ID:

dya_1350

 Coordinate:

X:7772406-7772556 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.1 -12.0 -11.9

Flybase annnotation

exon [dyak_GLEANR_17601:5]; CDS [Dyak\GE16153-cds]; intron [Dyak\GE16153-in]

Repeatable elements

NameClassFamilyStrand
(TA)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACCGCACGTACCAAAAATCAAAAATCAAATCTCAAAAATCCGAAAAATCAAAAATATATATATATATATATATAAAAACACAACGAAATGTGTCTGCTATGCAAAACAAAACTAAAAACCAAATATTAAAACGCATCCTGCGCGAAATTCGAATCGAACCAAAAAAAAAAAAAAAAACTCGCCACATGAAACAAAAAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTT
**************************************************....((((((((....))))))))...(((((......))))).(((...)))............................((((...))))(((........))).............................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 V120
male body		 V046
embryo
 V052
head
...............................................................................................................................................................................................................CTCTCGTCCGCCGCCATGG......................... 19 0 1 2.00 2 0 1 0 1 0
........................................................................................................................................................................................................................GCCGCCATGGAACGCAACA................ 19 0 1 2.00 2 2 0 0 0 0
................................................................................................................................................................................................................................GGAACGCAACAAGACTAAGG....... 20 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................................CGCAACAAGACTAAGGAAC.... 19 0 1 1.00 1 0 0 1 0 0
.....................................................................................................................................................................................................................TCCGCCGCCATGGAACGCAAC................. 21 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................CGTCCGCCGCCATGGAACGCAAC................. 23 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................................................................................TCTCGTCCGCCGCCATGGAA....................... 20 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................TTGGGACTCTCGTCCGCCGCC............................. 21 0 1 1.00 1 0 1 0 0 0
...................................................................................................................................................................................................................CGGCCGCCGCCATGGAACGCA................... 21 1 1 1.00 1 0 0 0 0 1
.....................................................................................................................................................................................................................TCCGCCGCCATGGAACGCA................... 19 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................GACTCTCGTCCGCCGCCATGGAAC...................... 24 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................................CAACAAGACTAAGGAACGGT. 20 1 1 1.00 1 0 0 1 0 0
..............................................................................................................................................................................................................ACTCTCGTCCGCCGCCATG.......................... 19 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................GTCCGCCGCCATGGAACGCAACA................ 23 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................ATGGAACGCAACAAGACT........... 18 0 1 1.00 1 0 0 0 1 0
..........................................................................................................................................................................AAAAAAACTCGCCACATGA.............................................................. 19 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................CTTGGGACTCTCGTCCGCCGCC............................. 22 1 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................................GCCATGGAACGCAACAAGACT........... 21 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................ATGGAACGCAACAAGACTAAG........ 21 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................................................................................................TGGGACTCTCGTCCGCCGCC............................. 20 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................................................CCGCCGCCATGGAACGCAACA................ 21 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................AGGCTTGGGACTCTCGTCCGCC................................ 22 3 2 0.50 1 0 1 0 0 0
.....................................................................AGATAAAAATACAACGAAATGC................................................................................................................................................................ 22 3 16 0.06 1 0 1 0 0 0

Anti-sense strand reads

TGGCGTGCATGGTTTTTAGTTTTTAGTTTAGAGTTTTTAGGCTTTTTAGTTTTTATATATATATATATATATATTTTTGTGTTGCTTTACACAGACGATACGTTTTGTTTTGATTTTTGGTTTATAATTTTGCGTAGGACGCGCTTTAAGCTTAGCTTGGTTTTTTTTTTTTTTTTTGAGCGGTGTACTTTGTTTTTTATCAACCCTGAGAGCAGGCGGCGGTACCTTGCGTTGTTCTGATTCCTTGTCAA
**************************************************....((((((((....))))))))...(((((......))))).(((...)))............................((((...))))(((........))).............................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528802
follicle cells		 M043
female body
 M056
embryo
 V058
head
.....................................................................................................................................................................................................................AGGCGGCGGTACCTTGCGTTGTTCTGAT.......... 28 0 1 8.00 8 8 0 0 0
...........................................................................................................................................................................TTTTTTGAGCGGTGTACTTTGTTTT....................................................... 25 0 1 1.00 1 0 1 0 0
............................................TTTAGTTTTTATGTATAT............................................................................................................................................................................................. 18 1 20 0.05 1 0 0 1 0
...............................AGTTTTTAGGATTGTTAGGT........................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 X:7772356-7772606 - dya_1350 ACCGCAC-------------------GTACCAAAAATCAAAAATCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAA---------------------------------ATCAAA---------------------------A------ATATATATAT----ATATATATAT-AAAAACACAACGAAATGTGTCTGCTATGCAA-----AACA---A----AACTAAAAACCAAA--TATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCGAAATTCGAA----TCGAACCAAAA-AAA----AA------AAAAAAAACTCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTT
