................................................................ 23 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCTGTAGA...................................................................................... 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................GGATTTTATGTGTGAACTTTAG.................................................. 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0
..................................................GTCAGGATTACACATACATTCCCT........................................................................................... 24 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
....................................................CAGGATCACACATACATTCCC............................................................................................ 21 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
....................................................CAGGATCAGACATACATTCCCTG.......................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCCG.......................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................GGCTGGATCACACATACATTCCCT........................................................................................... 24 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.............................................................................................GTAATTTATGTGTGAACTTTAGA................................................. 23 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0
..................................................GTCAGGATCACCCATACATTCCCTG.......................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
........................................................ATCACACATACATTCCCTG.......................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTTTAT.................................................. 22 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0
..................................................GTCAGGATCACCCATACATTCC............................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTACCT........................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................AATTTATGTGTGAACTTTAGATCA.............................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCTGTAG....................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................TCAGGATCACACATACATTCCAT........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCCCT......................................................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATTCATTCCCT........................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTTAGGATCACACATACATTCCCT........................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GCCAGGATCACACATACATTCC............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGATCTTTAG.................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................GGATTTATGTGTGAACTTTAG.................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................TCAGGATCACACATACATTCCCTGT......................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCATGATCACACATACATTCCC............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATTCATTCCCC........................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................GTAATTTATGTGTGAACTTT.................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................ACGTCAGGATCACACATACATTCCC............................................................................................ 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................CTCAGGATCACACATACATTCCCTG.......................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTACCTG.......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATAACACATACATTCTCTG.......................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GGCTGGATCACACATACATTCCC............................................................................................ 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCCCACATACATTCCCTG.......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTC..................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCGCT........................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GGTAGGATCACACATACATTCCCC........................................................................................... 24 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCAAACATACATTCCCT........................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................AGGATCACACATACATTCCCC........................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCACCCATACATTCCCC........................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCTCACATACATTCCCTG.......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................TTTAATTTAATCAGGAATTTATGTGT........................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..................................................GTCAGCATCACACATACATTCCCTG.......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GCCAGGATCACACATACATTCCC............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................GTCATTTATGTGTGAACTTTAG.................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAAGATCACACATACATTCCCTG.......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATAGATTC.............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................CTCAGGATCACACATACATCCCC............................................................................................ 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................CTCAGGATCACACATACATTCCCT........................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATCCCCT........................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................AGGAATTTATGTGTGAACT...................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................ATCACACATACATTCCCTGT......................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCGTG.......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCCCCCCTACATTCC............................................................................................. 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................GTCAGGATCCCACATACATTCCCC........................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GGCAGGATCACACATACATTC.............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................ATCAGGAATTTATGTGTGAACTTTAG.................................................. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..................................................GTCAGGTTCACACATACATTCCC............................................................................................ 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....................................................AGGATCACACATACCTTCCCTG.......................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..................................................GTCAGTATCACACATACATTCCCTG.......................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCACACACACATTCCC............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................CGTCAGGATCACACATACATTCCCT........................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATGCCA............................................................................................ 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................GTCAGGATCGCACATACATTC.............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCA........................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTTTG................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................CGTCAGGATCACACATACATTCCCTG.......................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATCATACATACATTCCCT........................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCATACATACATTCCCC........................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATCCCCG........................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................GAATTTATGTGTGAACTTTAGA................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACCTACATTCCC............................................................................................ 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..................................................GGCAGGAGCACACATCCATTCC............................................................................................. 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................TCAGGATAACACATACATTCCCGG.......................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCAAACATACATTCCCC........................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTTAGGATCACACATACATTCCC............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................AGGATCACACATACATTCCCT........................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTTTAGG................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATGACACATACATTCTCTGT......................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGCTCACACATACATTCCC............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACCCATACATTCCC............................................................................................ 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................GTCCGGATCACGCATACATTCCC............................................................................................ 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTGCCTG.......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................AGGATCACACATACATTCCC............................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................GGATTTTATGTGTGAACTTTAGC................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GCCAGGATCACACATACATTCCCC........................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATAACACATACATTACA............................................................................................ 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCAT........................................................................................... 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..................................................GTCAGGTTCAGACATACATTCCCT........................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................ATCACACATACATTCCCTGTAGA...................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATAAATTCCC............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACCTTCCC............................................................................................ 