ID:

dya_1453

Coordinate:

X:16615699-16615972 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-42.0 -41.7 -41.7

Flybase annnotation

exon [dyak_GLEANR_19014:3]; CDS [Dyak\GE17708-cds]; CDS [Dyak\GE17708-cds]; exon [dyak_GLEANR_19014:4]; intron [Dyak\GE17708-in]

Repeatable elements

NameClassFamilyStrand
(CCCGAA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTGGCCGACTGCGTGAAGCTGATGATCGAGTACCAGGGGCGCATATTCGAGTAAGTGAGCCCCGCTGAGGAGGAGCAGCCCCAGTCTCCCAGGTGAAGGTCCATTTGGTGTCCGGGTGCCCGCTACTGTTACCCACAAAACCCGAATCCCAGCCGCTTATGCCTCATCCAAACCGCTCACCTACTGTGCCGTTGTTTCGATCGCTTTGCTAACCACTCGAAATCCTGAACCTGAACCTGAACCTGAACCCGTACCCACTGTACCTGCAACACCTGTCCCCATTCCCAACGTTTCCGATCCCAATCCCGATCACGTCGCCAACAGATGCACCGCCGATCGCCGCCGCCTGAGCATGCGCAACCTGAAGAAGACTC
**************************************************....(((..((((.....)).)).((((...((((....(((((..((((.((.((((.((.(((((......................))))).)).))))..((....))........(((.((.((.....)).)).)))(((((((................)))))))........)).))))..)))))...........))))...))))..)))..****************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total M043
female body
V120
male body
M056
embryo
M026
head
GSM1528802
follicle cells
V058
head
............................................................................................................................................................................................................................................................................ACACCTGTTCCCATGCCGAAC..................................................................................... 21 3 3 32.67 98 98 0 0 0 0 0
.............................................................................................................................................................................................................................................................................CACCTGTTCCCATGCCGAAC..................................................................................... 20 3 7 7.86 55 55 0 0 0 0 0
..............GAAGCTGATGATCGAGTACCAGGGGC.............................................................................................................................................................................................................................................................................................................................................. 26 0 1 2.00 2 0 1 1 0 0 0
..............................................................................................................................................................................................................................................................................ACCTGTTCCCATGCCGAAC..................................................................................... 19 3 20 2.00 40 40 0 0 0 0 0
..................................................GTAAGTGAGCCCCGCTGAGGAGGAGCA......................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................................................................................................................ACCCACTGTACCTGCAACACCT.................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0
......................................................................................................................................................................................................................................CTGAACCTGAACCTGAACCCG........................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................CTGAGCATGCACAACCTGAAGA...... 22 1 1 1.00 1 0 1 0 0 0 0
......................................................GTGAGCCCCGCTGAGGAGGAGC.......................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................GAAGGTCCATTTGGTGTCC..................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................GCCGCCTGAGCATGCGCAAC............. 20 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................CACCTACTGTGCCGTTGTTTC................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................ATGCGCAACCTGAAGAAGA... 19 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................GAAGGTCCATTTGGTGTCCGGGTGCCC............................................................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0
.................................................AGTAAGTGAGCCCCGCTGAGG................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
.............................GTACCAGGGGCGCATATTCGG.................................................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.............................GTACCAGGGGCGCATATTCGAAT.................................................................................................................................................................................................................................................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0
.................GCTGATGATCGAGTACCAGGG................................................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
......................TGATCGAGGACCAGGGGCGCATAT........................................................................................................................................................................................................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................CGATCGCTTTGCTAACCACTCGAA......................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................TTCCGATCCCAATCCCGATCACGTCGCC....................................................... 28 0 1 1.00 1 0 0 1 0 0 0
.........................................................................................................................................................................................................................................................CTTACCCACTGTACCTGCAACACCT.................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0
......................TGATCGAGTACCAGGGGCGCATATT....................................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
..................CTGATGATCGAGTACCAGGGGC.............................................................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0
......................................................................AGGAGCAGCCCCAGTCTCCCAGGT........................................................................................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................ATCCCAGCCGCTTATGCCTCATCCA............................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
....................GATGATCGAGTACCAGGGGCGCAT.......................................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................CAGATGCACCGCCGATCGCC................................. 20 0 1 1.00 1 1 0 0 0 0 0
...................TGATGATCGAGTACCAGGGGCGCA........................................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................................GTCCGGGTGCCCGCTACTGTTACCCACA............................................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................ACACCTGTCCCCATGCCGAAC..................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................CGCCGCCGCCTGAGCATGCGC................ 21 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................ACACCTGTCCCCATGCCGAA...................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................CCGTTGTTTCGATCGCTTT....................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................TTCGATCGCTTTGCTAACCACTCGA.......................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
............GTGAAGCTGATGATCGAGTACCAGGGGC.............................................................................................................................................................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0
............................................................................................GTGAAGGTCCATTTGGTGTCC..................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................ACACCTGTTCCCATTCCGAA...................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................AAACCGCTCACCTACTGTGC......................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................TGAACCTGAACCTGAGCCTGAACCC............................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................CGCCGCCGCCTGAGCATGCGCAACCT........... 26 0 1 1.00 1 1 0 0 0 0 0
....................GATGATCGAGTACCAGGGGC.............................................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0
..............GAAGCTGATGATCGAGTACCAGGG................................................................................................................................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................CATCCAAACCGCTCACCTACTGTGCCGT...................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................ACACCTGTTCCCATGCCTAAC..................................................................................... 21 3 3 0.67 2 2 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................GATCCCAATCCTGAT................................................................ 15 1 20 0.55 11 0 0 0 0 11 0
...........................................................................................................................................................................................................................................................................AACACCTGTTCCCATGCCGAAC..................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0
.........................................................AGCCCCGATGAGTAGGAG........................................................................................................................................................................................................................................................................................................... 18 2 6 0.50 3 3 0 0 0 0 0