droEre2 scaffold_4690:13392811-13393046 + ACCGCAC-------------------GTACCAAAAA-------TCAAATCTCAAA----------------------------------AATCTC--------------------------------------------------------------------------AAAA-------------------------------------------------------------------AAAAAAATATATATAT----ACCTATATAT-AAAAACACAACGAAATGTGTCTGCTATGCAA-----AACA---A----AACTAAAAA-CAAA--TATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCGAAATTCGAA----TCGAACAAAA-----------------AAAAAAAACTCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTT
droSec2 scaffold_20:121838-121958 - TCCGCAC-------------------GTACCAAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAA---------------------------------ATCAAA---------------------------AAAA--------------------------A-AAAAACACAACGAAATGTGTTATCTAAACAA-----AACT---A---CAACTAAAAA-CAAA--TATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 x:12826652-12826899 - ACCGCAC-------------------GTACCAAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAA---------------------------------ATCAAA---------------------------AAAAAA-ATATATATA--ACTACATATATAT-AAAAACACAACGAAATGTGTCTGCTATGCAA-----AACA---A----AACTAAAAA-CAAA--TATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCGAAATTCGAA----TCGAACCAAAA-AAA------------AAAAAAAACTCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTT
dm3 chrX:13489522-13489775 - ACCGCAC-------------------GTACCAAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAA---------------------------------ATCAAA---------------------------AAAAAAAATATATATATAACTACATATATAT-AAAAACACAACGAAATGTGTCTGCTATGCAA-----AACA---A----AACTAAAAA-CAAA--TATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCGAAATTCGAA----TCGAACCAAAA-AAA----AAA-----AAAAAAAACTCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTT
droEug1 scf7180000408958:102888-103136 + ACCGCAC-------------------GTACCGAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AACA---------------------------------ACCAA----------------------------AAAA--------------------------T-AAAAACACAACGAAATGTGTCTGCATTACAA-----AA--AAAATAT-AACTAAAAA-CAAA--TATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCGAAAATCGAA----TCGAACCAAAC-----------C--------AAAAATCGC---CACATGAAA------CA----AACCGC------AAAAAAAAAAAACCAAAAA-CGAA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTT
droBia1 scf7180000302421:562905-563120 - ACCGCAC-------------------GTACCGAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AACA---------------------------------ACCAA----------------------------TAAA--------------------------T-AAAAACACAACGAAATGTGTCTGCATTGCAA-----AA----------AACTAAAAA-TAAA--TATTTA-A--------ACGCAT------------------------------------------------CC-TGCGCA-AAATCGAT----TCGAACCAAAA-ACA----------------AAAAATCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTT
droTak1 scf7180000415812:33059-33287 + ACCGCAC-------------------GTACCGAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAA---------------------------------AACAAA-----------------------------AA--------------------------T-AAAAACACAACGAAATGTGTCTGCATTGCAA--TGAAAAA---A----AACTAAAAA-------TATTAAAA--ATTAAAACGCAT------------------------------------------------CC-TGCGCGAAAATCGAT----TCGAACCAAAA-AAA----AAAC--------AAAAATCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTT
droEle1 scf7180000491006:32062-32311 + ACCGCAC-------------------GTACCGCAAA-------TCAAATCTCAAA----------------------------------AATCCGAAACCAACCA------------------------------------------------------------------------------------AAACACG---------------A---------------------------AAAA--------------------------T-AAAAACACAACGAAATGTGTCTGCATTGCAA-----TA--AAAAAATCAACTAAAAA-TAAA--TATTAAAA--------ATGCAT------------------------------------------------CC-TGCGCAAAAATCAAT----TCGAACCACAA-AAAA-AAAAACGAAAAAAAAAAATTCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGTAACAAGACTAAGGAACAGTT
droRho1 scf7180000777698:16780-17018 + ACCGCAC-------------------GTACCGAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAA-----------------------------AAAAACCAA------------------------------AA--------------------------TAAAAAACACAACGAAATGTGTCTGCATTGCAA-----AAAT---AAATAAACTAAAAA-TAAA--TATTAAAA--------ATGCAT------------------------------------------------CC-TGCGCATAAATCGAT----TCGAACCACCA-AAAA-AAAAAC----AAAAAAAAATCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTT
droFic1 scf7180000453549:140142-140381 - ACCGCAC-------------------GTACCGAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAAAAACCAAAAACCAAAAAAAAA------------ATCAA--------------------------------------------------------TATAAAAAACACAACGAAATGTGTCTGCATTGCAA-------CAA--A----AACTAAAAA-CAAAACTATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCGAAAATCGAA----TCGAACCAAAA-----------C--------CAAATTCGC---CACATGAAA------CA--------------------------------------AAAAAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTT
droKik1 scf7180000302344:1516545-1516738 + ACCGCAC-------------------GTACCACAA-------------------A----------------------------------AATCTA-----------------------------------------------------------------------------------------------------GAAAAAAAAAACC-AA---------------------------AACC--------------------------G-AAAAACACAACGCAATGTGTCTGCATCTCAA-----AA------AATCAACAACAAA-TAAA--AACTAA----------------------------------------------------------AAA------------AAAATCGATCGAATCGAA-----------------------------AAATGC---TA---------AAAACA------------------------------------AAAA-ACATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAATT
droAna3 scaffold_13248:2472262-2472469 - dan_1553 ACCGCAC-------------------GTACCAAATC-------TCAAATTTCAAA--------AATA-------AAAAAACAAAAACCAAATCCG--------------------------------------------------------------------------ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAA------------------------------------------------CC-GGATAAAAAATCGAA----TCGAATCGAACAAAATCACGATC------GAAAAAATCGC---CACATGAAA------AA----ACCAAA------AAAACAAAACAAAAAAAAA-AAAA-AAACAGCTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAGCAACT
droBip1 scf7180000396575:429065-429277 + ACCGCAC-------------------GTACCA---------------ATCTCAAATAAAAAAAAATAAAAATCAAACA-----------AATCCG--------------------------------------------------------------------------ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAA------------------------------------------------CCCGGATACAAAATCGAA----TCGAATCGACA-AAATCACGATC--------GAAAATCGC---CACATGAAC------AAAACAACCAAAAAAAAAAAAACAAAACCAACAAAAAAAAAA-AACAAGCTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAGCAACT
dp5 XL_group1e:3494050-3494282 + dps_2665 ACCACAC-------------------GTACCACAAA-------ACAAAACCA----------------------AACAAATACAAAATAAAACCG--------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------AAACACAACGAAATGTGTCTGCATC-------------------------AAAAA-CAAA--TATTAAAAAAATTAAAACAAATTCAAAAAAACCAA------AACCAAAAACAAAACAAAACAAAAAAAAAC---------------------------------------------------------TTGCACGCACATGAAAACAAAACA---------------------------------AA-AAAA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGTAACAAGACTAAGGAACAGTT
droPer2 scaffold_17:430917-431153 + ACCACAC-------------------GTACCACAAA-------ACAAAACCA----------------------AACAAATACAAAATAAAACCG--------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------AAACACAACGAAATGTGTCTGCATC-------------------------AAAAA-CAAA--TATTAAAAAAATTAAAACAAATTCAAAAAAACCAAAACCAAAACCAAAAACAAAACAAAACAAAAAAAAAC---------------------------------------------------------TTGCACGCACATGAAAACAAAACA------------------------------------AAAA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGTAACAAGACTAAGGAACAGTT
droWil2 scf2_1100000004590:4683171-4683356 + ACTGTACTTGTGCCTTCCTACATTACGTAT--------------------------------------------------------------ACGTAACCTGCCA------------------------------------------------------------------------------------AAAACCGAAAACAAAA-AACAAA---------------------------AAAA--------------------------A-AAAAACACAATGAACTGTGTCCCGAAAA----------CAA--A----AACAAAAAA-CAAA--A---AA-A--------AC----------------------------------------------------------------------------------------------------------------GCATGCACA------------------------------------------------------TATTAGTTGGGACTCTCGTCCGCCGCCATGGAACGTAACAAGACTAAGGAACAACT
droVir3 scaffold_12970:10957833-10958063 - dvi_13954 TCCACAC-------------------GTACCA------------------------------------------------------------CCGTAACCTGCAACCCCCAAA--CCACAAAT-TGTTGTTGTTGT--------TGTT--------------------TAAAA-----------------AAC-AAAAAAAAAAAAAAC-A-TACAAAAAAACACACACACACATCCAAAAAAAA-AC---------------------CAAAACACACAACGAAATGTGTCAATTAT---AAATGG------------AAAAAAAAT------------------------CGAA---------------------------------------------------------------------------------------------------------AATTGCACGCAT---------------------------------------------------------ATAGTTGGGACTGTCGTCCGCCGCCATGGAACGTAACAAGACTAAGGAACAATT
droMoj3 scaffold_6473:10393367-10393608 + TCCACAC-------------------GTACCAC------------------------------------------------------------CGTAACCTGCAACC---AAACCCCC-CAATCTGTTGTTGTTGTC--------------------------------ACAA-----------------AAA-AAAAAAAAAAAAACC-AAAACAAACAAATATCC-GATACATCCAAAAACAA-AACTCGATA------CATCCACTTAAAACACACAACGAAATGTGTCAATTAT--AA-----AATG---G----AACAAAAAT-CGAA--------------------------------------------------------------------------------------------------------------------------------AATTGCACGCAT---------------------------------------------------------ATAGTTGGGACTGTCGTCCGCTGCCATGGAACGTAACAAGACTAAGGAACAGTT
droGri2 scaffold_15203:2950827-2951054 - TCCACAC-------------------GTACCAC------------------------------------------------------------CGTAACCTGCGACC-CCAAA--CTATAAAT-TGTTGTTGTTGTAAACCACATGAAAAACAAAACCAAACAATACA-AAACAAAAAACAA-ACAAAAAAACACA---------------C---------------------------AAAA--------------------------T-AAACACACAACGAAATGTGTTATTT-T--AAAATGGAAA-------------AAAAT------------------------CGAA---------------------------------------------------------------------------------------------------------AATTGCACGCAT---------------------------------------------------------ATAGTTGGGACTGTCGTCCGCCGCCATGGAACGTAACAAGACTAAGGAACAATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
ACCGCAC-------------------GTACCAAAAATCAAAAATCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAA---------------------------------ATCAAA---------------------------A------ATATATATAT----ATATATATAT-AAAAACACAACGAAATGTGTCTGCTATGCAA-----AACA---A----AACTAAAAACCAAA--TATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCGAAATTCGAA----TCGAACCAAAA-AAA----AA------AAAAAAAACTCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGG.........................1912.00200110000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCATGGAACGCAACA................1912.00202000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACGCAACAAGACTAAGG.......2011.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAACAAGACTAAGGAAC....1911.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCCGCCATGGAACGCAAC.................2111.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGCCGCCATGGAACGCAAC.................2311.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTCCGCCGCCATGGAA.......................2011.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGACTCTCGTCCGCCGCC.............................2111.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCCGCCATGGAACGCA...................1911.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTCGTCCGCCGCCATGGAAC......................2411.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGTCCGCCGCCATG..........................1911.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGCAACA................2311.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGCAACAAGACT...........1811.00100010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAACTCGC---CACATGA...........................................................................................................1911.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAACGCAACAAGACT...........2111.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGCAACAAGACTAAG........2111.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGACTCTCGTCCGCCGCC.............................2011.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGCCATGGAACGCAACA................2111.00101000000000
droEre2
ACCGCAC-------------------GTACCAAAAA-------TCAAATCTCAAA----------------------------------AATCTC--------------------------------------------------------------------------AAAA-------------------------------------------------------------------AAAAAAATATATATAT----ACCTATATAT-AAAAACACAACGAAATGTGTCTGCTATGCAA-----AACA---A----AACTAAAAA-CAAA--TATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCGAAATTCGAA----TCGAACAAAA-----------------AAAAAAAACTCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAACGC....................2413.0030201000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGCAACAAGACTAAGGAACA...2612.0020000200