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................GGATCACACATACATTCCCT........................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGCATCACACATACATTCCCT........................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTTAGGATCACACATACATTCCCTG.......................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGCATCACACATACATTCCCGG.......................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATGACACATACATTCGCT........................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................TCCCTGTAGAATTTAATTTAATC......................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCTTG.......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GGCAGGATCACACATTCATTCCCTG.......................................................................................... 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................TCAGGATCGCACATACATTCCC............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................GGAATTTACGTGTGAACTTTAG.................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGTATCACACATACATTCT............................................................................................. 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................GTCAGTATCACACATACATTCC............................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCGCACATACATTCCCTG.......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACAGTCC............................................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATACCC............................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTATAG.................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GGAAGGATCACACATACATTC.............................................................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCATGATCACACATACATTCCCTGT......................................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..................................................GGCAGGATCACATATACATTCCCT........................................................................................... 24 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....................................................GTCGATCACACATACATTCCCTG.......................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTGAGGATCACACATACATTCCC............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCAC........................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCCGGATCACACATACATTCCC............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTATAGT................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................AGCATCACACATACATTCCCTG.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTTAACTTTAG.................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GGCAGGATCACACATACATTCCCTGT......................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACGTTCCCTG.......................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATACCCT........................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................AATTTATGTGTGAACTTTAGAT................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GCCAGGATCACACATACATTCCCT........................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
................................................GCGTCAGGATCACACATACATTC.............................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCACT........................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTAAGGATCACACATACATTCCCTG.......................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACACTCCC............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATAAATTCCCC........................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................GGAATTTATGTGTGAACTTC.................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................................TCACACATACATTCCCTG.......................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................ATCAGGATCACACATACATTCC............................................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................GTCAGGATCACACAGACATTCC............................................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................GTCAGGATCACACCTACATTCCCT........................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................GTCATGATCACACATACATTCCCT........................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................CTACAGATCATGTTCCAGGCCT.................................. 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................GTAATTTATGTGTGAACTTTAC.................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCACTCATACATTCCCTG.......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................CTGGTCAGGATCACACATACATTCCC............................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................TCAGGATCCCACATACATTCCCGG.......................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................GTAATTTCTGTGTGAACTTTAG.................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCAAACATACATTCCCTG.......................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCCCACATACATTCCC............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................AGTCAGGATCACACATACATTCCGTG.......................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................GGATCACACATACATTCCCTGT......................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACGCATACATTC.............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GGCTGGATCACACATACATTCCCC........................................................................................... 24 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTAAGGAACACACATACAATCCCTG.......................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GGAAGGATCACACATACATTCCCTG.......................................................................................... 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATGACACATACATTCTC............................................................................................ 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATAACACATACATTCCC............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAAGATCAAACATACATTCCCTG.......................................................................................... 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................ATCAGGATCACACATACATTCCCTG.......................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATGCATTCCCT........................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................TTTAATCAGGAATTTATGTGTGAACT...................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..................................................GTCAGGATCACACATACATTACC............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................ATCAGGATCACACATACATTCCCT........................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCTA.......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACACAACCATTCCCT........................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................GTCAGGATCACACCTACATTC.............................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................TCAGGATCGCACATACATTCCCT........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................AGGATCACCCATACATTCCCTG.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCGGGATCACACATACATTCC............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................ATCAGGATCACACATACATTCCCTGT......................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATGACACATACATTCCCTC.......................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATAACACATACATTC.............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTCAGGCTCACACACCCATTCCCT........................................................................................... 24 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................GTCAGGATCACACATACATTCCCAG.......................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................ACGTGTCAGGATCACACATACATTCCCTG.......................................................................................... 29 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................CGAATTTATGTGTGAACTTTAG.................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................GTCAGGATCACAGATACATTCCC............................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................GGATTTTATGTGTGAACTTT.................................................... 20 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................ATAATTTATGTGTGAACTTTAGT................................................. 23 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................TCAGGAATTTATGGGTGAACC...................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................GGATTTTATGTGTGAACTTTAGT................................................. 23 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................GAATTTATATGTGAACTTTAG.................................................. 21 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................GGCTTTTATGTGTGAACTTTAGT................................................. 23 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................TGCGAACTTTAGAGCGTGTTC......................................... 21 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................GAATTTATTTGTGAACTTTAGT................................................. 22 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................GTATTTTATGTGTGAACTTTAGT................................................. 23 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................AATTTATGTGTGAACTTTAGTTT............................................... 23 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................GTCATTTATGTGTGAACTTTAGT................................................. 23 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

ACTCTCGGTCATGTCTCGACCGAATGTAGTTGGTGTTCTTGAAAGATGTCCAGTCCTAGTGTGTATGTAAGGGACATCTTAAATTAAATTAGTCCTTAAATACACACTTGAAATCTAGTACAAGGTCCGGACCGTCCTATGGGTTGTTACCAAGTCGCTAGAGAA

**************************************************...(((.(((((((((.(((((.((...((......))...))))))).))))))))).)))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528802

follicle cells
.................................................................................................................................GACCGTCCTATGGGTCCAT................. 19 3 20 0.50 10 10