.........................................................................................................................................................................................................................................................................GATACACCTGTCCCCATGCC......................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0
............................................................................................................................................................................................................TTTGCGAACGACACGAAATCC..................................................................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 1
............................................................................................................................................................................................................................................................................ACACCTGTACCCATGCCGAA...................................................................................... 20 3 7 0.14 1 1 0 0 0 0 0

Anti-sense strand reads

GACCGGCTGACGCACTTCGACTACTAGCTCATGGTCCCCGCGTATAAGCTCATTCACTCGGGGCGACTCCTCCTCGTCGGGGTCAGAGGGTCCACTTCCAGGTAAACCACAGGCCCACGGGCGATGACAATGGGTGTTTTGGGCTTAGGGTCGGCGAATACGGAGTAGGTTTGGCGAGTGGATGACACGGCAACAAAGCTAGCGAAACGATTGGTGAGCTTTAGGACTTGGACTTGGACTTGGACTTGGGCATGGGTGACATGGACGTTGTGGACAGGGGTAAGGGTTGCAAAGGCTAGGGTTAGGGCTAGTGCAGCGGTTGTCTACGTGGCGGCTAGCGGCGGCGGACTCGTACGCGTTGGACTTCTTCTGAG
****************************************************************************************************....(((..((((.....)).)).((((...((((....(((((..((((.((.((((.((.(((((......................))))).)).))))..((....))........(((.((.((.....)).)).)))(((((((................)))))))........)).))))..)))))...........))))...))))..)))..**************************************************
Read size # Mismatch Hit Count Total Norm Total M043
female body
V058
head
V120
male body
..................................................................................................................................................................GAGTAGGTTTGGCGAGTGGAT............................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
............................................................................TCTGGGTCAGAGGGTCCACTGT.................................................................................................................................................................................................................................................................................... 22 3 1 1.00 1 0 1 0
..........................................................................................................................................................................TTGGCTTGTGGCTGACACGGC....................................................................................................................................................................................... 21 3 5 0.20 1 0 1 0
........................................................................................................................................................................................................................................................................................TAAGAGTTGCATAGGGTAGGG......................................................................... 21 3 11 0.18 2 2 0 0
..........................................................................................................................................................................................................................................................................GTTGTGGACATGGGTACAGG........................................................................................ 20 3 6 0.17 1 1 0 0
..................................................................................................................................TGGGTGCGTTGGGCTGAGGGT............................................................................................................................................................................................................................... 21 3 7 0.14 1 0 1 0
.............................................................................CGGGGCCAGAGGGCGCACTTC.................................................................................................................................................................................................................................................................................... 21 3 16 0.13 2 1 0 1
.................................................................................................................................................................GGAGTAGGTTTGACGAGGGT................................................................................................................................................................................................. 20 3 13 0.08 1 0 1 0
........................................................................................................................................................................................................................................................................................TAAGAGTTGCATAGGGTAGG.......................................................................... 20 3 13 0.08 1 1 0 0
....................................................................................................................................................................GTGGGTCTGGCGCGTGGAT............................................................................................................................................................................................... 19 3 18 0.06 1 0 1 0
..............................................................................................................................................................................................................................................................................................................................................GTAGGGGAGGCGGACTCGT..................... 19 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 X:16615649-16616022 + dya_1453 CTGGCCGACTGCGTGAAGCTGATGATCGAGTACCAGGGGCGCATATTCGAGTAAGTGA--GCCCCGCTGA-----------------------------------------GGAGG------A--GC--------------------------------------------------AGCC-CCAGTCTCC-----CAGGTGAAGGTCCAT---TTGGTGTCC-GGGTGCCC---GCTACT-----------------------------------------------------------------------------------------------------------------------GTTACCCA---CAA-------AACCCGAATCCCAGC-------------------CGCTTAT----------GCCTCATCCAA----ACC---GCTCACCTACTGTGCCGTT------GTTTCG--------------ATCG-C-TTTGCTAACCACTCGAA-------ATCC----------TGAAC------------C------TGAACCTGAACCTGAACCC------GTA---------C---------------CCACTGTACCTGCAACACC--T--------------------------------------------------------------------------------------GTCCC---CA--TTCCCAACGTTTCCGAT-CCCAATCCCGATC-ACG--------TCGCCAACAGATGCACCGCCGATCGCCGC------CGCCTGAGCATGCGCAACCTGAAGAAGACTC
droEre2 scaffold_4690:8319298-8319655 + CTGGCCGACTGCGTCAAGGTGATGATCGAGTACCAGGGGCGCATATTCGAGTAAGTGA--GCCCCGCTGA-----------------------------------------GG---------A--GC--------------------------------------------------AGCC-CCAGTCTCC-----CAGGTGAAGGTCCAT---TTGGTGTCC-GGGCGCCC---GCTACT-----------------------------------------------------------------------------------------------------------------------GTTACCTA---CA--------AACCCGAATCCCAGC-------------------CGCTTAT----------GCCTCATCCAA----ACC---GCTCACCTACTGTGCCGTT------GTTTCG--------------AACG-C-TTTGCTAACCACTCGAA-------ATCC----------------------------------TGAACCTGA------ACCC------GAA---------C---------------CCACTGTACCTGCCACACC--A--------------------------------------------------------------------------------------ATCCC---CA--TTCCCAACGATTCCGAT-CCCAATCCCGACC-ACG--------TCGTCTACAGATGCACCGCCGATCGCCGC------CGCCTGAGCATGCGCAACCTGAAGAAGACTC
droSec2 scaffold_8:297094-297465 + CTGGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGGCGCATATTCGAGTAAGTGCCAGCCCCGCTGA-----------------------------------------GGAGG------A--GC--------------------------------------------------AGCCCCCAGTCTCC-----CAGGTGATGGTCCAT---TTGGTGTCC-GGGCGCCCGCCGCTACT-----------------------------------------------------------------------------------------------------------------------GTTACCCA---CAA-------AACCCGAATTCCCGC-------------------CGCTTAC----------GTCTCATCCAAACAAACC---GCTCACCTACTGTGCTGTT------GTGTCG--------------AACG-C-TTTGCTAACCACTCGAAAACCGAAATCC----------------------------------TCAACCTGA------ACC-------------------C---------------CCACTGTACCTGCCACACC--TATACCCA----------------------------------------------------------------CTCCCGA------------------------------ATCCATT-TCCAATCCCGATC-ACG--------TCGTCTACAGATGCACCGCCGATCGCCGC------CGCCTGAGCATGCGCAACCTGAAGAAGACTC
droSim2 x:17090704-17091094 + CTGGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGGCGCATATTCGAGTAAGTGCGAGCCCCGCTGA-----------------------------------------GGAGG------A--GC--------------------------------------------------AGCCCCCAGTCTCC-----CAGGTGATGGTCCAT---TTGGTGTCC-GGGCGCCCGCCGCTACT-----------------------------------------------------------------------------------------------------------------------GTTACCCA---CAA-------ACCCCGAATTCCCGC-------------------CGCTTAC----------GTCTCATCCAA----ACC---GCTCACCTACTGTGCCGTT------GTGTCG--------------AACG-C-TTTGCTAACCACTCGAAAACCGAAATCC----------------------------------TCAACCTGA------ACCCGTTATCGAA-C------CC---------------CCACTGTACCTGCCACACC--TATACCCACTC---------------------------------------------------CCGAT--TCGCTCCCGA------------------------------ATCCGTT-TCCAATTCCGATC-ACG--------TCGTCTACAGATGCACCGCCGATCGCCGC------CGCCTGAGCATGCGCAACCTGAAGAAGACTC