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAAC......................2212.0021001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGCCATGGAACGCAACAAGACT...........2511.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAACAAGACTAAGGAACAGT.2411.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGCCATGGAACGCAACA................2011.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAACGCAACAAGACTAA.........2311.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGCCATGGAACGCAACA................2111.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCATGGAACGCAACAAGACTAAG........2511.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAA.......................2111.0010001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGACTCTCGTCCGCCGCCA............................2311.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAACAAGACTAAGGAA.....1911.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAACGCAACA................2811.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGCAACAAGACTAAGGAAC....2511.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAACGCAACAAGACT...........1911.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGA........................2011.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAACGCAACAAGACTAAG........2211.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGTCCGCCGCCATGGAACGCAA..................2711.0010100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAACGCAACAAGACT...........2111.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGACTCTCGTCCGCCGCCA............................2111.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCATGGAACGCAACAAGACT...........2311.0010001000
droSec2
TCCGCAC-------------------GTACCAAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAA---------------------------------ATCAAA---------------------------AAAA--------------------------A-AAAAACACAACGAAATGTGTTATCTAAACAA-----AACT---A---CAACTAAAAA-CAAA--TATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droSim2
ACCGCAC-------------------GTACCAAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAA---------------------------------ATCAAA---------------------------AAAAAA-ATATATATA--ACTACATATATAT-AAAAACACAACGAAATGTGTCTGCTATGCAA-----AACA---A----AACTAAAAA-CAAA--TATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCGAAATTCGAA----TCGAACCAAAA-AAA------------AAAAAAAACTCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAACGCAACAAGACTAAGGAACA...2713.00300300000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGACTCTCGTCCGCC................................1912.00201100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTCCGCCGCCATGGAACGC....................2211.00100000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGCCGCCATGGAACGC....................2011.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAACGCAACAAGACTAAGG.......2311.00100000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAAGACTAAGGAACAGTT2211.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAACGCAACA................2811.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGACTCTCGTCCGCCGCCAC...........................2311.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAACGCAACAAGACTAAG........2211.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAAC......................2211.00100000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAACGC....................2411.00100000100000000000
dm3
ACCGCAC-------------------GTACCAAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAA---------------------------------ATCAAA---------------------------AAAAAAAATATATATATAACTACATATATAT-AAAAACACAACGAAATGTGTCTGCTATGCAA-----AACA---A----AACTAAAAA-CAAA--TATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCGAAATTCGAA----TCGAACCAAAA-AAA----AAA-----AAAAAAAACTCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
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Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAA-AAA----AAA-----AAAAAAAA..........................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
ACCGCAC-------------------GTACCGAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AACA---------------------------------ACCAA----------------------------AAAA--------------------------T-AAAAACACAACGAAATGTGTCTGCATTACAA-----AA--AAAATAT-AACTAAAAA-CAAA--TATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCGAAAATCGAA----TCGAACCAAAC-----------C--------AAAAATCGC---CACATGAAA------CA----AACCGC------AAAAAAAAAAAACCAAAAA-CGAA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTTSizeHit CountTotal NormTotal
No Reads
droBia1
ACCGCAC-------------------GTACCGAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AACA---------------------------------ACCAA----------------------------TAAA--------------------------T-AAAAACACAACGAAATGTGTCTGCATTGCAA-----AA----------AACTAAAAA-TAAA--TATTTA-A--------ACGCAT------------------------------------------------CC-TGCGCA-AAATCGAT----TCGAACCAAAA-ACA----------------AAAAATCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTTSizeHit CountTotal NormTotal
No Reads
droTak1
ACCGCAC-------------------GTACCGAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAA---------------------------------AACAAA-----------------------------AA--------------------------T-AAAAACACAACGAAATGTGTCTGCATTGCAA--TGAAAAA---A----AACTAAAAA-------TATTAAAA--ATTAAAACGCAT------------------------------------------------CC-TGCGCGAAAATCGAT----TCGAACCAAAA-AAA----AAAC--------AAAAATCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTTSizeHit CountTotal NormTotal
No Reads
droEle1
ACCGCAC-------------------GTACCGCAAA-------TCAAATCTCAAA----------------------------------AATCCGAAACCAACCA------------------------------------------------------------------------------------AAACACG---------------A---------------------------AAAA--------------------------T-AAAAACACAACGAAATGTGTCTGCATTGCAA-----TA--AAAAAATCAACTAAAAA-TAAA--TATTAAAA--------ATGCAT------------------------------------------------CC-TGCGCAAAAATCAAT----TCGAACCACAA-AAAA-AAAAACGAAAAAAAAAAATTCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGTAACAAGACTAAGGAACAGTTSizeHit CountTotal NormTotal
No Reads
droRho1
ACCGCAC-------------------GTACCGAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAA-----------------------------AAAAACCAA------------------------------AA--------------------------TAAAAAACACAACGAAATGTGTCTGCATTGCAA-----AAAT---AAATAAACTAAAAA-TAAA--TATTAAAA--------ATGCAT------------------------------------------------CC-TGCGCATAAATCGAT----TCGAACCACCA-AAAA-AAAAAC----AAAAAAAAATCGC---CACATGAAA------CA--------------------------------------AA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTTSizeHit CountTotal NormTotal
No Reads
droFic1
ACCGCAC-------------------GTACCGAAAA-------TCAAATCTCAAA----------------------------------AATCCG--------------------------------------------------------------------------AAAAAAACCAAAAACCAAAAAAAAA------------ATCAA--------------------------------------------------------TATAAAAAACACAACGAAATGTGTCTGCATTGCAA-------CAA--A----AACTAAAAA-CAAAACTATTAA-A--------ACGCAT------------------------------------------------CC-TGCGCGAAAATCGAA----TCGAACCAAAA-----------C--------CAAATTCGC---CACATGAAA------CA--------------------------------------AAAAAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAGTTSizeHit CountTotal NormTotal
No Reads
droKik1
ACCGCAC-------------------GTACCACAA-------------------A----------------------------------AATCTA-----------------------------------------------------------------------------------------------------GAAAAAAAAAACC-AA---------------------------AACC--------------------------G-AAAAACACAACGCAATGTGTCTGCATCTCAA-----AA------AATCAACAACAAA-TAAA--AACTAA----------------------------------------------------------AAA------------AAAATCGATCGAATCGAA-----------------------------AAATGC---TA---------AAAACA------------------------------------AAAA-ACATAGTTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAACAATTSizeHit CountTotal NormTotal
No Reads
droAna3
ACCGCAC-------------------GTACCAAATC-------TCAAATTTCAAA--------AATA-------AAAAAACAAAAACCAAATCCG--------------------------------------------------------------------------ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAA------------------------------------------------CC-GGATAAAAAATCGAA----TCGAATCGAACAAAATCACGATC------GAAAAAATCGC---CACATGAAA------AA----ACCAAA------AAAACAAAACAAAAAAAAA-AAAA-AAACAGCTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAGCAACTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCATGGAACGCAACA................1915.005000005
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCATGGAACGCAACAAGACT...........2414.004200002
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGCCGCCATGGAACGCAACA................2413.003200001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGCA...................2013.003300000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGCAACAAGACTAAG........2013.003100002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTCCGCCGCCATGGAA.......................1913.003100002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGCAACAAGACTAAGGAGC....2213.003111000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAACAAGACTAAGGAGCA...2113.003300000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGACTCTCGTCCGCCGCCATGGAACGC....................2912.002000002
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGCCGCCATGGAACG.....................1912.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATG..........................1812.002010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAAGACTAAGGAGCAACT2212.002020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGCAACAAGACTAAGGAGCA...2612.002100001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGACTAAGGAGCAACT1812.002020000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTCCGCCGCCATGGAAC......................2012.002110000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAAC......................2212.002011000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGCAACAAGACTAAGGAGC....2412.002100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTCCGCCGCCATGGAACGCAACA................2612.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGACTCTCGTCCGCCGCCA............................2112.002200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGCCATGGAACGCAACAAG..............2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGCCATGGAACGCAAC.................2011.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGCAACAAGACTAAGGAGCAACT2611.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGCAACAAGACTAA.........2011.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAGACTAAGGAGCAACC2111.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAACGCAACAAGACTA..........2211.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGCAACAAGAC............2711.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAACG.....................2311.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGACTCTCGTCCGCCGCCATGGAAC......................2811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGCAACAAGACTAAGGAGCAA..2411.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAACGCAACAAGACTAAGGA......2611.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAACAAGACTAAGGAGCA...2211.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGCAACA................2311.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGACTCTCGTCCGCCGCCATGGA........................2611.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGACTCTCGTCCGCCGCCATGGAA.......................2611.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAACGCAACAAGAC............2011.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGCAACAAGACTAAGGAGC....2511.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGACTCTCGTCCGCCGCCATGGAACG.....................2811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGACTAAGGAGCAAC.1811.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGCCATGGAACGCAACA................2011.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGCAACAAGACTAAGGAGCA...2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAACAAGACTAAGGAGCA...2011.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCATGGAACGCAACAAG..............2111.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGCCGCCATGGAACGCA...................2111.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGTCCGCCGCCAT...........................1811.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGC....................1911.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGCAACAAGACTAAGGA......2011.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGACTAAGGAGCAACT2011.001000010
......................................................A--------AATA-------AAAAAACAAAAACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTCGTCCGCCGCCATG..........................2011.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCCGCCATGGAACGCAACAAGACT...........2711.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGCAACAAGACTAAGGAGCAAC.2711.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCCGCCATGGAACGCAACAA...............2311.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACGCAACAAGACTAAGGAGCAAC.2611.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCCGCCGCCATGGAAC......................1911.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTCCGCCGCCATGGAACGCAACA................2711.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGTCCGCCGCCATGGAA.......................2211.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAACAAGACTAAGGAGCAACT2311.001000010