dm3 chrX:17990857-17991243 + CTGGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGGCGCATATTCGAGTAAGTGCGAGCCCCGCTGA-----------------------------------------GGAGG------A--AC--------------------------------------------------AGCC-CCAGTCTCC-----CAGGTGATGGTCCAT---TTGGTGTCC-GGGCGCCCGCCGCTACT-----------------------------------------------------------------------------------------------------------------------GTTACCCA---CAA-------AACCCGAATCCCAGC-------------------CGCTTAC----------GTCTCATCCAA----ACC---GCTCACCTACTGTGCCGTT------GTGTCG--------------AACG-C-TTTGCTAACCACTCGAAATCCGAAATCC----------------------------------TCAACCCGA------AACC------GAA-C--A---CC---------------CCACTGTACCTGCCACACCTCTATACCCATTC---------------------------------------------------CCGAT--TCGCTCCCGA------------------------------ATCTGTT-TCCAATCCCGATC-ACA--------TCGTCTACAGATGCACCGCCGATCGCCGC------CGCCTGAGCATGCGCAACCTAAAGAAGACTC
droEug1 scf7180000408176:693726-694080 - CTGGCTGACTGCGTCAAACTGATGATCGAGTACCAGGGGCGTATATTCGAGTAAGTGA--GCCCCATAAA-----------------------------------------GGAGG------A--GG--------------------------------------------------ACCCCCACGTCTCC-----CTGGTGAAGGTGCA----TTGGTTTCC-GGCCGACC---GCTACT-----------------------------------------------------------------------------------------------------------------------GTATTCCCCAACAA-----AAACCCCAAATCCCAGC-------------------TGCTTAA----------ATCTCATCAAA----ACT---GATCACCC-TTGTGCCGTT------GTCTCG--------------AACG-C-TTTGCTAACCACACGAA-------ATCC----------------------------------TGAACCTGAACCTGAATCC------GAA---------C---------------CCACTGTACCTGCACCTCC--A--------------------------------------------------------------------------------------ATCCT--CCA--TTCCCAAC-------------------GATC-CCC--------TCGTCTACAGATGCACCGCAGATCGCCGC------CGCCTGAGCATGCGCAACCTGAAGAAGACTC
droBia1 scf7180000301760:616685-617026 - CTGGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGTCGCATATTCGAGTAAGTGA--GTCCCGTTGC-----------------------------------------GGAGG------A--GC--------------------------------------------------AGCCCCCGGTCTCC-----CTGGTGAAGGTGCA----TTGGTGTCC-GGCCGCCC---GCTACT-----------------------------------------------------------------------------------------------------------------------GTTCCCCC---C----------ACCCGAGTCCCAGC-------------------CGCTTGC----------GCCTCATCCAA----ACCCGTGCTCATCC-CTGTGCCGTT------GTCTCG--------------AAAG-C-TTTGCTAACCACACGAA-------CTCC----------------------------------TGAACCCGT------ACCC------GCA---------C---------------CCACTGTACCTGCAACACC--A--------------------------------------------------------------------------------------ATCCC---CC--ACCCCCAC-------------------G-TC-CCG--------TCGTCTACAGATGCACCGCCGACCGCCGC------CGCCTGAGCATGCGCAACCTGAAGAAGACCC
droTak1 scf7180000415843:493943-494278 - CTGGCCGACTGCGTTAAGCTGATGATCGAGTACCAGGGTCGCATATTCGAGTAAGTCA--GC-----TGG----T------------------------------------GGAGG------AGAG---------------------------------------------------GGCT-CCCGTCTCC-----CTGGTGAAGGTGC----------------------C---GCTACTTTCCGCC----------------------------------------------------------------------------------------------------------------GTTTCCCC-G-AAAAACCCAAACAAAGAATCCAAGC-------------------TGCTTGC----------GCCTCATCCAA----AAC---GTT-------TGTGCCGTTAT----GCCTCG--------------AAAG-C-TTTGCTAACCACACGTA-------ATCC----------TGAAC-TCCTGA---ATC------CCCA-CCGAACCTGAACCT------GAA---------C---------------CCACTGTACCTGCAACTCC--A--------------------------------------------------------------------------------------ATCCC-----------------------------------------C--------CCATCTACAGATGCACCGCCGATCGCCGC------CGTTTGAGCATGCGCAACCTGAAGAAGACTC
droEle1 scf7180000491193:196902-197296 + CTGGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGGCGGATATTCGAGTAAGTGGAG--GT----GG-AGGT------------------------------GGA---GGAGG---AGGA--GGAGCCCCAGCCCCAGCCC------------------CAGTTCGC--------GTT-CCCGTTTAC-----CTGGTGAAGGTGCA----TTGGTTTCCTGGCCGCCC---ACTACT-----------------------------------------------------------------------------------------------------------------------GTTTTCCC---CAATGTCCGAATCCCGAATCCCAGCTG-----------------CGCTTATACACCTCAATGCCTCATCCAA----ACC---GCTCATCC-CTGTGCCGTT------GTCTCG--------------AACG-C-TTTTCTAACCACTCGAA-------CTC---------------------GA---ATGCC----CGAACCTGA------ACAC------CAATCCCCAACAC---------------------------------C--A--------------------------------------------------------------------------------------ATTCC---GA--TCCCCAAC-------------------GATC-CCG--------TCGTCTACAGATGCACCGCCGATCGCCGCCAGCGTCGTCTGAGCATGCGCAACCTGAAGAAGACTC
droRho1 scf7180000779986:526451-526817 - TTAGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGGCGCATATTCGAGTAAGTGA--GCCCCATAAA-----------------------------------------GGAGGAGGAGGA--GGAGCCCCAGCCC--------------------------------------CAGC--CCCGTCTCC-----CTGGTGAAGGTGCA----TTGGTTTCC-GGCCGCCC---GCTACT-----------------------------------------------------------------------------------------------------------------------GTTTCCC------A-------AACCCGAATCCTAGC-------------------TGCTTATGTAC------GCCTCATCCAA----ACC---GCTCATCC-CTGTGCCGTT------GTCTCG--------------AACG-T-ATTGCTAACCACACGAA-------ATCC----------------------------------TGAACCTGA------ACCC------AA--C------AC---------------CCTCTGTACCTGCTACCCG--A--------------------------------------------------------------------------------------ATCCC---TA--TTCCCAAC-------------------GATC-CCG--------TCGTCTACAGATGCACCGCCGATCGCCGCCAGCGTCGTCTGAGCATGCGCAACCTGAAGAAGACTC
droFic1 scf7180000453872:371061-371405 - CTGGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGGCGGATATTCGAGTAAGTGA--GCCCCGTAGA-----------------------------------------GGAGCAGG---A--GG--------------------------------------------------AT-C-CCCGTCTCT-----TTGGTGAAGGTGCA----TTGGTTTCC-GGCCGCCC---GCTACT-----------------------------------------------------------------------------------------------------------------------GTTCCCC------A-------AACCCGAATCCCAGC-------------------TTCTTAA----------GTCTCATCCGA----ATC---GCTCTCCC-CTGTGCCGTT------GTCTTG--------------ATCG-C-TTTGCTAACCACAAGAA-------ATCC----------------------------------TGAACCCGA------ACCC------GAA---------C---------------CCACTGTACCTGCCACTCC------------------------------------------------------------------------------------------TTCC---CA--ATCCCAAC-------------------GATC-CCG--------TCGTCTACAGATGCACCGCCGATCGCCGCCTGCCTCGACTGAGCATGCGCAACCTGAAGAAGACTC
droKik1 scf7180000302696:1763640-1763979 - CTGGCGGACTGCGTCAAGCTGATGATCGAGTACCATGGTCGCATATTCGAGTGAGTGA--GCCAG---------------------------------------------------------------------------GCCC------------------CA--TTGA--------ATACCCGA---TC-----CTGGTGATGGTGCA----TTGGTTCCT-T----------------------------------------------------------------------------------------------------------------------------------------------------A-------GTCCCGAATCCCAGC-------------------CGCTTTT----------GCTCCATC----------------------TTGTGCTGTTGTT---GTCTTTCTCTGGAACGAACAAATG-C-TTTGCTAACCAC--GAC-------ATCC----------CCAAC------------T------TCAACCTGA------ACCT------GAA---------C----------------CTCTGTACCTGTACCCTT--T-------------------------------------------------------------G--CCCCATG--------------TATCCCCCCCACCTTCCCATC-------------------GATCCCCA--------TCGCCTGCAGATGCACCGCCGATCGCCGCCTGCGCCGTCTGAGCGTTCGCAACCTGAAGAAGACAC
droAna3 scaffold_13335:1632464-1632785 - dan_2262 CTGGCCGACTGCGTCAAGCTGATGATAGAGTACCACGGGAGGATTTTCGAGTAAGTGAAG--CAACCCGA-----------------------------------------GCCGA------G--GT----C----------------------------------------GTCCC--TCCCCTCCCGATGGTGATTGGTGATGGTGCT----TTGCTTCCC-ACTCCGCT---GCTCCC-----------------------------------------------------------------------------------------------------------------------GTTC-------------------------------------------------------------------------------------------TCGCCT-CTGTGTTATTGTGGTCGTCTTT----G---------AA-GTTTCTTGCTAAACCACC----------ATTC----------TGAATATTCC--------------GAAACTCGA------ACCC------GT------------------------------CCTGTTCCCAACCCC--C--------------------------------------------------------------------------------------ATCCT--CCA--CTCCC-AC----------GTC------GATC-C-----------AATCTACAGAAACACCGCCGATCGCCGCCACCGTCGCCTGAGTGTCCGGAACCTGAAGAAGACGC
droBip1 scf7180000395454:32211-32504 + CTGGCGGACTGCGTCAAGCTGATGATCGAGTACCATGGCCGTATTTTCGAGTAAGTGAAG--CAACC-CA-----------------------------------------GCAGCC--------CG------------------------------------A--T-GATGGT---------------GA-----TTGGTGATGGTGCT----TTGCTTCCC-CCGCCCTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------ATCC----------------------------------------------------------------CGCCT-CTGTGTTATTGTGGTCGTCTTA--------------AAGT-A-ACTGCCAACA-----TA------------------ATCTGAATATCCC--------------GAAACTCGA------TCCC------GCA---------C---------------CC----TACCCACA-----------------------------------------------------------------------------------------------------------TCCCATC-------------------GCTCCACGCTCCAAATACATCTACAGAAACACCGCCGATCGCCGACATCGTCGCTTGAGTGTCCGGAATCTGAAGAAGACGC
dp5 XL_group1e:5340895-5341321 + CTGGCCGATTGCGTCAAGCTGATGATCGAGTACCATTCGCGCATATTCGAGTAAGTGATGTCCCCACTGA-----------------------------------------GGGTG--------------------------------------------------------GTGCCAGCCCCCTTCCGAT-----TCGGTGATGGTGTGTATATTGGTTCCT-AGCCGCAG-T--CT---TCACGCCGCCTCCCACCCCGCACCGCACCGCAGTA-------CGCAGTACATCCCCGTCCGCCTACGCCTCTAGCTGCTTGTCTG----------------------------------------C------C-------CACCCATCCCCCAA---------------------------CCACTTG--------------------------------AATGTCTCGTT------GTGTCA--------------AGAG-T-TATGCTAACCTC-CGA--------ATCCTCCTACAATCC---------GA---ATC------CAAACCTGAACCTGAACCT------GAA---------C---------------CCACTGTACCTGCACCCTC--G----------------------------------------------------------------ATCCTTGATCCCTGATCCCCCAA-CC--------------------------TACAA----------------------TCCTACAGATGCACCGCCGACCGACGCCTGCATCGCCTGAGTATGCGAAACTTGAAGAAGACGC