...............................................................AATA-------AAAAAACAAAAACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGGAACGCAACAAGACTAAG........2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGTCCGCCGCCATGG.........................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACGCAACAAGACTAAGGAGCA...2411.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAACGC....................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGACTCTCGTCCGCCGCCATGGAAC......................2711.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGCAACAAGACTAA.........1911.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGCAACAAGACT...........1811.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGACTAAGGAGCAACT1911.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTCCGCCGCCATGGAACGC....................2211.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCATGGAACGCAACAAGACTAA.........2611.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGACTCTCGTCCGCCGCCATGGAA.......................2711.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTCGTCCGCCGCCA............................1811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCCGCCGCCATGGAACGCAACAAGA.............2811.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGACTCTCGTCCGCCGCCATGGAAC......................2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGCAACAAGACTAAGGAGCA...2511.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----ACCAAA------AAAACAAAACAAA....................................................................2130.331010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA------AAAACAAAACAAAAAAAAA-AAAA-A.......................................................2740.251010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AA----ACCAAA------AAAACAAAA........................................................................18190.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAAAACAAAAAAAAA-A............................................................20200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AAAACAAAACAAAAAAAAA-A............................................................21200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAAACAAAAAAAAA-AAAA-........................................................21200.051010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAACAAAAAAAAA-AAAA-........................................................20200.051010000
droBip1
ACCGCAC-------------------GTACCA---------------ATCTCAAATAAAAAAAAATAAAAATCAAACA-----------AATCCG--------------------------------------------------------------------------ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAA------------------------------------------------CCCGGATACAAAATCGAA----TCGAATCGACA-AAATCACGATC--------GAAAATCGC---CACATGAAC------AAAACAACCAAAAAAAAAAAAACAAAACCAACAAAAAAAAAA-AACAAGCTGGGACTCTCGTCCGCCGCCATGGAACGCAACAAGACTAAGGAGCAACTSizeHit CountTotal NormTotal
No Reads
dp5
ACCACAC-------------------GTACCACAAA-------ACAAAACCA----------------------AACAAATACAAAATAAAACCG--------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------AAACACAACGAAATGTGTCTGCATC-------------------------AAAAA-CAAA--TATTAAAAAAATTAAAACAAATTCAAAAAAACCAA------AACCAAAAACAAAACAAAACAAAAAAAAAC---------------------------------------------------------TTGCACGCACATGAAAACAAAACA---------------------------------AA-AAAA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGTAACAAGACTAAGGAACAGTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGACTCTCGTCCGCCGCC.............................2212.0021100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAACAAGACTAAGGAAC....1912.0020100010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGTAACAAGAC............2711.0010001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGTAACAAGACTAAGG.......2211.0010000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTAACAAGACTAAGG.......1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGTAACAAGACTA..........1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAACGTA...................2511.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGTCCGCCGCCATGGAAC......................2311.0010010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTAACAAGACTAAGGAA.....2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGCCATGGAACGTAACA................2111.0010000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGACTCTCGTCCGCCGCCATG..........................2311.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGTAACAAGACTAAGGAACA...2511.0010000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCCGCCGCCATGGAACGTA...................2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAAC......................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGCCGCCATGGAACGTA...................2111.0010000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTAACAAGACTAAGGAACA...2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGTAACA................2311.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGTAACAC...............2411.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAACGTAACAAGACTAAGGAAC....2611.0010100000000
droPer2
ACCACAC-------------------GTACCACAAA-------ACAAAACCA----------------------AACAAATACAAAATAAAACCG--------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------AAACACAACGAAATGTGTCTGCATC-------------------------AAAAA-CAAA--TATTAAAAAAATTAAAACAAATTCAAAAAAACCAAAACCAAAACCAAAAACAAAACAAAACAAAAAAAAAC---------------------------------------------------------TTGCACGCACATGAAAACAAAACA------------------------------------AAAA-AAATAGTTGGGACTCTCGTCCGCCGCCATGGAACGTAACAAGACTAAGGAACAGTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAAGACTAAGGAACA...1912.002010001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCATGGAACGTAACA................1811.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGCCATGGAACGTAACA................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGTAACAAGACTAAGG.......2111.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCATGGAACGTAACA................1911.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGTAACAAGACTAAGG.......2211.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAACAAGACTAAGGAA.....1811.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAACGTAACAAGACT...........2111.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGTCCGCCGCCATGGAACGTA...................2611.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACG.....................1811.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAACGTAACAAGA.............1911.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTCCGCCGCCATGGAACGTA...................2311.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGTAACAAGACTA..........1911.001010000
droWil2
ACTGTACTTGTGCCTTCCTACATTACGTAT--------------------------------------------------------------ACGTAACCTGCCA------------------------------------------------------------------------------------AAAACCGAAAACAAAA-AACAAA---------------------------AAAA--------------------------A-AAAAACACAATGAACTGTGTCCCGAAAA----------CAA--A----AACAAAAAA-CAAA--A---AA-A--------AC----------------------------------------------------------------------------------------------------------------GCATGCACA------------------------------------------------------TATTAGTTGGGACTCTCGTCCGCCGCCATGGAACGTAACAAGACTAAGGAACAACTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAACAAGACTAAGGAAC....1914.00430010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAACAAGACTAAGGAACAACT2313.00330000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTAACAAGACTAAGGAA.....2112.00200020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGCCATGGAACGTAACAAGACT...........2612.00201010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAAC......................2212.00200020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACGTAACAAGACTAAGGAACAACT2712.00220000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGTAACA................2311.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGACTAAGGAACAACT1911.00110000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACGTAACAAGACTAAGGAAC....2311.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAAGACTAAGGAACA...1911.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGTAACAAGACTAAGGAACA...2611.00110000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTAACAAGACTAAGGAACA...2311.00110000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGCCATGGAACGTAACAA...............2111.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAA.......................2111.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGACTAAGGAACAACT1811.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCATGGAACGTAACAAGACT...........2211.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGACTCTCGTCCGCCGCCATGGA........................2511.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAACGTAA..................2611.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGACTAAGGAACAACT2011.00100010
......................................................................................................................................................................................................................................................................................................................................................A--------AC----------------------------------------------------------------------------------------------------------------GCATGCACA------------------------------------------------------TATTAG..................................................1811.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAACGTAACAAGACTAAGG.......2511.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAACGTAACAAGACTAAGGAAC....2611.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAAGACTAAGGAAC....1811.00110000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAACGTA...................2511.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAACGTAACAAGACTAAG........2411.00100010
...............................................................................................................................................................................................................................................................................AAAAACACAATGAACTGTGT.....................................................................................................................................................................................................................................................................................................2011.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAACAAGACTAAGGAACA...2011.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACGTAACAAGACTAAGGAACA...2411.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATGGAACGTAAC.................2711.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAACGTAACAAGACTAAGGAA.....2511.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAAGACTAAGGAACAACT2211.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGTAACAAGACTAAGGAA.....2411.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGTAAC.................2211.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTAACAAGACTAAGGA......2011.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTCCGCCGCCATGGA........................1811.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGTAACAAGACTAAGG.......2111.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGCCATGGAACGTAACA................2111.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGGAACGTAACAAGACTAAGGAAC....2711.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGGAACGTAACAAGACT...........2011.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTCCGCCGCCATG..........................1811.00110000
droVir3
TCCACAC-------------------GTACCA------------------------------------------------------------CCGTAACCTGCAACCCCCAAA--CCACAAAT-TGTTGTTGTTGT--------TGTT--------------------TAAAA-----------------AAC-AAAAAAAAAAAAAAC-A-TACAAAAAAACACACACACACATCCAAAAAAAA-AC---------------------CAAAACACACAACGAAATGTGTCAATTAT---AAATGG------------AAAAAAAAT------------------------CGAA---------------------------------------------------------------------------------------------------------AATTGCACGCAT---------------------------------------------------------ATAGTTGGGACTGTCGTCCGCCGCCATGGAACGTAACAAGACTAAGGAACAATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCGTCCGCCGCCATGGAACGTAACA................2815.005000000000000001003100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGCCATGGAACGTAACA................2013.003000000000000000001010000000000000000000000000000000000000000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGTAACAAGACT...........2812.002000000000000000001100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTAACAAGACTAAGGAACAAT.2512.002000000000000000001000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGTAACAA...............2412.002000000000000000001000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCGTCCGCCGCCATGGAAC......................2212.002000100000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGTAACAAGACTAAGGAAC....2412.002000000000000000001100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGTCCGCCGCCATGGAA.......................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAACAAGACTAAGGAAC....1911.001010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTAACAAGACTAAGGAAC....2011.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCATGGAACGTAACAAGAC............2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCCGCCGCCATGGAACGTAACAAGACTAAG........3311.001000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGTCCGCCGCCATGGAACGTAACAA...............2811.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTGTCGTCCGCCGCCATGGAAC......................2511.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTGTCGTCCGCCGCCATGGAACGTAACA................3111.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTGTCGTCCGCCGCCATGGAA.......................2411.001000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCCGCCGCCATGGAACGTAACAA...............2611.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGTAACAAGACTAAGGA......2311.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCGTCCGCCGCCATGGAACGTA...................2511.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACGTAACAAGACTAAGGAACAAT.2611.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGCCATGGAACGTAACA................2111.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAACGTAACAAGACTAAGGA......2611.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGTCCGCCGCCATGGAACGTAACA................2711.