droPer2 scaffold_21:252476-252903 + CTGGCCGATTGCGTCAAGCTGATGATCGAGTACCACTCGCGCATATTCGAGTAAGTGATGTCCCCACTGA-----------------------------------------GGGTG--------------------------------------------------------GTGCCAGCCCCCTTCCGAT-----TCGGTGATGGTGTGTATATTGGTTCCT-AGCCGCAG-T--CT---TCACGCCGCCTCCCACCCCGCACCGCACCGCAGTACGCAGTACGCAGTACATCCCCGTCCGCCTACGCCTCTAGCTGCTTGTCTG----------------------------------------C------C-------CAACCATCCCCCAA---------------------------CCACTTG--------------------------------AATGTCTCGTT------GTGTCG--------------AATG-T-TATGCTAATCTC-CGA--------ATCCTCCTACAATCC---------GA---ATC------CAAACCTGA------ACCT------GAA---------C---------------CCACTGTACCTGCACCCTC--G----------------------------------------------------------------ATCCTTGATCCCTGATCCCCCAA-CC--------------------------TACAA----------------------TCCTACAGATGCACCGCCGACCGACGCCTGCATCGCCTGAGTATGCGAAACTTGAAGAAGACGC
droWil2 scf2_1100000004515:3136348-3136756 + CTTGCCGATTGTGTTAGGATCATGATCGAGTACAAGAGTCGGATATTTGAGTAAGTTG--GATCG----A-----------------------------------------AAACA------AAACG--------------------------------------------------AT-A----ACCAAG-----ATGGTGATGGTTC---------------------CTGCCACTGCAATCCGCC-----CAACCCCCTACAGTCCAGCATCA---AATTCC---CACATCCCTT---CCCAAAGCTTCTACATGGTCGTCTACGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCTCGATTA--A------T-------TATTGATCCCTTAA---------------------------CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------TCTTTGTACCTGTCATATT--TACAATTTATATTGCTTTATTCATAACTATATATATGTATCTATATAAATGTATGTATATACCCGTC--CTATTACCTTATCCATGTA-C----------------------TCCTCCTCA----------------------TCTATATAGATGCACAGCCGATCGTCGT------CGCATCAGCGTTAAGAACCTAAAGAAGACAC
droVir3 scaffold_12928:7403964-7404334 + CTGGCCGATTGTGTGAGGCTCATGATCGAGTACCAGGGTCGCATATTCGAGTAAGTGGAG--CG-----AGCGCCCCCCACCCCCACCCCCCTTCAATCACGCAAAAAAAAAAAAA------A--GA--------------------------------------------------AGCT-TTTGTACCT-----GTGGTGCTGGTATCA---TTGGTGTTG-GCTCGTA----AAGATC----GTT----------------------------------------------------------------------------------------------------------------GTTT-------------------CCCGGCTCTAAGA-------------------TGCTTCC----------GATAT-------------------------GTATAAAGTT------GTCTCG--------------AACT-TGTTTGCTAATTATTCA----------CTT----------CGAACAATACCAAAAATTCCCCAATGAAATCAA------ATCC----------------------------------CAACCGTAT------CCAA------------T---------------------------------------------------CCGTA--CTGCT---------------------------CCCA------CATCA-TCT------------------------TCACACAGATGCACGGCCGATCGTCGACTGAAGCGTCTGAGTGTGCGCAACTTGAAGAAGACGC
droMoj3 scaffold_6473:2646744-2647146 - CTGGCCGATTGCGTGAACCTGATGATCGAGTACCATGCGCGCATATTCGAGTAAGTGGAG--CGCCTCCA-----------------------------------------GCGGC------A--GC----CAA------GCCTAATCCAAAGCTCACTCCCCAAAA----------AGCT-TTTGTACAT-----GTGGTGCTGGT------------GTTC-GTGTTGTT---GGTATT--------------------------------------------------------------------------------------------------------------GGTATCC------CTCG---CAG-------TTCCCAGATCCCCACGGAGCTCAAGGCTCTTCGATGCTTTC----------G----AT------------------------CCTAAAGTT------GCTTCGCACTCG--------AACG----TTGCTAATTAACTA--AACCGAAATCG----------------------------------CAAACCA-A------ACC--------AA---CCCAAACCAATTCCAATCCCAATCACTGCTCCTGTCCCTGT------------T---------------------------------------------------CCGCA--TCGCT---------------------------CCCA------CTGCT-TCTACTCT------------------ATACCACAGATGCACGGCCGATCGTGGATTAAAGCGTCTCAGCGTGCGCAATCTGAAGAAGACGC
droGri2 scaffold_15081:3304270-3304331 - TTGGCCGATTGCGTGAAGCTAATGATCGAGTATCAGGGTCGCATATTCGAGTAAGTGC--ACCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CTGGCCGACTGCGTGAAGCTGATGATCGAGTACCAGGGGCGCATATTCGAGTAAGTGA--GCCCCGCTGA-----------------------------------------GGAGG------A--GC--------------------------------------------------AGCC-CCAGTCTCC-----CAGGTGAAGGTCCAT---TTGGTGTCC-GGGTGCCC---GCTACT-----------------------------------------------------------------------------------------------------------------------GTTACCCA---CAA-------AACCCGAATCCCAGC-------------------CGCTTAT----------GCCTCATCCAA----ACC---GCTCACCTACTGTGCCGTT------GTTTCG--------------ATCG-C-TTTGCTAACCACTCGAA-------ATCC----------TGAAC------------C------TGAACCTGAACCTGAACCC------GTA---------C---------------CCACTGTACCTGCAACACC--T--------------------------------------------------------------------------------------GTCCC---CA--TTCCCAACGTTTCCGAT-CCCAATCCCGATC-ACG--------TCGCCAACAGATGCACCGCCGATCGCCGC------CGCCTGAGCATGCGCAACCTGAAGAAGACTCSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
..............GAAGCTGATGATCGAGTACCAGGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200100010000
..................................................GTAAGTGA--GCCCCGCTGA-----------------------------------------GGAGG------A--GC--------------------------------------------------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------C---------------CCACTGTACCTGCAACACC--T--------------------------------------------------------------------------------------.........................................................................................................................2211.00110000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------TGAACCTGAACCTGAACCC------G................................................................................................................................................................................................................................................................2111.00101000000000
......................................................GTGA--GCCCCGCTGA-----------------------------------------GGAGG------A--GC--------------------------------------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.........................................................................................................................................................................................................GAAGGTCCAT---TTGGTGTCC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------CGCCTGAGCATGCGCAAC.............2011.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTACTGTGCCGTT------GTTTC..............................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGCAACCTGAAGAAGA...1911.00100000010000
.........................................................................................................................................................................................................GAAGGTCCAT---TTGGTGTCC-GGGTGCCC---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
.................................................AGTAAGTGA--GCCCCGCTGA-----------------------------------------GG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.............................GTACCAGGGGCGCATATTCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.................GCTGATGATCGAGTACCAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--------------ATCG-C-TTTGCTAACCACTCGAA-------................................................................................................................................................................................................................................................................................................................................2411.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGAT-CCCAATCCCGATC-ACG--------TCGCC.............................................................2811.00100100000000
......................TGATCGAGTACCAGGGGCGCATATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..................CTGATGATCGAGTACCAGGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.................................................................................................................AGG------A--GC--------------------------------------------------AGCC-CCAGTCTCC-----CAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................ATCCCAGC-------------------CGCTTAT----------GCCTCATCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
....................GATGATCGAGTACCAGGGGCGCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGCACCGCCGATCGCC.......................................2011.00101000000000
...................TGATGATCGAGTACCAGGGGCGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...........................................................................................................................................................................................................................GTCC-GGGTGCCC---GCTACT-----------------------------------------------------------------------------------------------------------------------GTTACCCA---CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGC------CGCCTGAGCATGCGC................2111.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTT------GTTTCG--------------ATCG-C-TTT.....................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCG--------------ATCG-C-TTTGCTAACCACTCGA........................................................................................................................................................................................................................................................................................................................................2511.00101000000000
............GTGAAGCTGATGATCGAGTACCAGGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.......................................................................................................................................................................................................GTGAAGGTCCAT---TTGGTGTCC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----ACC---GCTCACCTACTGTGC.............................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGC------CGCCTGAGCATGCGCAACCT...........2611.00101000000000
....................GATGATCGAGTACCAGGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............GAAGCTGATGATCGAGTACCAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCAA----ACC---GCTCACCTACTGTGCCGT..........................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
droEre2