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTAACAAGACTAAGGAACA...2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGTA...................2011.001000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCCGCCGCCATGGAACGTA...................2211.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCCGCCGCCATGGAACGTAACAA...............2711.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCCGCCATGGAACGTAACAAGAC............2611.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTGTCGTCCGCCGCCATGGAACGTA...................2811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCCGCCATGGAACGTAAC.................2211.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAACGTAACAAGACTAAGGAACAATT3011.001000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACGTAACAAGACTAAGG.......2211.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCGTCCGCCGCCATGGAA.......................2111.001000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCGTCCGCCGCCATGGAACGT....................2411.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGACTGTCGTCCGCCGCCATGGAAC......................2711.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCGTCCGCCGCCATGGAACGTAAC.................2711.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGTAACAAGACTAA.........1911.001000000000000000010000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAACGTAACAAGACTAAG........2411.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGTAACAAGACTAAG........2011.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTAACAAGACTAAGGAACAATT2411.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGACTGTCGTCCGCCGCC.............................2011.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TT--------------------TAAAA-----------------AAC-AAAAAAAAAA............................................................................................................................................................................................................................................................................................................................................................................................2070.141000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................AAAAAAAAAAC-A-TACAAAA.............................................................................................................................................................................................................................................................................................................................................................................19110.091001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGACTAAGGAACT...15190.051000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................AAAT-TGTTGTTGTTGT--------TG......................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................T--------------------TAAAA-----------------AAC-AAAAAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................TGTTGTTGTTGT--------TGTT--------------------TAA.............................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
droMoj3
TCCACAC-------------------GTACCAC------------------------------------------------------------CGTAACCTGCAACC---AAACCCCC-CAATCTGTTGTTGTTGTC--------------------------------ACAA-----------------AAA-AAAAAAAAAAAAACC-AAAACAAACAAATATCC-GATACATCCAAAAACAA-AACTCGATA------CATCCACTTAAAACACACAACGAAATGTGTCAATTAT--AA-----AATG---G----AACAAAAAT-CGAA--------------------------------------------------------------------------------------------------------------------------------AATTGCACGCAT---------------------------------------------------------ATAGTTGGGACTGTCGTCCGCTGCCATGGAACGTAACAAGACTAAGGAACAGTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................AATCTGTTGTTGTTGTC--------------------------------ACAA-----------------A.........................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGACTGTCGTCCGCTGCC.............................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGCCATGGAACGTAACAAGAC............2511.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGTAACAAGACTAAGGAACA...2511.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCGTCCGCTGCCATGGAACGTAACA................2811.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTGCCATGGAACGT....................1911.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGCCATGGAACGTAACAA...............2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGACTAAGGAACAGTT1911.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCCGCTGCCATGGAA.......................1911.001000100
............................................................................................................................................................................................................................................................................TTAAAACACACAACGAAATG........................................................................................................................................................................................................................................................................................................2011.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTCGTCCGCTGCCATGGAAC......................2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGACTGTCGTCCGCTGCCA............................2311.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCGTCCGCTGCCATGGAACGTA...................2511.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGACTGTCGTCCGCTGCCAT...........................2111.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGCTGCCATGGAAC......................1811.001100000
...........................................................................................................................................................................AA-----------------AAA-AAAAAAAAAAAAACC-......................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
droGri2
TCCACAC-------------------GTACCAC------------------------------------------------------------CGTAACCTGCGACC-CCAAA--CTATAAAT-TGTTGTTGTTGTAAACCACATGAAAAACAAAACCAAACAATACA-AAACAAAAAACAA-ACAAAAAAACACA---------------C---------------------------AAAA--------------------------T-AAACACACAACGAAATGTGTTATTT-T--AAAATGGAAA-------------AAAAT------------------------CGAA---------------------------------------------------------------------------------------------------------AATTGCACGCAT---------------------------------------------------------ATAGTTGGGACTGTCGTCCGCCGCCATGGAACGTAACAAGACTAAGGAACAATTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCCGCCATGGAACGTA...................1911.00110
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAACGTAACAAGACTAAG........2411.00110
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGACTAAGGAACAATT1811.00110

Generated: 05/18/2015 at 12:41 AM