CTGGCCGACTGCGTCAAGGTGATGATCGAGTACCAGGGGCGCATATTCGAGTAAGTGA--GCCCCGCTGA-----------------------------------------GG---------A--GC--------------------------------------------------AGCC-CCAGTCTCC-----CAGGTGAAGGTCCAT---TTGGTGTCC-GGGCGCCC---GCTACT-----------------------------------------------------------------------------------------------------------------------GTTACCTA---CA--------AACCCGAATCCCAGC-------------------CGCTTAT----------GCCTCATCCAA----ACC---GCTCACCTACTGTGCCGTT------GTTTCG--------------AACG-C-TTTGCTAACCACTCGAA-------ATCC----------------------------------TGAACCTGA------ACCC------GAA---------C---------------CCACTGTACCTGCCACACC--A--------------------------------------------------------------------------------------ATCCC---CA--TTCCCAACGATTCCGAT-CCCAATCCCGACC-ACG--------TCGTCTACAGATGCACCGCCGATCGCCGC------CGCCTGAGCATGCGCAACCTGAAGAAGACTCSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
........................ATCGAGTACCAGGGGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGAA-------ATCC----------------------------------TGAACCTGA------ACCC------.................................................................................................................................................................................................................................................................2311.0011000000
.....CGACTGCGTCAAGGTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
....................GATGATCGAGTACCAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.................................................................................................................................................................................................................AT---TTGGTGTCC-GGGCGCCC---GCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACC--A--------------------------------------------------------------------------------------ATCCC---CA--TTCCCAAC.....................................................................................................2011.0010100000
................AGGTGATGATCGAGTACCAGGGGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATGCACCGCCGATCGCCGC------CGC............................2611.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCG--------------AACG-C-TTTGCTAACCACT...........................................................................................................................................................................................................................................................................................................................................2311.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGA------ACCC------GAA---------C---------------CCACTGTACCTG.........................................................................................................................................................................................................................2411.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTACAGATGCACCGCC..............................................1911.0010001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT-CCCAATCCCGACC-ACG--------TC................................................................2111.0010000010
............GTCAAGGTGATGATCGAGTACCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
..................................................GTAAGTGA--GCCCCGCTGA-----------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
......................................................................................................................................................................................................................TTGGTGTCC-GGGCGCCC---GCTACT-----------------------------------------------------------------------------------------------------------------------GT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--TTCCCAACGATTCCGAT-C..........................................................................................2011.0011000000
.......................................CGCATATTCGAGTAAGTGA--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
droSec2
CTGGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGGCGCATATTCGAGTAAGTGCCAGCCCCGCTGA-----------------------------------------GGAGG------A--GC--------------------------------------------------AGCCCCCAGTCTCC-----CAGGTGATGGTCCAT---TTGGTGTCC-GGGCGCCCGCCGCTACT-----------------------------------------------------------------------------------------------------------------------GTTACCCA---CAA-------AACCCGAATTCCCGC-------------------CGCTTAC----------GTCTCATCCAAACAAACC---GCTCACCTACTGTGCTGTT------GTGTCG--------------AACG-C-TTTGCTAACCACTCGAAAACCGAAATCC----------------------------------TCAACCTGA------ACC-------------------C---------------CCACTGTACCTGCCACACC--TATACCCA----------------------------------------------------------------CTCCCGA------------------------------ATCCATT-TCCAATCCCGATC-ACG--------TCGTCTACAGATGCACCGCCGATCGCCGC------CGCCTGAGCATGCGCAACCTGAAGAAGACTCSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTACTGTGCTGTT------GTGTCG--------------AAC............................................................................................................................................................................................................................................................................................................................................................2512.0020200
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTGCTGTT------GTGTCG--------------A..............................................................................................................................................................................................................................................................................................................................................................1811.0011000
....................GATGATCGAGTACCAGGGGCGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAGATGCACCGCCGA............................................1811.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCG--------------AACG-C-TTTGCTAACCACTCGA........................................................................................................................................................................................................................................................................................................................................2411.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTACTGTGCTGTT------GTGTCG--------------...............................................................................................................................................................................................................................................................................................................................................................2211.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGCAACCTGAAGAAGA...1911.0010100
........................................................GCCAGCCCCGCTGA-----------------------------------------GGAGG------A--G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
........................................................GCCAGCCCCGCTGA-----------------------------------------GGAGG------A--GC--------------------------------------------------AG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCGCCGATCGCCGC------CGCCTGAGCAT....................2811.0010010
droSim2
CTGGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGGCGCATATTCGAGTAAGTGCGAGCCCCGCTGA-----------------------------------------GGAGG------A--GC--------------------------------------------------AGCCCCCAGTCTCC-----CAGGTGATGGTCCAT---TTGGTGTCC-GGGCGCCCGCCGCTACT-----------------------------------------------------------------------------------------------------------------------GTTACCCA---CAA-------ACCCCGAATTCCCGC-------------------CGCTTAC----------GTCTCATCCAA----ACC---GCTCACCTACTGTGCCGTT------GTGTCG--------------AACG-C-TTTGCTAACCACTCGAAAACCGAAATCC----------------------------------TCAACCTGA------ACCCGTTATCGAA-C------CC---------------CCACTGTACCTGCCACACC--TATACCCACTC---------------------------------------------------CCGAT--TCGCTCCCGA------------------------------ATCCGTT-TCCAATTCCGATC-ACG--------TCGTCTACAGATGCACCGCCGATCGCCGC------CGCCTGAGCATGCGCAACCTGAAGAAGACTCSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
....................GATGATCGAGTACCAGGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGATCGCCGC------CGCCTGAGCATG...................2511.00100000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAATCC----------------------------------TCAACCTGA------ACCC.......................................................................................................................................................................................................................................................................2111.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT------GTGTCG--------------AACG-C-TTTGCTAACC..............................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGATC-ACG--------TCGTCTACAGATG.....................................................2411.00110000000000000000
...............AAGCTGATGATCGAGTACCAGGGGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000001000
................AGCTGATGATCGAGTACCAGGGGCGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTACTGTGCCGTT------GTGTCG--------------AACG-C-........................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.........TGCGTCAAGCTGATGATCGAGTACCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
....................GATGATCGAGTACCAGGGGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCATGCGCAACCTGAAGAA.....2311.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAATCC----------------------------------TCAACCTGA------ACCCGT.....................................................................................................................................................................................................................................................................2311.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGAGCATGCGCAACCTGAAGAA.....2611.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAA-C------CC---------------CCACTGTACC...........................................................................................................................................................................................................................1811.00100100000000000000
dm3
CTGGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGGCGCATATTCGAGTAAGTGCGAGCCCCGCTGA-----------------------------------------GGAGG------A--AC--------------------------------------------------AGCC-CCAGTCTCC-----CAGGTGATGGTCCAT---TTGGTGTCC-GGGCGCCCGCCGCTACT-----------------------------------------------------------------------------------------------------------------------GTTACCCA---CAA-------AACCCGAATCCCAGC-------------------CGCTTAC----------GTCTCATCCAA----ACC---GCTCACCTACTGTGCCGTT------GTGTCG--------------AACG-C-TTTGCTAACCACTCGAAATCCGAAATCC----------------------------------TCAACCCGA------AACC------GAA-C--A---CC---------------CCACTGTACCTGCCACACCTCTATACCCATTC---------------------------------------------------CCGAT--TCGCTCCCGA------------------------------ATCTGTT-TCCAATCCCGATC-ACA--------TCGTCTACAGATGCACCGCCGATCGCCGC------CGCCTGAGCATGCGCAACCTAAAGAAGACTCSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGCACCGCCGATCGCCGC------...............................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCG--------------AACG-C-TTTGCTAACCACTCGAA.......................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTT-TCCAATCCCGATC-ACA--------TCGTC.............................................................2714.0040000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGAAATCC----------------------------------TCAACCCGA------AACC------GAA-.............................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............GTCAAGCTGATGATCGAGTACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGTGCCGTT------GTGTCG--------------AACG-C-........................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
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droEug1
CTGGCTGACTGCGTCAAACTGATGATCGAGTACCAGGGGCGTATATTCGAGTAAGTGA--GCCCCATAAA-----------------------------------------GGAGG------A--GG--------------------------------------------------ACCCCCACGTCTCC-----CTGGTGAAGGTGCA----TTGGTTTCC-GGCCGACC---GCTACT-----------------------------------------------------------------------------------------------------------------------GTATTCCCCAACAA-----AAACCCCAAATCCCAGC-------------------TGCTTAA----------ATCTCATCAAA----ACT---GATCACCC-TTGTGCCGTT------GTCTCG--------------AACG-C-TTTGCTAACCACACGAA-------ATCC----------------------------------TGAACCTGAACCTGAATCC------GAA---------C---------------CCACTGTACCTGCACCTCC--A--------------------------------------------------------------------------------------ATCCT--CCA--TTCCCAAC-------------------GATC-CCC--------TCGTCTACAGATGCACCGCAGATCGCCGC------CGCCTGAGCATGCGCAACCTGAAGAAGACTCSizeHit CountTotal NormTotal
No Reads
droBia1
CTGGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGTCGCATATTCGAGTAAGTGA--GTCCCGTTGC-----------------------------------------GGAGG------A--GC--------------------------------------------------AGCCCCCGGTCTCC-----CTGGTGAAGGTGCA----TTGGTGTCC-GGCCGCCC---GCTACT-----------------------------------------------------------------------------------------------------------------------GTTCCCCC---C----------ACCCGAGTCCCAGC-------------------CGCTTGC----------GCCTCATCCAA----ACCCGTGCTCATCC-CTGTGCCGTT------GTCTCG--------------AAAG-C-TTTGCTAACCACACGAA-------CTCC----------------------------------TGAACCCGT------ACCC------GCA---------C---------------CCACTGTACCTGCAACACC--A--------------------------------------------------------------------------------------ATCCC---CC--ACCCCCAC-------------------G-TC-CCG--------TCGTCTACAGATGCACCGCCGACCGCCGC------CGCCTGAGCATGCGCAACCTGAAGAAGACCCSizeHit CountTotal NormTotal
No Reads
droTak1
CTGGCCGACTGCGTTAAGCTGATGATCGAGTACCAGGGTCGCATATTCGAGTAAGTCA--GC-----TGG----T------------------------------------GGAGG------AGAG---------------------------------------------------GGCT-CCCGTCTCC-----CTGGTGAAGGTGC----------------------C---GCTACTTTCCGCC----------------------------------------------------------------------------------------------------------------GTTTCCCC-G-AAAAACCCAAACAAAGAATCCAAGC-------------------TGCTTGC----------GCCTCATCCAA----AAC---GTT-------TGTGCCGTTAT----GCCTCG--------------AAAG-C-TTTGCTAACCACACGTA-------ATCC----------TGAAC-TCCTGA---ATC------CCCA-CCGAACCTGAACCT------GAA---------C---------------CCACTGTACCTGCAACTCC--A--------------------------------------------------------------------------------------ATCCC-----------------------------------------C--------CCATCTACAGATGCACCGCCGATCGCCGC------CGTTTGAGCATGCGCAACCTGAAGAAGACTCSizeHit CountTotal NormTotal
No Reads
droEle1
CTGGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGGCGGATATTCGAGTAAGTGGAG--GT----GG-AGGT------------------------------GGA---GGAGG---AGGA--GGAGCCCCAGCCCCAGCCC------------------CAGTTCGC--------GTT-CCCGTTTAC-----CTGGTGAAGGTGCA----TTGGTTTCCTGGCCGCCC---ACTACT-----------------------------------------------------------------------------------------------------------------------GTTTTCCC---CAATGTCCGAATCCCGAATCCCAGCTG-----------------CGCTTATACACCTCAATGCCTCATCCAA----ACC---GCTCATCC-CTGTGCCGTT------GTCTCG--------------AACG-C-TTTTCTAACCACTCGAA-------CTC---------------------GA---ATGCC----CGAACCTGA------ACAC------CAATCCCCAACAC---------------------------------C--A--------------------------------------------------------------------------------------ATTCC---GA--TCCCCAAC-------------------GATC-CCG--------TCGTCTACAGATGCACCGCCGATCGCCGCCAGCGTCGTCTGAGCATGCGCAACCTGAAGAAGACTCSizeHit CountTotal NormTotal
No Reads
droRho1
TTAGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGGCGCATATTCGAGTAAGTGA--GCCCCATAAA-----------------------------------------GGAGGAGGAGGA--GGAGCCCCAGCCC--------------------------------------CAGC--CCCGTCTCC-----CTGGTGAAGGTGCA----TTGGTTTCC-GGCCGCCC---GCTACT-----------------------------------------------------------------------------------------------------------------------GTTTCCC------A-------AACCCGAATCCTAGC-------------------TGCTTATGTAC------GCCTCATCCAA----ACC---GCTCATCC-CTGTGCCGTT------GTCTCG--------------AACG-T-ATTGCTAACCACACGAA-------ATCC----------------------------------TGAACCTGA------ACCC------AA--C------AC---------------CCTCTGTACCTGCTACCCG--A--------------------------------------------------------------------------------------ATCCC---TA--TTCCCAAC-------------------GATC-CCG--------TCGTCTACAGATGCACCGCCGATCGCCGCCAGCGTCGTCTGAGCATGCGCAACCTGAAGAAGACTCSizeHit CountTotal NormTotal
No Reads
droFic1
CTGGCCGACTGCGTCAAGCTGATGATCGAGTACCAGGGGCGGATATTCGAGTAAGTGA--GCCCCGTAGA-----------------------------------------GGAGCAGG---A--GG--------------------------------------------------AT-C-CCCGTCTCT-----TTGGTGAAGGTGCA----TTGGTTTCC-GGCCGCCC---GCTACT-----------------------------------------------------------------------------------------------------------------------GTTCCCC------A-------AACCCGAATCCCAGC-------------------TTCTTAA----------GTCTCATCCGA----ATC---GCTCTCCC-CTGTGCCGTT------GTCTTG--------------ATCG-C-TTTGCTAACCACAAGAA-------ATCC----------------------------------TGAACCCGA------ACCC------GAA---------C---------------CCACTGTACCTGCCACTCC------------------------------------------------------------------------------------------TTCC---CA--ATCCCAAC-------------------GATC-CCG--------TCGTCTACAGATGCACCGCCGATCGCCGCCTGCCTCGACTGAGCATGCGCAACCTGAAGAAGACTCSizeHit CountTotal NormTotal
No Reads
droKik1
CTGGCGGACTGCGTCAAGCTGATGATCGAGTACCATGGTCGCATATTCGAGTGAGTGA--GCCAG---------------------------------------------------------------------------GCCC------------------CA--TTGA--------ATACCCGA---TC-----CTGGTGATGGTGCA----TTGGTTCCT-T----------------------------------------------------------------------------------------------------------------------------------------------------A-------GTCCCGAATCCCAGC-------------------CGCTTTT----------GCTCCATC----------------------TTGTGCTGTTGTT---GTCTTTCTCTGGAACGAACAAATG-C-TTTGCTAACCAC--GAC-------ATCC----------CCAAC------------T------TCAACCTGA------ACCT------GAA---------C----------------CTCTGTACCTGTACCCTT--T-------------------------------------------------------------G--CCCCATG--------------TATCCCCCCCACCTTCCCATC-------------------GATCCCCA--------TCGCCTGCAGATGCACCGCCGATCGCCGCCTGCGCCGTCTGAGCGTTCGCAACCTGAAGAAGACACSizeHit CountTotal NormTotal
No Reads
droAna3
CTGGCCGACTGCGTCAAGCTGATGATAGAGTACCACGGGAGGATTTTCGAGTAAGTGAAG--CAACCCGA-----------------------------------------GCCGA------G--GT----C----------------------------------------GTCCC--TCCCCTCCCGATGGTGATTGGTGATGGTGCT----TTGCTTCCC-ACTCCGCT---GCTCCC-----------------------------------------------------------------------------------------------------------------------GTTC-------------------------------------------------------------------------------------------TCGCCT-CTGTGTTATTGTGGTCGTCTTT----G---------AA-GTTTCTTGCTAAACCACC----------ATTC----------TGAATATTCC--------------GAAACTCGA------ACCC------GT------------------------------CCTGTTCCCAACCCC--C--------------------------------------------------------------------------------------ATCCT--CCA--CTCCC-AC----------GTC------GATC-C-----------AATCTACAGAAACACCGCCGATCGCCGCCACCGTCGCCTGAGTGTCCGGAACCTGAAGAAGACGCSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
...........................................................................................................................................................................................CGATGGTGATTGGTGATGGTGCT----T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000
....................GATGATAGAGTACCACGGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.........................................................................................................................................................................................................GATGGTGCT----TTGCTTCCC-ACTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.............................GTACCACGGGAGGATTTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.........................TAGAGTACCACGGGAGGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
droBip1
CTGGCGGACTGCGTCAAGCTGATGATCGAGTACCATGGCCGTATTTTCGAGTAAGTGAAG--CAACC-CA-----------------------------------------GCAGCC--------CG------------------------------------A--T-GATGGT---------------GA-----TTGGTGATGGTGCT----TTGCTTCCC-CCGCCCTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------ATCC----------------------------------------------------------------CGCCT-CTGTGTTATTGTGGTCGTCTTA--------------AAGT-A-ACTGCCAACA-----TA------------------ATCTGAATATCCC--------------GAAACTCGA------TCCC------GCA---------C---------------CC----TACCCACA-----------------------------------------------------------------------------------------------------------TCCCATC-------------------GCTCCACGCTCCAAATACATCTACAGAAACACCGCCGATCGCCGACATCGTCGCTTGAGTGTCCGGAATCTGAAGAAGACGCSizeHit CountTotal NormTotal
No Reads
dp5
CTGGCCGATTGCGTCAAGCTGATGATCGAGTACCATTCGCGCATATTCGAGTAAGTGATGTCCCCACTGA-----------------------------------------GGGTG--------------------------------------------------------GTGCCAGCCCCCTTCCGAT-----TCGGTGATGGTGTGTATATTGGTTCCT-AGCCGCAG-T--CT---TCACGCCGCCTCCCACCCCGCACCGCACCGCAGTA-------CGCAGTACATCCCCGTCCGCCTACGCCTCTAGCTGCTTGTCTG----------------------------------------C------C-------CACCCATCCCCCAA---------------------------CCACTTG--------------------------------AATGTCTCGTT------GTGTCA--------------AGAG-T-TATGCTAACCTC-CGA--------ATCCTCCTACAATCC---------GA---ATC------CAAACCTGAACCTGAACCT------GAA---------C---------------CCACTGTACCTGCACCCTC--G----------------------------------------------------------------ATCCTTGATCCCTGATCCCCCAA-CC--------------------------TACAA----------------------TCCTACAGATGCACCGCCGACCGACGCCTGCATCGCCTGAGTATGCGAAACTTGAAGAAGACGCSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACCTGAACCT------GAA---------C---------------CCACTGTACC...........................................................................................................................................................................................................................2712.0020000000200
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT------GTGTCA--------------AGAG-T-TATGCTAACC..............................................................................................................................................................................................................................................................................................................................................2411.0010010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCT------GAA---------C---------------CCACTGTACCTGCACCCTC--................................................................................................................................................................................................................2611.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGCCGACCGACGCCTGC.................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------AATGTCTCGTT------GTGTCA--------------AGA............................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......ATTGCGTCAAGCTGATGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
CTGGCCGATTGCGTCAAGCTGATGATCGAGTACCACTCGCGCATATTCGAGTAAGTGATGTCCCCACTGA-----------------------------------------GGGTG--------------------------------------------------------GTGCCAGCCCCCTTCCGAT-----TCGGTGATGGTGTGTATATTGGTTCCT-AGCCGCAG-T--CT---TCACGCCGCCTCCCACCCCGCACCGCACCGCAGTACGCAGTACGCAGTACATCCCCGTCCGCCTACGCCTCTAGCTGCTTGTCTG----------------------------------------C------C-------CAACCATCCCCCAA---------------------------CCACTTG--------------------------------AATGTCTCGTT------GTGTCG--------------AATG-T-TATGCTAATCTC-CGA--------ATCCTCCTACAATCC---------GA---ATC------CAAACCTGA------ACCT------GAA---------C---------------CCACTGTACCTGCACCCTC--G----------------------------------------------------------------ATCCTTGATCCCTGATCCCCCAA-CC--------------------------TACAA----------------------TCCTACAGATGCACCGCCGACCGACGCCTGCATCGCCTGAGTATGCGAAACTTGAAGAAGACGCSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTACCTGCACCCTC--G----------------------------------------------------------------ATCCTT.........................................................................................................................................2411.001010000
droWil2
CTTGCCGATTGTGTTAGGATCATGATCGAGTACAAGAGTCGGATATTTGAGTAAGTTG--GATCG----A-----------------------------------------AAACA------AAACG--------------------------------------------------AT-A----ACCAAG-----ATGGTGATGGTTC---------------------CTGCCACTGCAATCCGCC-----CAACCCCCTACAGTCCAGCATCA---AATTCC---CACATCCCTT---CCCAAAGCTTCTACATGGTCGTCTACGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCTCGATTA--A------T-------TATTGATCCCTTAA---------------------------CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------TCTTTGTACCTGTCATATT--TACAATTTATATTGCTTTATTCATAACTATATATATGTATCTATATAAATGTATGTATATACCCGTC--CTATTACCTTATCCATGTA-C----------------------TCCTCCTCA----------------------TCTATATAGATGCACAGCCGATCGTCGT------CGCATCAGCGTTAAGAACCTAAAGAAGACACSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
..TGCCGATTGTGTTAGGATCATGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200020
............GTTAGGATCATGATCGAGTACAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00210010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCACAGCCGATCGTCGT------CGCAT..........................2511.00100100
.......................................................................................................................................................................................................................................................................................................................CTACATGGTCGTCTACGTCGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCCGATCGTCGT------CGCATCAGCGT....................2611.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCGTTAAGAACCTAAAGA......2211.00100100
...........................................................................................................................................................................................................................................................................................................................ATGGTCGTCTACGTCGTCGTCGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
.............................GTACAAGAGTCGGATATTTGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.........................................GATATTTGAGTAAGTTG--GATCG----A-----------------------------------------AAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCCGATCGTCGT------CGCATC.........................2111.00100100
...............................................................................................................................................................................................................................................................................................................................TCGTCTACGTCGTCGTCGTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
.........................................................................................................................................................................................................................................................................................................................................................................TTA--A------T-------TATTGATCCCTTAA---------------------------CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------T....................................................................................................................................................................................................................................2311.00100010
..........................CGAGTACAAGAGTCGGATATTTGAGTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
...........................................................................................................................................................................................................................................................................................................................ATGGTCGTCTACGTCGTCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
.......ATTGTGTTAGGATCATGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..................................................................................................................................................................................................................................................................................CA---AATTCC---CACATCCCTT---CC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................T-------TATTGATCCCTTAA---------------------------CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------TCTTT................................................................................................................................................................................................................................2311.00101000
.......................................................................................................................................................................................................................................................................................................................CTACATGGTCGTCTACGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.......ATTGTGTTAGGATCATGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..............................................................................................................................................................................................................................................................................................................................................................................A------T-------TATTGATCCCTTAA---------------------------CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------TC...................................................................................................................................................................................................................................2111.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCGTTAAGAACCTAA.........2011.00100100
...................................................................................................................................................................................................................................................................................................................................................GTCGTCGTCGTCGTCGTCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
.............................................................................................................................................................................................................................................................................................................................................GTCGTCGTCGTCGTCGTCGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
droVir3
CTGGCCGATTGTGTGAGGCTCATGATCGAGTACCAGGGTCGCATATTCGAGTAAGTGGAG--CG-----AGCGCCCCCCACCCCCACCCCCCTTCAATCACGCAAAAAAAAAAAAA------A--GA--------------------------------------------------AGCT-TTTGTACCT-----GTGGTGCTGGTATCA---TTGGTGTTG-GCTCGTA----AAGATC----GTT----------------------------------------------------------------------------------------------------------------GTTT-------------------CCCGGCTCTAAGA-------------------TGCTTCC----------GATAT-------------------------GTATAAAGTT------GTCTCG--------------AACT-TGTTTGCTAATTATTCA----------CTT----------CGAACAATACCAAAAATTCCCCAATGAAATCAA------ATCC----------------------------------CAACCGTAT------CCAA------------T---------------------------------------------------CCGTA--CTGCT---------------------------CCCA------CATCA-TCT------------------------TCACACAGATGCACGGCCGATCGTCGACTGAAGCGTCTGAGTGTGCGCAACTTGAAGAAGACGCSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.TGGCCGATTGTGTGAGGCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TAAGA-------------------TGCTTCC----------GATAT-------------------------GTAT...............................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGAGTGTGCGCAACTT...........1911.001000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCGACTGAAGCGTCT..........................1811.001000000000000000000000000000000000000000000000000000000000000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCGTCTGAGTGTGCGCAA..............2211.001000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................AAGATC----GTT----------------------------------------------------------------------------------------------------------------GTTT-------------------CCCGGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-TGTTTGCTAATTATTCA----------CTT----------CGAACA............................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------CTT----------CGAACAATACCAAAAAT.................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCAACTTGAAGAAGAC..1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCAATGAAATCAA------ATCC----------------------------------CAACCGT..............................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCAAAAATTCCCCAATGA.......................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................ATCGAGTACCAGGGTCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
........TTGTGTGAGGCTCATGATCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........TGTGTGAGGCTCATGATCGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-TCT------------------------TCACACAGATGCACGG................................................2111.001000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................................................................................................................CTGGTATCA---TTGGTGTTG-GCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGTCGACTGAAGCGTCTGAGT......................2411.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTAATTATTCA----------CTT----------CGA...............................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAAGCGTCTGAGTGTGCG.................2111.001000000001000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCG--------------AACT-TGTTTGCTAATTATTCA----------CT.............................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000100000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT---------------------------CCCA------CATCA-TCT------------------------TCACACA.........................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCGTCTGAGTGTGC..................1811.001000000010000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TA----AAGATC----GTT----------------------------------------------------------------------------------------------------------------GTTT-------------------CCCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
.......ATTGTGTGAGGCTCATGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGATCGTCGACTGAAG...............................1911.001000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CTAAGA-------------------TGCTTCC----------GATAT-------------------------GTATAAA............................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAA------ATCC----------------------------------CAACCGTAT------CCAA------------T---------------------------------------------------..................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGATGCACGGCCGATCGT........................................2111.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGAAATCAA------ATCC----------------------------------CAAC.................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GGCTCTAAGA-------------------TGCTTCC----------GAT..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
...............................ACCAGGGTCGCATATTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
CTGGCCGATTGTGTGAGGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TGCTGGTATCA---TTGGTGTTG-G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---------------------------CCCA------CATCA-TCT------------------------TCACACA.........................................................2111.001000000000000000000000010000000000000000000000000000000000000000
......GATTGTGTGAGGCTCATGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
.......................................................................................................AAAAAAAAAAAAA------A--GA--------------------------------------------------AG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000100000000000000000000000000000000000
droMoj3
CTGGCCGATTGCGTGAACCTGATGATCGAGTACCATGCGCGCATATTCGAGTAAGTGGAG--CGCCTCCA-----------------------------------------GCGGC------A--GC----CAA------GCCTAATCCAAAGCTCACTCCCCAAAA----------AGCT-TTTGTACAT-----GTGGTGCTGGT------------GTTC-GTGTTGTT---GGTATT--------------------------------------------------------------------------------------------------------------GGTATCC------CTCG---CAG-------TTCCCAGATCCCCACGGAGCTCAAGGCTCTTCGATGCTTTC----------G----AT------------------------CCTAAAGTT------GCTTCGCACTCG--------AACG----TTGCTAATTAACTA--AACCGAAATCG----------------------------------CAAACCA-A------ACC--------AA---CCCAAACCAATTCCAATCCCAATCACTGCTCCTGTCCCTGT------------T---------------------------------------------------CCGCA--TCGCT---------------------------CCCA------CTGCT-TCTACTCT------------------ATACCACAGATGCACGGCCGATCGTGGATTAAAGCGTCTCAGCGTGCGCAATCTGAAGAAGACGCSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
.............................GTACCATGCGCGCATATTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
....................................................AAGTGGAG--CGCCTCCA-----------------------------------------GCGGC------A--GC----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
......................................................GTGGAG--CGCCTCCA-----------------------------------------GCGGC------A--GC----C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
...............................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGGCTCTTCGATGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTCT------------------ATACCACAGATGCACGGCC..............................................2611.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGATCGTGGATTAAAGCGTCT..........................2411.001000001
..........GCGTGAACCTGATGATCGAGTACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCACGGCCGATCGTGGATTAAAG...............................2511.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCGTCTCAGCGTGCGC................1911.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGATCGTGGATTAAAGC..............................2011.001000001
....................................................................................................................................................................................T-TTTGTACAT-----GTGGTGCTGGT------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAGCGTCTCAGCGTGCGCAATCTGA.........2811.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTTC----------G----AT------------------------CCTAAAGTT------GCTT...............................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................................GCTGGT------------GTTC-GTGTTGTT---G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................................GTGGTGCTGGT------------GTTC-GTGTTGTT---GGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..................................................................................................................................................................CAAAA----------AGCT-TTTGTACAT-----GTGGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
....................GATGATCGAGTACCATGCGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
......GATTGCGTGAACCTGATGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
droGri2
TTGGCCGATTGCGTGAAGCTAATGATCGAGTATCAGGGTCGCATATTCGAGTAAGTGC--ACCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
........................ATCGAGTATCAGGGTCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110

Generated: 05/18/2015 at 12:54 AM